HEADER HYDROLASE 23-FEB-17 5UY1 TITLE X-RAY CRYSTAL STRUCTURE OF APO HALOTAG COMPND MOL_ID: 1; COMPND 2 MOLECULE: HALOALKANE DEHALOGENASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.8.1.5; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOCOCCUS RHODOCHROUS; SOURCE 3 ORGANISM_TAXID: 1829; SOURCE 4 GENE: DHAA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET29B KEYWDS HALOALKANE DEHALOGENASE, FLUOROGENIC, HALO, TAG, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR N.P.DUNHAM,A.K.BOAL REVDAT 4 06-MAR-24 5UY1 1 REMARK REVDAT 3 22-NOV-17 5UY1 1 REMARK REVDAT 2 05-APR-17 5UY1 1 JRNL REVDAT 1 08-MAR-17 5UY1 0 JRNL AUTH Y.LIU,K.MIAO,N.P.DUNHAM,H.LIU,M.FARES,A.K.BOAL,X.LI,X.ZHANG JRNL TITL THE CATION-PI INTERACTION ENABLES A HALO-TAG FLUOROGENIC JRNL TITL 2 PROBE FOR FAST NO-WASH LIVE CELL IMAGING AND GEL-FREE JRNL TITL 3 PROTEIN QUANTIFICATION. JRNL REF BIOCHEMISTRY V. 56 1585 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 28221782 JRNL DOI 10.1021/ACS.BIOCHEM.7B00056 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 133179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7029 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7030 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 70.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 390 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4656 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 437 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.11000 REMARK 3 B22 (A**2) : 0.02000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.056 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.053 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.035 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.853 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4841 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4558 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6613 ; 0.997 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10499 ; 0.740 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 582 ; 4.684 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 228 ;28.752 ;23.333 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 737 ;11.406 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 34 ;15.107 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 703 ; 0.057 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5418 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1120 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5UY1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226588. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000, SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 144106 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NACL, AMMONIUM SULFATE, PH 7.5, REMARK 280 EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.53850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.99650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 47.31400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.99650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.53850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 47.31400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 294 REMARK 465 ILE A 295 REMARK 465 SER A 296 REMARK 465 GLY A 297 REMARK 465 LEU A 298 REMARK 465 GLU A 299 REMARK 465 HIS A 300 REMARK 465 HIS A 301 REMARK 465 HIS A 302 REMARK 465 HIS A 303 REMARK 465 HIS A 304 REMARK 465 HIS A 305 REMARK 465 GLU B 294 REMARK 465 ILE B 295 REMARK 465 SER B 296 REMARK 465 GLY B 297 REMARK 465 LEU B 298 REMARK 465 GLU B 299 REMARK 465 HIS B 300 REMARK 465 HIS B 301 REMARK 465 HIS B 302 REMARK 465 HIS B 303 REMARK 465 HIS B 304 REMARK 465 HIS B 305 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 214 CG GLU A 214 CD -0.121 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 42 44.58 -107.59 REMARK 500 GLU A 98 -95.01 -103.10 REMARK 500 ASP A 106 -133.68 58.34 REMARK 500 GLU A 130 63.39 37.89 REMARK 500 ARG A 153 49.29 -86.48 REMARK 500 VAL A 245 -73.30 -138.04 REMARK 500 LEU A 271 -101.12 -118.57 REMARK 500 PRO B 42 44.45 -108.04 REMARK 500 GLU B 98 -93.19 -102.84 REMARK 500 ASP B 106 -134.51 57.23 REMARK 500 GLU B 130 62.60 39.84 REMARK 500 ASP B 156 -53.10 71.32 REMARK 500 VAL B 245 -69.31 -133.39 REMARK 500 LEU B 271 -97.48 -117.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5UXZ RELATED DB: PDB DBREF 5UY1 A 4 290 UNP P0A3G2 DHAA_RHORH 4 290 DBREF 5UY1 B 4 290 UNP P0A3G2 DHAA_RHORH 4 290 SEQADV 5UY1 VAL A 47 UNP P0A3G2 LEU 47 CONFLICT SEQADV 5UY1 THR A 58 UNP P0A3G2 SER 58 CONFLICT SEQADV 5UY1 GLY A 78 UNP P0A3G2 ASP 78 CONFLICT SEQADV 5UY1 PHE A 87 UNP P0A3G2 TYR 87 CONFLICT SEQADV 5UY1 MET A 88 UNP P0A3G2 LEU 88 CONFLICT SEQADV 5UY1 PHE A 128 UNP P0A3G2 CYS 128 CONFLICT SEQADV 5UY1 THR A 155 UNP P0A3G2 ALA 155 CONFLICT SEQADV 5UY1 LYS A 160 UNP P0A3G2 GLU 160 CONFLICT SEQADV 5UY1 VAL A 167 UNP P0A3G2 ALA 167 CONFLICT SEQADV 5UY1 THR A 172 UNP P0A3G2 ALA 172 CONFLICT SEQADV 5UY1 MET A 175 UNP P0A3G2 LYS 175 CONFLICT SEQADV 5UY1 GLY A 176 UNP P0A3G2 CYS 176 CONFLICT SEQADV 5UY1 ASN A 195 UNP P0A3G2 LYS 195 CONFLICT SEQADV 5UY1 GLU A 224 UNP P0A3G2 ALA 224 CONFLICT SEQADV 5UY1 ASP A 227 UNP P0A3G2 ASN 227 CONFLICT SEQADV 5UY1 LYS A 257 UNP P0A3G2 GLU 257 CONFLICT SEQADV 5UY1 ALA A 264 UNP P0A3G2 THR 264 CONFLICT SEQADV 5UY1 ASN A 272 UNP P0A3G2 HIS 272 CONFLICT SEQADV 5UY1 LEU A 273 UNP P0A3G2 TYR 273 CONFLICT SEQADV 5UY1 SER A 291 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 THR A 292 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 LEU A 293 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLU A 294 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 ILE A 295 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 SER A 296 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLY A 297 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 LEU A 298 