data_5V1M # _entry.id 5V1M # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5V1M pdb_00005v1m 10.2210/pdb5v1m/pdb WWPDB D_1000226757 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5V1M _pdbx_database_status.recvd_initial_deposition_date 2017-03-02 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Montemayor, E.J.' 1 ? 'Didychuk, A.L.' 2 ? 'Butcher, S.E.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 497 _citation.page_last 497 _citation.title 'Usb1 controls U6 snRNP assembly through evolutionarily divergent cyclic phosphodiesterase activities.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-017-00484-w _citation.pdbx_database_id_PubMed 28887445 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Didychuk, A.L.' 1 ? primary 'Montemayor, E.J.' 2 ? primary 'Carrocci, T.J.' 3 ? primary 'DeLaitsch, A.T.' 4 ? primary 'Lucarelli, S.E.' 5 ? primary 'Westler, W.M.' 6 ? primary 'Brow, D.A.' 7 ? primary 'Hoskins, A.A.' 8 ? primary 'Butcher, S.E.' 9 0000-0001-6343-6643 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 107.04 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5V1M _cell.details ? _cell.formula_units_Z ? _cell.length_a 42.512 _cell.length_a_esd ? _cell.length_b 53.219 _cell.length_b_esd ? _cell.length_c 46.638 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V1M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'U6 snRNA phosphodiesterase' 22186.500 1 3.1.4.- ? 'UNP residues 79-205' ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 6 ? ? ? ? 4 non-polymer syn "URIDINE-5'-MONOPHOSPHATE" 324.181 1 ? ? ? ? 5 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name hUsb1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GAHMGNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFT ANQVKIYTNQEKTRTFIGLEVTSGHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIV DGFEDAEVLLRVHTEQVRCKSGNKFFSMPLK ; _entity_poly.pdbx_seq_one_letter_code_can ;GAHMGNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFT ANQVKIYTNQEKTRTFIGLEVTSGHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIV DGFEDAEVLLRVHTEQVRCKSGNKFFSMPLK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 ASN n 1 7 TRP n 1 8 ALA n 1 9 THR n 1 10 HIS n 1 11 VAL n 1 12 TYR n 1 13 VAL n 1 14 PRO n 1 15 TYR n 1 16 GLU n 1 17 ALA n 1 18 LYS n 1 19 GLU n 1 20 GLU n 1 21 PHE n 1 22 LEU n 1 23 ASP n 1 24 LEU n 1 25 LEU n 1 26 ASP n 1 27 VAL n 1 28 LEU n 1 29 LEU n 1 30 PRO n 1 31 HIS n 1 32 ALA n 1 33 GLN n 1 34 THR n 1 35 TYR n 1 36 VAL n 1 37 PRO n 1 38 ARG n 1 39 LEU n 1 40 VAL n 1 41 ARG n 1 42 MET n 1 43 LYS n 1 44 VAL n 1 45 PHE n 1 46 HIS n 1 47 LEU n 1 48 SER n 1 49 LEU n 1 50 SER n 1 51 GLN n 1 52 SER n 1 53 VAL n 1 54 VAL n 1 55 LEU n 1 56 ARG n 1 57 HIS n 1 58 HIS n 1 59 TRP n 1 60 ILE n 1 61 LEU n 1 62 PRO n 1 63 PHE n 1 64 VAL n 1 65 GLN n 1 66 ALA n 1 67 LEU n 1 68 LYS n 1 69 ALA n 1 70 ARG n 1 71 MET n 1 72 THR n 1 73 SER n 1 74 PHE n 1 75 HIS n 1 76 ARG n 1 77 PHE n 1 78 PHE n 1 79 PHE n 1 80 THR n 1 81 ALA n 1 82 ASN n 1 83 GLN n 1 84 VAL n 1 85 LYS n 1 86 ILE n 1 87 TYR n 1 88 THR n 1 89 ASN n 1 90 GLN n 1 91 GLU n 1 92 LYS n 1 93 THR n 1 94 ARG n 1 95 THR n 1 96 PHE n 1 97 ILE n 1 98 GLY n 1 99 LEU n 1 100 GLU n 1 101 VAL n 1 102 THR n 1 103 SER n 1 104 GLY n 1 105 HIS n 1 106 ALA n 1 107 GLN n 1 108 PHE n 1 109 LEU n 1 110 ASP n 1 111 LEU n 1 112 VAL n 1 113 SER n 1 114 GLU n 1 115 VAL n 1 116 ASP n 1 117 ARG n 1 118 VAL n 1 119 MET n 1 120 GLU n 1 121 GLU n 1 122 PHE n 1 123 ASN n 1 124 LEU n 1 125 THR n 1 126 THR n 1 127 PHE n 1 128 TYR n 1 129 GLN n 1 130 ASP n 1 131 PRO n 1 132 SER n 1 133 PHE n 1 134 HIS n 1 135 LEU n 1 136 SER n 1 137 LEU n 1 138 ALA n 1 139 TRP n 1 140 CYS n 1 141 VAL n 1 142 GLY n 1 143 ASP n 1 144 ALA n 1 145 ARG n 1 146 LEU n 1 147 GLN n 1 148 LEU n 1 149 GLU n 1 150 GLY n 1 151 GLN n 1 152 CYS n 1 153 LEU n 1 154 GLN n 1 155 GLU n 1 156 LEU n 1 157 GLN n 1 158 ALA n 1 159 ILE n 1 160 VAL n 1 161 ASP n 1 162 GLY n 1 163 PHE n 1 164 GLU n 1 165 ASP n 1 166 ALA n 1 167 GLU n 1 168 VAL n 1 169 LEU n 1 170 LEU n 1 171 ARG n 1 172 VAL n 1 173 HIS n 1 174 THR n 1 175 GLU n 1 176 GLN n 1 177 VAL n 1 178 ARG n 1 179 CYS n 1 180 LYS n 1 181 SER n 1 182 GLY n 1 183 ASN n 1 184 LYS n 1 185 PHE n 1 186 PHE n 1 187 SER n 1 188 MET n 1 189 PRO n 1 190 LEU n 1 191 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 191 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'USB1, C16orf57' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code USB1_HUMAN _struct_ref.pdbx_db_accession Q9BQ65 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GNWATHVYVPYEAKEEFLDLLDVLLPHAQTYVPRLVRMKVFHLSLSQSVVLRHHWILPFVQALKARMTSFHRFFFTANQV KIYTNQEKTRTFIGLEVTSGHAQFLDLVSEVDRVMEEFNLTTFYQDPSFHLSLAWCVGDARLQLEGQCLQELQAIVDGFE DAEVLLRVHTEQVRCKSGNKFFSMPLK ; _struct_ref.pdbx_align_begin 79 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5V1M _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9BQ65 _struct_ref_seq.db_align_beg 79 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 265 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 79 _struct_ref_seq.pdbx_auth_seq_align_end 265 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5V1M GLY A 1 ? UNP Q9BQ65 ? ? 