HEADER UNKNOWN FUNCTION 27-FEB-17 5V00 TITLE STRUCTURE OF HUTD FROM PSEUDOMONAS FLUORESCENS SBW25 (FORMATE TITLE 2 CONDITION) COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS (STRAIN SBW25); SOURCE 3 ORGANISM_TAXID: 216595; SOURCE 4 STRAIN: SBW25; SOURCE 5 GENE: PFLU_0360; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BICUPIN, HISTIDINE DEGRADATION, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,J.M.JOHNSTON,M.L.GERTH,E.N.BAKER,J.S.LOTT,P.B.RAINEY REVDAT 5 04-OCT-23 5V00 1 REMARK REVDAT 4 01-JAN-20 5V00 1 REMARK REVDAT 3 02-AUG-17 5V00 1 JRNL REVDAT 2 19-APR-17 5V00 1 JRNL REVDAT 1 15-MAR-17 5V00 0 SPRSDE 15-MAR-17 5V00 3ESG JRNL AUTH M.L.GERTH,Y.LIU,W.JIAO,X.X.ZHANG,E.N.BAKER,J.S.LOTT, JRNL AUTH 2 P.B.RAINEY,J.M.JOHNSTON JRNL TITL CRYSTAL STRUCTURE OF A BICUPIN PROTEIN HUTD INVOLVED IN JRNL TITL 2 HISTIDINE UTILIZATION IN PSEUDOMONAS. JRNL REF PROTEINS V. 85 1580 2017 JRNL REFN ESSN 1097-0134 JRNL PMID 28383128 JRNL DOI 10.1002/PROT.25303 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 54479 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2911 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3817 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.25 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 217 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2835 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 402 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.087 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.089 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.054 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.705 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2990 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2751 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4040 ; 2.001 ; 1.950 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6337 ; 1.086 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 385 ; 6.776 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 143 ;34.976 ;22.867 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 483 ;12.525 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 31 ;15.896 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 441 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3436 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 683 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5V00 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-FEB-17. REMARK 100 THE DEPOSITION ID IS D_1000226698. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-08 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57596 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.790 REMARK 200 RESOLUTION RANGE LOW (A) : 74.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.79 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.29000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1YLL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.08 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM FORMATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 87.20950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.43150 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.43150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.60475 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.43150 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.43150 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 130.81425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.43150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.43150 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.60475 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.43150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.43150 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 130.81425 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 87.20950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER BY SIZE EXCLUSION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 41.43150 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 41.43150 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 43.60475 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 GLY A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 SER A 2 REMARK 465 MET B -6 REMARK 465 GLY B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 HIS B 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU B 35 CG CD1 CD2 REMARK 470 GLU B 36 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 398 O HOH A 501 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 181 CD GLU B 181 OE2 -0.088 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 94 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP A 170 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 GLU A 181 OE1 - CD - OE2 ANGL. DEV. = 8.4 DEGREES REMARK 500 ARG A 185 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG B 41 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ARG B 81 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ARG B 121 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP B 126 CB - CG - OD1 ANGL. DEV. = 5.8 DEGREES REMARK 500 ASP B 126 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG B 130 NE - CZ - NH1 ANGL. DEV. = -3.1 DEGREES REMARK 500 ASP B 170 CB - CG - OD1 ANGL. DEV. = 8.1 DEGREES REMARK 500 ASP B 170 CB - CG - OD2 ANGL. DEV. = -6.5 DEGREES REMARK 500 ARG B 176 NE - CZ - NH1 ANGL. DEV. = 5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 27 -62.95 -97.49 REMARK 500 ASP A 76 -132.63 55.51 REMARK 500 ILE B 27 -60.87 -98.47 REMARK 500 GLU B 36 27.48 -74.18 REMARK 500 GLU B 78 176.10 -59.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT A 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 206 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5FCC RELATED DB: PDB REMARK 900 5FCC IS A STRUCTURE OF THE SAME PROTEIN BUT IN A DIFFERENT REMARK 900 CRYSTALLIZATION CONDITION WITH DIFFERENT SMALL MOLECULES BOUND DBREF 5V00 A 2 186 UNP C3K802 C3K802_PSEFS 2 186 DBREF 5V00 B 2 186 UNP C3K802 C3K802_PSEFS 2 186 SEQADV 5V00 MET A -6 UNP C3K802 INITIATING METHIONINE SEQADV 5V00 GLY A -5 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A -4 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A -3 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A -2 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A -1 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A 0 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS A 1 UNP C3K802 EXPRESSION TAG SEQADV 5V00 MET B -6 UNP C3K802 INITIATING METHIONINE SEQADV 5V00 GLY B -5 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B -4 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B -3 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B -2 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B -1 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B 0 UNP C3K802 EXPRESSION TAG SEQADV 5V00 HIS B 1 UNP C3K802 EXPRESSION TAG SEQRES 1 A 193 MET GLY HIS HIS HIS HIS HIS HIS SER ALA ILE SER VAL SEQRES 2 A 193 TRP ARG ALA VAL ASP TYR VAL ARG MET PRO TRP LYS ASN SEQRES 3 A 193 GLY GLY GLY SER THR GLU GLU ILE THR ARG ASP ALA GLY SEQRES 4 A 193 THR GLY LEU GLU GLY PHE GLY TRP ARG LEU SER ILE ALA SEQRES 5 A 193 ASP ILE GLY GLU SER GLY GLY PHE SER SER PHE ALA GLY SEQRES 6 A 193 TYR GLN ARG VAL ILE THR VAL ILE GLN GLY ALA GLY MET SEQRES 7 A 193 VAL LEU THR VAL ASP GLY GLU GLU GLN ARG GLY LEU LEU SEQRES 8 A 193 PRO LEU GLN PRO PHE ALA PHE ARG GLY ASP SER GLN VAL SEQRES 9 A 193 SER CYS ARG LEU ILE THR GLY PRO ILE ARG ASP PHE ASN SEQRES 10 A 193 LEU ILE TYR SER PRO GLU ARG TYR HIS ALA ARG LEU GLN SEQRES 11 A 193 TRP VAL ASP GLY VAL GLN ARG PHE PHE SER THR ALA GLN SEQRES 12 A 193 THR VAL LEU VAL PHE SER VAL ALA ASP GLU VAL LYS VAL SEQRES 13 A 193 LEU GLY GLU LYS LEU GLY HIS HIS ASP CYS LEU GLN VAL SEQRES 14 A 193 ASP GLY ASN ALA GLY LEU LEU ASP ILE SER VAL THR GLY SEQRES 15 A 193 ARG CYS CYS LEU ILE GLU LEU THR GLN ARG GLY SEQRES 1 B 193 MET GLY HIS HIS HIS HIS HIS HIS SER ALA ILE SER VAL SEQRES 2 B 193 TRP ARG ALA VAL ASP TYR VAL ARG MET PRO TRP LYS ASN SEQRES 3 B 193 GLY GLY GLY SER THR GLU GLU ILE THR ARG ASP ALA GLY SEQRES 4 B 193 THR GLY LEU GLU GLY PHE GLY TRP ARG LEU SER ILE ALA SEQRES 5 B 193 ASP ILE GLY GLU SER GLY GLY PHE SER SER PHE ALA GLY SEQRES 6 B 193 TYR GLN ARG VAL ILE THR VAL ILE GLN GLY ALA GLY MET SEQRES 7 B 193 VAL LEU THR VAL ASP GLY GLU GLU GLN ARG GLY LEU LEU SEQRES 8 B 193 PRO LEU GLN PRO PHE ALA PHE ARG GLY ASP SER GLN VAL SEQRES 9 B 193 SER CYS ARG LEU ILE THR GLY PRO ILE ARG ASP PHE ASN SEQRES 10 B 193 LEU ILE TYR SER PRO GLU ARG TYR HIS ALA ARG LEU GLN SEQRES 11 B 193 TRP VAL ASP GLY VAL GLN ARG PHE PHE SER THR ALA GLN SEQRES 12 B 193 THR VAL LEU VAL PHE SER VAL ALA ASP GLU VAL LYS VAL SEQRES 13 B 193 LEU GLY GLU LYS LEU GLY HIS HIS ASP CYS LEU GLN VAL SEQRES 14 B 193 ASP GLY ASN ALA GLY LEU LEU ASP ILE SER VAL THR GLY SEQRES 15 B 193 ARG CYS CYS LEU ILE GLU LEU THR GLN ARG GLY HET GOL A 201 6 HET FMT A 202 3 HET FMT A 203 3 HET FMT A 204 3 HET FMT A 205 3 HET FMT A 206 3 HET FMT B 201 3 HET FMT B 202 3 HET FMT B 203 3 HET FMT B 204 3 HET FMT B 205 3 HET GOL B 206 6 HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 FMT 10(C H2 O2) FORMUL 15 HOH *402(H2 O) HELIX 1 AA1 ARG A 8 TYR A 12 5 5 HELIX 2 AA2 ARG B 8 TYR B 12 5 5 SHEET 1 AA1 9 ILE A 4 TRP A 7 0 SHEET 2 AA1 9 CYS A 159 VAL A 162 -1 O CYS A 159 N TRP A 7 SHEET 3 AA1 9 THR A 137 SER A 142 -1 N VAL A 138 O VAL A 162 SHEET 4 AA1 9 CYS A 177 GLN A 184 -1 O ILE A 180 N LEU A 139 SHEET 5 AA1 9 TYR A 118 VAL A 125 -1 N GLN A 123 O LEU A 179 SHEET 6 AA1 9 VAL B 128 SER B 133 -1 O PHE B 132 N LEU A 122 SHEET 7 AA1 9 LEU B 169 THR B 174 -1 O LEU B 169 N SER B 133 SHEET 8 AA1 9 VAL B 147 VAL B 149 -1 N LYS B 148 O THR B 174 SHEET 9 AA1 9 GLU B 152 LEU B 154 -1 O LEU B 154 N VAL B 147 SHEET 1 AA2 6 VAL A 13 PRO A 16 0 SHEET 2 AA2 6 GLY A 22 ARG A 29 -1 O GLU A 26 N VAL A 13 SHEET 3 AA2 6 TRP A 40 ILE A 47 -1 O ASP A 46 N SER A 23 SHEET 4 AA2 6 ILE A 106 TYR A 113 -1 O ILE A 106 N ILE A 47 SHEET 5 AA2 6 GLN A 60 GLN A 67 -1 N GLN A 60 O TYR A 113 SHEET 6 AA2 6 PHE A 89 ARG A 92 -1 O PHE A 89 N ILE A 63 SHEET 1 AA3 4 GLY A 51 GLY A 52 0 SHEET 2 AA3 4 VAL A 97 LEU A 101 -1 O CYS A 99 N GLY A 51 SHEET 3 AA3 4 MET A 71 VAL A 75 -1 N VAL A 72 O ARG A 100 SHEET 4 AA3 4 ARG A 81 LEU A 83 -1 O ARG A 81 N LEU A 73 SHEET 1 AA4 9 GLU A 152 LEU A 154 0 SHEET 2 AA4 9 VAL A 147 VAL A 149 -1 N VAL A 147 O LEU A 154 SHEET 3 AA4 9 LEU A 169 THR A 174 -1 O THR A 174 N LYS A 148 SHEET 4 AA4 9 VAL A 128 SER A 133 -1 N PHE A 131 O ILE A 171 SHEET 5 AA4 9 TYR B 118 VAL B 125 -1 O LEU B 122 N PHE A 132 SHEET 6 AA4 9 CYS B 177 GLN B 184 -1 O THR B 183 N HIS B 119 SHEET 7 AA4 9 THR B 137 SER B 142 -1 N LEU B 139 O ILE B 180 SHEET 8 AA4 9 CYS B 159 ASP B 163 -1 O VAL B 162 N VAL B 138 SHEET 9 AA4 9 ALA B 3 TRP B 7 -1 N TRP B 7 O CYS B 159 SHEET 1 AA5 6 ARG B 14 PRO B 16 0 SHEET 2 AA5 6 GLY B 22 ARG B 29 -1 O THR B 24 N MET B 15 SHEET 3 AA5 6 TRP B 40 ILE B 47 -1 O ASP B 46 N SER B 23 SHEET 4 AA5 6 ILE B 106 TYR B 113 -1 O ILE B 106 N ILE B 47 SHEET 5 AA5 6 GLN B 60 GLN B 67 -1 N GLN B 60 O TYR B 113 SHEET 6 AA5 6 PHE B 89 ARG B 92 -1 O PHE B 89 N ILE B 63 SHEET 1 AA6 4 GLY B 51 GLY B 52 0 SHEET 2 AA6 4 VAL B 97 LEU B 101 -1 O CYS B 99 N GLY B 51 SHEET 3 AA6 4 MET B 71 VAL B 75 -1 N VAL B 72 O ARG B 100 SHEET 4 AA6 4 ARG B 81 LEU B 83 -1 O LEU B 83 N MET B 71 SITE 1 AC1 9 ASN A 19 GLY A 52 PHE A 53 SER A 54 SITE 2 AC1 9 FMT A 202 FMT A 205 HOH A 326 HOH A 357 SITE 3 AC1 9 HOH A 457 SITE 1 AC2 6 PHE A 53 ARG A 61 ASN A 110 GOL A 201 SITE 2 AC2 6 HOH A 328 HOH A 401 SITE 1 AC3 8 ARG A 61 ASN A 110 ILE A 112 HOH A 333 SITE 2 AC3 8 HOH A 338 HOH A 359 HOH A 385 HOH A 401 SITE 1 AC4 4 PRO A 16 HOH A 314 ARG B 29 ARG B 41 SITE 1 AC5 5 TRP A 17 LYS A 18 GOL A 201 HOH A 337 SITE 2 AC5 5 HOH A 357 SITE 1 AC6 5 LYS A 148 SER A 172 VAL A 173 THR A 174 SITE 2 AC6 5 HOH A 403 SITE 1 AC7 6 PHE B 53 ARG B 61 ASN B 110 GOL B 206 SITE 2 AC7 6 HOH B 324 HOH B 398 SITE 1 AC8 7 THR A 33 GLY A 34 LYS B 153 HOH B 301 SITE 2 AC8 7 HOH B 367 HOH B 387 HOH B 432 SITE 1 AC9 5 THR B 74 ASP B 76 GLY B 77 GLN B 96 SITE 2 AC9 5 SER B 98 SITE 1 AD1 6 LYS B 148 SER B 172 VAL B 173 THR B 174 SITE 2 AD1 6 HOH B 328 HOH B 446 SITE 1 AD2 9 ARG B 41 PHE B 56 ARG B 61 ASN B 110 SITE 2 AD2 9 ILE B 112 HOH B 321 HOH B 331 HOH B 351 SITE 3 AD2 9 HOH B 398 SITE 1 AD3 5 TRP B 17 ASN B 19 PHE B 53 SER B 54 SITE 2 AD3 5 FMT B 201 CRYST1 82.863 82.863 174.419 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012068 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012068 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005733 0.00000