HEADER OXIDOREDUCTASE 06-MAR-17 5V2T TITLE ETHYLENE FORMING ENZYME IN COMPLEX WITH MANGANESE AND TARTRATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-OXOGLUTARATE-DEPENDENT ETHYLENE/SUCCINATE-FORMING ENZYME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ETHYLENE-FORMING ENZYME,2-OXOGLUTARATE DIOXYGENASE COMPND 5 (ETHYLENE-FORMING),2-OXOGLUTARATE/L-ARGININE COMPND 6 MONOOXYGENASE/DECARBOXYLASE (SUCCINATE-FORMING); COMPND 7 EC: 1.13.12.19,1.14.11.34; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SAVASTANOI PV. PHASEOLICOLA; SOURCE 3 ORGANISM_TAXID: 319; SOURCE 4 GENE: EFE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 GOLD (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ETHYLENE BIOSYNTHESIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.FELLNER,S.MARTINEZ,J.HU,R.P.HAUSINGER REVDAT 4 01-JAN-20 5V2T 1 REMARK REVDAT 3 27-SEP-17 5V2T 1 REMARK REVDAT 2 13-SEP-17 5V2T 1 JRNL REVDAT 1 16-AUG-17 5V2T 0 JRNL AUTH S.MARTINEZ,M.FELLNER,C.Q.HERR,A.RITCHIE,J.HU,R.P.HAUSINGER JRNL TITL STRUCTURES AND MECHANISMS OF THE NON-HEME FE(II)- AND JRNL TITL 2 2-OXOGLUTARATE-DEPENDENT ETHYLENE-FORMING ENZYME: SUBSTRATE JRNL TITL 3 BINDING CREATES A TWIST. JRNL REF J. AM. CHEM. SOC. V. 139 11980 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28780854 JRNL DOI 10.1021/JACS.7B06186 REMARK 2 REMARK 2 RESOLUTION. 1.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 215771 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.139 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 5518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.0301 - 3.8125 0.96 6579 376 0.1677 0.1688 REMARK 3 2 3.8125 - 3.0262 1.00 6889 330 0.1412 0.1552 REMARK 3 3 3.0262 - 2.6437 1.00 6831 369 0.1418 0.1504 REMARK 3 4 2.6437 - 2.4020 1.00 6793 430 0.1312 0.1294 REMARK 3 5 2.4020 - 2.2298 1.00 6905 353 0.1247 0.1421 REMARK 3 6 2.2298 - 2.0984 1.00 6879 332 0.1235 0.1346 REMARK 3 7 2.0984 - 1.9933 1.00 6862 355 0.1194 0.1124 REMARK 3 8 1.9933 - 1.9065 1.00 6888 352 0.1222 0.1390 REMARK 3 9 1.9065 - 1.8331 1.00 6901 329 0.1191 0.1408 REMARK 3 10 1.8331 - 1.7698 1.00 6941 293 0.1171 0.1548 REMARK 3 11 1.7698 - 1.7145 1.00 6851 355 0.1161 0.1335 REMARK 3 12 1.7145 - 1.6655 1.00 6839 331 0.1140 0.1296 REMARK 3 13 1.6655 - 1.6216 1.00 6906 388 0.1113 0.1363 REMARK 3 14 1.6216 - 1.5821 1.00 6907 338 0.1058 0.1249 REMARK 3 15 1.5821 - 1.5461 1.00 6847 402 0.1087 0.1272 REMARK 3 16 1.5461 - 1.5132 1.00 6838 332 0.1121 0.1400 REMARK 3 17 1.5132 - 1.4829 1.00 6856 356 0.1197 0.1424 REMARK 3 18 1.4829 - 1.4549 1.00 6861 334 0.1239 0.1588 REMARK 3 19 1.4549 - 1.4290 1.00 6881 322 0.1320 0.1519 REMARK 3 20 1.4290 - 1.4047 1.00 6865 404 0.1389 0.1649 REMARK 3 21 1.4047 - 1.3821 1.00 6812 410 0.1475 0.1812 REMARK 3 22 1.3821 - 1.3608 1.00 6871 416 0.1555 0.1841 REMARK 3 23 1.3608 - 1.3408 1.00 6782 402 0.1562 0.1679 REMARK 3 24 1.3408 - 1.3219 1.00 6847 334 0.1642 0.1931 REMARK 3 25 1.3219 - 1.3040 1.00 6863 332 0.1728 0.1975 REMARK 3 26 1.3040 - 1.2871 1.00 6900 335 0.1844 0.1979 REMARK 3 27 1.2871 - 1.2710 1.00 6891 355 0.1999 0.2093 REMARK 3 28 1.2710 - 1.2557 1.00 6928 372 0.2160 0.2552 REMARK 3 29 1.2557 - 1.2411 1.00 6867 347 0.2286 0.2527 REMARK 3 30 1.2411 - 1.2272 0.91 6146 361 0.2724 0.2998 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2896 REMARK 3 ANGLE : 0.928 3937 REMARK 3 CHIRALITY : 0.073 415 REMARK 3 PLANARITY : 0.007 522 REMARK 3 DIHEDRAL : 13.213 1070 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V2T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226794. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.28 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 222554 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.227 REMARK 200 RESOLUTION RANGE LOW (A) : 48.991 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.25 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.97200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER 2.7.16, SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 UL 59 MG/ML EFE (1.2 MM MANGANESE REMARK 280 CHLORIDE, 25 MM HEPES PH 8.0, 1 MM TCEP, + 0.720 MM 2- REMARK 280 OXOGLUTARATE, + 0.720 MM L-ARGININE) WAS MIXED WITH 1 UL REMARK 280 RESERVOIR SOLUTION. THE SITTING DROP RESERVOIR OF 200 UL REMARK 280 CONTAINED 1000 MM POTASSIUM SODIUM TARTRATE, 100 MM MES/ SODIUM REMARK 280 HYDROXIDE PH 6.0. THE CRYSTAL WAS SOAKED FOR ABOUT A MINUTE IN REMARK 280 25% GLYCEROL, 75% RESERVOIR SOLUTION BEFORE FREEZING IT., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.91600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.89250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 48.99100 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.91600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.89250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.99100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.91600 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.89250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.99100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.91600 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.89250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.99100 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ARG A 346 REMARK 465 ALA A 347 REMARK 465 THR A 348 REMARK 465 GLY A 349 REMARK 465 SER A 350 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 3 CG OD1 ND2 REMARK 470 THR A 345 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 174 OE1 GLU A 276 1.59 REMARK 500 O HOH A 539 O HOH A 669 1.84 REMARK 500 O HOH A 752 O HOH A 835 1.88 REMARK 500 O HOH A 539 O HOH A 642 1.95 REMARK 500 O HOH A 662 O HOH A 900 1.98 REMARK 500 O HOH A 657 O HOH A 859 1.99 REMARK 500 O HOH A 506 O HOH A 868 2.00 REMARK 500 O HOH A 501 O HOH A 905 2.04 REMARK 500 O HOH A 810 O HOH A 895 2.06 REMARK 500 O HOH A 819 O HOH A 870 2.08 REMARK 500 O HOH A 577 O HOH A 820 2.09 REMARK 500 O HOH A 871 O HOH A 920 2.12 REMARK 500 O HOH A 525 O HOH A 717 2.16 REMARK 500 O HOH A 679 O HOH A 820 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 ND2 ASN A 301 ND2 ASN A 301 2665 1.71 REMARK 500 O HOH A 556 O HOH A 748 6554 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 115 -1.79 80.16 REMARK 500 SER A 180 -166.67 -160.69 REMARK 500 ASP A 201 -166.15 -77.30 REMARK 500 LYS A 340 10.28 -68.