'expression tag' 75 1 1 5V1M ALA A 2 ? UNP Q9BQ65 ? ? 'expression tag' 76 2 1 5V1M HIS A 3 ? UNP Q9BQ65 ? ? 'expression tag' 77 3 1 5V1M MET A 4 ? UNP Q9BQ65 ? ? 'expression tag' 78 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U5P non-polymer . "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5V1M _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.27 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;20% w/v PEG 20,000, 20% v/v glycerol, 100 mM bis-tris base, 50 mM HCl, and 10 mM disodium 5' UMP ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-06-10 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9795 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 24-ID-C _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5V1M _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.47 _reflns.d_resolution_low 44.59 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 65375 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.47 _reflns_shell.d_res_low 1.50 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1621 _reflns_shell.percent_possible_all 99.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 6.7 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.581 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5V1M _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.470 _refine.ls_d_res_low 44.590 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 65375 _refine.ls_number_reflns_R_free 3883 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.36 _refine.ls_percent_reflns_R_free 5.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1611 _refine.ls_R_factor_R_free 0.1944 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1590 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.90 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4H7W _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 22.53 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.18 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1509 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1723 _refine_hist.d_res_high 1.470 _refine_hist.d_res_low 44.590 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.020 ? 1674 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.860 ? 2277 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 16.756 ? 615 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.114 ? 251 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 ? 284 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.4699 1.4878 . . 132 2044 94.00 . . . 0.3574 . 0.2991 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.4878 1.5067 . . 141 2247 99.00 . . . 0.2999 . 0.2841 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5067 1.5265 . . 137 2189 99.00 . . . 0.3163 . 0.2790 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5265 1.5474 . . 136 2161 98.00 . . . 0.3420 . 0.2671 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5474 1.5695 . . 138 2216 97.00 . . . 0.2919 . 0.2638 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5695 1.5930 . . 134 2058 95.00 . . . 0.3251 . 0.2517 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.5930 1.6178 . . 142 2246 99.00 . . . 0.3009 . 0.2361 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6178 1.6444 . . 141 2209 100.00 . . . 0.2783 . 0.2341 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6444 1.6727 . . 140 2225 99.00 . . . 0.2647 . 0.2310 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6727 1.7031 . . 139 2251 100.00 . . . 0.2860 . 0.2204 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7031 1.7359 . . 139 2189 100.00 . . . 0.2377 . 0.2035 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7359 1.7713 . . 141 2260 99.00 . . . 0.2506 . 0.1932 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7713 1.8099 . . 140 2177 99.00 . . . 0.2116 . 0.1817 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8099 1.8520 . . 138 2260 100.00 . . . 0.2101 . 0.1708 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8520 1.8983 . . 141 2220 99.00 . . . 0.1849 . 0.1539 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8983 1.9496 . . 141 2224 99.00 . . . 0.1796 . 0.1524 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9496 2.0070 . . 138 2198 99.00 . . . 