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLU A 299 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 300 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 301 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 302 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 303 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 304 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS A 305 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 VAL B 47 UNP P0A3G2 LEU 47 CONFLICT SEQADV 5UY1 THR B 58 UNP P0A3G2 SER 58 CONFLICT SEQADV 5UY1 GLY B 78 UNP P0A3G2 ASP 78 CONFLICT SEQADV 5UY1 PHE B 87 UNP P0A3G2 TYR 87 CONFLICT SEQADV 5UY1 MET B 88 UNP P0A3G2 LEU 88 CONFLICT SEQADV 5UY1 PHE B 128 UNP P0A3G2 CYS 128 CONFLICT SEQADV 5UY1 THR B 155 UNP P0A3G2 ALA 155 CONFLICT SEQADV 5UY1 LYS B 160 UNP P0A3G2 GLU 160 CONFLICT SEQADV 5UY1 VAL B 167 UNP P0A3G2 ALA 167 CONFLICT SEQADV 5UY1 THR B 172 UNP P0A3G2 ALA 172 CONFLICT SEQADV 5UY1 MET B 175 UNP P0A3G2 LYS 175 CONFLICT SEQADV 5UY1 GLY B 176 UNP P0A3G2 CYS 176 CONFLICT SEQADV 5UY1 ASN B 195 UNP P0A3G2 LYS 195 CONFLICT SEQADV 5UY1 GLU B 224 UNP P0A3G2 ALA 224 CONFLICT SEQADV 5UY1 ASP B 227 UNP P0A3G2 ASN 227 CONFLICT SEQADV 5UY1 LYS B 257 UNP P0A3G2 GLU 257 CONFLICT SEQADV 5UY1 ALA B 264 UNP P0A3G2 THR 264 CONFLICT SEQADV 5UY1 ASN B 272 UNP P0A3G2 HIS 272 CONFLICT SEQADV 5UY1 LEU B 273 UNP P0A3G2 TYR 273 CONFLICT SEQADV 5UY1 SER B 291 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 THR B 292 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 LEU B 293 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLU B 294 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 ILE B 295 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 SER B 296 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLY B 297 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 LEU B 298 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 GLU B 299 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 300 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 301 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 302 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 303 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 304 UNP P0A3G2 EXPRESSION TAG SEQADV 5UY1 HIS B 305 UNP P0A3G2 EXPRESSION TAG SEQRES 1 A 302 ILE GLY THR GLY PHE PRO PHE ASP PRO HIS TYR VAL GLU SEQRES 2 A 302 VAL LEU GLY GLU ARG MET HIS TYR VAL ASP VAL GLY PRO SEQRES 3 A 302 ARG ASP GLY THR PRO VAL LEU PHE LEU HIS GLY ASN PRO SEQRES 4 A 302 THR SER SER TYR VAL TRP ARG ASN ILE ILE PRO HIS VAL SEQRES 5 A 302 ALA PRO THR HIS ARG CYS ILE ALA PRO ASP LEU ILE GLY SEQRES 6 A 302 MET GLY LYS SER ASP LYS PRO ASP LEU GLY TYR PHE PHE SEQRES 7 A 302 ASP ASP HIS VAL ARG PHE MET ASP ALA PHE ILE GLU ALA SEQRES 8 A 302 LEU GLY LEU GLU GLU VAL VAL LEU VAL ILE HIS ASP TRP SEQRES 9 A 302 GLY SER ALA LEU GLY PHE HIS TRP ALA LYS ARG ASN PRO SEQRES 10 A 302 GLU ARG VAL LYS GLY ILE ALA PHE