HEADER OXIDOREDUCTASE 06-MAR-17 5V31 TITLE ETHYLENE FORMING ENZYME IN COMPLEX WITH MANGANESE AND L-ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2-OXOGLUTARATE-DEPENDENT ETHYLENE/SUCCINATE-FORMING ENZYME; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ETHYLENE-FORMING ENZYME,2-OXOGLUTARATE DIOXYGENASE COMPND 5 (ETHYLENE-FORMING),2-OXOGLUTARATE/L-ARGININE COMPND 6 MONOOXYGENASE/DECARBOXYLASE (SUCCINATE-FORMING); COMPND 7 EC: 1.13.12.19,1.14.11.34; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SAVASTANOI PV. PHASEOLICOLA; SOURCE 3 ORGANISM_TAXID: 319; SOURCE 4 GENE: EFE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 GOLD (DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS ETHYLENE BIOSYNTHESIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.FELLNER,S.MARTINEZ,J.HU,R.P.HAUSINGER REVDAT 5 04-OCT-23 5V31 1 REMARK REVDAT 4 01-JAN-20 5V31 1 REMARK REVDAT 3 27-SEP-17 5V31 1 REMARK REVDAT 2 13-SEP-17 5V31 1 JRNL REVDAT 1 16-AUG-17 5V31 0 JRNL AUTH S.MARTINEZ,M.FELLNER,C.Q.HERR,A.RITCHIE,J.HU,R.P.HAUSINGER JRNL TITL STRUCTURES AND MECHANISMS OF THE NON-HEME FE(II)- AND JRNL TITL 2 2-OXOGLUTARATE-DEPENDENT ETHYLENE-FORMING ENZYME: SUBSTRATE JRNL TITL 3 BINDING CREATES A TWIST. JRNL REF J. AM. CHEM. SOC. V. 139 11980 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28780854 JRNL DOI 10.1021/JACS.7B06186 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.6 REMARK 3 NUMBER OF REFLECTIONS : 11324 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.370 REMARK 3 FREE R VALUE TEST SET COUNT : 559 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.5869 - 4.6854 0.89 2996 140 0.1614 0.1886 REMARK 3 2 4.6854 - 3.7196 0.92 3046 186 0.1345 0.2207 REMARK 3 3 3.7196 - 3.2496 0.94 3193 121 0.1635 0.2555 REMARK 3 4 3.2496 - 2.9526 0.95 3213 145 0.1990 0.2804 REMARK 3 5 2.9526 - 2.7410 0.88 2950 132 0.2148 0.2918 REMARK 3 6 2.7410 - 2.5794 0.92 3091 139 0.2312 0.2783 REMARK 3 7 2.5794 - 2.4502 0.93 3171 126 0.2389 0.3108 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 2799 REMARK 3 ANGLE : 0.915 3793 REMARK 3 CHIRALITY : 0.050 403 REMARK 3 PLANARITY : 0.006 496 REMARK 3 DIHEDRAL : 2.894 2311 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:41 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.997 2.211 -11.973 REMARK 3 T TENSOR REMARK 3 T11: 0.1900 T22: 0.1071 REMARK 3 T33: 0.1559 T12: -0.0236 REMARK 3 T13: 0.0083 T23: 0.0341 REMARK 3 L TENSOR REMARK 3 L11: 1.9430 L22: 2.3577 REMARK 3 L33: 2.1757 L12: -0.3992 REMARK 3 L13: 1.2325 L23: 1.3400 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: 0.1009 S13: 0.3055 REMARK 3 S21: -0.3007 S22: 0.0242 S23: -0.1965 REMARK 3 S31: -0.4174 S32: 0.0148 S33: -0.0506 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 42:123 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.012 1.945 14.927 REMARK 3 T