HEADER TRANSFERASE 27-FEB-17 5UZQ TITLE CRYSTAL STRUCTURE OF CITRATE SYNTHASE FROM HOMO SAPIENS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CITRATE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 15-453; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.SCHLACHTER,M.CHRUSZCZ REVDAT 2 17-JUN-20 5UZQ 1 JRNL REVDAT 1 07-MAR-18 5UZQ 0 JRNL AUTH C.R.SCHLACHTER,V.KLAPPER,T.RADFORD,M.CHRUSZCZ JRNL TITL COMPARATIVE STUDIES OF ASPERGILLUS FUMIGATUS 2-METHYLCITRATE JRNL TITL 2 SYNTHASE AND HUMAN CITRATE SYNTHASE. JRNL REF BIOL.CHEM. V. 400 1567 2019 JRNL REFN ISSN 1431-6730 JRNL PMID 31141475 JRNL DOI 10.1515/HSZ-2019-0106 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 NUMBER OF REFLECTIONS : 29021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1551 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.16 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.22 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1907 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 84.19 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3360 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3426 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 159 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.48000 REMARK 3 B22 (A**2) : 2.48000 REMARK 3 B33 (A**2) : -4.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.218 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.184 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3511 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3245 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4764 ; 1.474 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7533 ; 3.726 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 433 ; 5.809 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;37.894 ;23.961 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 590 ;13.640 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;16.994 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 523 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3884 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 711 ; 0.006 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1735 ; 0.984 ; 2.754 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1734 ; 0.982 ; 2.752 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2167 ; 1.666 ; 4.126 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2168 ; 1.666 ; 4.128 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1775 ; 1.087 ; 2.887 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1775 ; 1.087 ; 2.887 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2598 ; 1.835 ; 4.269 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 14448 ; 4.317 ;51.344 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 14368 ; 4.261 ;51.137 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 73 REMARK 3 ORIGIN FOR THE GROUP (A): -39.3510 -19.4790 3.1450 REMARK 3 T TENSOR REMARK 3 T11: 0.1276 T22: 0.9364 REMARK 3 T33: 0.0762 T12: -0.3358 REMARK 3 T13: 0.0095 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 1.0801 L22: 3.5619 REMARK 3 L33: 5.1528 L12: -0.0082 REMARK 3 L13: 0.3313 L23: -0.2833 REMARK 3 S TENSOR REMARK 3 S11: 0.0313 S12: -0.0747 S13: 0.0296 REMARK 3 S21: 0.1366 S22: 0.0610 S23: 0.4436 REMARK 3 S31: 0.7096 S32: -2.0139 S33: -0.0922 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 74 A 305 REMARK 3 ORIGIN FOR THE GROUP (A): -25.2460 -3.8960 -5.9810 REMARK 3 T TENSOR REMARK 3 T11: 0.1218 T22: 0.2853 REMARK 3 T33: 0.1400 T12: 0.0468 REMARK 3 T13: 0.0246 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.4457 L22: 0.7790 REMARK 3 L33: 3.5980 L12: -0.0297 REMARK 3 L13: 0.3523 L23: 0.2237 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.0214 S13: 0.1047 REMARK 3 S21: -0.0603 S22: 0.0264 S23: -0.0027 REMARK 3 S31: -0.4473 S32: -0.8226 S33: -0.0168 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 306 A 329 REMARK 3 ORIGIN FOR THE GROUP (A): -19.2400 -16.1410 -36.9710 REMARK 3 T TENSOR REMARK 3 T11: 0.0700 T22: 0.2269 REMARK 3 T33: 0.1427 T12: -0.0437 REMARK 3 T13: 0.0069 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 3.4060 L22: 1.1908 REMARK 3 L33: 11.7151 L12: 0.8384 REMARK 3 L13: 5.1204 L23: 1.9662 REMARK 3 S TENSOR REMARK 3 S11: 0.0083 S12: 0.3430 S13: -0.0133 REMARK 3 S21: 0.2310 S22: 0.0396 S23: -0.0444 REMARK 3 S31: 0.3652 S32: 0.4140 S33: -0.0479 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 330 A 397 REMARK 3 ORIGIN FOR THE GROUP (A): -29.6100 -17.3330 -31.0840 REMARK 3 T TENSOR REMARK 3 T11: 0.0955 T22: 