HEADER TRANSFERASE/ANTIBIOTIC 22-FEB-17 5UXC TITLE CRYSTAL STRUCTURE OF MACROLIDE 2'-PHOSPHOTRANSFERASE MPHH FROM TITLE 2 BRACHYBACTERIUM FAECIUM IN COMPLEX WITH GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED AMINOGLYCOSIDE PHOSPHOTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BRACHYBACTERIUM FAECIUM; SOURCE 3 ORGANISM_TAXID: 446465; SOURCE 4 STRAIN: ATCC 43885 / DSM 4810 / NCIB 9860; SOURCE 5 GENE: BFAE_22410; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG53 KEYWDS ANTIBIOTIC RESISTANCE, MACROLIDE, CAVE BACTERIUM, PHOSPHOTRANSFERASE, KEYWDS 2 KINASE, ALPHA/BETA PROTEIN, AZITHROMYCIN, STRUCTURAL GENOMICS, KEYWDS 3 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, KEYWDS 4 NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, NIAID, KEYWDS 5 TRANSFERASE-ANTIBIOTIC COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,T.SKARINA,Z.WAWRZAK,V.YIM,A.SAVCHENKO,W.F.ANDERSON,CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 5 16-OCT-24 5UXC 1 REMARK REVDAT 4 11-DEC-19 5UXC 1 REMARK REVDAT 3 21-FEB-18 5UXC 1 JRNL REMARK SEQRES REVDAT 2 13-SEP-17 5UXC 1 REMARK REVDAT 1 16-AUG-17 5UXC 0 JRNL AUTH A.C.PAWLOWSKI,P.J.STOGIOS,K.KOTEVA,T.SKARINA,E.EVDOKIMOVA, JRNL AUTH 2 A.SAVCHENKO,G.D.WRIGHT JRNL TITL THE EVOLUTION OF SUBSTRATE DISCRIMINATION IN MACROLIDE JRNL TITL 2 ANTIBIOTIC RESISTANCE ENZYMES. JRNL REF NAT COMMUN V. 9 112 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 29317655 JRNL DOI 10.1038/S41467-017-02680-0 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2733: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 39023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.207 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.2552 - 4.1441 0.98 2777 149 0.1598 0.1914 REMARK 3 2 4.1441 - 3.2897 1.00 2698 144 0.1306 0.1614 REMARK 3 3 3.2897 - 2.8740 1.00 2684 144 0.1518 0.1954 REMARK 3 4 2.8740 - 2.6113 1.00 2668 126 0.1605 0.1965 REMARK 3 5 2.6113 - 2.4242 1.00 2682 120 0.1571 0.2066 REMARK 3 6 2.4242 - 2.2813 1.00 2640 141 0.1524 0.2010 REMARK 3 7 2.2813 - 2.1670 1.00 2636 147 0.1560 0.2151 REMARK 3 8 2.1670 - 2.0727 1.00 2614 141 0.1672 0.2080 REMARK 3 9 2.0727 - 1.9929 1.00 2635 123 0.1743 0.2312 REMARK 3 10 1.9929 - 1.9241 1.00 2636 136 0.1815 0.2018 REMARK 3 11 1.9241 - 1.8640 1.00 2635 130 0.1931 0.2288 REMARK 3 12 1.8640 - 1.8107 1.00 2632 119 0.2142 0.2684 REMARK 3 13 1.8107 - 1.7630 1.00 2573 152 0.2388 0.3750 REMARK 3 14 1.7630 - 1.7200 1.00 2610 131 0.2703 0.3569 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.990 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 2526 REMARK 3 ANGLE : 1.497 3497 REMARK 3 CHIRALITY : 0.100 401 REMARK 3 PLANARITY : 0.010 435 REMARK 3 DIHEDRAL : 22.245 866 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 