TENSOR REMARK 3 T11: 0.1011 T22: 0.1426 REMARK 3 T33: 0.1336 T12: 0.0115 REMARK 3 T13: -0.0025 T23: -0.0199 REMARK 3 L TENSOR REMARK 3 L11: 0.9280 L22: 0.9816 REMARK 3 L33: 1.3087 L12: 0.3857 REMARK 3 L13: 0.2344 L23: 0.0042 REMARK 3 S TENSOR REMARK 3 S11: 0.0500 S12: 0.0230 S13: -0.0305 REMARK 3 S21: 0.0192 S22: -0.0048 S23: -0.0871 REMARK 3 S31: -0.0389 S32: 0.0772 S33: -0.0307 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 124:151 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.331 3.281 4.471 REMARK 3 T TENSOR REMARK 3 T11: 0.2157 T22: 0.1974 REMARK 3 T33: 0.1795 T12: -0.0384 REMARK 3 T13: 0.0644 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 3.5722 L22: 4.9713 REMARK 3 L33: 2.0033 L12: 3.7568 REMARK 3 L13: 6.3546 L23: 7.1345 REMARK 3 S TENSOR REMARK 3 S11: 0.0377 S12: -0.2504 S13: 0.2483 REMARK 3 S21: 0.1769 S22: -0.3164 S23: 0.1898 REMARK 3 S31: 0.1900 S32: -0.4756 S33: 0.2741 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 152:342 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.571 -6.753 1.072 REMARK 3 T TENSOR REMARK 3 T11: 0.1391 T22: 0.1719 REMARK 3 T33: 0.1418 T12: 0.0247 REMARK 3 T13: -0.0045 T23: -0.0357 REMARK 3 L TENSOR REMARK 3 L11: 1.0946 L22: 1.1880 REMARK 3 L33: 1.8172 L12: 0.1273 REMARK 3 L13: 0.2248 L23: -0.1404 REMARK 3 S TENSOR REMARK 3 S11: 0.0216 S12: 0.0417 S13: -0.1680 REMARK 3 S21: -0.0140 S22: -0.0007 S23: -0.1988 REMARK 3 S31: 0.1979 S32: 0.2191 S33: -0.0092 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN A AND RESID 401:401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.308 -5.822 4.854 REMARK 3 T TENSOR REMARK 3 T11: 0.5205 T22: 0.2721 REMARK 3 T33: 0.2718 T12: 0.0857 REMARK 3 T13: -0.0182 T23: -0.1185 REMARK 3 L TENSOR REMARK 3 L11: 7.7533 L22: 7.3506 REMARK 3 L33: 2.0000 L12: 4.9594 REMARK 3 L13: -3.3178 L23: 3.5058 REMARK 3 S TENSOR REMARK 3 S11: 0.0571 S12: 0.0805 S13: -0.1424 REMARK 3 S21: -0.1626 S22: -0.0902 S23: -0.1076 REMARK 3 S31: 0.6190 S32: 0.3088 S33: 0.0328 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V31 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1272 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.31 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12891 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 87.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.56500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.16 REMARK 200 STARTING MODEL: 5V2T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 UL 64 MG/ML EFE (+4 MM MANGANESE REMARK 280 CHLORIDE, 25 MM HEPES PH 8.0, 1 MM TCEP, +2.5 MM L-ARGININE) WAS REMARK 280 MIXED WITH 0.2 UL RESERVOIR SOLUTION. THE SITTING DROP RESERVOIR REMARK 280 OF 50 UL CONTAINED 0.1 M HEPES/ SODIUM HYDROXIDE PH 7.5, 25% W/V REMARK 280 POLYETHYLENE GLYCOL 10,000. THE CRYSTAL WAS SOAKED FOR ABOUT A REMARK 280 MINUTE IN 