HEADER HYDROLASE/HYDROLASE INHIBITOR 15-FEB-17 5UTP TITLE CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA FAMILY 3 GLYCOSIDE TITLE 2 HYDROLASE (NAGZ) BOUND TO N-ETHYLBUTYRYL-PUGNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-HEXOSAMINIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BETA-N-ACETYLHEXOSAMINIDASE, N-ACETYL-BETA-GLUCOSAMINIDASE; COMPND 5 EC: 3.2.1.52; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 95486; SOURCE 4 GENE: NAGZ, A3203_21235, WL84_04775; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSIDE HYDROLASE, FAMILY 3, NAGZ, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.VADLAMANI,B.L.MARK REVDAT 4 04-OCT-23 5UTP 1 REMARK REVDAT 3 27-SEP-17 5UTP 1 REMARK REVDAT 2 07-JUN-17 5UTP 1 JRNL REVDAT 1 19-APR-17 5UTP 0 JRNL AUTH G.VADLAMANI,K.A.STUBBS,J.DESIRE,Y.BLERIOT,D.J.VOCADLO, JRNL AUTH 2 B.L.MARK JRNL TITL CONFORMATIONAL FLEXIBILITY OF THE GLYCOSIDASE NAGZ ALLOWS IT JRNL TITL 2 TO BIND STRUCTURALLY DIVERSE INHIBITORS TO SUPPRESS JRNL TITL 3 BETA-LACTAM ANTIBIOTIC RESISTANCE. JRNL REF PROTEIN SCI. V. 26 1161 2017 JRNL REFN ESSN 1469-896X JRNL PMID 28370529 JRNL DOI 10.1002/PRO.3166 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2236) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 27652 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.226 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 5.2873 - 4.2030 0.97 1824 142 0.1477 0.1809 REMARK 3 2 4.2030 - 3.6735 0.98 1838 142 0.1565 0.1767 REMARK 3 3 3.6735 - 3.3385 0.99 1850 144 0.1645 0.2391 REMARK 3 4 3.3385 - 3.0996 0.99 1854 145 0.1789 0.2248 REMARK 3 5 3.0996 - 2.9172 0.99 1843 143 0.1901 0.2208 REMARK 3 6 2.9172 - 2.7713 0.99 1846 144 0.1873 0.2608 REMARK 3 7 2.7713 - 2.6508 0.99 1838 144 0.1841 0.2406 REMARK 3 8 2.6508 - 2.5488 0.99 1834 143 0.1898 0.2530 REMARK 3 9 2.5488 - 2.4610 0.99 1820 142 0.1898 0.2944 REMARK 3 10 2.4610 - 2.3841 0.98 1845 144 0.1916 0.2414 REMARK 3 11 2.3841 - 2.3160 0.98 1814 141 0.1808 0.2458 REMARK 3 12 2.3160 - 2.2550 0.98 1823 142 0.1835 0.2632 REMARK 3 13 2.2550 - 2.2000 0.98 1809 141 0.1891 0.2521 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.820 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5179 REMARK 3 ANGLE : 0.623 7042 REMARK 3 CHIRALITY : 0.072 829 REMARK 3 PLANARITY : 0.003 914 REMARK 3 DIHEDRAL : 16.720 3113 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UTP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2-6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27671 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 49.