MET GLU PHE ILE ARG SEQRES 11 A 302 PRO ILE PRO THR TRP ASP GLU TRP PRO GLU PHE ALA ARG SEQRES 12 A 302 GLU THR PHE GLN ALA PHE ARG THR THR ASP VAL GLY ARG SEQRES 13 A 302 LYS LEU ILE ILE ASP GLN ASN VAL PHE ILE GLU GLY THR SEQRES 14 A 302 LEU PRO MET GLY VAL VAL ARG PRO LEU THR GLU VAL GLU SEQRES 15 A 302 MET ASP HIS TYR ARG GLU PRO PHE LEU ASN PRO VAL ASP SEQRES 16 A 302 ARG GLU PRO LEU TRP ARG PHE PRO ASN GLU LEU PRO ILE SEQRES 17 A 302 ALA GLY GLU PRO ALA ASN ILE VAL ALA LEU VAL GLU GLU SEQRES 18 A 302 TYR MET ASP TRP LEU HIS GLN SER PRO VAL PRO LYS LEU SEQRES 19 A 302 LEU PHE TRP GLY THR PRO GLY VAL LEU ILE PRO PRO ALA SEQRES 20 A 302 GLU ALA ALA ARG LEU ALA LYS SER LEU PRO ASN CYS LYS SEQRES 21 A 302 ALA VAL ASP ILE GLY PRO GLY LEU ASN LEU LEU GLN GLU SEQRES 22 A 302 ASP ASN PRO ASP LEU ILE GLY SER GLU ILE ALA ARG TRP SEQRES 23 A 302 LEU SER THR LEU GLU ILE SER GLY LEU GLU HIS HIS HIS SEQRES 24 A 302 HIS HIS HIS SEQRES 1 B 302 ILE GLY THR GLY PHE PRO PHE ASP PRO HIS TYR VAL GLU SEQRES 2 B 302 VAL LEU GLY GLU ARG MET HIS TYR VAL ASP VAL GLY PRO SEQRES 3 B 302 ARG ASP GLY THR PRO VAL LEU PHE LEU HIS GLY ASN PRO SEQRES 4 B 302 THR SER SER TYR VAL TRP ARG ASN ILE ILE PRO HIS VAL SEQRES 5 B 302 ALA PRO THR HIS ARG CYS ILE ALA PRO ASP LEU ILE GLY SEQRES 6 B 302 MET GLY LYS SER ASP LYS PRO ASP LEU GLY TYR PHE PHE SEQRES 7 B 302 ASP ASP HIS VAL ARG PHE MET ASP ALA PHE ILE GLU ALA SEQRES 8 B 302 LEU GLY LEU GLU GLU VAL VAL LEU VAL ILE HIS ASP TRP SEQRES 9 B 302 GLY SER ALA LEU GLY PHE HIS TRP ALA LYS ARG ASN PRO SEQRES 10 B 302 GLU ARG VAL LYS GLY ILE ALA PHE MET GLU PHE ILE ARG SEQRES 11 B 302 PRO ILE PRO THR TRP ASP GLU TRP PRO GLU PHE ALA ARG SEQRES 12 B 302 GLU THR PHE GLN ALA PHE ARG THR THR ASP VAL GLY ARG SEQRES 13 B 302 LYS LEU ILE ILE ASP GLN ASN VAL PHE ILE GLU GLY THR SEQRES 14 B 302 LEU PRO MET GLY VAL VAL ARG PRO LEU THR GLU VAL GLU SEQRES 15 B 302 MET ASP HIS TYR ARG GLU PRO PHE LEU ASN PRO VAL ASP SEQRES 16 B 302 ARG GLU PRO LEU TRP ARG PHE PRO ASN GLU LEU PRO ILE SEQRES 17 B 302 ALA GLY GLU PRO ALA ASN ILE VAL ALA LEU VAL GLU GLU SEQRES 18 B 302 TYR MET ASP TRP LEU HIS GLN SER PRO VAL PRO LYS LEU SEQRES 19 B 302 LEU PHE TRP GLY THR PRO GLY VAL LEU ILE PRO PRO ALA SEQRES 20 B 302 GLU ALA ALA ARG LEU ALA LYS SER LEU PRO ASN CYS LYS SEQRES 21 B 302 ALA VAL ASP ILE GLY PRO GLY LEU ASN LEU LEU GLN GLU SEQRES 22 B 302 ASP ASN PRO ASP LEU ILE GLY SER GLU ILE ALA ARG TRP SEQRES 23 B 302 LEU SER THR LEU GLU ILE SER GLY LEU GLU HIS HIS HIS SEQRES 24 B 302 HIS HIS HIS HET EDO A 401 4 HET EDO A 402 4 HET EDO A 403 4 HET CL A 404 1 HET EDO B 401 4 HET EDO B 402 4 HET CL B 403 1 HET CL B 404 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 5(C2 H6 O2) FORMUL 6 CL 3(CL 1-) FORMUL 11 HOH *437(H2 O) HELIX 1 AA1 SER A 44 ARG A 49 5 6 HELIX 2 AA2 ILE A 51 ALA A 56 1 6 HELIX 3 AA3 PHE A 80 LEU A 95 1 16 HELIX 4 AA4 ASP A 106 ASN A 119 1 14 HELIX 5 AA5 THR A 137 TRP A 141 5 5 HELIX 6 AA6 PRO A 142 PHE A 144 5 3 HELIX 7 AA7 ALA A 145 ARG A 153 1 9 HELIX 8 AA8 THR A 155 ILE A 163 1 9 HELIX 9 AA9 ASN A 166 GLY A 171 1 6 HELIX 10 AB1 GLY A 171 GLY A 176 1 6 HELIX 11 AB2 THR A 182 GLU A 191 1 10 HELIX 12 AB3 PRO A 192 LEU A 194 5 3 HELIX 13 AB4 ASN A 195 ASP A 198 5 4 HELIX 14 AB5 ARG A 199 LEU A 209 1 11 HELIX 15 AB6 PRO A 215 SER A 232 1 18 HELIX 16 AB7 PRO A 248 LEU A 259 1 12 HELIX 17 AB8 LEU A 273 ASN A 278 1 6 HELIX 18 AB9 ASN A 278 LEU A 293 1 16 HELIX 19 AC1 SER B 44 ARG B 49 5 6 HELIX 20 AC2 ILE B 51 ALA B 56 1 6 HELIX 21 AC3 PHE B 80 LEU B 95 1 16 HELIX 22 AC4 ASP B 106 ASN B 119 1 14 HELIX 23 AC5 THR B 137 TRP B 141 5 5 HELIX 24 AC6 PRO B 142 PHE B 144 5 3 HELIX 25 AC7 ALA B 145 ARG B 153 1 9 HELIX 26 AC8 ASP B 156 ILE B 163 1 8 HELIX 27 AC9 ASN B 166 GLY B 171 1 6 HELIX 28 AD1 GLY B 171 GLY B 176 1 6 HELIX 29 AD2 THR B 182 GLU B 191 1 10 HELIX 30 AD3 PRO B 192 LEU B 194 5 3 HELIX 31 AD4 ASN B 195 ASP B 198 5 4 HELIX 32 AD5 ARG B 199 LEU B 209 1 11 HELIX 33 AD6 PRO B 215 SER B 232 1 18 HELIX 34 AD7 PRO B 248 LEU B 259 1 12 HELIX 35 AD8 LEU B 273 ASN B 278 1 6 HELIX 36 AD9 ASN B 278 LEU B 293 1 16 SHEET 1 AA1 8 HIS A 13 VAL A 17 0 SHEET 2 AA1 8 GLU A 20 VAL A 27 -1 O GLU A 20 N VAL A 17 SHEET 3 AA1 8 CYS A 61 PRO A 64 -1 O CYS A 61 N VAL A 27 SHEET 4 AA1 8 VAL A 35 LEU A 38 1 N PHE A 37 O ILE A 62 SHEET 5 AA1 8 VAL A 100 HIS A 105 1 O VAL A 101 N LEU A 36 SHEET 6 AA1 8 VAL A 123 MET A 129 1 O ALA A 127 N LEU A 102 SHEET 7 AA1 8 LYS A 236 PRO A 243 1 O LEU A 237 N PHE A 128 SHEET 8 AA1 8 CYS A 262 GLY A 270 1 O VAL A 265 N LEU A 238 SHEET 1 AA2 8 HIS B 13 VAL B 17 0 SHEET 2 AA2 8 GLU B 20 VAL B 27 -1 O GLU B 20 N VAL B 17 SHEET 3 AA2 8 CYS B 61 PRO B 64 -1 O CYS B 61 N VAL B 27 SHEET 4 AA2 8 VAL B 35 LEU B 38 1 N PHE B 37 O ILE B 62 SHEET 5 AA2 8 VAL B 100 HIS B 105 1 O VAL B 101 N LEU B 36 SHEET 6 AA2 8 VAL B 123 MET B 129 1 O ALA B 127 N LEU B 102 SHEET 7 AA2 8 LYS B 236 PRO B 243 1 O LEU B 237 N PHE B 128 SHEET 8 AA2 8 CYS B 262 GLY B 270 1 O VAL B 265 N LEU B 238 CISPEP 1 ASN A 41 PRO A 42 0 1.15 CISPEP 2 GLU A 214 PRO A 215 0 -3.60 CISPEP 3 GLU A 214 PRO A 215 0 -3.86 CISPEP 4 THR A 242 PRO A 243 0 0.52 CISPEP 5 ASN B 41 PRO B 42 0 2.50 CISPEP 6 GLU B 214 PRO B 215 0 -5.51 CISPEP 7 THR B 242 PRO B 243 0 2.44 SITE 1 AC1 5 ASP A 26 GLY A 28 ARG A 30 PRO A 174 SITE 2 AC1 5 MET A 175 SITE 1 AC2 3 GLY A 5 THR A 6 GLY A 7 SITE 1 AC3 3 ARG A 153 ASN A 207 HOH A 525 SITE 1 AC4 3 ASN A 41 TRP A 107 PRO A 206 SITE 1 AC5 5 PHE B 149 THR B 172 GLY B 176 HOH B 520 SITE 2 AC5 5 HOH B 575 SITE 1 AC6 6 PHE B 8 SER B 45 ASP B 65 LYS B 71 SITE 2 AC6 6 HOH B 504 HOH B 513 SITE 1 AC7 3 ASN B 41 TRP B 107 PRO B 206 SITE 1 AC8 2 TRP B 228 GLN B 231 CRYST1 69.077 94.628 99.993 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014477 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010568 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010001 0.00000