HEADER DE NOVO PROTEIN 24-FEB-17 5UYO TITLE SOLUTION NMR STRUCTURE OF THE DE NOVO MINI PROTEIN HEEH_RD4_0097 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEEH_RD4_0097; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DE NOVO DESIGN, HELIX-STRAND-STRAND-HELIX, MINI PROTEIN, DE NOVO KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.LEMAK,G.J.ROCKLIN,S.HOULISTON,L.CARTER,T.M.CHIDYAUSIKU,D.BAKER, AUTHOR 2 C.H.ARROWSMITH REVDAT 4 15-MAY-24 5UYO 1 REMARK REVDAT 3 14-JUN-23 5UYO 1 REMARK REVDAT 2 07-NOV-18 5UYO 1 SOURCE REVDAT 1 26-JUL-17 5UYO 0 JRNL AUTH G.J.ROCKLIN,T.M.CHIDYAUSIKU,I.GORESHNIK,A.FORD,S.HOULISTON, JRNL AUTH 2 A.LEMAK,L.CARTER,R.RAVICHANDRAN,V.K.MULLIGAN,A.CHEVALIER, JRNL AUTH 3 C.H.ARROWSMITH,D.BAKER JRNL TITL GLOBAL ANALYSIS OF PROTEIN FOLDING USING MASSIVELY PARALLEL JRNL TITL 2 DESIGN, SYNTHESIS, AND TESTING. JRNL REF SCIENCE V. 357 168 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 28706065 JRNL DOI 10.1126/SCIENCE.AAN0693 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5UYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226634. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.4 REMARK 210 IONIC STRENGTH : 150 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 150 MM SODIUM CHLORIDE, 400 UM REMARK 210 [U-13C; U-15N] PROTEIN, 50 MM REMARK 210 SODIUM PHOSPHATE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D CBCA(CO)NH; 3D REMARK 210 HBHA(CO)NH; 3D HNCO; 3D HNCA REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, ABACUS, CYANA REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 GLY A 13 REMARK 465 LEU A 14 REMARK 465 VAL A 15 REMARK 465 PRO A 16 REMARK 465 ARG A 17 REMARK 465 GLY A 18 REMARK 465 SER A 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 MET A 64 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 37 74.06 59.82 REMARK 500 2 PRO A 39 98.11 -64.95 REMARK 500 2 ASN A 43 55.81 71.47 REMARK 500 3 ASP A 22 90.02 -69.68 REMARK 500 4 ASN A 37 80.51 62.77 REMARK 500 5 ASN A 37 76.18 61.33 REMARK 500 5 ASN A 43 55.37 79.02 REMARK 500 7 ASN A 37 78.65 57.27 REMARK 500 9 ASN A 43 53.68 71.61 REMARK 500 10 MET A 21 -16.00 -142.93 REMARK 500 10 ASP A 22 90.79 -51.16 REMARK 500 10 ASN A 43 54.98 73.69 REMARK 500 12 ASN A 37 71.48 61.24 REMARK 500 14 ASN A 37 75.46 59.41 REMARK 500 18 ASP A 22 90.60 -69.30 REMARK 500 18 ASN A 43 58.20 76.00 REMARK 500 19 ASP A 22 99.44 -69.44 REMARK 500 19 ASN A 43 54.41 70.52 REMARK 500 20 ASP A 22 96.54 -65.83 REMARK 500 20 ASN A 37 76.47 64.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30249 RELATED DB: BMRB REMARK 900 SOLUTION NMR STRUCTURE OF THE DE NOVO MINI PROTEIN HEEH_RD4_0097 DBREF 5UYO A 1 64 PDB 5UYO 5UYO 1 64 SEQRES 1 A 64 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 64 LEU VAL PRO ARG GLY SER HIS MET ASP VAL GLU GLU GLN SEQRES 3 A 64 ILE ARG ARG LEU GLU GLU VAL LEU LYS LYS ASN GLN PRO SEQRES 4 A 64 VAL THR TRP ASN GLY THR THR TYR THR ASP PRO ASN GLU SEQRES 5 A 64 ILE LYS LYS VAL ILE GLU GLU LEU ARG LYS SER MET HELIX 1 AA1 VAL A 23 ASN A 37 1 15 HELIX 2 AA2 ASP A 49 LYS A 62 1 14 SHEET 1 AA1 2 VAL A 40 THR A 41 0 SHEET 2 AA1 2 THR A 46 TYR A 47 -1 O TYR A 47 N VAL A 40 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1