data_5UUF # _entry.id 5UUF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5UUF pdb_00005uuf 10.2210/pdb5uuf/pdb WWPDB D_1000226482 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5UUG unspecified PDB . 5UUH unspecified PDB . 5UUJ unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5UUF _pdbx_database_status.recvd_initial_deposition_date 2017-02-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Mullins, E.A.' 1 ? 'Eichman, B.F.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat. Chem. Biol.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 1002 _citation.page_last 1008 _citation.title 'Toxicity and repair of DNA adducts produced by the natural product yatakemycin.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/nchembio.2439 _citation.pdbx_database_id_PubMed 28759018 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mullins, E.A.' 1 ? primary 'Shi, R.' 2 ? primary 'Eichman, B.F.' 3 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 111.600 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5UUF _cell.details ? _cell.formula_units_Z ? _cell.length_a 39.173 _cell.length_a_esd ? _cell.length_b 94.607 _cell.length_b_esd ? _cell.length_c 48.167 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5UUF _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-7-methylguanine glycosylase' 28578.043 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*CP*CP*CP*AP*(ORP)P*AP*GP*CP*CP*CP*G)-3') ; 3460.235 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*CP*GP*GP*GP*CP*TP*TP*TP*GP*GP*GP*G)-3') ; 3750.425 1 ? ? ? ? 4 non-polymer syn 'yatakemycin-adenine nucleobase adduct' 814.825 1 ? ? ? ? 5 water nat water 18.015 314 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name AlkD # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPVPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDIIQIHTLPDQKDFQIIIRELWDLPEREF QAAALDIMQKYKKHINETHIPFLEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQRAAILFQLK YKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQNNELAPLSKREAIKHIKQNYGINNEKIGETL S ; ;GPVPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDIIQIHTLPDQKDFQIIIRELWDLPEREF QAAALDIMQKYKKHINETHIPFLEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQRAAILFQLK YKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQNNELAPLSKREAIKHIKQNYGINNEKIGETL S ; A ? 2 polydeoxyribonucleotide no yes '(DC)(DC)(DC)(DC)(DA)(ORP)(DA)(DG)(DC)(DC)(DC)(DG)' CCCCAXAGCCCG B ? 3 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DG)(DC)(DT)(DT)(DT)(DG)(DG)(DG)(DG)' CGGGCTTTGGGG C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 VAL n 1 4 PRO n 1 5 MET n 1 6 HIS n 1 7 PRO n 1 8 PHE n 1 9 VAL n 1 10 LYS n 1 11 ALA n 1 12 LEU n 1 13 GLN n 1 14 GLU n 1 15 HIS n 1 16 PHE n 1 17 THR n 1 18 ALA n 1 19 HIS n 1 20 GLN n 1 21 ASN n 1 22 PRO n 1 23 GLU n 1 24 LYS n 1 25 ALA n 1 26 GLU n 1 27 PRO n 1 28 MET n 1 29 ALA n 1 30 ARG n 1 31 TYR n 1 32 MET n 1 33 LYS n 1 34 ASN n 1 35 HIS n 1 36 PHE n 1 37 LEU n 1 38 PHE n 1 39 LEU n 1 40 GLY n 1 41 ILE n 1 42 GLN n 1 43 THR n 1 44 PRO n 1 45 GLU n 1 46 ARG n 1 47 ARG n 1 48 GLN n 1 49 LEU n 1 50 LEU n 1 51 LYS n 1 52 ASP n 1 53 ILE n 1 54 ILE n 1 55 GLN n 1 56 ILE n 1 57 HIS n 1 58 THR n 1 59 LEU n 1 60 PRO n 1 61 ASP n 1 62 GLN n 1 63 LYS n 1 64 ASP n 1 65 PHE n 1 66 GLN n 1 67 ILE n 1 68 ILE n 1 69 ILE n 1 70 ARG n 1 71 GLU n 1 72 LEU n 1 73 TRP n 1 74 ASP n 1 75 LEU n 1 76 PRO n 1 77 GLU n 1 78 ARG n 1 79 GLU n 1 80 PHE n 1 81 GLN n 1 82 ALA n 1 83 ALA n 1 84 ALA n 1 85 LEU n 1 86 ASP n 1 87 ILE n 1 88 MET n 1 89 GLN n 1 90 LYS n 1 91 TYR n 1 92 LYS n 1 93 LYS n 1 94 HIS n 1 95 ILE n 1 96 ASN n 1 97 GLU n 1 98 THR n 1 99 HIS n 1 100 ILE n 1 101 PRO n 1 102 PHE n 1 103 LEU n 1 104 GLU n 1 105 GLU n 1 106 LEU n 1 107 ILE n 1 108 VAL n 1 109 THR n 1 110 LYS n 1 111 SER n 1 112 TRP n 1 113 TRP n 1 114 ASP n 1 115 SER n 1 116 VAL n 1 117 ASP n 1 118 SER n 1 119 ILE n 1 120 VAL n 1 121 PRO n 1 122 THR n 1 123 PHE n 1 124 LEU n 1 125 GLY n 1 126 ASP n 1 127 ILE n 1 128 PHE n 1 129 LEU n 1 130 LYS n 1 131 HIS n 1 132 PRO n 1 133 GLU n 1 134 LEU n 1 135 ILE n 1 136 SER n 1 137 ALA n 1 138 TYR n 1 139 ILE n 1 140 PRO n 1 141 LYS n 1 142 TRP n 1 143 ILE n 1 144 ALA n 1 145 SER n 1 146 ASP n 1 147 ASN n 1 148 ILE n 1 149 TRP n 1 150 LEU n 1 151 GLN n 1 152 ARG n 1 153 ALA n 1 154 ALA n 1 155 ILE n 1 156 LEU n 1 157 PHE n 1 158 GLN n 1 159 LEU n 1 160 LYS n 1 161 TYR n 1 162 LYS n 1 163 GLN n 1 164 LYS n 1 165 MET n 1 166 ASP n 1 167 GLU n 1 168 GLU n 1 169 LEU n 1 170 LEU n 1 171 PHE n 1 172 TRP n 1 173 ILE n 1 174 ILE n 1 175 GLY n 1 176 GLN n 1 177 LEU n 1 178 HIS n 1 179 SER n 1 180 SER n 1 181 LYS n 1 182 GLU n 1 183 PHE n 1 184 PHE n 1 185 ILE n 1 186 GLN n 1 187 LYS n 1 188 ALA n 1 189 ILE n 1 190 GLY n 1 191 TRP n 1 192 VAL n 1 193 LEU n 1 194 ARG n 1 195 GLU n 1 196 TYR n 1 197 ALA n 1 198 LYS n 1 199 THR n 1 200 ASN n 1 201 PRO n 1 202 ASP n 1 203 VAL n 1 204 VAL n 1 205 TRP n 1 206 GLU n 1 207 TYR n 1 208 VAL n 1 209 GLN n 1 210 ASN n 1 211 ASN n 1 212 GLU n 1 213 LEU n 1 214 ALA n 1 215 PRO n 1 216 LEU n 1 217 SER n 1 218 LYS n 1 219 ARG n 1 220 GLU n 1 221 ALA n 1 222 ILE n 1 223 LYS n 1 224 HIS n 1 225 ILE n 1 226 LYS n 1 227 GLN n 1 228 ASN n 1 229 TYR n 1 230 GLY n 1 231 ILE n 1 232 ASN n 1 233 ASN n 1 234 GLU n 1 235 LYS n 1 236 ILE n 1 237 GLY n 1 238 GLU n 1 239 THR n 1 240 LEU n 1 241 SER n 2 1 DC n 2 2 DC n 2 3 DC n 2 4 DC n 2 5 DA n 2 6 ORP n 2 7 DA n 2 8 DG n 2 9 DC n 2 10 DC n 2 11 DC n 2 12 DG n 3 1 DC n 3 2 DG n 3 3 DG n 3 4 DG n 3 5 DC n 3 6 DT n 3 7 DT n 3 8 DT n 3 9 DG n 3 10 DG n 3 11 DG n 3 12 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 241 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene bcere0015_46090 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1396 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 14579 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'HMS174(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBG103 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 12 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP C2T7T7_BACCE C2T7T7 ? 1 ;MHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKDIIQIHTLPDQKDFQIIIRELWDLPEREFQAAA LDIMQKYKKHINETHIPFLEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQRAAILFQLKYKQK MDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPDVVWEYVQNNELAPLSKREAIKHIKQNYGINNEKIGETLS ; 1 2 PDB 5UUF 5UUF ? 2 ? 1 3 PDB 5UUF 5UUF ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5UUF A 5 ? 241 ? C2T7T7 1 ? 237 ? 1 237 2 2 5UUF B 1 ? 12 ? 5UUF 1 ? 12 ? 1 12 3 3 5UUF C 1 ? 12 ? 5UUF 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5UUF GLY A 1 ? UNP C2T7T7 ? ? 'expression tag' -3 1 1 5UUF PRO A 2 ? UNP C2T7T7 ? ? 'expression tag' -2 2 1 5UUF VAL A 3 ? UNP C2T7T7 ? ? 'expression tag' -1 3 1 5UUF PRO A 4 ? UNP C2T7T7 ? ? 'expression tag' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ORP saccharide . 2-DEOXY-5-PHOSPHONO-RIBOSE ? 'C5 H11 O7 P' 214.110 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YTA non-polymer . 'yatakemycin-adenine nucleobase adduct' ? 