0.4058 REMARK 3 T33: 0.0671 T12: -0.1452 REMARK 3 T13: -0.0468 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.9485 L22: 3.2027 REMARK 3 L33: 4.1296 L12: 0.8916 REMARK 3 L13: 0.1198 L23: 0.1759 REMARK 3 S TENSOR REMARK 3 S11: 0.0522 S12: 0.1280 S13: -0.0062 REMARK 3 S21: -0.0039 S22: -0.0450 S23: -0.0425 REMARK 3 S31: 0.3022 S32: -0.7104 S33: -0.0072 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 398 A 463 REMARK 3 ORIGIN FOR THE GROUP (A): -24.8330 -17.3920 -7.8040 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.3080 REMARK 3 T33: 0.1420 T12: -0.1567 REMARK 3 T13: 0.0015 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 0.4025 L22: 0.2869 REMARK 3 L33: 3.5216 L12: 0.1988 REMARK 3 L13: 0.0793 L23: 0.2665 REMARK 3 S TENSOR REMARK 3 S11: 0.0164 S12: 0.0563 S13: -0.0294 REMARK 3 S21: -0.0088 S22: 0.0269 S23: -0.0066 REMARK 3 S31: 0.3513 S32: -0.8885 S33: -0.0432 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5UZQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226386. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29021 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 25.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.6 REMARK 200 DATA REDUNDANCY IN SHELL : 8.50 REMARK 200 R MERGE FOR SHELL (I) : 0.32300 REMARK 200 R SYM FOR SHELL (I) : 0.32300 REMARK 200 FOR SHELL : 3.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SUCCINIC ACID PH 7.0, 12% REMARK 280 PEG3350, VAPOR DIFFUSION, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 99.38200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.38000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.38000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 49.69100 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.38000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.38000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 149.07300 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.38000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.38000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 49.69100 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.38000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.38000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 149.07300 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.38200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -64.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 599 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 610 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 GLY A 14 REMARK 465 VAL A 15 REMARK 465 ASP A 16 REMARK 465 LEU A 17 REMARK 465 GLY A 18 REMARK 465 THR A 19 REMARK 465 GLU A 20 REMARK 465 ASN A 21 REMARK 465 LEU A 22 REMARK 465 TYR A 23 REMARK 465 PHE A 24 REMARK 465 GLN A 25 REMARK 465 SER A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 SER A 29 REMARK 465 LYS A 464 REMARK 465 SER A 465 REMARK 465 GLY A 466 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 49 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 62 NE2 GLN A 62 7555 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 368 CA - CB - CG ANGL. DEV. = 14.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 112 11.67 -142.08 REMARK 500 HIS A 265 69.35 -154.99 REMARK 500 GLU A 266 179.34 63.71 REMARK 500 VAL A 349 -60.17 -121.75 REMARK 500 LEU A 368 49.81 -152.13 REMARK 500 ARG A 448 76.82 -151.62 REMARK 500 REMARK 500 REMARK: NULL DBREF 5UZQ A 28 466 UNP B4DJV2 B4DJV2_HUMAN 15 453 SEQADV 5UZQ MET A 5 UNP B4DJV2 INITIATING METHIONINE SEQADV 5UZQ HIS A 6 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ HIS A 7 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ HIS A 8 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ HIS A 9 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ HIS A 10 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ HIS A 11 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ SER A 12 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ SER A 13 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ GLY A 14 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ VAL A 15 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ ASP A 16 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ LEU A 17 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ GLY A 18 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ THR A 19 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ GLU A 20 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ ASN A 21 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ LEU A 22 