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.13700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.24900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4G6C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30-32% PEG8000, 0.1 M MES, PH 6.2-6.8, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.94500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 HIS A 133 REMARK 465 ALA A 178 REMARK 465 GLU A 179 REMARK 465 ALA A 180 REMARK 465 ASP A 181 REMARK 465 SER A 182 REMARK 465 HIS A 183 REMARK 465 VAL A 184 REMARK 465 ALA A 342 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 180 REMARK 465 ASP B 181 REMARK 465 SER B 182 REMARK 465 HIS B 183 REMARK 465 VAL B 184 REMARK 465 ALA B 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 3 OG1 CG2 REMARK 470 GLU A 58 CG CD OE1 OE2 REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 ARG A 233 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 261 NE CZ NH1 NH2 REMARK 470 ARG A 300 CD NE CZ NH1 NH2 REMARK 470 GLU A 304 OE1 OE2 REMARK 470 LYS A 320 CD CE NZ REMARK 470 GLU B 58 CG CD OE1 OE2 REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 135 CG CD CE NZ REMARK 470 ASP B 190 CG OD1 OD2 REMARK 470 LYS B 226 CG CD CE NZ REMARK 470 LYS B 243 CE NZ REMARK 470 GLU B 258 CG CD OE1 OE2 REMARK 470 GLU B 262 CG CD OE1 OE2 REMARK 470 LYS B 298 CG CD CE NZ REMARK 470 ARG B 300 NE CZ NH1 NH2 REMARK 470 LYS B 317 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1058 O HOH B 1162 2.02 REMARK 500 O ARG A 75 O HOH A 1001 2.08 REMARK 500 O HOH A 1138 O HOH A 1153 2.10 REMARK 500 O HOH A 1001 O HOH A 1122 2.12 REMARK 500 O HOH B 1111 O HOH B 1161 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1175 O HOH B 1197 1554 2.03 REMARK 500 O HOH A 1150 O HOH B 1197 1554 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 10 -163.54 -122.88 REMARK 500 ALA A 166 -154.89 -81.51 REMARK 500 GLN A 199 -65.34 -125.99 REMARK 500 ASP A 254 108.94 -47.32 REMARK 500 GLN A 286 76.90 -167.14 REMARK 500 LEU B 10 -164.35 -121.72 REMARK 500 ARG B 38 -38.08 -35.27 REMARK 500 ALA B 166 -153.88 -79.33 REMARK 500 GLN B 199 -73.82 -114.45 REMARK 500 GLU B 262 94.08 -31.55 REMARK 500 GLN B 286 82.88 -164.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1188 DISTANCE = 6.13 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8M7 A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8M7 B 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MSS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA FAMILY 3 GLYCOSIDE REMARK 900 HYDROLASE (NAGZ) BOUND TO (3S,4R,5R,6S)-3-ACETAMIDO-4,5,6- REMARK 900 TRIHYDROXYAZEPANE REMARK 900 RELATED ID: 4GNV RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA FAMILY 3 GLYCOSIDE REMARK 900 HYDROLASE (NAGZ) BOUND TO N-ACETYLGLUCOSAMINE REMARK 900 RELATED ID: 4G6C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA FAMILY 3 GLYCOSIDE REMARK 900 HYDROLASE (NAGZ) REMARK 900 RELATED ID: 5UTQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF BURKHOLDERIA CENOCEPACIA FAMILY 3 GLYCOSIDE REMARK 900 HYDROLASE (NAGZ) BOUND TO PUGNAC DBREF1 5UTP A 1 342 UNP A0A125HFC0_9BURK DBREF2 5UTP A A0A125HFC0 1 342 DBREF1 5UTP B 1 342 UNP A0A125HFC0_9BURK DBREF2 5UTP B A0A125HFC0 1 342 SEQADV 5UTP MET A -7 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP ALA A -6 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A -5 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A -4 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A -3 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A -2 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A -1 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS A 0 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP MET B -7 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP ALA B -6 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B -5 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B -4 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B -3 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B -2 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B -1 UNP A0A125HFC EXPRESSION TAG SEQADV 5UTP HIS B 0 UNP A0A125HFC EXPRESSION TAG SEQRES 1 A 350 MET ALA HIS HIS HIS HIS HIS HIS MET LYS THR THR PRO SEQRES 2 A 350 GLY PRO VAL MET LEU ASP VAL VAL GLY THR THR LEU SER SEQRES 3 A 350 ARG ASP ASP ALA ARG ARG LEU ALA HIS PRO ASN THR GLY SEQRES 4 A 350 GLY VAL ILE LEU PHE ALA ARG HIS PHE GLN ASN ARG ALA SEQRES 5 A 350 GLN LEU THR ALA LEU THR ASP SER ILE ARG ALA VAL ARG SEQRES 6 A 350 GLU ASP ILE LEU ILE ALA VAL ASP HIS GLU GLY GLY ARG SEQRES 7 A 350 VAL GLN ARG PHE ARG THR ASP GLY PHE THR VAL LEU PRO SEQRES 8 A 350 ALA MET ARG ARG LEU GLY GLU LEU TRP ASP ARG ASP VAL SEQRES 9 A 350 LEU LEU ALA THR LYS VAL ALA THR ALA VAL GLY TYR ILE SEQRES 10 A 350 LEU ALA ALA GLU LEU ARG ALA CYS GLY ILE ASP MET SER SEQRES 11 A 350 PHE THR PRO VAL LEU ASP LEU ASP TYR GLY HIS SER LYS SEQRES 12 A 350 VAL ILE GLY ASP ARG ALA PHE HIS ARG ASP PRO ARG VAL SEQRES 13 A 350 VAL THR LEU LEU ALA LYS SER LEU ASN HIS GLY LEU SER SEQRES 14 A 350 LEU ALA GLY MET ALA ASN CYS GLY LYS HIS PHE PRO GLY SEQRES 15 A 350 HIS GLY PHE ALA GLU ALA ASP SER HIS VAL ALA LEU PRO SEQRES 16 A 350 THR ASP ASP ARG THR LEU ASP ALA ILE LEU GLU GLN ASP SEQRES 17 A 350 VAL ALA PRO TYR ASP TRP LEU GLY LEU SER LEU ALA ALA SEQRES 18 A 350 VAL ILE PRO ALA HIS VAL ILE TYR THR GLN VAL ASP LYS SEQRES 19 A 350 ARG PRO ALA GLY PHE SER ARG VAL TRP LEU GLN ASP ILE SEQRES 20 A 350 LEU ARG GLY LYS LEU GLY PHE THR GLY ALA ILE PHE SER SEQRES 21 A 350 ASP ASP LEU SER MET GLU ALA ALA ARG GLU GLY GLY THR SEQRES 22 A 350 LEU THR GLN ALA ALA ASP ALA ALA LEU ALA ALA GLY CYS SEQRES 23 A 350 ASP MET VAL LEU VAL CYS ASN GLN PRO ASP ALA ALA GLU SEQRES 24 A 350 VAL VAL LEU ASN