'C40 H34 N10 O8 S' 814.825 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5UUF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.32 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '19% w/v PEG4000, 42 mM sodium acetate, pH 4.6, 85 mM ammonium acetate, 5% v/v glycerol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-27 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'diamond(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97857 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-G' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97857 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-G _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 18.890 _reflns.entry_id 5UUF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.610 _reflns.d_resolution_low 50.000 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 41441 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 3.700 _reflns.pdbx_Rmerge_I_obs 0.053 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.500 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.253 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.062 _reflns.pdbx_Rpim_I_all 0.032 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 153245 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.610 1.670 ? ? ? ? ? ? ? 89.500 ? ? ? ? 0.487 ? ? ? ? ? ? ? ? 3.100 ? 1.073 ? ? 0.578 0.307 ? 1 1 0.867 ? 1.670 1.730 ? ? ? ? ? ? ? 98.400 ? ? ? ? 0.429 ? ? ? ? ? ? ? ? 3.500 ? 1.111 ? ? 0.505 0.264 ? 2 1 0.921 ? 1.730 1.810 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.357 ? ? ? ? ? ? ? ? 3.700 ? 1.140 ? ? 0.418 0.215 ? 3 1 0.946 ? 1.810 1.910 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.257 ? ? ? ? ? ? ? ? 3.800 ? 1.219 ? ? 0.300 0.154 ? 4 1 0.965 ? 1.910 2.030 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.182 ? ? ? ? ? ? ? ? 3.800 ? 1.377 ? ? 0.212 0.109 ? 5 1 0.979 ? 2.030 2.190 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.115 ? ? ? ? ? ? ? ? 3.800 ? 1.535 ? ? 0.135 0.069 ? 6 1 0.990 ? 2.190 2.400 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.075 ? ? ? ? ? ? ? ? 3.800 ? 1.367 ? ? 0.088 0.045 ? 7 1 0.995 ? 2.400 2.750 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.058 ? ? ? ? ? ? ? ? 3.800 ? 1.394 ? ? 0.068 0.034 ? 8 1 0.996 ? 2.750 3.470 ? ? ? ? ? ? ? 100.000 ? ? ? ? 0.042 ? ? ? ? ? ? ? ? 3.800 ? 1.298 ? ? 0.049 0.025 ? 9 1 0.997 ? 3.470 50.000 ? ? ? ? ? ? ? 99.300 ? ? ? ? 0.024 ? ? ? ? ? ? ? ? 3.700 ? 0.934 ? ? 0.028 0.015 ? 10 1 0.999 ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max 99.930 _refine.B_iso_mean 29.1679 _refine.B_iso_min 10.610 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5UUF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.6120 _refine.ls_d_res_low 36.4210 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 41372 _refine.ls_number_reflns_R_free 2014 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.4600 _refine.ls_percent_reflns_R_free 4.8700 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1554 _refine.ls_R_factor_R_free 0.1908 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1536 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.350 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB entry 3BVS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.7400 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.1700 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.6120 _refine_hist.d_res_low 36.4210 _refine_hist.pdbx_number_atoms_ligand 93 _refine_hist.number_atoms_solvent 314 _refine_hist.number_atoms_total 2797 _refine_hist.pdbx_number_residues_total 250 _refine_hist.pdbx_B_iso_mean_ligand 22.98 _refine_hist.pdbx_B_iso_mean_solvent 37.13 _refine_hist.pdbx_number_atoms_protein 1913 _refine_hist.pdbx_number_atoms_nucleic_acid 477 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2615 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.088 ? 3666 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.060 ? 387 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 377 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 15.344 ? 1449 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6119 1.6522 2541 . 128 2413 85.0000 . . . 0.3318 0.0000 0.2720 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.6522 1.6969 2865 . 141 2724 96.0000 . . . 0.2974 0.0000 0.2439 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.6969 1.7468 2940 . 152 2788 99.0000 . . . 0.2595 0.0000 0.2227 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.7468 1.8032 2993 . 145 2848 100.0000 . . . 0.2726 0.0000 0.1978 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8032 1.8677 3010 . 136 2874 100.0000 . . . 0.2269 0.0000 0.1835 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.8677 1.9424 2976 . 145 2831 100.0000 . . . 0.2154 0.0000 0.1751 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 1.9424 2.0308 2978 . 150 2828 100.0000 . . . 0.2341 0.0000 0.1693 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.0308 2.1379 3016 . 141 2875 100.0000 . . . 0.1850 0.0000 0.1556 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.1379 2.2718 3003 . 141 2862 100.0000 . . . 0.1876 0.0000 0.1426 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.2718 2.4472 3001 . 153 2848 100.0000 . . . 0.1797 0.0000 0.1434 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.4472 2.6934 3001 . 141 2860 100.0000 . . . 0.1894 0.0000 0.1449 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 2.6934 3.0829 3001 . 153 2848 100.0000 . . . 0.1672 0.0000 0.1489 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.0829 3.8835 3017 . 144 2873 100.0000 . . . 0.1767 0.0000 0.1393 . . . . . . 14 . . . 'X-RAY DIFFRACTION' 3.8835 36.4307 3030 . 144 2886 99.0000 . . . 0.1618 0.0000 0.1343 . . . . . . 14 . . . # _struct.entry_id 5UUF _struct.title ;Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing an abasic site (12-mer product complex) ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5UUF _struct_keywords.text 'DNA glycosylase, Protein-DNA complex, Alkylpurine, Bulky lesion, HYDROLASE-DNA-ANTIBIOTIC complex' _struct_keywords.pdbx_keywords HYDROLASE/DNA/ANTIBIOTIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 HIS A 6 ? ALA A 18 ? HIS A 2 ALA A 14 1 ? 13 HELX_P HELX_P2 AA2 ASN A 21 ? MET A 32 ? ASN A 17 MET A 28 1 ? 12 HELX_P HELX_P3 AA3 GLN A 42 ? THR A 58 ? GLN A 38 THR A 54 1 ? 17 HELX_P HELX_P4 AA4 ASP A 61 ? LYS A 63 ? ASP A 57 LYS A 59 5 ? 3 HELX_P HELX_P5 AA5 ASP A 64 ? ASP A 74 ? ASP A 60 ASP A 70 1 ? 11 HELX_P HELX_P6 AA6 GLU A 77 ? LYS A 90 ? GLU A 73 LYS A 86 1 ? 14 HELX_P HELX_P7 AA7 TYR A 91 ? ILE A 95 ? TYR A 87 ILE A 91 5 ? 5 HELX_P HELX_P8 AA8 ASN A 96 ? THR A 98 ? ASN A 92 THR A 94 5 ? 3 HELX_P HELX_P9 AA9 HIS A 99 ? THR A 109 ? HIS A 95 THR A 105 1 ? 11 HELX_P HELX_P10 AB1 TRP A 112 ? HIS A 131 ? TRP A 108 HIS A 127 1 ? 20 HELX_P HELX_P11 AB2 PRO A 132 ? ALA A 137 ? PRO A 128 ALA A 133 5 ? 6 HELX_P HELX_P12 AB3 TYR A 138 ? SER A 145 ? TYR A 134 SER A 141 1 ? 8 HELX_P HELX_P13 AB4 ASN A 147 ? PHE A 157 ? ASN A 143 PHE A 153 1 ? 11 HELX_P HELX_P14 AB5 TYR A 161 ? MET A 165 ? TYR A 157 MET A 161 5 ? 5 HELX_P HELX_P15 AB6 ASP A 166 ? HIS A 178 ? ASP A 162 HIS A 174 1 ? 13 HELX_P HELX_P16 AB7 GLU A 182 ? ALA A 197 ? GLU A 178 ALA A 193 1 ? 16 HELX_P HELX_P17 AB8 ASN A 200 ? ASN A 211 ? ASN A 196 ASN A 207 1 ? 12 HELX_P HELX_P18 AB9 ALA A 214 ? LYS A 223 ? ALA A 210 LYS A 219 1 ? 10 HELX_P HELX_P19 AC1 ILE A 225 ? TYR A 229 ? ILE A 221 TYR A 225 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B DA 5 "O3'" ? ? ? 1_555 B ORP 6 P ? ? B DA 5 B ORP 6 1_555 ? ? ? ? ? ? ? 1.617 ? ? covale2 covale one ? B ORP 6 O3 ? ? ? 1_555 B DA 7 P ? ? B ORP 6 B DA 7 1_555 ? ? ? ? ? ? ? 1.603 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 12 N1 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 12 O6 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 12 N2 ? ? B DC 1 C DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 11 N1 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 11 O6 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 11 N2 ? ? B DC 2 C DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N3 ? ? ? 1_555 C DG 10 N1 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 N4 ? ? ? 