0.2125 . 0.1466 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0070 2.0717 . . 136 2179 98.00 . . . 0.1964 . 0.1408 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0717 2.1458 . . 138 2139 95.00 . . . 0.2149 . 0.1428 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1458 2.2317 . . 128 2084 93.00 . . . 0.1735 . 0.1334 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2317 2.3333 . . 141 2248 100.00 . . . 0.1550 . 0.1187 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3333 2.4563 . . 137 2192 100.00 . . . 0.1918 . 0.1326 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4563 2.6101 . . 143 2239 100.00 . . . 0.1730 . 0.1349 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6101 2.8117 . . 143 2231 100.00 . . . 0.1530 . 0.1307 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8117 3.0945 . . 143 2206 99.00 . . . 0.1447 . 0.1296 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0945 3.5422 . . 141 2225 99.00 . . . 0.1393 . 0.1262 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5422 4.4621 . . 138 2139 96.00 . . . 0.1582 . 0.1391 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4621 44.6104 . . 139 2234 100.00 . . . 0.2288 . 0.1868 . . . . . . . . . . # _struct.entry_id 5V1M _struct.title ;Structure of human Usb1 with uridine 5'-monophosphate ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5V1M _struct_keywords.text 'Usb1 RNA exonuclease U6, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 LYS A 18 ? THR A 34 ? LYS A 92 THR A 108 1 ? 17 HELX_P HELX_P2 AA2 TRP A 59 ? THR A 72 ? TRP A 133 THR A 146 1 ? 14 HELX_P HELX_P3 AA3 GLY A 104 ? PHE A 122 ? GLY A 178 PHE A 196 1 ? 19 HELX_P HELX_P4 AA4 ALA A 144 ? GLU A 149 ? ALA A 218 GLU A 223 1 ? 6 HELX_P HELX_P5 AA5 GLY A 150 ? GLY A 162 ? GLY A 224 GLY A 236 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 45 ? SER A 48 ? PHE A 119 SER A 122 AA1 2 ASN A 6 ? TYR A 15 ? ASN A 80 TYR A 89 AA1 3 VAL A 53 ? ARG A 56 ? VAL A 127 ARG A 130 AA2 1 PHE A 45 ? SER A 48 ? PHE A 119 SER A 122 AA2 2 ASN A 6 ? TYR A 15 ? ASN A 80 TYR A 89 AA2 3 GLN A 176 ? SER A 181 ? GLN A 250 SER A 255 AA2 4 LYS A 184 ? PRO A 189 ? LYS A 258 PRO A 263 AA3 1 VAL A 40 ? ARG A 41 ? VAL A 114 ARG A 115 AA3 2 HIS A 134 ? VAL A 141 ? HIS A 208 VAL A 215 AA3 3 ARG A 94 ? VAL A 101 ? ARG A 168 VAL A 175 AA3 4 ALA A 81 ? THR A 88 ? ALA A 155 THR A 162 AA4 1 PHE A 78 ? PHE A 79 ? PHE A 152 PHE A 153 AA4 2 VAL A 172 ? HIS A 173 ? VAL A 246 HIS A 247 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 47 ? O LEU A 121 N VAL A 13 ? N VAL A 87 AA1 2 3 N THR A 9 ? N THR A 83 O VAL A 53 ? O VAL A 127 AA2 1 2 O LEU A 47 ? O LEU A 121 N VAL A 13 ? N VAL A 87 AA2 2 3 N TYR A 12 ? N TYR A 86 O ARG A 178 ? O ARG A 252 AA2 3 4 N CYS A 179 ? N CYS A 253 O PHE A 186 ? O PHE A 260 AA3 1 2 N VAL A 40 ? N VAL A 114 O TRP A 139 ? O TRP A 213 AA3 2 3 O LEU A 137 ? O LEU A 211 N ILE A 97 ? N ILE A 171 AA3 3 4 O PHE A 96 ? O PHE A 170 N TYR A 87 ? N TYR A 161 AA4 1 2 N PHE A 79 ? N PHE A 153 O VAL A 172 ? O VAL A 246 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 301 ? 1 'binding site for residue CL A 301' AC2 Software A GOL 302 ? 1 'binding site for residue GOL A 302' AC3 Software A GOL 303 ? 4 'binding site for residue GOL A 303' AC4 Software A GOL 304 ? 4 'binding site for residue GOL A 304' AC5 Software A GOL 305 ? 4 'binding site for residue GOL A 305' AC6 Software A GOL 306 ? 4 'binding site for residue GOL A 306' AC7 Software A GOL 307 ? 4 'binding site for residue GOL A 307' AC8 Software A U5P 308 ? 14 'binding site for residue U5P A 308' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 ARG A 38 ? ARG A 112 . ? 1_555 ? 2 AC2 1 LYS A 68 ? LYS A 142 . ? 1_555 ? 3 AC3 4 HIS A 10 ? HIS A 84 . ? 1_555 ? 4 AC3 4 TYR A 12 ? TYR A 86 . ? 1_555 ? 5 AC3 4 VAL A 44 ? VAL A 118 . ? 1_555 ? 6 AC3 4 LYS A 180 ? LYS A 254 . ? 1_555 ? 7 AC4 4 ALA A 66 ? ALA A 140 . ? 1_555 ? 8 AC4 4 ARG A 70 ? ARG A 144 . ? 1_555 ? 9 AC4 4 GLU A 121 ? GLU A 195 . ? 1_555 ? 10 AC4 4 HOH J . ? HOH A 443 . ? 1_555 ? 11 AC5 4 GLN A 65 ? GLN A 139 . ? 1_555 ? 12 AC5 4 LYS A 68 ? LYS A 142 . ? 1_555 ? 13 AC5 4 ALA A 69 ? ALA A 143 . ? 1_555 ? 14 AC5 4 HOH J . ? HOH A 438 . ? 1_555 ? 15 AC6 4 ASN A 82 ? ASN A 156 . ? 1_555 ? 16 AC6 4 THR A 102 ? THR A 176 . ? 1_555 ? 17 AC6 4 HOH J . ? HOH A 402 . ? 1_555 ? 18 AC6 4 HOH J . ? HOH A 426 . ? 1_555 ? 19 AC7 4 GLU A 175 ? GLU A 249 . ? 1_555 ? 20 AC7 4 GLN A 176 ? GLN A 250 . ? 1_555 ? 21 AC7 4 HOH J . ? HOH A 405 . ? 1_555 ? 22 AC7 4 HOH J . ? HOH A 431 . ? 1_555 ? 23 AC8 14 HIS A 46 ? HIS A 120 . ? 1_555 ? 24 AC8 14 SER A 48 ? SER A 122 . ? 1_555 ? 25 AC8 14 ASN A 89 ? ASN A 163 . ? 1_555 ? 26 AC8 14 GLN A 90 ? GLN A 164 . ? 1_555 ? 