0:56) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1268 53.3331 32.6917 REMARK 3 T TENSOR REMARK 3 T11: 0.2759 T22: 0.2216 REMARK 3 T33: 0.3087 T12: 0.0641 REMARK 3 T13: 0.0997 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 3.4875 L22: 3.3069 REMARK 3 L33: 2.1205 L12: -0.5949 REMARK 3 L13: -0.2981 L23: -0.7138 REMARK 3 S TENSOR REMARK 3 S11: -0.2205 S12: -0.5036 S13: -0.0113 REMARK 3 S21: 0.6908 S22: 0.1380 S23: 0.6114 REMARK 3 S31: -0.1634 S32: -0.1943 S33: 0.0656 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 57:146) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9438 40.0356 25.3714 REMARK 3 T TENSOR REMARK 3 T11: 0.1062 T22: 0.1024 REMARK 3 T33: 0.0592 T12: -0.0048 REMARK 3 T13: 0.0245 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.4516 L22: 2.6791 REMARK 3 L33: 1.0942 L12: 0.0076 REMARK 3 L13: 0.4661 L23: 0.2685 REMARK 3 S TENSOR REMARK 3 S11: -0.0201 S12: -0.1076 S13: 0.0661 REMARK 3 S21: 0.1714 S22: -0.0105 S23: 0.0930 REMARK 3 S31: -0.0027 S32: -0.0495 S33: -0.0039 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 147:188) REMARK 3 ORIGIN FOR THE GROUP (A): 22.8735 18.9691 41.4992 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.1170 REMARK 3 T33: 0.0666 T12: 0.0257 REMARK 3 T13: -0.0146 T23: 0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.5173 L22: 1.2017 REMARK 3 L33: 3.4740 L12: 0.4614 REMARK 3 L13: -2.2228 L23: -0.5075 REMARK 3 S TENSOR REMARK 3 S11: -0.0675 S12: -0.3231 S13: -0.0464 REMARK 3 S21: 0.1839 S22: 0.0216 S23: -0.0574 REMARK 3 S31: 0.1764 S32: 0.0630 S33: 0.0389 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 189:251) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1437 29.8765 22.6759 REMARK 3 T TENSOR REMARK 3 T11: 0.0903 T22: 0.0963 REMARK 3 T33: 0.0487 T12: 0.0014 REMARK 3 T13: 0.0186 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.2292 L22: 2.7616 REMARK 3 L33: 0.7024 L12: 0.3071 REMARK 3 L13: 0.7285 L23: 0.1465 REMARK 3 S TENSOR REMARK 3 S11: 0.0037 S12: 0.0544 S13: 0.0333 REMARK 3 S21: -0.0517 S22: -0.0395 S23: 0.0963 REMARK 3 S31: 0.0495 S32: -0.0071 S33: 0.0303 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 252:295) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4907 23.2498 39.4299 REMARK 3 T TENSOR REMARK 3 T11: 0.1377 T22: 0.1293 REMARK 3 T33: 0.0920 T12: -0.0002 REMARK 3 T13: 0.0068 T23: 0.0250 REMARK 3 L TENSOR REMARK 3 L11: 2.4559 L22: 1.0820 REMARK 3 L33: 5.3661 L12: -0.9639 REMARK 3 L13: -2.6456 L23: 1.8313 REMARK 3 S TENSOR REMARK 3 S11: 0.1318 S12: -0.0437 S13: 0.0973 REMARK 3 S21: 0.1211 S22: -0.0247 S23: -0.0415 REMARK 3 S31: -0.0507 S32: -0.2624 S33: -0.1102 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226579. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39085 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 88.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.68800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M AMMONIUM SULFATE, 2% PEG 400, 0.1 REMARK 280 M HEPES PH 7.5, 1% TREHALOSE, 5 MM AZITHROMYCIN, 5 MM GMP-PNP, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.77800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.20450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.50100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.20450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.77800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.50100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 296 REMARK 465 GLU A 297 REMARK 465 ARG A 298 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 673 O HOH A 707 1.93 REMARK 500 OD1 ASP A 75 O HOH A 401 2.09 REMARK 500 O HOH A 414 O HOH A 575 2.11 REMARK 500 O HOH A 449 O HOH A 613 2.14 REMARK 500 OD1 ASP A 6 O HOH A 402 2.15 REMARK 500 OE2 GLU A 63 O HOH A 403 2.17 REMARK 500 O HOH A 724 O HOH A 732 2.18 REMARK 500 O HOH A 607 O HOH A 702 2.18 REMARK 500 OD1 ASP A 158 O HOH A 404 2.19 REMARK 500 O HOH A 630 O HOH A 637 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 636 O HOH A 760 3645 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 75 32.02 -93.03 REMARK 500 GLU A 196 51.95 -146.03 REMARK 500 ASP A 214 78.44 66.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 214 OD2 REMARK 620 2 GDP A 302 O1B 93.8 REMARK 620 3 GDP A 302 O2A 102.9 85.8 REMARK 620 4 HOH A 475 O 173.0 85.5 84.0 REMARK 620 5 HOH A 494 O 79.4 81.5 167.2 93.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDP A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZIT A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZIT A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PGE A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 312 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP95086 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 5UXB RELATED DB: PDB REMARK 900 RELATED ID: 5UXD RELATED DB: PDB REMARK 900 RELATED ID: 5UXA RELATED DB: PDB DBREF 5UXC A 1 298 UNP C7MEP1 C7MEP1_BRAFD 1 298 SEQADV 5UXC GLY A 0 UNP C7MEP1 EXPRESSION TAG SEQRES 1 A 299 GLY MSE PRO GLU ASP LEU ASP ALA LEU LEU ASP LEU ALA SEQRES 2 A 299 ALA ARG HIS GLY LEU ASP LEU ASP GLY GLY THR LEU ARG SEQRES 3 A 299 THR GLU GLU ILE GLY LEU ASP PHE ARG VAL ALA PHE ALA SEQRES 4 A 299 ARG ALA HIS ASP GLY GLY ASP TRP VAL LEU ARG LEU PRO SEQRES 5 A 299 ARG ARG PRO ASP VAL LEU GLU ARG ALA ALA VAL GLU GLY SEQRES 6 A 299 ARG LEU LEU ALA MSE LEU ALA PRO HIS LEU ASP VAL ALA SEQRES 7 A 299 VAL PRO ASP TRP ARG ILE SER THR SER GLU LEU ILE ALA SEQRES 8 A 299 TYR PRO LEU LEU PRO GLY