1_555 C DG 10 O6 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 3 O2 ? ? ? 1_555 C DG 10 N2 ? ? B DC 3 C DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 9 N1 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 9 O6 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 9 N2 ? ? B DC 4 C DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 8 N3 ? ? B DA 5 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 8 O4 ? ? B DA 5 C DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 6 N3 ? ? B DA 7 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 6 O4 ? ? B DA 7 C DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 5 N3 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 5 O2 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 5 N4 ? ? B DG 8 C DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DC 9 N3 ? ? ? 1_555 C DG 4 N1 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DC 9 N4 ? ? ? 1_555 C DG 4 O6 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DC 9 O2 ? ? ? 1_555 C DG 4 N2 ? ? B DC 9 C DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 10 N3 ? ? ? 1_555 C DG 3 N1 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 10 N4 ? ? ? 1_555 C DG 3 O6 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 10 O2 ? ? ? 1_555 C DG 3 N2 ? ? B DC 10 C DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 2 N1 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 2 O6 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 2 N2 ? ? B DC 11 C DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DG 12 N1 ? ? ? 1_555 C DC 1 N3 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DG 12 N2 ? ? ? 1_555 C DC 1 O2 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 12 O6 ? ? ? 1_555 C DC 1 N4 ? ? B DG 12 C DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id YTA _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 23 _struct_site.details 'binding site for residue YTA B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 23 PRO A 27 ? PRO A 23 . ? 1_555 ? 2 AC1 23 MET A 28 ? MET A 24 . ? 1_555 ? 3 AC1 23 TYR A 31 ? TYR A 27 . ? 1_555 ? 4 AC1 23 MET A 32 ? MET A 28 . ? 1_555 ? 5 AC1 23 GLN A 42 ? GLN A 38 . ? 1_555 ? 6 AC1 23 TRP A 113 ? TRP A 109 . ? 1_555 ? 7 AC1 23 LYS A 160 ? LYS A 156 . ? 1_555 ? 8 AC1 23 HOH E . ? HOH A 361 . ? 1_555 ? 9 AC1 23 HOH E . ? HOH A 363 . ? 1_555 ? 10 AC1 23 HOH E . ? HOH A 421 . ? 1_555 ? 11 AC1 23 DA B 5 ? DA B 5 . ? 1_555 ? 12 AC1 23 ORP B 6 ? ORP B 6 . ? 1_555 ? 13 AC1 23 DA B 7 ? DA B 7 . ? 1_555 ? 14 AC1 23 HOH F . ? HOH B 206 . ? 1_555 ? 15 AC1 23 HOH F . ? HOH B 207 . ? 1_555 ? 16 AC1 23 HOH F . ? HOH B 208 . ? 1_555 ? 17 AC1 23 HOH F . ? HOH B 215 . ? 1_555 ? 18 AC1 23 HOH F . ? HOH B 219 . ? 1_555 ? 19 AC1 23 DT C 6 ? DT C 6 . ? 1_555 ? 20 AC1 23 DT C 7 ? DT C 7 . ? 1_555 ? 21 AC1 23 DT C 8 ? DT C 8 . ? 1_555 ? 22 AC1 23 DG C 9 ? DG C 9 . ? 1_555 ? 23 AC1 23 DG C 10 ? DG C 10 . ? 1_555 ? # _atom_sites.entry_id 5UUF _atom_sites.fract_transf_matrix[1][1] 0.025528 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010109 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010570 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022330 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 PRO 2 -2 ? ? ? A . n A 1 3 VAL 3 -1 ? ? ? A . n A 1 4 PRO 4 0 ? ? ? A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 HIS 6 2 2 HIS HIS A . n A 1 7 PRO 7 3 3 PRO PRO A . n A 1 8 PHE 8 4 4 PHE PHE A . n A 1 9 VAL 9 5 5 VAL VAL A . n A 1 10 LYS 10 6 6 LYS LYS A . n A 1 11 ALA 11 7 7 ALA ALA A . n A 1 12 LEU 12 8 8 LEU LEU A . n A 1 13 GLN 13 9 9 GLN GLN A . n A 1 14 GLU 14 10 10 GLU GLU A . n A 1 15 HIS 15 11 11 HIS HIS A . n A 1 16 PHE 16 12 12 PHE PHE A . n A 1 17 THR 17 13 13 THR THR A . n A 1 18 ALA 18 14 14 ALA ALA A . n A 1 19 HIS 19 15 15 HIS HIS A . n A 1 20 GLN 20 16 16 GLN GLN A . n A 1 21 ASN 21 17 17 ASN ASN A . n A 1 22 PRO 22 18 18 PRO PRO A . n A 1 23 GLU 23 19 19 GLU GLU A . n A 1 24 LYS 24 20 20 LYS LYS A . n A 1 25 ALA 25 21 21 ALA ALA A . n A 1 26 GLU 26 22 22 GLU GLU A . n A 1 27 PRO 27 23 23 PRO PRO A . n A 1 28 MET 28 24 24 MET MET A . n A 1 29 ALA 29 25 25 ALA ALA A . n A 1 30 ARG 30 26 26 ARG ARG A . n A 1 31 TYR 31 27 27 TYR TYR A . n A 1 32 MET 32 28 28 MET MET A . n A 1 33 LYS 33 29 29 LYS LYS A . n A 1 34 ASN 34 30 30 ASN ASN A . n A 1 35 HIS 35 31 31 HIS HIS A . n A 1 36 PHE 36 32 32 PHE PHE A . n A 1 37 LEU 37 33 33 LEU LEU A . n A 1 38 PHE 38 34 34 PHE PHE A . n A 1 39 LEU 39 35 35 LEU LEU A . n A 1 40 GLY 40 36 36 GLY GLY A . n A 1 41 ILE 41 37 37 ILE ILE A . n A 1 42 GLN 42 38 38 GLN GLN A . n A 1 43 THR 43 39 39 THR THR A . n A 1 44 PRO 44 40 40 PRO PRO A . n A 1 45 GLU 45 41 41 GLU GLU A . n A 1 46 ARG 46 42 42 ARG ARG A . n A 1 47 ARG 47 43 43 ARG ARG A . n A 1 48 GLN 48 44 44 GLN GLN A . n A 1 49 LEU 49 45 45 LEU LEU A . n A 1 50 LEU 50 46 46 LEU LEU A . n A 1 51 LYS 51 47 47 LYS LYS A . n A 1 52 ASP 52 48 48 ASP ASP A . n A 1 53 ILE 53 49 49 ILE ILE A . n A 1 54 ILE 54 50 50 ILE ILE A . n A 1 55 GLN 55 51 51 GLN GLN A . n A 1 56 ILE 56 52 52 ILE ILE A . n A 1 57 HIS 57 53 53 HIS HIS A . n A 1 58 THR 58 54 54 THR THR A . n A 1 59 LEU 59 55 55 LEU LEU A . n A 1 60 PRO 60 56 56 PRO PRO A . n A 1 61 ASP 61 57 57 ASP ASP A . n A 1 62 GLN 62 58 58 GLN GLN A . n A 1 63 LYS 63 59 59 LYS LYS A . n A 1 64 ASP 64 60 60 ASP ASP A . n A 1 65 PHE 65 61 61 PHE PHE A . n A 1 66 GLN 66 62 62 GLN GLN A . n A 1 67 ILE 67 63 63 ILE ILE A . n A 1 68 ILE 68 64 64 ILE ILE A . n A 1 69 ILE 69 65 65 ILE ILE A . n A 1 70 ARG 70 66 66 ARG ARG A . n A 1 71 GLU 71 67 67 GLU GLU A . n A 1 72 LEU 72 68 68 LEU LEU A . n A 1 73 TRP 73 69 69 TRP TRP A . n A 1 74 ASP 74 70 70 ASP ASP A . n A 1 75 LEU 75 71 71 LEU LEU A . n A 1 76 PRO 76 72 72 PRO PRO A . n A 1 77 GLU 77 73 73 GLU GLU A . n A 1 78 ARG 78 74 74 ARG ARG A . n A 1 79 GLU 79 75 75 GLU GLU A . n A 1 80 PHE 80 76 76 PHE PHE A . n A 1 81 GLN 81 77 77 GLN GLN A . n A 1 82 ALA 82 78 78 ALA ALA A . n A 1 83 ALA 83 79 79 ALA ALA A . n A 1 84 ALA 84 80 80 ALA ALA A . n A 1 85 LEU 85 81 81 LEU LEU A . n A 1 86 ASP 86 82 82 ASP ASP A . n A 1 87 ILE 87 83 83 ILE ILE A . n A 1 88 MET 88 84 84 MET MET A . n A 1 89 GLN 89 85 85 GLN GLN A . n A 1 90 LYS 90 86 86 LYS LYS A . n A 1 91 TYR 91 87 87 TYR TYR A . n A 1 92 LYS 92 88 88 LYS LYS A . n A 1 93 LYS 93 89 89 LYS LYS A . n A 1 94 HIS 94 90 90 HIS HIS A . n A 1 95 ILE 95 91 91 ILE ILE A . n A 1 96 ASN 96 92 92 ASN ASN A . n A 1 97 GLU 97 93 93 GLU GLU A . n A 1 98 THR 98 94 94 THR THR A . n A 1 99 HIS 99 95 95 HIS HIS A . n A 1 100 ILE 100 96 96 ILE ILE A . n A 1 101 PRO 101 97 97 PRO PRO A . n A 1 102 PHE 102 98 98 PHE PHE A . n A 1 103 LEU 103 99 99 LEU LEU A . n A 1 104 GLU 104 100 100 GLU GLU A . n A 1 105 GLU 105 101 101 GLU GLU A . n A 1 106 LEU 106 102 102 LEU LEU A . n A 1 107 ILE 107 103 103 ILE ILE A . n A 1 108 VAL 108 104 104 VAL VAL A . n A 1 109 THR 109 105 105 THR THR A . n A 1 110 LYS 110 106 106 LYS LYS A . n A 1 111 SER 111 107 107 SER SER A . n A 1 112 TRP 112 108 108 TRP TRP A . n A 1 113 TRP 113 109 109 TRP TRP A . n A 1 114 ASP 114 110 110 ASP ASP A . n A 1 115 SER 115 111 111 SER SER A . n A 1 116 VAL 116 112 112 VAL VAL A . n A 1 117 ASP 117 113 113 ASP ASP A . n A 1 118 SER 118 114 114 SER SER A . n A 1 119 ILE 119 115 115 ILE ILE A . n A 1 120 VAL 120 116 116 VAL VAL A . n A 1 121 PRO 121 117 117 PRO PRO A . n A 1 122 THR 122 118 118 THR THR A . n A 1 123 PHE 123 119 119 PHE PHE A . n A 1 124 LEU 124 120 120 LEU LEU A . n A 1 125 GLY 125 121 121 GLY GLY A . n A 1 126 ASP 126 122 122 ASP ASP A . n A 1 127 ILE 127 123 123 ILE ILE A . n A 1 128 PHE 128 124 124 PHE PHE A . n A 1 129 LEU 129 125 125 LEU LEU A . n A 1 130 LYS 130 126 126 