25% W/V POLYETHYLENE GLYCOL 400, 75% RESERVOIR REMARK 280 SOLUTION BEFORE FREEZING IT., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.31500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.58000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.58000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.31500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 343 REMARK 465 ASP A 344 REMARK 465 THR A 345 REMARK 465 ARG A 346 REMARK 465 ALA A 347 REMARK 465 THR A 348 REMARK 465 GLY A 349 REMARK 465 SER A 350 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 3 CG OD1 ND2 REMARK 470 GLU A 297 CD OE1 OE2 REMARK 470 ASN A 301 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 591 O HOH A 620 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 115 -5.16 72.40 REMARK 500 TRP A 167 44.80 -82.44 REMARK 500 LEU A 194 -60.24 -91.55 REMARK 500 ASP A 201 -168.93 -71.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 189 NE2 REMARK 620 2 ASP A 191 OD1 81.6 REMARK 620 3 ASP A 191 OD2 118.2 51.6 REMARK 620 4 HIS A 268 NE2 85.2 104.3 72.7 REMARK 620 5 HOH A 591 O 101.9 109.1 127.9 146.5 REMARK 620 6 HOH A 620 O 110.4 153.6 129.7 100.2 46.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V2T RELATED DB: PDB REMARK 900 RELATED ID: 5V2U RELATED DB: PDB REMARK 900 RELATED ID: 5V2V RELATED DB: PDB REMARK 900 RELATED ID: 5V2X RELATED DB: PDB REMARK 900 RELATED ID: 5V2Y RELATED DB: PDB REMARK 900 RELATED ID: 5V2Z RELATED DB: PDB REMARK 900 RELATED ID: 5V32 RELATED DB: PDB REMARK 900 RELATED ID: 5V34 RELATED DB: PDB DBREF 5V31 A 1 350 UNP P32021 EFE_PSESH 1 350 SEQADV 5V31 SER A -1 UNP P32021 EXPRESSION TAG SEQADV 5V31 HIS A 0 UNP P32021 EXPRESSION TAG SEQRES 1 A 352 SER HIS MET THR ASN LEU GLN THR PHE GLU LEU PRO THR SEQRES 2 A 352 GLU VAL THR GLY CYS ALA ALA ASP ILE SER LEU GLY ARG SEQRES 3 A 352 ALA LEU ILE GLN ALA TRP GLN LYS ASP GLY ILE PHE GLN SEQRES 4 A 352 ILE LYS THR ASP SER GLU GLN ASP ARG LYS THR GLN GLU SEQRES 5 A 352 ALA MET ALA ALA SER LYS GLN PHE CYS LYS GLU PRO LEU SEQRES 6 A 352 THR PHE LYS SER SER CYS VAL SER ASP LEU THR TYR SER SEQRES 7 A 352 GLY TYR VAL ALA SER GLY GLU GLU VAL THR ALA GLY LYS SEQRES 8 A 352 PRO ASP PHE PRO GLU ILE PHE THR VAL CYS LYS ASP LEU SEQRES 9 A 352 SER VAL GLY ASP GLN ARG VAL LYS ALA GLY TRP PRO CYS SEQRES 10 A 352 HIS GLY PRO VAL PRO TRP PRO ASN ASN THR TYR GLN LYS SEQRES 11 A 352 SER MET LYS THR PHE MET GLU GLU LEU GLY LEU ALA GLY SEQRES 12 A 352 GLU ARG LEU LEU LYS LEU THR ALA LEU GLY PHE GLU LEU SEQRES 13 A 352 PRO ILE ASN THR PHE THR ASP LEU THR ARG ASP GLY TRP SEQRES 14 A 352 HIS HIS MET ARG VAL LEU ARG PHE PRO PRO GLN THR SER SEQRES 15 A 352 THR LEU SER ARG GLY ILE GLY ALA HIS THR ASP TYR GLY SEQRES 16 A 352 LEU LEU VAL ILE ALA ALA GLN ASP ASP VAL GLY GLY LEU SEQRES 17 A 352 TYR ILE ARG PRO PRO VAL GLU GLY GLU LYS ARG ASN