SER PRO GLY LEU THR VAL ALA SEQRES 9 A 299 ALA ASP GLY GLU VAL SER TRP HIS VAL ASP MSE ALA SER SEQRES 10 A 299 THR VAL TYR ALA ARG SER LEU GLY SER VAL VAL ALA GLN SEQRES 11 A 299 LEU HIS ALA VAL ASP ALA GLU ALA ALA ALA ALA THR GLY SEQRES 12 A 299 ILE GLU VAL ARG SER PRO ALA GLN VAL ARG GLY ALA TRP SEQRES 13 A 299 ARG GLN ASP LEU ALA ARG VAL GLY ALA GLU PHE GLU ILE SEQRES 14 A 299 ALA PRO ALA LEU ARG GLU ARG TRP GLU ALA TRP LEU ALA SEQRES 15 A 299 ASP ASP GLY CYS TRP PRO GLY HIS SER VAL LEU THR HIS SEQRES 16 A 299 GLY GLU LEU TYR PRO ALA HIS THR LEU VAL GLU ASP GLU SEQRES 17 A 299 ARG ILE THR ALA VAL LEU ASP TRP THR THR ALA ALA VAL SEQRES 18 A 299 GLY ASP PRO ALA LYS ASP LEU MSE PHE HIS GLN VAL SER SEQRES 19 A 299 ALA PRO SER ALA ILE PHE GLU VAL ALA LEU GLN ALA TYR SEQRES 20 A 299 ALA GLU GLY GLY GLY ARG PRO TRP PRO GLY LEU ALA ARG SEQRES 21 A 299 HIS CYS THR GLU MSE PHE SER ALA ALA PRO LEU GLY TYR SEQRES 22 A 299 GLY LEU TYR ALA LEU ALA THR GLY GLU ALA ALA HIS ARG SEQRES 23 A 299 GLU ALA ALA ALA ALA ALA LEU ASN PRO PRO GLU GLU ARG MODRES 5UXC MSE A 1 MET MODIFIED RESIDUE MODRES 5UXC MSE A 69 MET MODIFIED RESIDUE MODRES 5UXC MSE A 114 MET MODIFIED RESIDUE MODRES 5UXC MSE A 228 MET MODIFIED RESIDUE MODRES 5UXC MSE A 264 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 69 8 HET MSE A 114 8 HET MSE A 228 8 HET MSE A 264 8 HET MG A 301 1 HET GDP A 302 28 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET ZIT A 306 52 HET ZIT A 307 52 HET PO4 A 308 5 HET CL A 309 1 HET CL A 310 1 HET PGE A 311 10 HET GOL A 312 6 HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM SO4 SULFATE ION HETNAM ZIT AZITHROMYCIN HETNAM PO4 PHOSPHATE ION HETNAM CL CHLORIDE ION HETNAM PGE TRIETHYLENE GLYCOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 MG MG 2+ FORMUL 3 GDP C10 H15 N5 O11 P2 FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 ZIT 2(C38 H72 N2 O12) FORMUL 9 PO4 O4 P 3- FORMUL 10 CL 2(CL 1-) FORMUL 12 PGE C6 H14 O4 FORMUL 13 GOL C3 H8 O3 FORMUL 14 HOH *465(H2 O) HELIX 1 AA1 ASP A 4 HIS A 15 1 12 HELIX 2 AA2 ASP A 20 LEU A 24 5 5 HELIX 3 AA3 ARG A 53 ASP A 55 5 3 HELIX 4 AA4 VAL A 56 ALA A 71 1 16 HELIX 5 AA5 PRO A 72 LEU A 74 5 3 HELIX 6 AA6 SER A 116 ALA A 132 1 17 HELIX 7 AA7 ASP A 134 ALA A 140 1 7 HELIX 8 AA8 SER A 147 PHE A 166 1 20 HELIX 9 AA9 ALA A 169 ASP A 182 1 14 HELIX 10 AB1 ASP A 183 TRP A 186 5 4 HELIX 11 AB2 ASP A 222 ASP A 226 5 5 HELIX 12 AB3 LEU A 227 ALA A 234 1 8 HELIX 13 AB4 PRO A 235 GLY A 249 1 15 HELIX 14 AB5 GLY A 256 ALA A 267 1 12 HELIX 15 AB6 ALA A 267 GLY A 280 1 14 HELIX 16 AB7 GLU A 281 ASN A 293 1 13 SHEET 1 AA1 5 ARG A 25 ILE A 29 0 SHEET 2 AA1 5 PHE A 33 ARG A 39 -1 O VAL A 35 N GLU A 28 SHEET 3 AA1 5 ASP A 45 PRO A 51 -1 O LEU A 50 N ARG A 34 SHEET 