LYS LYS A . n A 1 131 HIS 131 127 127 HIS HIS A . n A 1 132 PRO 132 128 128 PRO PRO A . n A 1 133 GLU 133 129 129 GLU GLU A . n A 1 134 LEU 134 130 130 LEU LEU A . n A 1 135 ILE 135 131 131 ILE ILE A . n A 1 136 SER 136 132 132 SER SER A . n A 1 137 ALA 137 133 133 ALA ALA A . n A 1 138 TYR 138 134 134 TYR TYR A . n A 1 139 ILE 139 135 135 ILE ILE A . n A 1 140 PRO 140 136 136 PRO PRO A . n A 1 141 LYS 141 137 137 LYS LYS A . n A 1 142 TRP 142 138 138 TRP TRP A . n A 1 143 ILE 143 139 139 ILE ILE A . n A 1 144 ALA 144 140 140 ALA ALA A . n A 1 145 SER 145 141 141 SER SER A . n A 1 146 ASP 146 142 142 ASP ASP A . n A 1 147 ASN 147 143 143 ASN ASN A . n A 1 148 ILE 148 144 144 ILE ILE A . n A 1 149 TRP 149 145 145 TRP TRP A . n A 1 150 LEU 150 146 146 LEU LEU A . n A 1 151 GLN 151 147 147 GLN GLN A . n A 1 152 ARG 152 148 148 ARG ARG A . n A 1 153 ALA 153 149 149 ALA ALA A . n A 1 154 ALA 154 150 150 ALA ALA A . n A 1 155 ILE 155 151 151 ILE ILE A . n A 1 156 LEU 156 152 152 LEU LEU A . n A 1 157 PHE 157 153 153 PHE PHE A . n A 1 158 GLN 158 154 154 GLN GLN A . n A 1 159 LEU 159 155 155 LEU LEU A . n A 1 160 LYS 160 156 156 LYS LYS A . n A 1 161 TYR 161 157 157 TYR TYR A . n A 1 162 LYS 162 158 158 LYS LYS A . n A 1 163 GLN 163 159 159 GLN GLN A . n A 1 164 LYS 164 160 160 LYS LYS A . n A 1 165 MET 165 161 161 MET MET A . n A 1 166 ASP 166 162 162 ASP ASP A . n A 1 167 GLU 167 163 163 GLU GLU A . n A 1 168 GLU 168 164 164 GLU GLU A . n A 1 169 LEU 169 165 165 LEU LEU A . n A 1 170 LEU 170 166 166 LEU LEU A . n A 1 171 PHE 171 167 167 PHE PHE A . n A 1 172 TRP 172 168 168 TRP TRP A . n A 1 173 ILE 173 169 169 ILE ILE A . n A 1 174 ILE 174 170 170 ILE ILE A . n A 1 175 GLY 175 171 171 GLY GLY A . n A 1 176 GLN 176 172 172 GLN GLN A . n A 1 177 LEU 177 173 173 LEU LEU A . n A 1 178 HIS 178 174 174 HIS HIS A . n A 1 179 SER 179 175 175 SER SER A . n A 1 180 SER 180 176 176 SER SER A . n A 1 181 LYS 181 177 177 LYS LYS A . n A 1 182 GLU 182 178 178 GLU GLU A . n A 1 183 PHE 183 179 179 PHE PHE A . n A 1 184 PHE 184 180 180 PHE PHE A . n A 1 185 ILE 185 181 181 ILE ILE A . n A 1 186 GLN 186 182 182 GLN GLN A . n A 1 187 LYS 187 183 183 LYS LYS A . n A 1 188 ALA 188 184 184 ALA ALA A . n A 1 189 ILE 189 185 185 ILE ILE A . n A 1 190 GLY 190 186 186 GLY GLY A . n A 1 191 TRP 191 187 187 TRP TRP A . n A 1 192 VAL 192 188 188 VAL VAL A . n A 1 193 LEU 193 189 189 LEU LEU A . n A 1 194 ARG 194 190 190 ARG ARG A . n A 1 195 GLU 195 191 191 GLU GLU A . n A 1 196 TYR 196 192 192 TYR TYR A . n A 1 197 ALA 197 193 193 ALA ALA A . n A 1 198 LYS 198 194 194 LYS LYS A . n A 1 199 THR 199 195 195 THR THR A . n A 1 200 ASN 200 196 196 ASN ASN A . n A 1 201 PRO 201 197 197 PRO PRO A . n A 1 202 ASP 202 198 198 ASP ASP A . n A 1 203 VAL 203 199 199 VAL VAL A . n A 1 204 VAL 204 200 200 VAL VAL A . n A 1 205 TRP 205 201 201 TRP TRP A . n A 1 206 GLU 206 202 202 GLU GLU A . n A 1 207 TYR 207 203 203 TYR TYR A . n A 1 208 VAL 208 204 204 VAL VAL A . n A 1 209 GLN 209 205 205 GLN GLN A . n A 1 210 ASN 210 206 206 ASN ASN A . n A 1 211 ASN 211 207 207 ASN ASN A . n A 1 212 GLU 212 208 208 GLU GLU A . n A 1 213 LEU 213 209 209 LEU LEU A . n A 1 214 ALA 214 210 210 ALA ALA A . n A 1 215 PRO 215 211 211 PRO PRO A . n A 1 216 LEU 216 212 212 LEU LEU A . n A 1 217 SER 217 213 213 SER SER A . n A 1 218 LYS 218 214 214 LYS LYS A . n A 1 219 ARG 219 215 215 ARG ARG A . n A 1 220 GLU 220 216 216 GLU GLU A . n A 1 221 ALA 221 217 217 ALA ALA A . n A 1 222 ILE 222 218 218 ILE ILE A . n A 1 223 LYS 223 219 219 LYS LYS A . n A 1 224 HIS 224 220 220 HIS HIS A . n A 1 225 ILE 225 221 221 ILE ILE A . n A 1 226 LYS 226 222 222 LYS LYS A . n A 1 227 GLN 227 223 223 GLN GLN A . n A 1 228 ASN 228 224 224 ASN ASN A . n A 1 229 TYR 229 225 225 TYR TYR A . n A 1 230 GLY 230 226 226 GLY GLY A . n A 1 231 ILE 231 227 ? ? ? A . n A 1 232 ASN 232 228 ? ? ? A . n A 1 233 ASN 233 229 ? ? ? A . n A 1 234 GLU 234 230 ? ? ? A . n A 1 235 LYS 235 231 ? ? ? A . n A 1 236 ILE 236 232 ? ? ? A . n A 1 237 GLY 237 233 ? ? ? A . n A 1 238 GLU 238 234 ? ? ? A . n A 1 239 THR 239 235 ? ? ? A . n A 1 240 LEU 240 236 ? ? ? A . n A 1 241 SER 241 237 ? ? ? A . n B 2 1 DC 1 1 1 DC DC B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DC 3 3 3 DC DC B . n B 2 4 DC 4 4 4 DC DC B . n B 2 5 DA 5 5 5 DA DA B . n B 2 6 ORP 6 6 6 ORP ORP B . n B 2 7 DA 7 7 7 DA DA B . n B 2 8 DG 8 8 8 DG DG B . n B 2 9 DC 9 9 9 DC DC B . n B 2 10 DC 10 10 10 DC DC B . n B 2 11 DC 11 11 11 DC DC B . n B 2 12 DG 12 12 12 DG DG B . n C 3 1 DC 1 1 1 DC DC C . n C 3 2 DG 2 2 2 DG DG C . n C 3 3 DG 3 3 3 DG DG C . n C 3 4 DG 4 4 4 DG DG C . n C 3 5 DC 5 5 5 DC DC C . n C 3 6 DT 6 6 6 DT DT C . n C 3 7 DT 7 7 7 DT DT C . n C 3 8 DT 8 8 8 DT DT C . n C 3 9 DG 9 9 9 DG DG C . n C 3 10 DG 10 10 10 DG DG C . n C 3 11 DG 11 11 11 DG DG C . n C 3 12 DG 12 12 12 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 YTA 1 101 1 YTA YTA B . E 5 HOH 1 301 372 HOH HOH A . E 5 HOH 2 302 66 HOH HOH A . E 5 HOH 3 303 389 HOH HOH A . E 5 HOH 4 304 183 HOH HOH A . E 5 HOH 5 305 430 HOH HOH A . E 5 HOH 6 306 385 HOH HOH A . E 5 HOH 7 307 244 HOH HOH A . E 5 HOH 8 308 405 HOH HOH A . E 5 HOH 9 309 88 HOH HOH A . E 5 HOH 10 310 53 HOH HOH A . E 5 HOH 11 311 243 HOH HOH A . E 5 HOH 12 312 181 HOH HOH A . E 5 HOH 13 313 51 HOH HOH A . E 5 HOH 14 314 250 HOH HOH A . E 5 HOH 15 315 395 HOH HOH A . E 5 HOH 16 316 34 HOH HOH A . E 5 HOH 17 317 428 HOH HOH A . E 5 HOH 18 318 5 HOH HOH A . E 5 HOH 19 319 112 HOH HOH A . E 5 HOH 20 320 281 HOH HOH A . E 5 HOH 21 321 340 HOH HOH A . E 5 HOH 22 322 74 HOH HOH A . E 5 HOH 23 323 111 HOH HOH A . E 5 HOH 24 324 24 HOH HOH A . E 5 HOH 25 325 391 HOH HOH A . E 5 HOH 26 326 223 HOH HOH A . E 5 HOH 27 327 41 HOH HOH A . E 5 HOH 28 328 431 HOH HOH A . E 5 HOH 29 329 416 HOH HOH A . E 5 HOH 30 330 141 HOH HOH A . E 5 HOH 31 331 50 HOH HOH A . E 5 HOH 32 332 64 HOH HOH A . E 5 HOH 33 333 138 HOH HOH A . E 5 HOH 34 334 169 HOH HOH A . E 5 HOH 35 335 422 HOH HOH A . E 5 HOH 36 336 27 HOH HOH A . E 5 HOH 37 337 17 HOH HOH A . E 5 HOH 38 338 309 HOH HOH A . E 5 HOH 39 339 78 HOH HOH A . E 5 HOH 40 340 18 HOH HOH A . E 5 HOH 41 341 80 HOH HOH A . E 5 HOH 42 342 57 HOH HOH A . E 5 HOH 43 343 167 HOH HOH A . E 5 HOH 44 344 33 HOH HOH A . E 5 HOH 45 345 6 HOH HOH A . E 5 HOH 46 346 140 HOH HOH A . E 5 HOH 47 347 310 HOH HOH A . E 5 HOH 48 348 157 HOH HOH A . E 5 HOH 49 349 69 HOH HOH A . E 5 HOH 50 350 156 HOH HOH A . E 5 HOH 51 351 373 HOH HOH A . E 5 HOH 52 352 313 HOH HOH A . E 5 HOH 53 353 402 HOH HOH A . E 5 HOH 54 354 358 HOH HOH A . E 5 HOH 55 355 352 HOH HOH A . E 5 HOH 56 356 101 HOH HOH A . E 5 HOH 57 357 342 HOH HOH A . E 5 HOH 58 358 235 HOH HOH A . E 5 HOH 59 359 70 HOH HOH A . E 5 HOH 60 360 42 HOH HOH A . E 5 HOH 61 361 46 HOH HOH A . E 5 HOH 62 362 47 HOH HOH A . E 5 HOH 63 363 79 HOH HOH A . E 5 HOH 64 364 68 HOH HOH A . E 5 HOH 65 365 319 HOH HOH A . E 5 HOH 66 366 307 HOH HOH A . E 5 HOH 67 367 316 HOH HOH A . E 5 HOH 68 368 32 HOH HOH A . E 5 HOH 69 369 75 HOH HOH A . E 5 HOH 70 370 267 HOH HOH A . E 5 HOH 71 371 179 HOH HOH A . E 5 HOH 72 372 144 HOH HOH A . E 5 HOH 73 373 104 HOH HOH A . E 5 HOH 74 374 67 HOH HOH A . E 5 HOH 75 375 332 HOH HOH A . E 5 HOH 76 376 351 HOH HOH A . E 5 HOH 77 377 49 HOH HOH A . E 5 HOH 78 378 108 HOH HOH A . E 5 HOH 79 379 419 HOH HOH A . E 5 HOH 80 380 77 HOH HOH A . E 5 HOH 81 381 327 HOH HOH A . E 5 HOH 82 382 322 HOH HOH A . E 5 HOH 83 383 180 HOH HOH A . E 5 HOH 84 384 283 HOH HOH A . E 5 HOH 85 385 99 HOH HOH A . E 5 HOH 86 386 217 HOH HOH A . E 5 HOH 87 387 131 HOH HOH A . E 5 HOH 88 388 317 HOH HOH A . E 5 HOH 89 389 31 HOH HOH A . E 5 HOH 90 390 25 HOH HOH A . E 5 HOH 91 391 163 HOH HOH A . E 5 HOH 92 392 400 HOH HOH A . E 5 HOH 93 393 399 HOH HOH A . E 5 HOH 94 394 91 HOH HOH A . E 5 HOH 95 395 346 HOH HOH A . E 5 HOH 96 396 139 HOH HOH A . E 5 HOH 97 397 379 HOH HOH A . E 5 HOH 98 398 292 HOH HOH A . E 5 HOH 99 399 55 HOH HOH A . E 5 HOH 100 400 337 HOH HOH A . E 5 HOH 101 401 293 HOH HOH A . E 5 HOH 102 402 336 HOH HOH A . E 5 HOH 103 403 262 HOH HOH A . E 5 HOH 104 404 105 HOH HOH A . E 5 HOH 105 405 331 HOH HOH A . E 5 HOH 106 406 178 HOH HOH A . E 5 HOH 107 407 349 HOH HOH A . E 5 HOH 108 408 228 HOH HOH A . E 5 HOH 109 409 415 HOH HOH A . E 5 HOH 110 410 83 HOH HOH A . E 5 HOH 111 411 341 HOH HOH A . E 5 HOH 112 412 386 HOH HOH A . E 5 HOH 113 413 71 HOH HOH A . E 5 HOH 114 414 61 HOH HOH A . E 5 HOH 115 415 214 HOH HOH A . E 5 HOH 116 416 345 HOH HOH A . E 5 HOH 117 417 43 HOH HOH A . E 5 HOH 118 418 350 HOH HOH A . E 5 HOH 119 419 98 HOH HOH A . E 5 HOH 120 420 89 HOH HOH A . E 5 HOH 121 421 52 HOH HOH A . E 5 HOH 122 422 335 HOH HOH A . E 5 HOH 123 423 102 HOH HOH A . E 5 HOH 124 424 48 HOH HOH A . E 5 HOH 125 425 100 HOH HOH A . E 5 HOH 126 426 37 HOH HOH A . E 5 HOH 127 427 7 HOH HOH A . E 5 HOH 128 428 137 HOH HOH A . E 5 HOH 129 429 344 HOH HOH A . E 5 HOH 130 430 103 HOH HOH A . E 5 HOH 131 431 308 HOH HOH A . E 5 HOH 132 432 216 HOH HOH A . E 5 HOH 133 433 28 HOH HOH A . E 5 HOH 134 434 315 HOH HOH A . E 5 HOH 135 435 320 HOH HOH A . E 5 HOH 136 436 249 HOH HOH A . E 5 HOH 137 437 82 HOH HOH A . E 5 HOH 138 438 38 HOH HOH A . E 5 HOH 139 439 312 HOH HOH A . E 5 HOH 140 440 284 HOH HOH A . E 5 HOH 141 441 116 HOH HOH A . E 5 HOH 142 442 172 HOH HOH A . E 5 HOH 143 443 253 HOH HOH A . E 5 HOH 144 444 314 HOH HOH A . E 5 HOH 145 445 367 HOH HOH A . E 5 HOH 146 446 303 HOH HOH A . E 5 HOH 147 447 171 HOH HOH A . E 5 HOH 148 448 22 HOH HOH A . E 5 HOH 149 449 114 HOH HOH A . E 5 HOH 150 450 136 HOH HOH A . E 5 HOH 151 451 353 HOH HOH A . E 5 HOH 152 452 404 HOH HOH A . E 5 HOH 153 453 285 HOH HOH A . E 5 HOH 154 454 54 HOH HOH A . E 5 HOH 155 455 364 HOH HOH A . E 5 HOH 156 456 370 HOH HOH A . E 5 HOH 157 457 311 HOH HOH A . E 5 HOH 158 458 174 HOH HOH A . E 5 HOH 159 459 396 HOH HOH A . E 5 HOH 160 460 147 HOH HOH A . E 5 HOH 161 461 394 HOH HOH A . E 5 HOH 162 462 206 HOH HOH A . E 5 HOH 163 463 236 HOH HOH A . E 5 HOH 164 464 433 HOH HOH A . E 5 HOH 165 465 378 HOH HOH A . E 5 HOH 166 466 398 HOH HOH A . E 5 HOH 167 467 86 HOH HOH A . E 5 HOH 168 468 81 HOH HOH A . E 5 HOH 169 469 12 HOH HOH A . E 5 HOH 170 470 87 HOH HOH A . E 5 HOH 171 471 392 HOH HOH A . E 5 HOH 172 472 410 HOH HOH A . E 5 HOH 173 473 321 HOH HOH A . E 5 HOH 174 474 170 HOH HOH A . E 5 HOH 175 475 60 HOH HOH A . E 5 HOH 176 476 325 HOH HOH A . E 5 HOH 177 477 435 HOH HOH A . E 5 HOH 178 478 158 HOH HOH A . E 5 HOH 179 479 426 HOH HOH A . E 5 HOH 180 480 369 HOH HOH A . E 5 HOH 181 481 408 HOH HOH A . E 5 HOH 182 482 397 HOH HOH A . E 5 HOH 183 483 414 HOH HOH A . E 5 HOH 184 484 306 HOH HOH A . E 5 HOH 185 485 301 HOH HOH A . E 5 HOH 186 486 237 HOH HOH A . E 5 HOH 187 487 382 HOH HOH A . E 5 HOH 188 488 348 HOH HOH A . E 5 HOH 189 489 113 HOH HOH A . E 5 HOH 190 490 218 HOH HOH A . E 5 HOH 191 491 384 HOH HOH A . E 5 HOH 192 492 154 HOH HOH A . E 5 HOH 193 493 97 HOH HOH A . E 5 HOH 194 494 413 HOH HOH A . E 5 HOH 195 495 318 HOH HOH A . E 5 HOH 196 496 438 HOH HOH A . E 5 HOH 197 497 436 HOH HOH A . E 5 HOH 198 498 269 HOH HOH A . E 5 HOH 199 499 270 HOH HOH A . E 5 HOH 200 500 361 HOH HOH A . E 5 HOH 201 501 374 HOH HOH A . E 5 HOH 202 502 338 HOH HOH A . E 5 HOH 203 503 377 HOH HOH A . E 5 HOH 204 504 339 HOH HOH A . E 5 HOH 205 505 324 HOH HOH A . E 5 HOH 206 506 434 HOH HOH A . E 5 HOH 207 507 96 HOH HOH A . E 5 HOH 208 508 333 HOH HOH A . E 5 HOH 209 509 226 HOH HOH A . E 5 HOH 210 510 423 HOH HOH A . E 5 HOH 211 511 363 HOH HOH A . E 5 HOH 212 512 347 HOH HOH A . E 5 HOH 213 513 381 HOH HOH A . E 5 HOH 214 514 302 HOH HOH A . E 5 HOH 215 515 371 HOH HOH A . E 5 HOH 216 516 286 HOH HOH A . E 5 HOH 217 517 159 HOH HOH A . E 5 HOH 218 518 359 HOH HOH A . E 5 HOH 219 519 19 HOH HOH A . E 5 HOH 220 520 360 HOH HOH A . E 5 HOH 221 521 271 HOH HOH A . E 5 HOH 222 522 323 HOH HOH A . E 5 HOH 223 523 150 HOH HOH A . E 5 HOH 224 524 409 HOH HOH A . E 5 HOH 225 525 280 HOH HOH A . E 5 HOH 226 526 356 HOH HOH A . E 5 HOH 227 527 387 HOH HOH A . E 5 HOH 228 528 20 HOH HOH A . E 5 HOH 229 529 407 HOH HOH A . E 5 HOH 230 530 95 HOH HOH A . E 5 HOH 231 531 152 HOH HOH A . E 5 HOH 232 532 177 HOH HOH A . E 5 HOH 233 533 328 HOH HOH A . E 5 HOH 234 534 282 HOH HOH A . E 5 HOH 235 535 383 HOH HOH A . E 5 HOH 236 536 401 HOH HOH A . E 5 HOH 237 537 368 HOH HOH A . E 5 HOH 238 538 134 HOH HOH A . E 5 HOH 239 539 362 HOH HOH A . E 5 HOH 240 540 427 HOH HOH A . E 5 HOH 241 541 390 HOH HOH A . E 5 HOH 242 542 388 HOH HOH A . E 5 HOH 243 543 380 HOH HOH A . E 5 HOH 244 544 343 HOH HOH A . E 5 HOH 245 545 425 HOH HOH A . E 5 HOH 246 546 429 HOH HOH A . E 5 HOH 247 547 115 HOH HOH A . E 5 HOH 248 548 424 HOH HOH A . E 5 HOH 249 549 182 HOH HOH A . E 5 HOH 250 550 227 HOH HOH A . F 5 HOH 1 201 421 HOH HOH B . F 5 HOH 2 202 256 HOH HOH B . F 5 HOH 3 203 40 HOH HOH B . F 5 HOH 4 204 110 HOH HOH B . F 5 HOH 5 205 161 HOH HOH B . F 5 HOH 6 206 260 HOH HOH B . F 5 HOH 7 207 73 HOH HOH B . F 5 HOH 8 208 257 HOH HOH B . F 5 HOH 9 209 4 HOH HOH B . F 5 HOH 10 210 287 HOH HOH B . F 5 HOH 11 211 294 HOH HOH B . F 5 HOH 12 212 278 HOH HOH B . F 5 HOH 13 213 305 HOH HOH B . F 5 HOH 14 214 330 HOH HOH B . F 5 HOH 15 215 92 HOH HOH B . F 5 HOH 16 216 298 HOH HOH B . F 5 HOH 17 217 272 HOH HOH B . F 5 HOH 18 218 412 HOH HOH B . F 5 HOH 19 219 263 HOH HOH B . F 5 HOH 20 220 259 HOH HOH B . F 5 HOH 21 221 355 HOH HOH B . F 5 HOH 22 222 432 HOH HOH B . F 5 HOH 23 223 375 HOH HOH B . F 5 HOH 24 224 288 HOH HOH B . F 5 HOH 25 225 234 HOH HOH B . F 5 HOH 26 226 279 HOH HOH B . F 5 HOH 27 227 143 HOH HOH B . F 5 HOH 28 228 418 HOH HOH B . F 5 HOH 29 229 411 HOH HOH B . G 5 HOH 1 101 329 HOH HOH C . G 5 HOH 2 102 264 HOH HOH C . G 5 HOH 3 103 304 HOH HOH C . G 5 HOH 4 104 290 HOH HOH C . G 5 HOH 5 105 296 HOH HOH C . G 5 HOH 6 106 297 HOH HOH C . G 5 HOH 7 107 420 HOH HOH C . G 5 HOH 8 108 291 HOH HOH C . G 5 HOH 9 109 354 HOH HOH C . G 5 HOH 10 110 295 HOH HOH C . G 5 HOH 11 111 258 HOH HOH C . G 5 HOH 12 112 261 HOH HOH C . G 5 HOH 13 113 265 HOH HOH C . G 5 HOH 14 114 299 HOH HOH C . G 5 HOH 15 115 376 HOH HOH C . G 5 HOH 16 116 417 HOH HOH C . G 5 HOH 17 117 277 HOH HOH C . G 5 HOH 18 118 274 HOH HOH C . G 5 HOH 19 119 300 HOH HOH C . G 5 HOH 20 120 366 HOH HOH C . G 5 HOH 21 121 268 HOH HOH C . G 5 HOH 22 122 276 HOH HOH C . G 5 HOH 23 123 289 HOH HOH C . G 5 HOH 24 124 275 HOH HOH C . G 5 HOH 25 125 357 HOH HOH C . G 5 HOH 26 126 135 HOH HOH C . G 5 HOH 27 127 273 HOH HOH C . G 5 HOH 28 128 334 HOH HOH C . G 5 HOH 29 129 176 HOH HOH C . G 5 HOH 30 130 437 HOH HOH C . G 5 HOH 31 131 326 HOH HOH C . G 5 HOH 32 132 403 HOH HOH C . G 5 HOH 33 133 90 HOH HOH C . G 5 HOH 34 134 365 HOH HOH C . G 5 HOH 35 135 93 HOH HOH C . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4310 ? 1 MORE -17 ? 