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 966 DISTANCE = 6.69 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 401 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 189 NE2 REMARK 620 2 ASP A 191 OD1 96.8 REMARK 620 3 HIS A 268 NE2 84.9 90.0 REMARK 620 4 HOH A 641 O 91.6 93.0 175.7 REMARK 620 5 HOH A 524 O 175.2 87.6 93.4 89.8 REMARK 620 6 TLA A 402 O41 91.0 172.1 91.6 85.8 84.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TLA A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V2U RELATED DB: PDB REMARK 900 RELATED ID: 5V2V RELATED DB: PDB REMARK 900 RELATED ID: 5V2X RELATED DB: PDB REMARK 900 RELATED ID: 5V2Y RELATED DB: PDB REMARK 900 RELATED ID: 5V2Z RELATED DB: PDB REMARK 900 RELATED ID: 5V31 RELATED DB: PDB REMARK 900 RELATED ID: 5V32 RELATED DB: PDB REMARK 900 RELATED ID: 5V34 RELATED DB: PDB DBREF 5V2T A 1 350 UNP P32021 EFE_PSESH 1 350 SEQADV 5V2T SER A -1 UNP P32021 EXPRESSION TAG SEQADV 5V2T HIS A 0 UNP P32021 EXPRESSION TAG SEQRES 1 A 352 SER HIS MSE THR ASN LEU GLN THR PHE GLU LEU PRO THR SEQRES 2 A 352 GLU VAL THR GLY CYS ALA ALA ASP ILE SER LEU GLY ARG SEQRES 3 A 352 ALA LEU ILE GLN ALA TRP GLN LYS ASP GLY ILE PHE GLN SEQRES 4 A 352 ILE LYS THR ASP SER GLU GLN ASP ARG LYS THR GLN GLU SEQRES 5 A 352 ALA MSE ALA ALA SER LYS GLN PHE CYS LYS GLU PRO LEU SEQRES 6 A 352 THR PHE LYS SER SER CYS VAL SER ASP LEU THR TYR SER SEQRES 7 A 352 GLY TYR VAL ALA SER GLY GLU GLU VAL THR ALA GLY LYS SEQRES 8 A 352 PRO ASP PHE PRO GLU ILE PHE THR VAL CYS LYS ASP LEU SEQRES 9 A 352 SER VAL GLY ASP GLN ARG VAL LYS ALA GLY TRP PRO CYS SEQRES 10 A 352 HIS GLY PRO VAL PRO TRP PRO ASN ASN THR TYR GLN LYS SEQRES 11 A 352 SER MSE LYS THR PHE MSE GLU GLU LEU GLY LEU ALA GLY SEQRES 12 A 352 GLU ARG LEU LEU LYS LEU THR ALA LEU GLY PHE GLU LEU SEQRES 13 A 352 PRO ILE ASN THR PHE THR ASP LEU THR ARG ASP GLY TRP SEQRES 14 A 352 HIS HIS MSE ARG VAL LEU ARG PHE PRO PRO GLN THR SER SEQRES 15 A 352 THR LEU SER ARG GLY ILE GLY ALA HIS THR ASP TYR GLY SEQRES 16 A 352 LEU LEU VAL ILE ALA ALA GLN ASP ASP VAL GLY GLY LEU SEQRES 17 A 352 TYR ILE ARG PRO PRO VAL GLU GLY GLU LYS ARG ASN ARG SEQRES 18 A 352 ASN TRP LEU PRO GLY GLU SER SER ALA GLY MSE PHE GLU SEQRES 19 A 352 HIS ASP GLU PRO TRP THR PHE VAL THR PRO THR PRO GLY SEQRES 20 A 352 VAL TRP THR VAL PHE PRO GLY ASP ILE LEU GLN PHE MSE SEQRES 21 A 352 THR GLY GLY GLN LEU LEU SER THR PRO HIS LYS VAL LYS SEQRES 22 A 352 LEU ASN THR ARG GLU ARG PHE ALA CYS ALA TYR PHE HIS SEQRES 23 A 352 GLU PRO ASN PHE GLU ALA SER ALA TYR PRO LEU PHE GLU SEQRES 24 A 352 PRO SER ALA ASN GLU ARG ILE HIS TYR GLY GLU HIS PHE SEQRES 25 A 352 THR ASN MSE PHE MSE ARG CYS TYR PRO ASP ARG ILE THR SEQRES 26 A 352 THR GLN ARG ILE ASN LYS GLU ASN ARG LEU ALA HIS LEU SEQRES 27 A 352 GLU ASP LEU LYS LYS TYR SER ASP THR ARG ALA THR GLY SEQRES 28 A 352 SER MODRES 5V2T MSE A 52 MET MODIFIED RESIDUE MODRES 5V2T MSE A 130 MET MODIFIED RESIDUE MODRES 5V2T MSE A 134 MET MODIFIED RESIDUE MODRES 5V2T MSE A 170 MET MODIFIED RESIDUE MODRES 5V2T MSE A 230 MET MODIFIED RESIDUE MODRES 5V2T MSE A 258 MET MODIFIED RESIDUE MODRES 5V2T MSE A 313 MET MODIFIED RESIDUE MODRES 5V2T MSE A 315 