ARG SEQRES 18 A 352 ASN TRP LEU PRO GLY GLU SER SER ALA GLY MET PHE GLU SEQRES 19 A 352 HIS ASP GLU PRO TRP THR PHE VAL THR PRO THR PRO GLY SEQRES 20 A 352 VAL TRP THR VAL PHE PRO GLY ASP ILE LEU GLN PHE MET SEQRES 21 A 352 THR GLY GLY GLN LEU LEU SER THR PRO HIS LYS VAL LYS SEQRES 22 A 352 LEU ASN THR ARG GLU ARG PHE ALA CYS ALA TYR PHE HIS SEQRES 23 A 352 GLU PRO ASN PHE GLU ALA SER ALA TYR PRO LEU PHE GLU SEQRES 24 A 352 PRO SER ALA ASN GLU ARG ILE HIS TYR GLY GLU HIS PHE SEQRES 25 A 352 THR ASN MET PHE MET ARG CYS TYR PRO ASP ARG ILE THR SEQRES 26 A 352 THR GLN ARG ILE ASN LYS GLU ASN ARG LEU ALA HIS LEU SEQRES 27 A 352 GLU ASP LEU LYS LYS TYR SER ASP THR ARG ALA THR GLY SEQRES 28 A 352 SER HET ARG A 401 12 HET MN A 402 1 HETNAM ARG ARGININE HETNAM MN MANGANESE (II) ION FORMUL 2 ARG C6 H15 N4 O2 1+ FORMUL 3 MN MN 2+ FORMUL 4 HOH *128(H2 O) HELIX 1 AA1 CYS A 16 GLY A 34 1 19 HELIX 2 AA2 ASP A 41 LYS A 60 1 20 HELIX 3 AA3 PRO A 62 CYS A 69 1 8 HELIX 4 AA4 ASP A 106 ALA A 111 1 6 HELIX 5 AA5 ASN A 123 PHE A 152 1 30 HELIX 6 AA6 PHE A 159 THR A 163 5 5 HELIX 7 AA7 GLY A 252 THR A 259 1 8 HELIX 8 AA8 TYR A 306 TYR A 318 1 13 HELIX 9 AA9 ARG A 321 GLU A 330 1 10 HELIX 10 AB1 ASN A 331 TYR A 342 1 12 SHEET 1 AA1 8 THR A 6 PHE A 7 0 SHEET 2 AA1 8 PHE A 36 LYS A 39 1 O LYS A 39 N PHE A 7 SHEET 3 AA1 8 VAL A 246 PRO A 251 -1 O VAL A 249 N PHE A 36 SHEET 4 AA1 8 LEU A 195 GLN A 200 -1 N ALA A 198 O THR A 248 SHEET 5 AA1 8 ARG A 277 HIS A 284 -1 O TYR A 282 N ILE A 197 SHEET 6 AA1 8 HIS A 169 PHE A 175 -1 N HIS A 169 O PHE A 283 SHEET 7 AA1 8 GLU A 94 VAL A 98 -1 N GLU A 94 O ARG A 174 SHEET 8 AA1 8 GLY A 77 VAL A 79 -1 N GLY A 77 O THR A 97 SHEET 1 AA2 2 VAL A 85 THR A 86 0 SHEET 2 AA2 2 LYS A 89 PRO A 90 -1 O LYS A 89 N THR A 86 SHEET 1 AA3 4 ARG A 184 HIS A 189 0 SHEET 2 AA3 4 HIS A 268 LYS A 271 -1 O HIS A 268 N HIS A 189 SHEET 3 AA3 4 LEU A 206 ILE A 208 -1 N TYR A 207 O LYS A 269 SHEET 4 AA3 4 THR A 238 PHE A 239 -1 O THR A 238 N ILE A 208 SHEET 1 AA4 2 SER A 291 ALA A 292 0 SHEET 2 AA4 2 ILE A 304 HIS A 305 -1 O ILE A 304 N ALA A 292 LINK NE2 HIS A 189 MN MN A 402 1555 1555 2.15 LINK OD1 ASP A 191 MN MN A 402 1555 1555 2.71 LINK OD2 ASP A 191 MN MN A 402 1555 1555 2.23 LINK NE2 HIS A 268 MN MN A 402 1555 1555 2.31 LINK MN MN A 402 O HOH A 591 1555 1555 2.77 LINK MN MN A 402 O HOH A 620 1555 1555 2.63 CISPEP 1 GLU A 235 PRO A 236 0 -5.84 SITE 1 AC1 12 GLU A 84 VAL A 85 THR A 86 ARG A 171 SITE 2 AC1 12 ILE A 186 HIS A 189 ASP A 191 TYR A 192 SITE 3 AC1 12 PHE A 314 ARG A 316 CYS A 317 HOH A 507 SITE 1 AC2 5 HIS A 189 ASP A 191 HIS A 268 HOH A 591 SITE 2 AC2 5 HOH A 620 CRYST1 48.630 81.910 87.160 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020563 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012209 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011473 0.00000