1 'SSA (A^2)' 13860 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-19 2 'Structure model' 1 1 2017-08-16 3 'Structure model' 1 2 2017-08-30 4 'Structure model' 1 3 2017-09-13 5 'Structure model' 1 4 2019-11-27 6 'Structure model' 1 5 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' citation 3 4 'Structure model' pdbx_audit_support 4 4 'Structure model' software 5 5 'Structure model' pdbx_audit_support 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' database_2 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' 4 3 'Structure model' '_citation.journal_volume' 5 3 'Structure model' '_citation.page_first' 6 3 'Structure model' '_citation.page_last' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_pdbx_audit_support.funding_organization' 9 6 'Structure model' '_database_2.pdbx_DOI' 10 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 26.6380 22.7393 21.2247 0.2639 0.1632 0.3037 0.0844 0.0233 0.0479 1.0581 1.0391 0.8456 0.4308 0.8343 -0.0615 -0.0974 0.0459 0.0118 -0.1837 0.7604 0.1192 0.1562 -0.7389 -0.4062 'X-RAY DIFFRACTION' 2 ? refined 39.7118 9.6155 29.0359 0.1685 0.3182 0.1262 0.0681 -0.0116 -0.0058 0.5309 0.0843 0.1476 0.1106 -0.2390 -0.0135 -0.1501 0.1151 0.0082 -0.5651 0.0742 -0.0765 0.1454 0.1785 0.4817 'X-RAY DIFFRACTION' 3 ? refined 30.1295 17.2271 16.4266 0.1876 0.1710 0.1836 0.0657 0.0010 0.0423 1.0041 1.4118 1.2115 0.0971 -0.3865 0.0614 0.0608 0.0506 0.0726 0.1023 0.3768 0.1123 -0.0966 -0.2708 -0.1446 'X-RAY DIFFRACTION' 4 ? refined 29.5131 14.2078 9.9769 0.1728 0.2651 0.1842 0.0419 0.0026 0.0419 0.9368 0.2698 0.4438 0.2738 -0.2662 -0.3420 -0.0774 0.1504 -0.0550 0.2405 -0.0033 0.1053 0.0108 0.0192 -0.2516 'X-RAY DIFFRACTION' 5 ? refined 39.8892 12.6421 0.1394 0.1322 0.2075 0.1469 0.0178 0.0068 0.0409 0.7394 1.0907 1.1911 -0.4705 -0.3095 -0.0605 0.0731 0.0497 0.0000 0.2657 0.0451 0.0550 -0.0619 -0.0833 -0.0563 'X-RAY DIFFRACTION' 6 ? refined 41.7977 3.0767 -1.0158 0.1534 0.2279 0.1333 -0.0014 -0.0158 -0.0158 0.6821 0.8379 0.5423 -0.7202 0.0195 -0.2159 0.0781 -0.0049 0.0006 0.2820 -0.0577 0.1218 -0.0461 0.1349 -0.1750 'X-RAY DIFFRACTION' 7 ? refined 52.4118 1.7962 -3.3591 0.1515 0.2743 0.1407 0.0344 -0.0027 -0.0121 0.3150 0.5734 0.3049 -0.0546 -0.1743 -0.3131 0.0558 -0.1091 -0.0002 0.2410 -0.0604 -0.0757 -0.1578 0.2229 0.1048 'X-RAY DIFFRACTION' 8 ? refined 48.6366 -8.7278 2.0773 0.2094 0.1699 0.2219 0.0168 0.0062 -0.0638 0.7701 1.2237 0.8894 -0.0719 0.2337 -0.3941 -0.0214 -0.0423 -0.0001 0.1843 -0.3955 0.0032 -0.0864 0.3783 0.0335 'X-RAY DIFFRACTION' 9 ? refined 43.6855 -6.1228 18.7654 0.2216 0.2236 0.2928 0.0820 -0.0112 0.0425 0.4027 1.5473 1.1223 -0.7461 -0.1854 -0.0786 -0.2379 0.2327 -0.0467 -0.3428 -0.6266 -0.2127 0.2645 0.1377 0.0401 'X-RAY DIFFRACTION' 10 ? refined 41.5833 -5.8421 17.6020 0.2275 0.2559 0.3070 0.0120 0.0115 0.0378 0.5080 1.9566 1.1190 0.3920 -0.2297 -0.4653 -0.3537 0.1167 -0.0029 -0.1107 -0.6612 0.0714 0.1085 0.0710 -0.0530 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 15 ;chain 'A' and (resid 1 through 15 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 16 A 27 ;chain 'A' and (resid 16 through 27 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 28 A 73 ;chain 'A' and (resid 28 through 73 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 74 A 90 ;chain 'A' and (resid 74 through 90 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 91 A 143 ;chain 'A' and (resid 91 through 143 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 144 A 162 ;chain 'A' and (resid 144 through 162 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 163 A 178 ;chain 'A' and (resid 163 through 178 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 A 179 A 226 ;chain 'A' and (resid 179 through 226 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 B 1 B 12 ;chain 'B' and (resid 1 through 12 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 C 1 C 12 ;chain 'C' and (resid 1 through 12 ) ; ? ? ? ? ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10_2155 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 381 ? ? O A HOH 533 ? ? 2.07 2 1 O A HOH 510 ? ? O A HOH 543 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" C DC 5 ? ? "C3'" C DC 5 ? ? 1.382 1.419 -0.037 0.006 N 2 1 "O3'" C DT 6 ? ? "C3'" C DT 6 ? ? 1.377 1.419 -0.042 0.006 N 3 1 "O3'" C DT 7 ? ? "C3'" C DT 7 ? ? 1.377 1.419 -0.042 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DC 3 ? ? "C1'" B DC 3 ? ? N1 B DC 3 ? ? 110.62 108.30 2.32 0.30 N 2 1 "O4'" C DG 3 ? ? "C1'" C DG 3 ? ? N9 C DG 3 ? ? 112.91 108.30 4.61 0.30 N 3 1 "O4'" C DC 5 ? ? "C1'" C DC 5 ? ? N1 C DC 5 ? ? 110.28 108.30 1.98 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 54 ? ? 72.20 157.03 2 1 TYR A 134 ? ? -131.07 -44.07 3 1 LYS A 158 ? ? 54.76 -122.65 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 550 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.17 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A PRO -2 ? A PRO 2 3 1 Y 1 A VAL -1 ? A VAL 3 4 1 Y 1 A PRO 0 ? A PRO 4 5 1 Y 1 A ILE 227 ? A ILE 231 6 1 Y 1 A ASN 228 ? A ASN 232 7 1 Y 1 A ASN 229 ? A ASN 233 8 1 Y 1 A GLU 230 ? A GLU 234 9 1 Y 1 A LYS 231 ? A LYS 235 10 1 Y 1 A ILE 232 ? A ILE 236 11 1 Y 1 A GLY 233 ? A GLY 237 12 1 Y 1 A GLU 234 ? A GLU 238 13 1 Y 1 A THR 235 ? A THR 239 14 1 Y 1 A LEU 236 ? A LEU 240 15 1 Y 1 A SER 237 ? A SER 241 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 HOH O O N N 287 HOH H1 H N N 288 HOH H2 H N N 289 ILE N N N N 290 ILE CA C N S 291 ILE C C N N 292 ILE O O N N 293 ILE CB C N S 294 ILE CG1 C N N 295 ILE CG2 C N N 296 ILE CD1 C N N 297 ILE OXT O N N 298 ILE H H N N 299 ILE H2 H N N 300 ILE HA H N N 301 ILE HB H N N 302 ILE HG12 H N N 303 ILE HG13 H N N 304 ILE HG21 H N N 305 ILE HG22 H N N 306 ILE HG23 H N N 307 ILE HD11 H N N 308 ILE HD12 H N N 309 ILE HD13 H N N 310 ILE HXT H N N 311 LEU N N N N 312 LEU CA C N S 313 LEU C C N N 314 LEU O O N N 315 LEU CB C N N 316 LEU CG C N N 317 LEU CD1 C N N 318 LEU CD2 C N N 319 LEU OXT O N N 320 LEU H H N N 321 LEU H2 H N N 322 LEU HA H N N 323 LEU HB2 H N N 324 LEU HB3 H N N 325 LEU HG H N N 326 LEU HD11 H N N 327 LEU HD12 H N N 328 LEU HD13 H N N 329 LEU HD21 H N N 330 LEU HD22 H N N 331 LEU HD23 H N N 332 LEU HXT H N N 333 LYS N N N N 334 LYS CA C N S 335 LYS C C N N 336 LYS O O N N 337 LYS CB C N N 338 LYS CG C N N 339 LYS CD C N N 340 LYS CE C N N 341 LYS NZ N N N 342 LYS OXT O N N 343 LYS H H N N 344 LYS H2 H N N 345 LYS HA H N N 346 LYS HB2 H N N 347 LYS HB3 H N N 348 LYS HG2 H N N 349 LYS HG3 H N N 350 LYS HD2 H N N 351 LYS HD3 H N N 352 LYS HE2 H N N 353 LYS HE3 H N N 354 LYS HZ1 H N N 355 LYS HZ2 H N N 356 LYS HZ3 H N N 357 LYS HXT H N N 358 MET N N N N 359 MET CA C N S 360 MET C C N N 361 MET O O N N 362 MET CB C N N 363 MET CG C N N 364 MET SD S N N 365 MET CE C N N 366 MET OXT O N N 367 MET H H N N 368 MET H2 H N N 369 MET HA H N N 370 MET HB2 H N N 371 MET HB3 H N N 372 MET HG2 H N N 373 MET HG3 H N N 374 MET HE1 H N N 375 MET HE2 H N N 376 MET HE3 H N N 377 MET HXT H N N 378 ORP C1 C N S 379 ORP O1 O N N 380 ORP C2 C N N 381 ORP C3 C N S 382 ORP O3 O N N 383 ORP C4 C N R 384 ORP O4 O N N 385 ORP C5 C N N 386 ORP O5 O N N 387 ORP P P N N 388 ORP O1P O N N 389 ORP O2P O N N 390 ORP O3P O N N 391 ORP H1 H N N 392 ORP HO1 H N N 393 ORP H21 H N N 394 ORP H22 H N N 395 ORP H3 H N N 396 ORP HO3 H N N 397 ORP H4 H N N 398 ORP H51 H N N 399 ORP H52 H N N 400 ORP HOP2 H N N 401 ORP HOP3 H N N 402 PHE N N N N 403 PHE CA C N S 404 PHE C C N N 405 PHE O O N N 406 PHE CB C N N 407 PHE CG C Y N 408 PHE CD1 C Y N 409 PHE CD2 C Y N 410 PHE CE1 C Y N 411 PHE CE2 C Y N 412 PHE CZ C Y N 413 PHE OXT O N N 414 PHE H H N N 415 PHE H2 H N N 416 PHE HA H N N 417 PHE HB2 H N N 418 PHE HB3 H N N 419 PHE HD1 H N N 420 PHE HD2 H N N 421 PHE HE1 H N N 422 PHE HE2 H N N 423 PHE HZ H N N 424 PHE HXT H N N 425 PRO N N N N 426 PRO CA C N S 427 PRO C C N N 428 PRO O O N N 429 PRO CB C N N 430 PRO CG C N N 431 PRO CD C N N 432 PRO OXT O N N 433 PRO H H N N 434 PRO HA H N N 435 PRO HB2 H N N 436 PRO HB3 H N N 437 PRO HG2 H N N 438 PRO HG3 H N N 439 PRO HD2 H N N 440 PRO HD3 H N N 441 PRO HXT H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 