27 AC8 14 TYR A 128 ? TYR A 202 . ? 1_555 ? 28 AC8 14 PRO A 131 ? PRO A 205 . ? 1_555 ? 29 AC8 14 SER A 132 ? SER A 206 . ? 1_555 ? 30 AC8 14 HIS A 134 ? HIS A 208 . ? 1_555 ? 31 AC8 14 SER A 136 ? SER A 210 . ? 1_555 ? 32 AC8 14 HOH J . ? HOH A 401 . ? 1_555 ? 33 AC8 14 HOH J . ? HOH A 410 . ? 1_555 ? 34 AC8 14 HOH J . ? HOH A 413 . ? 1_555 ? 35 AC8 14 HOH J . ? HOH A 436 . ? 1_555 ? 36 AC8 14 HOH J . ? HOH A 458 . ? 1_555 ? # _atom_sites.entry_id 5V1M _atom_sites.fract_transf_matrix[1][1] 0.023523 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007211 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018790 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022427 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 75 ? ? ? A . n A 1 2 ALA 2 76 ? ? ? A . n A 1 3 HIS 3 77 ? ? ? A . n A 1 4 MET 4 78 78 MET MET A . n A 1 5 GLY 5 79 79 GLY GLY A . n A 1 6 ASN 6 80 80 ASN ASN A . n A 1 7 TRP 7 81 81 TRP TRP A . n A 1 8 ALA 8 82 82 ALA ALA A . n A 1 9 THR 9 83 83 THR THR A . n A 1 10 HIS 10 84 84 HIS HIS A . n A 1 11 VAL 11 85 85 VAL VAL A . n A 1 12 TYR 12 86 86 TYR TYR A . n A 1 13 VAL 13 87 87 VAL VAL A . n A 1 14 PRO 14 88 88 PRO PRO A . n A 1 15 TYR 15 89 89 TYR TYR A . n A 1 16 GLU 16 90 90 GLU GLU A . n A 1 17 ALA 17 91 91 ALA ALA A . n A 1 18 LYS 18 92 92 LYS LYS A . n A 1 19 GLU 19 93 93 GLU GLU A . n A 1 20 GLU 20 94 94 GLU GLU A . n A 1 21 PHE 21 95 95 PHE PHE A . n A 1 22 LEU 22 96 96 LEU LEU A . n A 1 23 ASP 23 97 97 ASP ASP A . n A 1 24 LEU 24 98 98 LEU LEU A . n A 1 25 LEU 25 99 99 LEU LEU A . n A 1 26 ASP 26 100 100 ASP ASP A . n A 1 27 VAL 27 101 101 VAL VAL A . n A 1 28 LEU 28 102 102 LEU LEU A . n A 1 29 LEU 29 103 103 LEU LEU A . n A 1 30 PRO 30 104 104 PRO PRO A . n A 1 31 HIS 31 105 105 HIS HIS A . n A 1 32 ALA 32 106 106 ALA ALA A . n A 1 33 GLN 33 107 107 GLN GLN A . n A 1 34 THR 34 108 108 THR THR A . n A 1 35 TYR 35 109 109 TYR TYR A . n A 1 36 VAL 36 110 110 VAL VAL A . n A 1 37 PRO 37 111 111 PRO PRO A . n A 1 38 ARG 38 112 112 ARG ARG A . n A 1 39 LEU 39 113 113 LEU LEU A . n A 1 40 VAL 40 114 114 VAL VAL A . n A 1 41 ARG 41 115 115 ARG ARG A . n A 1 42 MET 42 116 116 MET MET A . n A 1 43 LYS 43 117 117 LYS LYS A . n A 1 44 VAL 44 118 118 VAL VAL A . n A 1 45 PHE 45 119 119 PHE PHE A . n A 1 46 HIS 46 120 120 HIS HIS A . n A 1 47 LEU 47 121 121 LEU LEU A . n A 1 48 SER 48 122 122 SER SER A . n A 1 49 LEU 49 123 123 LEU LEU A . n A 1 50 SER 50 124 124 SER SER A . n A 1 51 GLN 51 125 125 GLN GLN A . n A 1 52 SER 52 126 126 SER SER A . n A 1 53 VAL 53 127 127 VAL VAL A . n A 1 54 VAL 54 128 128 VAL VAL A . n A 1 55 LEU 55 129 129 LEU LEU A . n A 1 56 ARG 56 130 130 ARG ARG A . n A 1 57 HIS 57 131 131 HIS HIS A . n A 1 58 HIS 58 132 132 HIS HIS A . n A 1 59 TRP 59 133 133 TRP TRP A . n A 1 60 ILE 60 134 134 ILE ILE A . n A 1 61 LEU 61 135 135 LEU LEU A . n A 1 62 PRO 62 136 136 PRO PRO A . n A 1 63 PHE 63 137 137 PHE PHE A . n A 1 64 VAL 64 138 138 VAL VAL A . n A 1 65 GLN 65 139 139 GLN GLN A . n A 1 66 ALA 66 140 140 ALA ALA A . n A 1 67 LEU 67 141 141 LEU LEU A . n A 1 68 LYS 68 142 142 LYS LYS A . n A 1 69 ALA 69 143 143 ALA ALA A . n A 1 70 ARG 70 144 144 ARG ARG A . n A 1 71 MET 71 145 145 MET MET A . n A 1 72 THR 72 146 146 THR THR A . n A 1 73 SER 73 147 147 SER SER A . n A 1 74 PHE 74 148 148 PHE PHE A . n A 1 75 HIS 75 149 149 HIS HIS A . n A 1 76 ARG 76 150 150 ARG ARG A . n A 1 77 PHE 77 151 151 PHE PHE A . n A 1 78 PHE 78 152 152 PHE PHE A . n A 1 79 PHE 79 153 153 PHE PHE A . n A 1 80 THR 80 154 154 THR THR A . n A 1 81 ALA 81 155 155 ALA ALA A . n A 1 82 ASN 82 156 156 ASN ASN A . n A 1 83 GLN 83 157 157 GLN GLN A . n A 1 84 VAL 84 158 158 VAL VAL A . n A 1 85 LYS 85 159 159 LYS LYS A . n A 1 86 ILE 86 160 160 ILE ILE A . n A 1 87 TYR 87 161 161 TYR TYR A . n A 1 88 THR 88 162 162 THR THR A . n A 1 89 ASN 89 163 163 ASN ASN A . n A 1 90 GLN 90 164 164 GLN GLN A . n A 1 91 GLU 91 165 165 GLU GLU A . n A 1 92 LYS 92 166 166 LYS LYS A . n A 1 93 THR 93 167 167 THR THR A . n A 1 94 ARG 94 168 168 ARG ARG A . n A 1 95 THR 95 169 169 THR THR A . n A 1 96 PHE 96 170 170 PHE PHE A . n A 1 97 ILE 97 171 171 ILE ILE A . n A 1 98 GLY 98 172 172 GLY GLY A . n A 1 99 LEU 99 173 173 LEU LEU A . n A 1 100 GLU 100 174 174 GLU GLU A . n A 1 101 VAL 101 175 175 VAL VAL A . n A 1 102 THR 102 176 176 THR THR A . n A 1 103 SER 103 177 177 SER SER A . n A 1 104 GLY 104 178 178 GLY GLY A . n A 1 105 HIS 105 179 179 HIS HIS A . n A 1 106 ALA 106 180 180 ALA ALA A . n A 1 107 GLN 107 181 181 GLN GLN A . n A 1 108 PHE 108 182 182 PHE PHE A . n A 1 109 LEU 109 183 183 LEU LEU A . n A 1 110 ASP 110 184 184 ASP ASP A . n A 1 111 LEU 111 185 185 LEU LEU A . n A 1 112 VAL 112 186 