4 AA1 5 ILE A 89 PRO A 92 -1 O ILE A 89 N ARG A 49 SHEET 5 AA1 5 ILE A 83 SER A 84 -1 N ILE A 83 O ALA A 90 SHEET 1 AA2 3 SER A 97 PRO A 98 0 SHEET 2 AA2 3 THR A 202 GLU A 205 -1 O VAL A 204 N SER A 97 SHEET 3 AA2 3 ARG A 208 VAL A 212 -1 O THR A 210 N LEU A 203 SHEET 1 AA3 2 LEU A 100 VAL A 102 0 SHEET 2 AA3 2 VAL A 108 TRP A 110 -1 O SER A 109 N THR A 101 SHEET 1 AA4 3 GLU A 144 VAL A 145 0 SHEET 2 AA4 3 ALA A 219 GLY A 221 1 O VAL A 220 N GLU A 144 SHEET 3 AA4 3 VAL A 191 THR A 193 -1 N THR A 193 O ALA A 219 LINK C GLY A 0 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N PRO A 2 1555 1555 1.33 LINK C ALA A 68 N MSE A 69 1555 1555 1.34 LINK C MSE A 69 N LEU A 70 1555 1555 1.34 LINK C ASP A 113 N MSE A 114 1555 1555 1.34 LINK C MSE A 114 N ALA A 115 1555 1555 1.34 LINK C LEU A 227 N MSE A 228 1555 1555 1.32 LINK C MSE A 228 N PHE A 229 1555 1555 1.32 LINK C GLU A 263 N MSE A 264 1555 1555 1.33 LINK C MSE A 264 N PHE A 265 1555 1555 1.35 LINK OD2 ASP A 214 MG MG A 301 1555 1555 2.13 LINK MG MG A 301 O1B GDP A 302 1555 1555 2.20 LINK MG MG A 301 O2A GDP A 302 1555 1555 2.02 LINK MG MG A 301 O HOH A 475 1555 1555 2.18 LINK MG MG A 301 O HOH A 494 1555 1555 2.09 SITE 1 AC1 5 HIS A 201 ASP A 214 GDP A 302 HOH A 475 SITE 2 AC1 5 HOH A 494 SITE 1 AC2 27 GLU A 28 VAL A 35 PHE A 37 ARG A 49 SITE 2 AC2 27 TYR A 91 LEU A 93 LEU A 94 GLY A 96 SITE 3 AC2 27 ALA A 200 HIS A 201 LEU A 203 LEU A 213 SITE 4 AC2 27 ASP A 214 MG A 301 PO4 A 308 HOH A 405 SITE 5 AC2 27 HOH A 437 HOH A 441 HOH A 472 HOH A 475 SITE 6 AC2 27 HOH A 476 HOH A 480 HOH A 486 HOH A 487 SITE 7 AC2 27 HOH A 494 HOH A 542 HOH A 648 SITE 1 AC3 5 ARG A 25 PRO A 235 SER A 236 HOH A 523 SITE 2 AC3 5 HOH A 644 SITE 1 AC4 7 HIS A 111 VAL A 204 GLU A 205 ASP A 206 SITE 2 AC4 7 HOH A 509 HOH A 513 HOH A 643 SITE 1 AC5 5 ARG A 259 HOH A 417 HOH A 434 HOH A 536 SITE 2 AC5 5 HOH A 543 SITE 1 AC6 8 THR A 23 ALA A 38 ARG A 39 ASP A 45 SITE 2 AC6 8 GLY A 96 HOH A 460 HOH A 711 HOH A 784 SITE 1 AC7 19 ALA A 71 LEU A 74 ASP A 75 VAL A 76 SITE 2 AC7 19 ALA A 181 ASP A 182 ASP A 183 GLU A 205 SITE 3 AC7 19 THR A 210 THR A 279 GLY A 280 HOH A 428 SITE 4 AC7 19 HOH A 468 HOH A 477 HOH A 555 HOH A 573 SITE 5 AC7 19 HOH A 603 HOH A 605 HOH A 658 SITE 1 AC8 8 GLY A 30 LEU A 31 ASP A 32 GDP A 302 SITE 2 AC8 8 HOH A 472 HOH A 486 HOH A 487 HOH A 494 SITE 1 AC9 2 ARG A 52 HOH A 745 SITE 1 AD1 3 ASP A 222 LYS A 225 GOL A 312 SITE 1 AD2 3 GLY A 195 HOH A 459 HOH A 471 SITE 1 AD3 5 TRP A 155 ASP A 158 CL A 310 HOH A 411 SITE 2 AD3 5 HOH A 427 CRYST1 49.556 77.002 94.409 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020179 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012987 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010592 0.00000