THR N N N N 457 THR CA C N S 458 THR C C N N 459 THR O O N N 460 THR CB C N R 461 THR OG1 O N N 462 THR CG2 C N N 463 THR OXT O N N 464 THR H H N N 465 THR H2 H N N 466 THR HA H N N 467 THR HB H N N 468 THR HG1 H N N 469 THR HG21 H N N 470 THR HG22 H N N 471 THR HG23 H N N 472 THR HXT H N N 473 TRP N N N N 474 TRP CA C N S 475 TRP C C N N 476 TRP O O N N 477 TRP CB C N N 478 TRP CG C Y N 479 TRP CD1 C Y N 480 TRP CD2 C Y N 481 TRP NE1 N Y N 482 TRP CE2 C Y N 483 TRP CE3 C Y N 484 TRP CZ2 C Y N 485 TRP CZ3 C Y N 486 TRP CH2 C Y N 487 TRP OXT O N N 488 TRP H H N N 489 TRP H2 H N N 490 TRP HA H N N 491 TRP HB2 H N N 492 TRP HB3 H N N 493 TRP HD1 H N N 494 TRP HE1 H N N 495 TRP HE3 H N N 496 TRP HZ2 H N N 497 TRP HZ3 H N N 498 TRP HH2 H N N 499 TRP HXT H N N 500 TYR N N N N 501 TYR CA C N S 502 TYR C C N N 503 TYR O O N N 504 TYR CB C N N 505 TYR CG C Y N 506 TYR CD1 C Y N 507 TYR CD2 C Y N 508 TYR CE1 C Y N 509 TYR CE2 C Y N 510 TYR CZ C Y N 511 TYR OH O N N 512 TYR OXT O N N 513 TYR H H N N 514 TYR H2 H N N 515 TYR HA H N N 516 TYR HB2 H N N 517 TYR HB3 H N N 518 TYR HD1 H N N 519 TYR HD2 H N N 520 TYR HE1 H N N 521 TYR HE2 H N N 522 TYR HH H N N 523 TYR HXT H N N 524 VAL N N N N 525 VAL CA C N S 526 VAL C C N N 527 VAL O O N N 528 VAL CB C N N 529 VAL CG1 C N N 530 VAL CG2 C N N 531 VAL OXT O N N 532 VAL H H N N 533 VAL H2 H N N 534 VAL HA H N N 535 VAL HB H N N 536 VAL HG11 H N N 537 VAL HG12 H N N 538 VAL HG13 H N N 539 VAL HG21 H N N 540 VAL HG22 H N N 541 VAL HG23 H N N 542 VAL HXT H N N 543 YTA N1 N Y N 544 YTA C2 C Y N 545 YTA N3 N Y N 546 YTA C3M C N N 547 YTA C4 C Y N 548 YTA C5 C Y N 549 YTA C6 C Y N 550 YTA N6 N N N 551 YTA N7 N Y N 552 YTA C8 C Y N 553 YTA N9 N Y N 554 YTA C01 C Y N 555 YTA N01 N Y N 556 YTA O01 O N N 557 YTA C02 C Y N 558 YTA O02 O N N 559 YTA C03 C Y N 560 YTA C04 C Y N 561 YTA C05 C Y N 562 YTA C06 C Y N 563 YTA C07 C Y N 564 YTA C08 C Y N 565 YTA C09 C N N 566 YTA C33 C N N 567 YTA O03 O N N 568 YTA N02 N N N 569 YTA C10 C N N 570 YTA C11 C Y N 571 YTA C12 C Y N 572 YTA C13 C Y N 573 YTA C14 C N R 574 YTA C15 C Y N 575 YTA C16 C Y N 576 YTA C17 C Y N 577 YTA C18 C Y N 578 YTA C19 C Y N 579 YTA C20 C N N 580 YTA N03 N Y N 581 YTA O O N N 582 YTA O04 O N N 583 YTA N04 N N N 584 YTA O05 O N N 585 YTA C21 C N N 586 YTA C22 C N N 587 YTA C23 C Y N 588 YTA C24 C Y N 589 YTA C25 C Y N 590 YTA C26 C Y N 591 YTA C27 C Y N 592 YTA C28 C Y N 593 YTA C29 C Y N 594 YTA C30 C Y N 595 YTA C31 C N N 596 YTA C32 C N N 597 YTA N N Y N 598 YTA O47 O N N 599 YTA O48 O N N 600 YTA C49 C N N 601 YTA S S N N 602 YTA H21 H N N 603 YTA H3M2 H N N 604 YTA H3M1 H N N 605 YTA H63 H N N 606 YTA H62 H N N 607 YTA H82 H N N 608 YTA H012 H N N 609 YTA H013 H N N 610 YTA H021 H N N 611 YTA H023 H N N 612 YTA H081 H N N 613 YTA H331 H N N 614 YTA H333 H N N 615 YTA H332 H N N 616 YTA H101 H N N 617 YTA H102 H N N 618 YTA H121 H N N 619 YTA H141 H N N 620 YTA H191 H N N 621 YTA H033 H N N 622 YTA HO1 H N N 623 YTA H211 H N N 624 YTA H212 H N N 625 YTA H221 H N N 626 YTA H222 H N N 627 YTA H292 H N N 628 YTA H321 H N N 629 YTA H323 H N N 630 YTA H322 H N N 631 YTA HN1 H N N 632 YTA H471 H N N 633 YTA H492 H N N 634 YTA H493 H N N 635 YTA H491 H N N 636 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 HOH O H1 sing N N 286 HOH O H2 sing N N 287 ILE N CA sing N N 288 ILE N H sing N N 289 ILE N H2 sing N N 290 ILE CA C sing N N 291 ILE CA CB sing N N 292 ILE CA HA sing N N 293 ILE C O doub N N 294 ILE C OXT sing N N 295 ILE CB CG1 sing N N 296 ILE CB CG2 sing N N 297 ILE CB HB sing N N 298 ILE CG1 CD1 sing N N 299 ILE CG1 HG12 sing N N 300 ILE CG1 HG13 sing N N 301 ILE CG2 HG21 sing N N 302 ILE CG2 HG22 sing N N 303 ILE CG2 HG23 sing N N 304 ILE CD1 HD11 sing N N 305 ILE CD1 HD12 sing N N 306 ILE CD1 HD13 sing N N 307 ILE OXT HXT sing N N 308 LEU N CA sing N N 309 LEU N H sing N N 310 LEU N H2 sing N N 311 LEU CA C sing N N 312 LEU CA CB sing N N 313 LEU CA HA sing N N 314 LEU C O doub N N 315 LEU C OXT sing N N 316 LEU CB CG sing N N 317 LEU CB HB2 sing N N 318 LEU CB HB3 sing N N 319 LEU CG CD1 sing N N 320 LEU CG CD2 sing N N 321 LEU CG HG sing N N 322 LEU CD1 HD11 sing N N 323 LEU CD1 HD12 sing N N 324 LEU CD1 HD13 sing N N 325 LEU CD2 HD21 sing N N 326 LEU CD2 HD22 sing N N 327 LEU CD2 HD23 sing N N 328 LEU OXT HXT sing N N 329 LYS N CA sing N N 330 LYS N H sing N N 331 LYS N H2 sing N N 332 LYS CA C sing N N 333 LYS CA CB sing N N 334 LYS CA HA sing N N 335 LYS C O doub N N 336 LYS C OXT sing N N 337 LYS CB CG sing N N 338 LYS CB HB2 sing N N 339 LYS CB HB3 sing N N 340 LYS CG CD sing N N 341 LYS CG HG2 sing N N 342 LYS CG HG3 sing N N 343 LYS CD CE sing N N 344 LYS CD HD2 sing N N 345 LYS CD HD3 sing N N 346 LYS CE NZ sing N N 347 LYS CE HE2 sing N N 348 LYS CE HE3 sing N N 349 LYS NZ HZ1 sing N N 350 LYS NZ HZ2 sing N N 351 LYS NZ HZ3 sing N N 352 LYS OXT HXT sing N N 353 MET N CA sing N N 354 MET N H sing N N 355 MET N H2 sing N N 356 MET CA C sing N N 357 MET CA CB sing N N 358 MET CA HA sing N N 359 MET C O doub N N 360 MET C OXT sing N N 361 MET CB CG sing N N 362 MET CB HB2 sing N N 363 MET CB HB3 sing N N 364 MET CG SD sing N N 365 MET CG HG2 sing N N 366 MET CG HG3 sing N N 367 MET SD CE sing N N 368 MET CE HE1 sing N N 369 MET CE HE2 sing N N 370 MET CE HE3 sing N N 371 MET OXT HXT sing N N 372 ORP C1 O1 sing N N 373 ORP C1 C2 sing N N 374 ORP C1 O4 sing N N 375 ORP C1 H1 sing N N 376 ORP O1 HO1 sing N N 377 ORP C2 C3 sing N N 378 ORP C2 H21 sing N N 379 ORP C2 H22 sing N N 380 ORP C3 O3 sing N N 381 ORP C3 C4 sing N N 382 ORP C3 H3 sing N N 383 ORP O3 HO3 sing N N 384 ORP C4 O4 sing N N 385 ORP C4 C5 sing N N 386 ORP C4 H4 sing N N 387 ORP C5 O5 sing N N 388 ORP C5 H51 sing N N 389 ORP C5 H52 sing N N 390 ORP O5 P sing N N 391 ORP P O1P doub N N 392 ORP P O2P sing N N 393 ORP P O3P sing N N 394 ORP O2P HOP2 sing N N 395 ORP O3P HOP3 sing N N 396 PHE N CA sing N N 397 PHE N H sing N N 398 PHE N H2 sing N N 399 PHE CA C sing N N 400 PHE CA CB sing N N 401 PHE CA HA sing N N 402 PHE C O doub N N 403 PHE C OXT sing N N 404 PHE CB CG sing N N 405 PHE CB HB2 sing N N 406 PHE CB HB3 sing N N 407 PHE CG CD1 doub Y N 408 PHE CG CD2 sing Y N 409 PHE CD1 CE1 sing Y N 410 PHE CD1 HD1 sing N N 411 PHE CD2 CE2 doub Y N 412 PHE CD2 HD2 sing N N 413 PHE CE1 CZ doub Y N 414 PHE CE1 HE1 sing N N 415 PHE CE2 CZ sing Y N 416 PHE CE2 HE2 sing N N 417 PHE CZ HZ sing N N 418 PHE OXT HXT sing N N 419 PRO N CA sing N N 420 PRO N CD sing N N 421 PRO N H sing N N 422 PRO CA C sing N N 423 PRO CA CB sing N N 424 PRO CA HA sing N N 425 PRO C O doub N N 426 PRO C OXT sing N N 427 PRO CB CG sing N N 428 PRO CB HB2 sing N N 429 PRO CB HB3 sing N N 430 PRO CG CD sing N N 431 PRO CG HG2 sing N N 432 PRO CG HG3 sing N N 433 PRO CD HD2 sing N N 434 PRO CD HD3 sing N N 435 PRO OXT HXT sing N N 436 SER N CA sing N N 437 SER N H sing N N 438 SER N H2 sing N N 439 SER CA C sing N N 440 SER CA CB sing N N 441 SER CA HA sing N N 442 SER C O doub N N 443 SER C OXT sing N N 444 SER CB OG sing N N 445 SER CB HB2 sing N N 446 SER CB HB3 sing N N 447 SER OG HG sing N N 448 SER OXT HXT sing N N 449 THR N CA sing N N 450 THR N H sing N N 451 THR N H2 sing N N 452 THR CA C sing N N 453 THR CA CB sing N N 454 THR CA HA sing N N 455 THR C O doub N N 456 THR C OXT sing N N 457 THR CB OG1 sing N N 458 THR CB CG2 sing N N 459 THR CB HB sing N N 460 THR OG1 HG1 sing N N 461 THR CG2 HG21 sing N N 462 THR CG2 HG22 sing N N 463 THR CG2 HG23 sing N N 464 THR OXT HXT sing N N 465 TRP N CA sing N N 466 TRP N H sing N N 467 TRP N H2 sing N N 468 TRP CA C sing N N 469 TRP CA CB sing N N 470 TRP CA HA sing N N 