186 VAL VAL A . n A 1 113 SER 113 187 187 SER SER A . n A 1 114 GLU 114 188 188 GLU GLU A . n A 1 115 VAL 115 189 189 VAL VAL A . n A 1 116 ASP 116 190 190 ASP ASP A . n A 1 117 ARG 117 191 191 ARG ARG A . n A 1 118 VAL 118 192 192 VAL VAL A . n A 1 119 MET 119 193 193 MET MET A . n A 1 120 GLU 120 194 194 GLU GLU A . n A 1 121 GLU 121 195 195 GLU GLU A . n A 1 122 PHE 122 196 196 PHE PHE A . n A 1 123 ASN 123 197 197 ASN ASN A . n A 1 124 LEU 124 198 198 LEU LEU A . n A 1 125 THR 125 199 199 THR THR A . n A 1 126 THR 126 200 200 THR THR A . n A 1 127 PHE 127 201 201 PHE PHE A . n A 1 128 TYR 128 202 202 TYR TYR A . n A 1 129 GLN 129 203 203 GLN GLN A . n A 1 130 ASP 130 204 204 ASP ASP A . n A 1 131 PRO 131 205 205 PRO PRO A . n A 1 132 SER 132 206 206 SER SER A . n A 1 133 PHE 133 207 207 PHE PHE A . n A 1 134 HIS 134 208 208 HIS HIS A . n A 1 135 LEU 135 209 209 LEU LEU A . n A 1 136 SER 136 210 210 SER SER A . n A 1 137 LEU 137 211 211 LEU LEU A . n A 1 138 ALA 138 212 212 ALA ALA A . n A 1 139 TRP 139 213 213 TRP TRP A . n A 1 140 CYS 140 214 214 CYS CYS A . n A 1 141 VAL 141 215 215 VAL VAL A . n A 1 142 GLY 142 216 216 GLY GLY A . n A 1 143 ASP 143 217 217 ASP ASP A . n A 1 144 ALA 144 218 218 ALA ALA A . n A 1 145 ARG 145 219 219 ARG ARG A . n A 1 146 LEU 146 220 220 LEU LEU A . n A 1 147 GLN 147 221 221 GLN GLN A . n A 1 148 LEU 148 222 222 LEU LEU A . n A 1 149 GLU 149 223 223 GLU GLU A . n A 1 150 GLY 150 224 224 GLY GLY A . n A 1 151 GLN 151 225 225 GLN GLN A . n A 1 152 CYS 152 226 226 CYS CYS A . n A 1 153 LEU 153 227 227 LEU LEU A . n A 1 154 GLN 154 228 228 GLN GLN A . n A 1 155 GLU 155 229 229 GLU GLU A . n A 1 156 LEU 156 230 230 LEU LEU A . n A 1 157 GLN 157 231 231 GLN GLN A . n A 1 158 ALA 158 232 232 ALA ALA A . n A 1 159 ILE 159 233 233 ILE ILE A . n A 1 160 VAL 160 234 234 VAL VAL A . n A 1 161 ASP 161 235 235 ASP ASP A . n A 1 162 GLY 162 236 236 GLY GLY A . n A 1 163 PHE 163 237 237 PHE PHE A . n A 1 164 GLU 164 238 ? ? ? A . n A 1 165 ASP 165 239 ? ? ? A . n A 1 166 ALA 166 240 ? ? ? A . n A 1 167 GLU 167 241 241 GLU GLU A . n A 1 168 VAL 168 242 242 VAL VAL A . n A 1 169 LEU 169 243 243 LEU LEU A . n A 1 170 LEU 170 244 244 LEU LEU A . n A 1 171 ARG 171 245 245 ARG ARG A . n A 1 172 VAL 172 246 246 VAL VAL A . n A 1 173 HIS 173 247 247 HIS HIS A . n A 1 174 THR 174 248 248 THR THR A . n A 1 175 GLU 175 249 249 GLU GLU A . n A 1 176 GLN 176 250 250 GLN GLN A . n A 1 177 VAL 177 251 251 VAL VAL A . n A 1 178 ARG 178 252 252 ARG ARG A . n A 1 179 CYS 179 253 253 CYS CYS A . n A 1 180 LYS 180 254 254 LYS LYS A . n A 1 181 SER 181 255 255 SER SER A . n A 1 182 GLY 182 256 256 GLY GLY A . n A 1 183 ASN 183 257 257 ASN ASN A . n A 1 184 LYS 184 258 258 LYS LYS A . n A 1 185 PHE 185 259 259 PHE PHE A . n A 1 186 PHE 186 260 260 PHE PHE A . n A 1 187 SER 187 261 261 SER SER A . n A 1 188 MET 188 262 262 MET MET A . n A 1 189 PRO 189 263 263 PRO PRO A . n A 1 190 LEU 190 264 264 LEU LEU A . n A 1 191 LYS 191 265 265 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 301 1 CL CL A . C 3 GOL 1 302 1 GOL GOL A . D 3 GOL 1 303 3 GOL GOL A . E 3 GOL 1 304 4 GOL GOL A . F 3 GOL 1 305 5 GOL GOL A . G 3 GOL 1 306 7 GOL GOL A . H 3 GOL 1 307 8 GOL GOL A . I 4 U5P 1 308 1 U5P U5P A . J 5 HOH 1 401 240 HOH HOH A . J 5 HOH 2 402 156 HOH HOH A . J 5 HOH 3 403 277 HOH HOH A . J 5 HOH 4 404 63 HOH HOH A . J 5 HOH 5 405 263 HOH HOH A . J 5 HOH 6 406 275 HOH HOH A . J 5 HOH 7 407 97 HOH HOH A . J 5 HOH 8 408 123 HOH HOH A . J 5 HOH 9 409 298 HOH HOH A . J 5 HOH 10 410 238 HOH HOH A . J 5 HOH 11 411 130 HOH HOH A . J 5 HOH 12 412 11 HOH HOH A . J 5 HOH 13 413 68 HOH HOH A . J 5 HOH 14 414 168 HOH HOH A . J 5 HOH 15 415 120 HOH HOH A . J 5 HOH 16 416 247 HOH HOH A . J 5 HOH 17 417 291 HOH HOH A . J 5 HOH 18 418 69 HOH HOH A . J 5 HOH 19 419 221 HOH HOH A . J 5 HOH 20 420 248 HOH HOH A . J 5 HOH 21 421 109 HOH HOH A . J 5 HOH 22 422 21 HOH HOH A . J 5 HOH 23 423 170 HOH HOH A . J 5 HOH 24 424 98 HOH HOH A . J 5 HOH 25 425 265 HOH HOH A . J 5 HOH 26 426 155 HOH HOH A . J 5 HOH 27 427 103 HOH HOH A . J 5 HOH 28 428 175 HOH HOH A . J 5 HOH 29 429 299 HOH HOH A . J 5 HOH 30 430 92 HOH HOH A . J 5 HOH 31 431 80 HOH HOH A . J 5 HOH 32 432 111 HOH HOH A . J 5 HOH 33 433 115 HOH HOH A . J 5 HOH 34 434 254 HOH HOH A . J 5 HOH 35 435 8 HOH HOH A . J 5 HOH 36 436 301 HOH HOH A . J 5 HOH 37 437 220 HOH HOH A . J 5 HOH 38 438 87 HOH HOH A . J 5 HOH 39 439 86 HOH HOH A . J 5 HOH 40 440 283 HOH HOH A . J 5 HOH 41 441 116 HOH HOH A . J 5 HOH 42 442 18 HOH HOH A . J 5 HOH 43 443 13 HOH HOH A . J 5 HOH 44 444 236 HOH HOH A . J 5 HOH 45 445 106 HOH HOH A . J 5 HOH 46 446 292 HOH HOH A . J 5 HOH 47 447 269 HOH HOH A . J 