GLY LEU LYS ALA ARG ALA SER ALA GLU SEQRES 25 A 350 SER VAL ARG ARG ILE LYS ARG MET ARG ALA ARG GLY LYS SEQRES 26 A 350 ALA LEU LYS TRP ASP LYS LEU ILE ALA GLN PRO GLU TYR SEQRES 27 A 350 LEU GLN ALA GLN ALA LEU LEU SER SER ALA LEU ALA SEQRES 1 B 350 MET ALA HIS HIS HIS HIS HIS HIS MET LYS THR THR PRO SEQRES 2 B 350 GLY PRO VAL MET LEU ASP VAL VAL GLY THR THR LEU SER SEQRES 3 B 350 ARG ASP ASP ALA ARG ARG LEU ALA HIS PRO ASN THR GLY SEQRES 4 B 350 GLY VAL ILE LEU PHE ALA ARG HIS PHE GLN ASN ARG ALA SEQRES 5 B 350 GLN LEU THR ALA LEU THR ASP SER ILE ARG ALA VAL ARG SEQRES 6 B 350 GLU ASP ILE LEU ILE ALA VAL ASP HIS GLU GLY GLY ARG SEQRES 7 B 350 VAL GLN ARG PHE ARG THR ASP GLY PHE THR VAL LEU PRO SEQRES 8 B 350 ALA MET ARG ARG LEU GLY GLU LEU TRP ASP ARG ASP VAL SEQRES 9 B 350 LEU LEU ALA THR LYS VAL ALA THR ALA VAL GLY TYR ILE SEQRES 10 B 350 LEU ALA ALA GLU LEU ARG ALA CYS GLY ILE ASP MET SER SEQRES 11 B 350 PHE THR PRO VAL LEU ASP LEU ASP TYR GLY HIS SER LYS SEQRES 12 B 350 VAL ILE GLY ASP ARG ALA PHE HIS ARG ASP PRO ARG VAL SEQRES 13 B 350 VAL THR LEU LEU ALA LYS SER LEU ASN HIS GLY LEU SER SEQRES 14 B 350 LEU ALA GLY MET ALA ASN CYS GLY LYS HIS PHE PRO GLY SEQRES 15 B 350 HIS GLY PHE ALA GLU ALA ASP SER HIS VAL ALA LEU PRO SEQRES 16 B 350 THR ASP ASP ARG THR LEU ASP ALA ILE LEU GLU GLN ASP SEQRES 17 B 350 VAL ALA PRO TYR ASP TRP LEU GLY LEU SER LEU ALA ALA SEQRES 18 B 350 VAL ILE PRO ALA HIS VAL ILE TYR THR GLN VAL ASP LYS SEQRES 19 B 350 ARG PRO ALA GLY PHE SER ARG VAL TRP LEU GLN ASP ILE SEQRES 20 B 350 LEU ARG GLY LYS LEU GLY PHE THR GLY ALA ILE PHE SER SEQRES 21 B 350 ASP ASP LEU SER MET GLU ALA ALA ARG GLU GLY GLY THR SEQRES 22 B 350 LEU THR GLN ALA ALA ASP ALA ALA LEU ALA ALA GLY CYS SEQRES 23 B 350 ASP MET VAL LEU VAL CYS ASN GLN PRO ASP ALA ALA GLU SEQRES 24 B 350 VAL VAL LEU ASN GLY LEU LYS ALA ARG ALA SER ALA GLU SEQRES 25 B 350 SER VAL ARG ARG ILE LYS ARG MET ARG ALA ARG GLY LYS SEQRES 26 B 350 ALA LEU LYS TRP ASP LYS LEU ILE ALA GLN PRO GLU TYR SEQRES 27 B 350 LEU GLN ALA GLN ALA LEU LEU SER SER ALA LEU ALA HET 8M7 A 900 56 HET 8M7 B 901 56 HETNAM 8M7 N-[(2Z,3R,4R,5S,6R)-4,5-DIHYDROXY-6-(HYDROXYMETHYL)-2- HETNAM 2 8M7 {[(PHENYLCARBAMOYL)OXY]IMINO}TETRAHYDRO-2H-PYRAN-3- HETNAM 3 8M7 YL]-2-ETHYLBUTANAMIDE FORMUL 3 8M7 2(C19 H27 N3 O7) FORMUL 5 HOH *394(H2 O) HELIX 1 AA1 SER A 18 HIS A 27 1 10 HELIX 2 AA2 PHE A 36 PHE A 40 5 5 HELIX 3 AA3 ASN A 42 ARG A 57 1 16 HELIX 4 AA4 ALA A 84 ASP A 95 1 12 HELIX 5 AA5 ASP A 95 CYS A 117 1 23 HELIX 6 AA6 ILE A 137 ALA A 141 5 5 HELIX 7 AA7 ASP A 145 ALA A 163 1 19 HELIX 8 AA8 THR A 192 ASP A 200 1 9 HELIX 9 AA9 VAL A 201 GLY A 208 1 8 HELIX 10 AB1 LEU A 209 LEU A 211 5 3 HELIX 11 AB2 PRO A 228 PHE A 231 5 4 HELIX 12 AB3 SER A 232 GLN A 237 1 6 HELIX 13 AB4 MET A 257 ARG A 261 5 5 HELIX 14 AB5 THR A 265 GLY A 277 1 13 HELIX 15 AB6 GLN A 286 LEU A 297 1 12 HELIX 16 AB7 SER A 302 ARG A 311 1 10 HELIX 17 AB8 LYS A 320 ILE A 325 1 6 HELIX 18 AB9 GLN A 327 LEU A 341 1 15 HELIX 19 AC1 SER B 18 ALA B 26 1 9 HELIX 20 AC2 PHE B 36 PHE B 40 5 5 HELIX 21 AC3 ASN B 42 ARG B 57 1 16 HELIX 22 AC4 ALA B 84 ASP B 95 1 12 HELIX 23 AC5 ASP B 95 CYS B 117 1 23 HELIX 24 AC6 ILE B 137 ALA B 141 5 5 HELIX 25 AC7 ASP B 145 ALA B 163 1 19 HELIX 26 AC8 THR B 192 GLN B 199 1 8 HELIX 27 AC9 VAL B 201 GLY B 208 1 8 HELIX 28 AD1 LEU B 209 LEU B 211 5 3 HELIX 29 AD2 PRO B 228 PHE B 231 5 4 HELIX 30 AD3 SER B 232 GLN B 237 1 6 HELIX 31 AD4 MET B 257 GLU B 262 5 6 HELIX 32 AD5 THR B 265 GLY B 277 1 13 HELIX 33 AD6 GLN B 286 LEU B 297 1 12 HELIX 34 AD7 SER B 302 ARG B 311 1 10 HELIX 35 AD8 LYS B 320 ILE B 325 1 6 HELIX 36 AD9 GLN B 327 LEU B 341 1 15 SHEET 1 AA1 5 MET A 121 SER A 122 0 SHEET 2 AA1 5 LEU A 61 VAL A 64 1 O ILE A 62 N MET A 121 SHEET 3 AA1 5 THR A 30 LEU A 35 1 N VAL A 33 O LEU A 61 SHEET 4 AA1 5 VAL A 8 LEU A 10 1 N VAL A 8 O GLY A 31 SHEET 5 AA1 5 VAL A 281 LEU A 282 1 O VAL A 281 N MET A 9 SHEET 1 AA2 2 HIS A 66 GLY A 68 0 SHEET 2 AA2 2 VAL A 71 GLN A 72 -1 O VAL A 71 N GLY A 68 SHEET 1 AA3 3 GLY A 169 PHE A 172 0 SHEET 2 AA3 3 ALA A 213 PRO A 216 1 O ALA A 213 N GLY A 169 SHEET 3 AA3 3 ALA A 249 ILE A 250 1 O ALA A 249 N VAL A 214 SHEET 1 AA4 5 MET B 121 SER B 122 0 SHEET 2 AA4 5 LEU B 61 VAL B 64 1 O ILE B 62 N MET B 121 SHEET 3 AA4 5 THR B 30 LEU B 35 1 N VAL B 33 O ALA B 63 SHEET 4 AA4 5 VAL B 8 LEU B 10 1 N VAL B 8 O GLY B 31 SHEET 5 AA4 5 VAL B 281 LEU B 282 1 O VAL B 281 N MET B 9 SHEET 1 AA5 2 HIS B 66 GLY B 68 0 SHEET 2 AA5 2 VAL B 71 GLN B 72 -1 O VAL B 71 N GLY B 68 SHEET 1 AA6 3 GLY B 169 PHE B 172 0 SHEET 2 AA6 3 ALA B 213 PRO B 216 1 O ALA B 213 N GLY B 169 SHEET 3 AA6 3 ALA B 249 ILE B 250 1 O ALA B 249 N VAL B 214 SHEET 1 AA7 2 THR B 188 ASP B 189 0 SHEET 2 AA7 2 ILE B 220 TYR B 221 1 O ILE B 220 N ASP B 189 CISPEP 1 THR A 124 PRO A 125 0 7.73 CISPEP 2 LYS A 170 HIS A 171 0 2.31 CISPEP 3 PHE A 172 PRO A 173 0 -2.69 CISPEP 4 THR B 124 PRO B 125 0 5.40 CISPEP 5 LYS B 170 HIS B 171 0 2.50 CISPEP 6 PHE B 172 PRO B 173 0 0.39 CISPEP 7 GLU B 262 GLY B 263 0 -3.03 SITE 1 AC1 12 ILE A 34 ASP A 65 ILE A 137 ARG A 140 SITE 2 AC1 12 LYS A 170 HIS A 171 HIS A 175 ASP A 253 SITE 3 AC1 12 ASP A 254 MET A 257 HOH A1098 HOH A1108 SITE 1 AC2 10 ASP B 65 ILE B 137 ARG B 140 LYS B 170 SITE 2 AC2 10 HIS B 171 HIS B 175 ASP B 253 ASP B 254 SITE 3 AC2 10 MET B 257 HOH B1101 CRYST1 51.210 85.890 65.610 90.00 102.79 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019527 0.000000 0.004433 0.00000 SCALE2 0.000000 0.011643 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015629 0.00000