471 TRP C O doub N N 472 TRP C OXT sing N N 473 TRP CB CG sing N N 474 TRP CB HB2 sing N N 475 TRP CB HB3 sing N N 476 TRP CG CD1 doub Y N 477 TRP CG CD2 sing Y N 478 TRP CD1 NE1 sing Y N 479 TRP CD1 HD1 sing N N 480 TRP CD2 CE2 doub Y N 481 TRP CD2 CE3 sing Y N 482 TRP NE1 CE2 sing Y N 483 TRP NE1 HE1 sing N N 484 TRP CE2 CZ2 sing Y N 485 TRP CE3 CZ3 doub Y N 486 TRP CE3 HE3 sing N N 487 TRP CZ2 CH2 doub Y N 488 TRP CZ2 HZ2 sing N N 489 TRP CZ3 CH2 sing Y N 490 TRP CZ3 HZ3 sing N N 491 TRP CH2 HH2 sing N N 492 TRP OXT HXT sing N N 493 TYR N CA sing N N 494 TYR N H sing N N 495 TYR N H2 sing N N 496 TYR CA C sing N N 497 TYR CA CB sing N N 498 TYR CA HA sing N N 499 TYR C O doub N N 500 TYR C OXT sing N N 501 TYR CB CG sing N N 502 TYR CB HB2 sing N N 503 TYR CB HB3 sing N N 504 TYR CG CD1 doub Y N 505 TYR CG CD2 sing Y N 506 TYR CD1 CE1 sing Y N 507 TYR CD1 HD1 sing N N 508 TYR CD2 CE2 doub Y N 509 TYR CD2 HD2 sing N N 510 TYR CE1 CZ doub Y N 511 TYR CE1 HE1 sing N N 512 TYR CE2 CZ sing Y N 513 TYR CE2 HE2 sing N N 514 TYR CZ OH sing N N 515 TYR OH HH sing N N 516 TYR OXT HXT sing N N 517 VAL N CA sing N N 518 VAL N H sing N N 519 VAL N H2 sing N N 520 VAL CA C sing N N 521 VAL CA CB sing N N 522 VAL CA HA sing N N 523 VAL C O doub N N 524 VAL C OXT sing N N 525 VAL CB CG1 sing N N 526 VAL CB CG2 sing N N 527 VAL CB HB sing N N 528 VAL CG1 HG11 sing N N 529 VAL CG1 HG12 sing N N 530 VAL CG1 HG13 sing N N 531 VAL CG2 HG21 sing N N 532 VAL CG2 HG22 sing N N 533 VAL CG2 HG23 sing N N 534 VAL OXT HXT sing N N 535 YTA C33 O01 sing N N 536 YTA O01 C06 sing N N 537 YTA O02 C03 sing N N 538 YTA C06 C03 doub Y N 539 YTA C06 C02 sing Y N 540 YTA C03 C01 sing Y N 541 YTA C02 C05 doub Y N 542 YTA C01 C04 doub Y N 543 YTA C05 C04 sing Y N 544 YTA C05 N01 sing Y N 545 YTA C04 C08 sing Y N 546 YTA N01 C07 sing Y N 547 YTA C08 C07 doub Y N 548 YTA C07 C09 sing N N 549 YTA O03 C09 doub N N 550 YTA C09 N02 sing N N 551 YTA C8 N9 sing Y N 552 YTA C8 N7 doub Y N 553 YTA N9 C4 doub Y N 554 YTA N7 C5 sing Y N 555 YTA N02 C10 sing N N 556 YTA N02 C11 sing N N 557 YTA C10 C14 sing N N 558 YTA C4 C5 sing Y N 559 YTA C4 N3 sing Y N 560 YTA C11 C12 doub Y N 561 YTA C11 C13 sing Y N 562 YTA C5 C6 doub Y N 563 YTA C12 C15 sing Y N 564 YTA C14 C3M sing N N 565 YTA C14 C13 sing N N 566 YTA C3M N3 sing N N 567 YTA N3 C2 sing Y N 568 YTA C13 C17 doub Y N 569 YTA C6 N6 sing N N 570 YTA C6 N1 sing Y N 571 YTA C15 O sing N N 572 YTA C15 C16 doub Y N 573 YTA C2 N1 doub Y N 574 YTA C17 C16 sing Y N 575 YTA C17 C19 sing Y N 576 YTA C16 N03 sing Y N 577 YTA C19 C18 doub Y N 578 YTA N03 C18 sing Y N 579 YTA C18 C20 sing N N 580 YTA C20 O04 doub N N 581 YTA C20 N04 sing N N 582 YTA C21 N04 sing N N 583 YTA C21 C22 sing N N 584 YTA N04 C23 sing N N 585 YTA C22 C24 sing N N 586 YTA C23 C24 doub Y N 587 YTA C23 C26 sing Y N 588 YTA O47 C26 sing N N 589 YTA C24 C25 sing Y N 590 YTA C26 C27 doub Y N 591 YTA C25 C29 sing Y N 592 YTA C25 C28 doub Y N 593 YTA C27 C28 sing Y N 594 YTA C27 O48 sing N N 595 YTA C29 C30 doub Y N 596 YTA C28 N sing Y N 597 YTA O48 C49 sing N N 598 YTA C30 N sing Y N 599 YTA C30 C31 sing N N 600 YTA S C31 sing N N 601 YTA S C32 sing N N 602 YTA C31 O05 doub N N 603 YTA C2 H21 sing N N 604 YTA C3M H3M2 sing N N 605 YTA C3M H3M1 sing N N 606 YTA N6 H63 sing N N 607 YTA N6 H62 sing N N 608 YTA C8 H82 sing N N 609 YTA C01 H012 sing N N 610 YTA N01 H013 sing N N 611 YTA C02 H021 sing N N 612 YTA O02 H023 sing N N 613 YTA C08 H081 sing N N 614 YTA C33 H331 sing N N 615 YTA C33 H333 sing N N 616 YTA C33 H332 sing N N 617 YTA C10 H101 sing N N 618 YTA C10 H102 sing N N 619 YTA C12 H121 sing N N 620 YTA C14 H141 sing N N 621 YTA C19 H191 sing N N 622 YTA N03 H033 sing N N 623 YTA O HO1 sing N N 624 YTA C21 H211 sing N N 625 YTA C21 H212 sing N N 626 YTA C22 H221 sing N N 627 YTA C22 H222 sing N N 628 YTA C29 H292 sing N N 629 YTA C32 H321 sing N N 630 YTA C32 H323 sing N N 631 YTA C32 H322 sing N N 632 YTA N HN1 sing N N 633 YTA O47 H471 sing N N 634 YTA C49 H492 sing N N 635 YTA C49 H493 sing N N 636 YTA C49 H491 sing N N 637 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5UUF 'double helix' 5UUF 'a-form double helix' 5UUF 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 12 1_555 0.292 -0.252 0.077 -1.393 -13.470 -3.075 1 B_DC1:DG12_C B 1 ? C 12 ? 19 1 1 B DC 2 1_555 C DG 11 1_555 0.080 -0.193 0.265 -4.566 -6.695 0.450 2 B_DC2:DG11_C B 2 ? C 11 ? 19 1 1 B DC 3 1_555 C DG 10 1_555 0.248 -0.233 -0.129 10.331 -4.192 -1.353 3 B_DC3:DG10_C B 3 ? C 10 ? 19 1 1 B DC 4 1_555 C DG 9 1_555 0.210 -0.199 0.257 -6.769 -7.212 0.311 4 B_DC4:DG9_C B 4 ? C 9 ? 19 1 1 B DA 5 1_555 C DT 8 1_555 0.132 -0.040 -0.313 -12.204 -5.516 1.631 5 B_DA5:DT8_C B 5 ? C 8 ? 20 1 1 B DA 7 1_555 C DT 6 1_555 0.220 -0.116 0.297 5.804 -22.417 -2.646 6 B_DA7:DT6_C B 7 ? C 6 ? 20 1 1 B DG 8 1_555 C DC 5 1_555 -0.181 -0.224 0.170 0.199 -11.455 0.565 7 B_DG8:DC5_C B 8 ? C 5 ? 19 1 1 B DC 9 1_555 C DG 4 1_555 0.227 -0.178 0.162 -7.705 -6.793 -2.068 8 B_DC9:DG4_C B 9 ? C 4 ? 19 1 1 B DC 10 1_555 C DG 3 1_555 0.008 -0.055 0.087 -3.711 -4.064 1.068 9 B_DC10:DG3_C B 10 ? C 3 ? 19 1 1 B DC 11 1_555 C DG 2 1_555 0.096 -0.188 -0.242 11.248 -5.979 -0.898 10 B_DC11:DG2_C B 11 ? C 2 ? 19 1 1 B DG 12 1_555 C DC 1 1_555 -0.181 -0.147 0.036 11.882 -1.877 -1.567 11 B_DG12:DC1_C B 12 ? C 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 12 1_555 B DC 2 1_555 C DG 11 1_555 0.357 -0.875 3.319 1.341 2.591 35.214 -1.828 -0.388 3.260 4.274 -2.211 35.331 1 BB_DC1DC2:DG11DG12_CC B 1 ? C 12 ? B 2 ? C 11 ? 1 B DC 2 1_555 C DG 11 1_555 B DC 3 1_555 C DG 10 1_555 -0.138 -0.276 2.993 5.468 4.618 27.346 -1.537 1.433 2.829 9.562 -11.322 28.250 2 BB_DC2DC3:DG10DG11_CC B 2 ? C 11 ? B 3 ? C 10 ? 1 B DC 3 1_555 C DG 10 1_555 B DC 4 1_555 C DG 9 1_555 0.472 -0.872 3.649 -1.874 -0.409 39.552 -1.235 -0.942 3.632 -0.604 2.768 39.596 3 BB_DC3DC4:DG9DG10_CC B 3 ? C 10 ? B 4 ? C 9 ? 1 B DC 4 1_555 C DG 9 1_555 B DA 5 1_555 C DT 8 1_555 0.490 -1.217 3.328 8.982 4.859 34.165 -2.705 0.522 3.156 8.050 -14.881 35.615 4 BB_DC4DA5:DT8DG9_CC B 4 ? C 9 ? B 5 ? C 8 ? 1 B DA 5 1_555 C DT 8 1_555 B DA 7 1_555 C DT 6 1_555 -0.034 -0.088 6.209 -6.632 10.162 58.074 -1.073 -0.607 6.089 10.345 6.751 59.220 5 BB_DA5DA7:DT6DT8_CC B 5 ? C 8 ? B 7 ? C 6 ? 1 B DA 7 1_555 C DT 6 1_555 B DG 8 1_555 C DC 5 1_555 -0.153 -1.056 3.392 -0.092 8.946 36.942 -2.767 0.224 3.064 13.870 0.143 37.973 6 BB_DA7DG8:DC5DT6_CC B 7 ? C 6 ? B 8 ? C 5 ? 1 B DG 8 1_555 C DC 5 1_555 B DC 9 1_555 C DG 4 1_555 -0.157 -0.851 3.484 1.370 1.702 34.748 -1.696 0.483 3.431 2.846 -2.292 34.815 7 BB_DG8DC9:DG4DC5_CC B 8 ? C 5 ? B 9 ? C 4 ? 1 B DC 9 1_555 C DG 4 1_555 B DC 10 1_555 C DG 3 1_555 0.822 -0.077 3.264 3.274 2.469 35.105 -0.495 -0.866 3.312 4.076 -5.405 35.336 8 BB_DC9DC10:DG3DG4_CC B 9 ? C 4 ? B 10 ? C 3 ? 1 B DC 10 1_555 C DG 3 1_555 B DC 11 1_555 C DG 2 1_555 -0.926 0.174 3.030 1.463 1.119 25.121 0.098 2.518 2.977 2.569 -3.358 25.187 9 BB_DC10DC11:DG2DG3_CC B 10 ? C 3 ? B 11 ? C 2 ? 1 B DC 11 1_555 C DG 2 1_555 B DG 12 1_555 C DC 1 1_555 0.338 -0.095 3.538 -5.122 0.572 36.688 -0.233 -1.270 3.459 0.903 8.087 37.036 10 BB_DC11DG12:DC1DG2_CC B 11 ? C 2 ? B 12 ? C 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Science Foundation (NSF, United States)' 'United States' MCB-1517695 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' 'R01 ES019625' 2 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' 'T32 ES007028' 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'yatakemycin-adenine nucleobase adduct' YTA 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3BVS _pdbx_initial_refinement_model.details 'PDB entry 3BVS' #