5 HOH 48 448 15 HOH HOH A . J 5 HOH 49 449 90 HOH HOH A . J 5 HOH 50 450 70 HOH HOH A . J 5 HOH 51 451 4 HOH HOH A . J 5 HOH 52 452 125 HOH HOH A . J 5 HOH 53 453 10 HOH HOH A . J 5 HOH 54 454 33 HOH HOH A . J 5 HOH 55 455 287 HOH HOH A . J 5 HOH 56 456 47 HOH HOH A . J 5 HOH 57 457 297 HOH HOH A . J 5 HOH 58 458 162 HOH HOH A . J 5 HOH 59 459 124 HOH HOH A . J 5 HOH 60 460 5 HOH HOH A . J 5 HOH 61 461 100 HOH HOH A . J 5 HOH 62 462 294 HOH HOH A . J 5 HOH 63 463 49 HOH HOH A . J 5 HOH 64 464 6 HOH HOH A . J 5 HOH 65 465 64 HOH HOH A . J 5 HOH 66 466 210 HOH HOH A . J 5 HOH 67 467 9 HOH HOH A . J 5 HOH 68 468 258 HOH HOH A . J 5 HOH 69 469 239 HOH HOH A . J 5 HOH 70 470 54 HOH HOH A . J 5 HOH 71 471 57 HOH HOH A . J 5 HOH 72 472 36 HOH HOH A . J 5 HOH 73 473 34 HOH HOH A . J 5 HOH 74 474 136 HOH HOH A . J 5 HOH 75 475 53 HOH HOH A . J 5 HOH 76 476 151 HOH HOH A . J 5 HOH 77 477 60 HOH HOH A . J 5 HOH 78 478 78 HOH HOH A . J 5 HOH 79 479 35 HOH HOH A . J 5 HOH 80 480 32 HOH HOH A . J 5 HOH 81 481 129 HOH HOH A . J 5 HOH 82 482 72 HOH HOH A . J 5 HOH 83 483 62 HOH HOH A . J 5 HOH 84 484 88 HOH HOH A . J 5 HOH 85 485 66 HOH HOH A . J 5 HOH 86 486 82 HOH HOH A . J 5 HOH 87 487 44 HOH HOH A . J 5 HOH 88 488 276 HOH HOH A . J 5 HOH 89 489 171 HOH HOH A . J 5 HOH 90 490 56 HOH HOH A . J 5 HOH 91 491 30 HOH HOH A . J 5 HOH 92 492 14 HOH HOH A . J 5 HOH 93 493 250 HOH HOH A . J 5 HOH 94 494 244 HOH HOH A . J 5 HOH 95 495 110 HOH HOH A . J 5 HOH 96 496 295 HOH HOH A . J 5 HOH 97 497 161 HOH HOH A . J 5 HOH 98 498 38 HOH HOH A . J 5 HOH 99 499 302 HOH HOH A . J 5 HOH 100 500 81 HOH HOH A . J 5 HOH 101 501 160 HOH HOH A . J 5 HOH 102 502 288 HOH HOH A . J 5 HOH 103 503 131 HOH HOH A . J 5 HOH 104 504 256 HOH HOH A . J 5 HOH 105 505 146 HOH HOH A . J 5 HOH 106 506 158 HOH HOH A . J 5 HOH 107 507 284 HOH HOH A . J 5 HOH 108 508 79 HOH HOH A . J 5 HOH 109 509 253 HOH HOH A . J 5 HOH 110 510 52 HOH HOH A . J 5 HOH 111 511 260 HOH HOH A . J 5 HOH 112 512 274 HOH HOH A . J 5 HOH 113 513 303 HOH HOH A . J 5 HOH 114 514 165 HOH HOH A . J 5 HOH 115 515 22 HOH HOH A . J 5 HOH 116 516 252 HOH HOH A . J 5 HOH 117 517 282 HOH HOH A . J 5 HOH 118 518 122 HOH HOH A . J 5 HOH 119 519 50 HOH HOH A . J 5 HOH 120 520 93 HOH HOH A . J 5 HOH 121 521 237 HOH HOH A . J 5 HOH 122 522 285 HOH HOH A . J 5 HOH 123 523 296 HOH HOH A . J 5 HOH 124 524 191 HOH HOH A . J 5 HOH 125 525 83 HOH HOH A . J 5 HOH 126 526 112 HOH HOH A . J 5 HOH 127 527 145 HOH HOH A . J 5 HOH 128 528 150 HOH HOH A . J 5 HOH 129 529 300 HOH HOH A . J 5 HOH 130 530 242 HOH HOH A . J 5 HOH 131 531 272 HOH HOH A . J 5 HOH 132 532 232 HOH HOH A . J 5 HOH 133 533 193 HOH HOH A . J 5 HOH 134 534 172 HOH HOH A . J 5 HOH 135 535 159 HOH HOH A . J 5 HOH 136 536 264 HOH HOH A . J 5 HOH 137 537 147 HOH HOH A . J 5 HOH 138 538 249 HOH HOH A . J 5 HOH 139 539 211 HOH HOH A . J 5 HOH 140 540 197 HOH HOH A . J 5 HOH 141 541 1 HOH HOH A . J 5 HOH 142 542 219 HOH HOH A . J 5 HOH 143 543 279 HOH HOH A . J 5 HOH 144 544 266 HOH HOH A . J 5 HOH 145 545 141 HOH HOH A . J 5 HOH 146 546 243 HOH HOH A . J 5 HOH 147 547 126 HOH HOH A . J 5 HOH 148 548 117 HOH HOH A . J 5 HOH 149 549 290 HOH HOH A . J 5 HOH 150 550 75 HOH HOH A . J 5 HOH 151 551 289 HOH HOH A . J 5 HOH 152 552 67 HOH HOH A . J 5 HOH 153 553 233 HOH HOH A . J 5 HOH 154 554 118 HOH HOH A . J 5 HOH 155 555 142 HOH HOH A . J 5 HOH 156 556 190 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-08-16 2 'Structure model' 1 1 2017-09-13 3 'Structure model' 1 2 2019-02-27 4 'Structure model' 1 3 2020-01-01 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Author supporting evidence' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_citation.country' 3 3 'Structure model' '_citation.journal_abbrev' 4 3 'Structure model' '_citation.journal_id_CSD' 5 3 'Structure model' '_citation.journal_id_ISSN' 6 3 'Structure model' '_citation.journal_volume' 7 3 'Structure model' '_citation.page_first' 8 3 'Structure model' '_citation.page_last' 9 3 'Structure model' '_citation.pdbx_database_id_DOI' 10 3 'Structure model' '_citation.pdbx_database_id_PubMed' 11 3 'Structure model' '_citation.title' 12 3 'Structure model' '_citation.year' 13 4 'Structure model' '_pdbx_audit_support.funding_organization' 14 5 'Structure model' '_database_2.pdbx_DOI' 15 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A LYS 117 ? ? O A HOH 408 ? ? 1.57 2 1 HH21 A ARG 115 ? ? O A HOH 407 ? ? 1.58 3 1 O A HOH 496 ? ? O A HOH 523 ? ? 2.02 4 1 O1P A U5P 308 ? ? O A HOH 401 ? ? 2.02 5 1 OG A SER 177 ? B O A HOH 402 ? ? 