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ TYR A 23 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ PHE A 24 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ GLN A 25 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ SER A 26 UNP B4DJV2 EXPRESSION TAG SEQADV 5UZQ ASN A 27 UNP B4DJV2 EXPRESSION TAG SEQRES 1 A 462 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 462 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA SER SER SEQRES 3 A 462 THR ASN LEU LYS ASP ILE LEU ALA ASP LEU ILE PRO LYS SEQRES 4 A 462 GLU GLN ALA ARG ILE LYS THR PHE ARG GLN GLN HIS GLY SEQRES 5 A 462 LYS THR VAL VAL GLY GLN ILE THR VAL ASP MET MET TYR SEQRES 6 A 462 GLY GLY MET ARG GLY MET LYS GLY LEU VAL TYR GLU THR SEQRES 7 A 462 SER VAL LEU ASP PRO ASP GLU GLY ILE ARG PHE ARG GLY SEQRES 8 A 462 PHE SER ILE PRO GLU CYS GLN LYS LEU LEU PRO LYS ALA SEQRES 9 A 462 LYS GLY GLY GLU GLU PRO LEU PRO GLU GLY LEU PHE TRP SEQRES 10 A 462 LEU LEU VAL THR GLY HIS ILE PRO THR GLU GLU GLN VAL SEQRES 11 A 462 SER TRP LEU SER LYS GLU TRP ALA LYS ARG ALA ALA LEU SEQRES 12 A 462 PRO SER HIS VAL VAL THR MET LEU ASP ASN PHE PRO THR SEQRES 13 A 462 ASN LEU HIS PRO MET SER GLN LEU SER ALA ALA VAL THR SEQRES 14 A 462 ALA LEU ASN SER GLU SER ASN PHE ALA ARG ALA TYR ALA SEQRES 15 A 462 GLN GLY ILE SER ARG THR LYS TYR TRP GLU LEU ILE TYR SEQRES 16 A 462 GLU ASP SER MET ASP LEU ILE ALA LYS LEU PRO CME VAL SEQRES 17 A 462 ALA ALA LYS ILE TYR ARG ASN LEU TYR ARG GLU GLY SER SEQRES 18 A 462 GLY ILE GLY ALA ILE ASP SER ASN LEU ASP TRP SER HIS SEQRES 19 A 462 ASN PHE THR ASN MET LEU GLY TYR THR ASP HIS GLN PHE SEQRES 20 A 462 THR GLU LEU THR ARG LEU TYR LEU THR ILE HIS SER ASP SEQRES 21 A 462 HIS GLU GLY GLY ASN VAL SER ALA HIS THR SER HIS LEU SEQRES 22 A 462 VAL GLY SER ALA LEU SER ASP PRO TYR LEU SER PHE ALA SEQRES 23 A 462 ALA ALA MET ASN GLY LEU ALA GLY PRO LEU HIS GLY LEU SEQRES 24 A 462 ALA ASN GLN GLU VAL LEU VAL TRP LEU THR GLN LEU GLN SEQRES 25 A 462 LYS GLU VAL GLY LYS ASP VAL SER ASP GLU LYS LEU ARG SEQRES 26 A 462 ASP TYR ILE TRP ASN THR LEU ASN SER GLY ARG VAL VAL SEQRES 27 A 462 PRO GLY TYR GLY HIS ALA VAL LEU ARG LYS THR ASP PRO SEQRES 28 A 462 ARG TYR THR CME GLN ARG GLU PHE ALA LEU LYS HIS LEU SEQRES 29 A 462 PRO ASN ASP PRO MET PHE LYS LEU VAL ALA GLN LEU TYR SEQRES 30 A 462 LYS ILE VAL PRO ASN VAL LEU LEU GLU GLN GLY LYS ALA SEQRES 31 A 462 LYS ASN PRO TRP PRO ASN VAL ASP ALA HIS SER GLY VAL SEQRES 32 A 462 LEU LEU GLN TYR TYR GLY MET THR GLU MET ASN TYR TYR SEQRES 33 A 462 THR VAL LEU PHE GLY VAL SER ARG ALA LEU GLY VAL LEU SEQRES 34 A 462 ALA GLN LEU ILE TRP SER ARG ALA LEU GLY PHE PRO LEU SEQRES 35 A 462 GLU ARG PRO LYS SER MET SER THR GLU GLY LEU MET LYS SEQRES 36 A 462 PHE VAL ASP SER LYS SER GLY MODRES 5UZQ CME A 211 CYS MODIFIED RESIDUE MODRES 5UZQ CME A 359 CYS MODIFIED RESIDUE HET CME A 211 10 HET CME A 359 10 HETNAM CME S,S-(2-HYDROXYETHYL)THIOCYSTEINE FORMUL 1 CME 2(C5 H11 N O3 S2) FORMUL 2 HOH *159(H2 O) HELIX 1 AA1 ASN A 32 GLY A 56 1 25 HELIX 2 AA2 THR A 64 GLY A 70 1 7 HELIX 3 AA3 ILE A 98 LEU A 105 1 8 HELIX 4 AA4 LEU A 115 GLY A 126 1 12 HELIX 5 AA5 THR A 130 ALA A 145 1 16 HELIX 6 AA6 PRO A 148 PHE A 158 1 11 HELIX 7 AA7 HIS A 163 LEU A 175 1 13 HELIX 8 AA8 ASN A 176 GLU A 178 5 3 HELIX 9 AA9 SER A 179 GLY A 188 1 10 HELIX 10 AB1 SER A 190 THR A 192 5 3 HELIX 11 AB2 LYS A 193 ARG A 222 1 30 HELIX 12 AB3 ASP A 235 GLY A 245 1 11 HELIX 13 AB4 ASP A 248 HIS A 262 1 15 HELIX 14 AB5 ASN A 269 SER A 280 1 12 HELIX 15 AB6 ASP A 284 ALA A 297 1 14 HELIX 16 AB7 GLY A 298 LEU A 303 1 6 HELIX 17 AB8 LEU A 303 GLY A 320 1 18 HELIX 18 AB9 SER A 324 SER A 338 1 15 HELIX 19 AC1 ASP A 354 LEU A 368 1 15 HELIX 20 AC2 ASP A 371 GLY A 392 1 22 HELIX 21 AC3 VAL A 401 ALA A 403 5 3 HELIX 22 AC4 HIS A 404 TYR A 412 1 9 HELIX 23 AC5 GLU A 416 ASN A 418 5 3 HELIX 24 AC6 TYR A 419 LEU A 442 1 24 HELIX 25 AC7 SER A 453 SER A 463 1 11 SHEET 1 AA1 3 SER A 83 ASP A 86 0 SHEET 2 AA1 3 GLY A 90 PHE A 93 -1 O ARG A 92 N VAL A 84 SHEET 3 AA1 3 PHE A 96 SER A 97 -1 O PHE A 96 N PHE A 93 SHEET 1 AA2 2 TYR A 345 HIS A 347 0 SHEET 2 AA2 2 ASN A 396 PRO A 399 -1 O TRP A 398 N GLY A 346 LINK C PRO A 210 N CME A 211 1555 1555 1.34 LINK C CME A 211 N VAL A 212 1555 1555 1.33 LINK C THR A 358 N CME A 359 1555 1555 1.34 LINK C CME A 359 N GLN A 360 1555 1555 1.33 CRYST1 76.760 76.760 198.764 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013028 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013028 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005031 0.00000