MET MODIFIED RESIDUE HET MSE A 52 17 HET MSE A 130 17 HET MSE A 134 17 HET MSE A 170 17 HET MSE A 230 34 HET MSE A 258 17 HET MSE A 313 17 HET MSE A 315 17 HET MN A 401 1 HET TLA A 402 14 HETNAM MSE SELENOMETHIONINE HETNAM MN MANGANESE (II) ION HETNAM TLA L(+)-TARTARIC ACID FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 MN MN 2+ FORMUL 3 TLA C4 H6 O6 FORMUL 4 HOH *466(H2 O) HELIX 1 AA1 CYS A 16 GLY A 34 1 19 HELIX 2 AA2 ASP A 41 LYS A 60 1 20 HELIX 3 AA3 PRO A 62 SER A 67 1 6 HELIX 4 AA4 ASP A 106 ALA A 111 1 6 HELIX 5 AA5 ASN A 123 PHE A 152 1 30 HELIX 6 AA6 GLY A 252 THR A 259 1 8 HELIX 7 AA7 TYR A 306 TYR A 318 1 13 HELIX 8 AA8 ARG A 321 ASN A 331 1 11 HELIX 9 AA9 ARG A 332 LYS A 340 1 9 SHEET 1 AA1 8 THR A 6 PHE A 7 0 SHEET 2 AA1 8 PHE A 36 LYS A 39 1 O LYS A 39 N PHE A 7 SHEET 3 AA1 8 VAL A 246 PRO A 251 -1 O TRP A 247 N ILE A 38 SHEET 4 AA1 8 LEU A 195 GLN A 200 -1 N ALA A 198 O THR A 248 SHEET 5 AA1 8 ARG A 277 HIS A 284 -1 O TYR A 282 N ILE A 197 SHEET 6 AA1 8 HIS A 169 PHE A 175 -1 N HIS A 169 O PHE A 283 SHEET 7 AA1 8 GLU A 94 VAL A 98 -1 N VAL A 98 O MSE A 170 SHEET 8 AA1 8 GLY A 77 VAL A 79 -1 N VAL A 79 O ILE A 95 SHEET 1 AA2 2 VAL A 85 THR A 86 0 SHEET 2 AA2 2 LYS A 89 PRO A 90 -1 O LYS A 89 N THR A 86 SHEET 1 AA3 4 ARG A 184 HIS A 189 0 SHEET 2 AA3 4 HIS A 268 LYS A 271 -1 O HIS A 268 N HIS A 189 SHEET 3 AA3 4 LEU A 206 ILE A 208 -1 N TYR A 207 O LYS A 269 SHEET 4 AA3 4 THR A 238 PHE A 239 -1 O THR A 238 N ILE A 208 SHEET 1 AA4 2 SER A 291 ALA A 292 0 SHEET 2 AA4 2 ILE A 304 HIS A 305 -1 O ILE A 304 N ALA A 292 LINK C ALA A 51 N MSE A 52 1555 1555 1.33 LINK C MSE A 52 N ALA A 53 1555 1555 1.33 LINK C SER A 129 N MSE A 130 1555 1555 1.33 LINK C MSE A 130 N LYS A 131 1555 1555 1.33 LINK C PHE A 133 N MSE A 134 1555 1555 1.33 LINK C MSE A 134 N GLU A 135 1555 1555 1.33 LINK C HIS A 169 N MSE A 170 1555 1555 1.33 LINK C MSE A 170 N ARG A 171 1555 1555 1.33 LINK NE2 HIS A 189 MN MN A 401 1555 1555 2.26 LINK OD1 ASP A 191 MN MN A 401 1555 1555 2.18 LINK C GLY A 229 N AMSE A 230 1555 1555 1.32 LINK C GLY A 229 N BMSE A 230 1555 1555 1.33 LINK C AMSE A 230 N PHE A 231 1555 1555 1.33 LINK C BMSE A 230 N PHE A 231 1555 1555 1.34 LINK C PHE A 257 N MSE A 258 1555 1555 1.33 LINK C MSE A 258 N THR A 259 1555 1555 1.33 LINK NE2 HIS A 268 MN MN A 401 1555 1555 2.23 LINK C ASN A 312 N MSE A 313 1555 1555 1.33 LINK C MSE A 313 N PHE A 314 1555 1555 1.33 LINK C PHE A 314 N MSE A 315 1555 1555 1.33 LINK C MSE A 315 N ARG A 316 1555 1555 1.34 LINK MN MN A 401 O HOH A 641 1555 1555 2.21 LINK MN MN A 401 O HOH A 524 1555 1555 2.25 LINK MN MN A 401 O41 TLA A 402 1555 1555 2.20 CISPEP 1 GLU A 235 PRO A 236 0 2.04 SITE 1 AC1 6 HIS A 189 ASP A 191 HIS A 268 TLA A 402 SITE 2 AC1 6 HOH A 524 HOH A 641 SITE 1 AC2 13 ARG A 171 LEU A 173 PHE A 175 ILE A 186 SITE 2 AC2 13 HIS A 189 HIS A 268 VAL A 270 ARG A 277 SITE 3 AC2 13 ALA A 281 MN A 401 HOH A 524 HOH A 641 SITE 4 AC2 13 HOH A 657 CRYST1 79.832 97.785 97.982 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012526 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010227 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010206 0.00000