2.11 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CB _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 VAL _pdbx_validate_rmsd_bond.auth_seq_id_1 128 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CG1 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 VAL _pdbx_validate_rmsd_bond.auth_seq_id_2 128 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.355 _pdbx_validate_rmsd_bond.bond_target_value 1.524 _pdbx_validate_rmsd_bond.bond_deviation -0.169 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.021 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 176 ? ? -106.44 -98.78 2 1 THR A 176 ? ? -106.44 -97.43 3 1 VAL A 242 ? ? 58.45 -49.22 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 117 ? CG ? A LYS 43 CG 2 1 Y 1 A LYS 117 ? CD ? A LYS 43 CD 3 1 Y 1 A LYS 117 ? CE ? A LYS 43 CE 4 1 Y 1 A LYS 117 ? NZ ? A LYS 43 NZ 5 1 Y 1 A GLN 203 ? CG ? A GLN 129 CG 6 1 Y 1 A GLN 203 ? CD ? A GLN 129 CD 7 1 Y 1 A GLN 203 ? OE1 ? A GLN 129 OE1 8 1 Y 1 A GLN 203 ? NE2 ? A GLN 129 NE2 9 1 Y 1 A LEU 220 ? CG ? A LEU 146 CG 10 1 Y 1 A LEU 220 ? CD1 ? A LEU 146 CD1 11 1 Y 1 A LEU 220 ? CD2 ? A LEU 146 CD2 12 1 Y 1 A GLU 241 ? CG ? A GLU 167 CG 13 1 Y 1 A GLU 241 ? CD ? A GLU 167 CD 14 1 Y 1 A GLU 241 ? OE1 ? A GLU 167 OE1 15 1 Y 1 A GLU 241 ? OE2 ? A GLU 167 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 75 ? A GLY 1 2 1 Y 1 A ALA 76 ? A ALA 2 3 1 Y 1 A HIS 77 ? A HIS 3 4 1 Y 1 A GLU 238 ? A GLU 164 5 1 Y 1 A ASP 239 ? A ASP 165 6 1 Y 1 A ALA 240 ? A ALA 166 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 GOL C1 C N N 138 GOL O1 O N N 139 GOL C2 C N N 140 GOL O2 O N N 141 GOL C3 C N N 142 GOL O3 O N N 143 GOL H11 H N N 144 GOL H12 H N N 145 GOL HO1 H N N 146 GOL H2 H N N 147 GOL HO2 H N N 148 GOL H31 H N N 149 GOL H32 H N N 150 GOL HO3 H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 THR N N N N 319 THR CA C N S 320 THR C C N N 321 THR O O N N 322 THR CB C N R 323 THR OG1 O N N 324 THR CG2 C N N 325 THR OXT O N N 326 THR H H N N 327 THR H2 H N N 328 THR HA H N N 329 THR HB H N N 330 THR HG1 H N N 331 THR HG21 H N N 332 THR HG22 H N N 333 THR HG23 H N N 334 THR HXT H N N 335 TRP N N N N 336 TRP CA C N S 337 TRP C C N N 338 TRP O O N N 339 TRP CB C N N 340 TRP CG C Y N 341 TRP CD1 C Y N 342 TRP CD2 C Y N 343 TRP NE1 N Y N 344 TRP CE2 C Y N 345 TRP CE3 C Y N 346 TRP CZ2 C Y N 347 TRP CZ3 C Y N 348 TRP CH2 C Y N 349 TRP OXT O N N 350 TRP H H N N 351 TRP H2 H N N 352 TRP HA H N N 353 TRP HB2 H N N 354 TRP HB3 H N N 355 TRP HD1 H N N 356 TRP HE1 H N N 357 TRP HE3 H N N 358 TRP HZ2 H N N 359 TRP HZ3 H N N 360 TRP HH2 H N N 361 TRP HXT H N N 362 TYR N N N N 363 TYR CA C N S 364 TYR C C N N 365 TYR O O N N 366 TYR CB C N N 367 TYR CG C Y N 368 TYR CD1 C Y N 369 TYR CD2 C Y N 370 TYR CE1 C Y N 371 TYR CE2 C Y N 372 TYR CZ C Y N 373 TYR OH O N N 374 TYR OXT O N N 375 TYR H H N N 376 TYR H2 H N N 377 TYR HA H N N 378 TYR HB2 H N N 379 TYR HB3 H N N 380 TYR HD1 H N N 381 TYR HD2 H N N 382 TYR HE1 H N N 383 TYR HE2 H N N 384 TYR HH H N N 385 TYR HXT H N N 386 U5P N1 N N N 387 U5P C2 C N N 388 U5P N3 N N N 389 U5P C4 C N N 390 U5P C5 C N N 391 U5P C6 C N N 392 U5P O2 O N N 393 U5P O4 O N N 394 U5P "C1'" C N R 395 U5P "C2'" C N R 396 U5P "O2'" O N N 397 U5P "C3'" C N S 398 U5P "C4'" C N R 399 U5P "O3'" O N N 400 U5P "O4'" O N N 401 U5P "C5'" C N N 402 U5P "O5'" O N N 403 U5P P P N N 404 U5P O1P O N N 405 U5P O2P O N N 406 U5P O3P O N N 407 U5P HN3 H N N 408 U5P H5 H N N 409 U5P H6 H N N 410 U5P "H1'" H N N 411 U5P "H2'" H N N 412 U5P "HO2'" H N N 413 U5P "H3'" H N N 414 U5P "H4'" H N N 415 U5P "HO3'" H N N 416 U5P "H5'1" H N N 417 U5P "H5'2" H N N 418 U5P HOP2 H N N 419 U5P HOP3 H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GOL C1 O1 sing N N 129 GOL C1 C2 sing N N 130 GOL C1 H11 sing N N 131 GOL C1 H12 sing N N 132 GOL O1 HO1 sing N N 133 GOL C2 O2 sing N N 134 GOL C2 C3 sing N N 135 GOL C2 H2 sing N N 136 GOL O2 HO2 sing N N 137 GOL C3 O3 sing N N 138 GOL C3 H31 sing N N 139 GOL C3 H32 sing N N 140 GOL O3 HO3 sing N N 141 HIS N CA sing N N 142 HIS N H sing N N 143 HIS N H2 sing N N 144 HIS CA C sing N N 145 HIS CA CB sing N N 146 HIS CA HA sing N N 147 HIS C O doub N N 148 HIS C OXT sing N N 149 HIS CB CG sing N N 150 HIS CB HB2 sing N N 151 HIS CB HB3 sing N N 152 HIS CG ND1 sing Y N 153 HIS CG CD2 doub Y N 154 HIS ND1 CE1 doub Y N 155 HIS ND1 HD1 sing N N 156 HIS CD2 NE2 sing Y N 157 HIS CD2 HD2 sing N N 158 HIS CE1 NE2 sing Y N 159 HIS CE1 HE1 sing N N 160 HIS NE2 HE2 sing N N 161 HIS OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 MET N CA sing N N 231 MET N H sing N N 232 MET N H2 sing N N 233 MET CA C sing N N 234 MET CA CB sing N N 235 MET CA HA sing N N 236 MET C O doub N N 237 MET C OXT sing N N 238 MET CB CG sing N N 239 MET CB HB2 sing N N 240 MET CB HB3 sing N N 241 MET CG SD sing N N 242 MET CG HG2 sing N N 243 MET CG HG3 sing N N 244 MET SD CE sing N N 245 MET CE HE1 sing N N 246 MET CE HE2 sing N N 247 MET CE HE3 sing N N 248 MET OXT HXT sing N N 249 PHE N CA sing N N 250 PHE N H sing N N 251 PHE N H2 sing N N 252 PHE CA C sing N N 253 PHE CA CB sing N N 254 PHE CA HA sing N N 255 PHE C O doub N N 256 PHE C OXT sing N N 257 PHE CB CG sing N N 258 PHE CB HB2 sing N N 259 PHE CB HB3 sing N N 260 PHE CG CD1 doub Y N 261 PHE CG CD2 sing Y N 262 PHE CD1 CE1 sing Y N 263 PHE CD1 HD1 sing N N 264 PHE CD2 CE2 doub Y N 265 PHE CD2 HD2 sing N N 266 PHE CE1 CZ doub Y N 267 PHE CE1 HE1 sing N N 268 PHE CE2 CZ sing Y N 269 PHE CE2 HE2 sing N N 270 PHE CZ HZ sing N N 271 PHE OXT HXT sing N N 272 PRO N CA sing N N 273 PRO N CD sing N N 274 PRO N H sing N N 275 PRO CA C sing N N 276 PRO CA CB sing N N 277 PRO CA HA sing N N 278 PRO C O doub N N 279 PRO C OXT sing N N 280 PRO CB CG sing N N 281 PRO CB HB2 sing N N 282 PRO CB HB3 sing N N 283 PRO CG CD sing N N 284 PRO CG HG2 sing N N 285 PRO CG HG3 sing N N 286 PRO CD HD2 sing N N 287 PRO CD HD3 sing N N 288 PRO OXT HXT sing N N 289 SER N CA sing N N 290 SER N H sing N N 291 SER N H2 sing N N 292 SER CA C sing N N 293 SER CA CB sing N N 294 SER CA HA sing N N 295 SER C O doub N N 296 SER C OXT sing N N 297 SER CB OG sing N N 298 SER CB HB2 sing N N 299 SER CB HB3 sing N N 300 SER OG HG sing N N 301 SER OXT HXT sing N N 302 THR N CA sing N N 303 THR N H sing N N 304 THR N H2 sing N N 305 THR CA C sing N N 306 THR CA CB sing N N 307 THR CA HA sing N N 308 THR C O doub N N 309 THR C OXT sing N N 310 THR CB OG1 sing N N 311 THR CB CG2 sing N N 312 THR CB HB sing N N 313 THR OG1 HG1 sing N N 314 THR CG2 HG21 sing N N 315 THR CG2 HG22 sing N N 316 THR CG2 HG23 sing N N 317 THR OXT HXT sing N N 318 TRP N CA sing N N 319 TRP N H sing N N 320 TRP N H2 sing N N 321 TRP CA C sing N N 322 TRP CA CB sing N N 323 TRP CA HA sing N N 324 TRP C O doub N N 325 TRP C OXT sing N N 326 TRP CB CG sing N N 327 TRP CB HB2 sing N N 328 TRP CB HB3 sing N N 329 TRP CG CD1 doub Y N 330 TRP CG CD2 sing Y N 331 TRP CD1 NE1 sing Y N 332 TRP CD1 HD1 sing N N 333 TRP CD2 CE2 doub Y N 334 TRP CD2 CE3 sing Y N 335 TRP NE1 CE2 sing Y N 336 TRP NE1 HE1 sing N N 337 TRP CE2 CZ2 sing Y N 338 TRP CE3 CZ3 doub Y N 339 TRP CE3 HE3 sing N N 340 TRP CZ2 CH2 doub Y N 341 TRP CZ2 HZ2 sing N N 342 TRP CZ3 CH2 sing Y N 343 TRP CZ3 HZ3 sing N N 344 TRP CH2 HH2 sing N N 345 TRP OXT HXT sing N N 346 TYR N CA sing N N 347 TYR N H sing N N 348 TYR N H2 sing N N 349 TYR CA C sing N N 350 TYR CA CB sing N N 351 TYR CA HA sing N N 352 TYR C O doub N N 353 TYR C OXT sing N N 354 TYR CB CG sing N N 355 TYR CB HB2 sing N N 356 TYR CB HB3 sing N N 357 TYR CG CD1 doub Y N 358 TYR CG CD2 sing Y N 359 TYR CD1 CE1 sing Y N 360 TYR CD1 HD1 sing N N 361 TYR CD2 CE2 doub Y N 362 TYR CD2 HD2 sing N N 363 TYR CE1 CZ doub Y N 364 TYR CE1 HE1 sing N N 365 TYR CE2 CZ sing Y N 366 TYR CE2 HE2 sing N N 367 TYR CZ OH sing N N 368 TYR OH HH sing N N 369 TYR OXT HXT sing N N 370 U5P N1 C2 sing N N 371 U5P N1 C6 sing N N 372 U5P N1 "C1'" sing N N 373 U5P C2 N3 sing N N 374 U5P C2 O2 doub N N 375 U5P N3 C4 sing N N 376 U5P N3 HN3 sing N N 377 U5P C4 C5 sing N N 378 U5P C4 O4 doub N N 379 U5P C5 C6 doub N N 380 U5P C5 H5 sing N N 381 U5P C6 H6 sing N N 382 U5P "C1'" "C2'" sing N N 383 U5P "C1'" "O4'" sing N N 384 U5P "C1'" "H1'" sing N N 385 U5P "C2'" "O2'" sing N N 386 U5P "C2'" "C3'" sing N N 387 U5P "C2'" "H2'" sing N N 388 U5P "O2'" "HO2'" sing N N 389 U5P "C3'" "C4'" sing N N 390 U5P "C3'" "O3'" sing N N 391 U5P "C3'" "H3'" sing N N 392 U5P "C4'" "O4'" sing N N 393 U5P "C4'" "C5'" sing N N 394 U5P "C4'" "H4'" sing N N 395 U5P "O3'" "HO3'" sing N N 396 U5P "C5'" "O5'" sing N N 397 U5P "C5'" "H5'1" sing N N 398 U5P "C5'" "H5'2" sing N N 399 U5P "O5'" P sing N N 400 U5P P O1P doub N N 401 U5P P O2P sing N N 402 U5P P O3P sing N N 403 U5P O2P HOP2 sing N N 404 U5P O3P HOP3 sing N N 405 VAL N CA sing N N 406 VAL N H sing N N 407 VAL N H2 sing N N 408 VAL CA C sing N N 409 VAL CA CB sing N N 410 VAL CA HA sing N N 411 VAL C O doub N N 412 VAL C OXT sing N N 413 VAL CB CG1 sing N N 414 VAL CB CG2 sing N N 415 VAL CB HB sing N N 416 VAL CG1 HG11 sing N N 417 VAL CG1 HG12 sing N N 418 VAL CG1 HG13 sing N N 419 VAL CG2 HG21 sing N N 420 VAL CG2 HG22 sing N N 421 VAL CG2 HG23 sing N N 422 VAL OXT HXT sing N N 423 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R01 GM065166' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R35 GM118131' 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 "URIDINE-5'-MONOPHOSPHATE" U5P 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4H7W _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #