data_5V39 # _entry.id 5V39 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5V39 pdb_00005v39 10.2210/pdb5v39/pdb WWPDB D_1000226820 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-14 2 'Structure model' 1 1 2019-04-03 3 'Structure model' 1 2 2024-03-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5V39 _pdbx_database_status.recvd_initial_deposition_date 2017-03-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, Y.' 1 ? 'Pelletier, L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 923 _citation.page_last 923 _citation.title 'HDX reveals the conformational dynamics of DNA sequence specific VDR co-activator interactions.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-017-00978-7 _citation.pdbx_database_id_PubMed 29030554 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zheng, J.' 1 ? primary 'Chang, M.R.' 2 ? primary 'Stites, R.E.' 3 ? primary 'Wang, Y.' 4 ? primary 'Bruning, J.B.' 5 ? primary 'Pascal, B.D.' 6 ? primary 'Novick, S.J.' 7 ? primary 'Garcia-Ordonez, R.D.' 8 ? primary 'Stayrook, K.R.' 9 ? primary 'Chalmers, M.J.' 10 ? primary 'Dodge, J.A.' 11 ? primary 'Griffin, P.R.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Vitamin D3 receptor' 29159.684 1 ? ? ? ? 2 non-polymer syn '5-(3-{4-[(2S)-2-hydroxy-3,3-dimethylbutoxy]-3-methylphenyl}pentan-3-yl)-3-methyl-N-(1H-tetrazol-5-yl)thiophene-2-carboxamide' 485.642 1 ? ? ? ? 3 water nat water 18.015 87 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VDR,1,25-dihydroxyvitamin D3 receptor,Nuclear receptor subfamily 1 group I member 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELLQLSMLPHLADLVSYSIQKVIGFAKMIP GFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEE HVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPE CSMKLTPLVLEVFGNEG ; _entity_poly.pdbx_seq_one_letter_code_can ;SLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSVTLELLQLSMLPHLADLVSYSIQKVIGFAKMIP GFRDLTSEDQIVLLKSSAIEVIMLRSNESFTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEE HVLLMAICIVSPDRPGVQDAALIEAIQDRLSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPE CSMKLTPLVLEVFGNEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '5-(3-{4-[(2S)-2-hydroxy-3,3-dimethylbutoxy]-3-methylphenyl}pentan-3-yl)-3-methyl-N-(1H-tetrazol-5-yl)thiophene-2-carboxamide' 8VM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LEU n 1 3 ARG n 1 4 PRO n 1 5 LYS n 1 6 LEU n 1 7 SER n 1 8 GLU n 1 9 GLU n 1 10 GLN n 1 11 GLN n 1 12 ARG n 1 13 ILE n 1 14 ILE n 1 15 ALA n 1 16 ILE n 1 17 LEU n 1 18 LEU n 1 19 ASP n 1 20 ALA n 1 21 HIS n 1 22 HIS n 1 23 LYS n 1 24 THR n 1 25 TYR n 1 26 ASP n 1 27 PRO n 1 28 THR n 1 29 TYR n 1 30 SER n 1 31 ASP n 1 32 PHE n 1 33 CYS n 1 34 GLN n 1 35 PHE n 1 36 ARG n 1 37 PRO n 1 38 PRO n 1 39 VAL n 1 40 ARG n 1 41 VAL n 1 42 ASN n 1 43 ASP n 1 44 GLY n 1 45 GLY n 1 46 GLY n 1 47 SER n 1 48 VAL n 1 49 THR n 1 50 LEU n 1 51 GLU n 1 52 LEU n 1 53 LEU n 1 54 GLN n 1 55 LEU n 1 56 SER n 1 57 MET n 1 58 LEU n 1 59 PRO n 1 60 HIS n 1 61 LEU n 1 62 ALA n 1 63 ASP n 1 64 LEU n 1 65 VAL n 1 66 SER n 1 67 TYR n 1 68 SER n 1 69 ILE n 1 70 GLN n 1 71 LYS n 1 72 VAL n 1 73 ILE n 1 74 GLY n 1 75 PHE n 1 76 ALA n 1 77 LYS n 1 78 MET n 1 79 ILE n 1 80 PRO n 1 81 GLY n 1 82 PHE n 1 83 ARG n 1 84 ASP n 1 85 LEU n 1 86 THR n 1 87 SER n 1 88 GLU n 1 89 ASP n 1 90 GLN n 1 91 ILE n 1 92 VAL n 1 93 LEU n 1 94 LEU n 1 95 LYS n 1 96 SER n 1 97 SER n 1 98 ALA n 1 99 ILE n 1 100 GLU n 1 101 VAL n 1 102 ILE n 1 103 MET n 1 104 LEU n 1 105 ARG n 1 106 SER n 1 107 ASN n 1 108 GLU n 1 109 SER n 1 110 PHE n 1 111 THR n 1 112 MET n 1 113 ASP n 1 114 ASP n 1 115 MET n 1 116 SER n 1 117 TRP n 1 118 THR n 1 119 CYS n 1 120 GLY n 1 121 ASN n 1 122 GLN n 1 123 ASP n 1 124 TYR n 1 125 LYS n 1 126 TYR n 1 127 ARG n 1 128 VAL n 1 129 SER n 1 130 ASP n 1 131 VAL n 1 132 THR n 1 133 LYS n 1 134 ALA n 1 135 GLY n 1 136 HIS n 1 137 SER n 1 138 LEU n 1 139 GLU n 1 140 LEU n 1 141 ILE n 1 142 GLU n 1 143 PRO n 1 144 LEU n 1 145 ILE n 1 146 LYS n 1 147 PHE n 1 148 GLN n 1 149 VAL n 1 150 GLY n 1 151 LEU n 1 152 LYS n 1 153 LYS n 1 154 LEU n 1 155 ASN n 1 156 LEU n 1 157 HIS n 1 158 GLU n 1 159 GLU n 1 160 GLU n 1 161 HIS n 1 162 VAL n 1 163 LEU n 1 164 LEU n 1 165 MET n 1 166 ALA n 1 167 ILE n 1 168 CYS n 1 169 ILE n 1 170 VAL n 1 171 SER n 1 172 PRO n 1 173 ASP n 1 174 ARG n 1 175 PRO n 1 176 GLY n 1 177 VAL n 1 178 GLN n 1 179 ASP n 1 180 ALA n 1 181 ALA n 1 182 LEU n 1 183 ILE n 1 184 GLU n 1 185 ALA n 1 186 ILE n 1 187 GLN n 1 188 ASP n 1 189 ARG n 1 190 LEU n 1 191 SER n 1 192 ASN n 1 193 THR n 1 194 LEU n 1 195 GLN n 1 196 THR n 1 197 TYR n 1 198 ILE n 1 199 ARG n 1 200 CYS n 1 201 ARG n 1 202 HIS n 1 203 PRO n 1 204 PRO n 1 205 PRO n 1 206 GLY n 1 207 SER n 1 208 HIS n 1 209 LEU n 1 210 LEU n 1 211 TYR n 1 212 ALA n 1 213 LYS n 1 214 MET n 1 215 ILE n 1 216 GLN n 1 217 LYS n 1 218 LEU n 1 219 ALA n 1 220 ASP n 1 221 LEU n 1 222 ARG n 1 223 SER n 1 224 LEU n 1 225 ASN n 1 226 GLU n 1 227 GLU n 1 228 HIS n 1 229 SER n 1 230 LYS n 1 231 GLN n 1 232 TYR n 1 233 ARG n 1 234 CYS n 1 235 LEU n 1 236 SER n 1 237 PHE n 1 238 GLN n 1 239 PRO n 1 240 GLU n 1 241 CYS n 1 242 SER n 1 243 MET n 1 244 LYS n 1 245 LEU n 1 246 THR n 1 247 PRO n 1 248 LEU n 1 249 VAL n 1 250 LEU n 1 251 GLU n 1 252 VAL n 1 253 PHE n 1 254 GLY n 1 255 ASN n 1 256 GLU n 1 257 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 257 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'VDR, NR1I1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8VM non-polymer . '5-(3-{4-[(2S)-2-hydroxy-3,3-dimethylbutoxy]-3-methylphenyl}pentan-3-yl)-3-methyl-N-(1H-tetrazol-5-yl)thiophene-2-carboxamide' ? 'C25 H35 N5 O3 S' 485.642 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 119 ? ? ? A . n A 1 2 LEU 2 120 ? ? ? A . n A 1 3 ARG 3 121 ? ? ? A . n A 1 4 PRO 4 122 122 PRO PRO A . n A 1 5 LYS 5 123 123 LYS LYS A . n A 1 6 LEU 6 124 124 LEU LEU A . n A 1 7 SER 7 125 125 SER SER A . n A 1 8 GLU 8 126 126 GLU GLU A . n A 1 9 GLU 9 127 127 GLU GLU A . n A 1 10 GLN 10 128 128 GLN GLN A . n A 1 11 GLN 11 129 129 GLN GLN A . n A 1 12 ARG 12 130 130 ARG ARG A . n A 1 13 ILE 13 131 131 ILE ILE A . n A 1 14 ILE 14 132 132 ILE ILE A . n A 1 15 ALA 15 133 133 ALA ALA A . n A 1 16 ILE 16 134 134 ILE ILE A . n A 1 17 LEU 17 135 135 LEU LEU A . n A 1 18 LEU 18 136 136 LEU LEU A . n A 1 19 ASP 19 137 137 ASP ASP A . n A 1 20 ALA 20 138 138 ALA ALA A . n A 1 21 HIS 21 139 139 HIS HIS A . n A 1 22 HIS 22 140 140 HIS HIS A . n A 1 23 LYS 23 141 141 LYS LYS A . n A 1 24 THR 24 142 142 THR THR A . n A 1 25 TYR 25 143 143 TYR TYR A . n A 1 26 ASP 26 144 144 ASP ASP A . n A 1 27 PRO 27 145 145 PRO PRO A . n A 1 28 THR 28 146 146 THR THR A . n A 1 29 TYR 29 147 147 TYR TYR A . n A 1 30 SER 30 148 148 SER SER A . n A 1 31 ASP 31 149 149 ASP ASP A . n A 1 32 PHE 32 150 150 PHE PHE A . n A 1 33 CYS 33 151 151 CYS CYS A . n A 1 34 GLN 34 152 152 GLN GLN A . n A 1 35 PHE 35 153 153 PHE PHE A . n A 1 36 ARG 36 154 154 ARG ARG A . n A 1 37 PRO 37 155 155 PRO PRO A . n A 1 38 PRO 38 156 156 PRO PRO A . n A 1 39 VAL 39 157 157 VAL VAL A . n A 1 40 ARG 40 158 158 ARG ARG A . n A 1 41 VAL 41 159 159 VAL VAL A . n A 1 42 ASN 42 160 160 ASN ASN A . n A 1 43 ASP 43 161 161 ASP ASP A . n A 1 44 GLY 44 162 162 GLY GLY A . n A 1 45 GLY 45 163 163 GLY GLY A . n A 1 46 GLY 46 164 164 GLY GLY A . n A 1 47 SER 47 216 216 SER SER A . n A 1 48 VAL 48 217 217 VAL VAL A . n A 1 49 THR 49 218 218 THR THR A . n A 1 50 LEU 50 219 219 LEU LEU A . n A 1 51 GLU 51 220 220 GLU GLU A . n A 1 52 LEU 52 221 221 LEU LEU A . n A 1 53 LEU 53 222 222 LEU LEU A . n A 1 54 GLN 54 223 223 GLN GLN A . n A 1 55 LEU 55 224 224 LEU LEU A . n A 1 56 SER 56 225 225 SER SER A . n A 1 57 MET 57 226 226 MET MET A . n A 1 58 LEU 58 227 227 LEU LEU A . n A 1 59 PRO 59 228 228 PRO PRO A . n A 1 60 HIS 60 229 229 HIS HIS A . n A 1 61 LEU 61 230 230 LEU LEU A . n A 1 62 ALA 62 231 231 ALA ALA A . n A 1 63 ASP 63 232 232 ASP ASP A . n A 1 64 LEU 64 233 233 LEU LEU A . n A 1 65 VAL 65 234 234 VAL VAL A . n A 1 66 SER 66 235 235 SER SER A . n A 1 67 TYR 67 236 236 TYR TYR A . n A 1 68 SER 68 237 237 SER SER A . n A 1 69 ILE 69 238 238 ILE ILE A . n A 1 70 GLN 70 239 239 GLN GLN A . n A 1 71 LYS 71 240 240 LYS LYS A . n A 1 72 VAL 72 241 241 VAL VAL A . n A 1 73 ILE 73 242 242 ILE ILE A . n A 1 74 GLY 74 243 243 GLY GLY A . n A 1 75 PHE 75 244 244 PHE PHE A . n A 1 76 ALA 76 245 245 ALA ALA A . n A 1 77 LYS 77 246 246 LYS LYS A . n A 1 78 MET 78 247 247 MET MET A . n A 1 79 ILE 79 248 248 ILE ILE A . n A 1 80 PRO 80 249 249 PRO PRO A . n A 1 81 GLY 81 250 250 GLY GLY A . n A 1 82 PHE 82 251 251 PHE PHE A . n A 1 83 ARG 83 252 252 ARG ARG A . n A 1 84 ASP 84 253 253 ASP ASP A . n A 1 85 LEU 85 254 254 LEU LEU A . n A 1 86 THR 86 255 255 THR THR A . n A 1 87 SER 87 256 256 SER SER A . n A 1 88 GLU 88 257 257 GLU GLU A . n A 1 89 ASP 89 258 258 ASP ASP A . n A 1 90 GLN 90 259 259 GLN GLN A . n A 1 91 ILE 91 260 260 ILE ILE A . n A 1 92 VAL 92 261 261 VAL VAL A . n A 1 93 LEU 93 262 262 LEU LEU A . n A 1 94 LEU 94 263 263 LEU LEU A . n A 1 95 LYS 95 264 264 LYS LYS A . n A 1 96 SER 96 265 265 SER SER A . n A 1 97 SER 97 266 266 SER SER A . n A 1 98 ALA 98 267 267 ALA ALA A . n A 1 99 ILE 99 268 268 ILE ILE A . n A 1 100 GLU 100 269 269 GLU GLU A . n A 1 101 VAL 101 270 270 VAL VAL A . n A 1 102 ILE 102 271 271 ILE ILE A . n A 1 103 MET 103 272 272 MET MET A . n A 1 104 LEU 104 273 273 LEU LEU A . n A 1 105 ARG 105 274 274 ARG ARG A . n A 1 106 SER 106 275 275 SER SER A . n A 1 107 ASN 107 276 276 ASN ASN A . n A 1 108 GLU 108 277 277 GLU GLU A . n A 1 109 SER 109 278 278 SER SER A . n A 1 110 PHE 110 279 279 PHE PHE A . n A 1 111 THR 111 280 280 THR THR A . n A 1 112 MET 112 281 281 MET MET A . n A 1 113 ASP 113 282 282 ASP ASP A . n A 1 114 ASP 114 283 283 ASP ASP A . n A 1 115 MET 115 284 284 MET MET A . n A 1 116 SER 116 285 285 SER SER A . n A 1 117 TRP 117 286 286 TRP TRP A . n A 1 118 THR 118 287 287 THR THR A . n A 1 119 CYS 119 288 288 CYS CYS A . n A 1 120 GLY 120 289 289 GLY GLY A . n A 1 121 ASN 121 290 290 ASN ASN A . n A 1 122 GLN 122 291 291 GLN GLN A . n A 1 123 ASP 123 292 292 ASP ASP A . n A 1 124 TYR 124 293 293 TYR TYR A . n A 1 125 LYS 125 294 294 LYS LYS A . n A 1 126 TYR 126 295 295 TYR TYR A . n A 1 127 ARG 127 296 296 ARG ARG A . n A 1 128 VAL 128 297 297 VAL VAL A . n A 1 129 SER 129 298 298 SER SER A . n A 1 130 ASP 130 299 299 ASP ASP A . n A 1 131 VAL 131 300 300 VAL VAL A . n A 1 132 THR 132 301 301 THR THR A . n A 1 133 LYS 133 302 302 LYS LYS A . n A 1 134 ALA 134 303 303 ALA ALA A . n A 1 135 GLY 135 304 304 GLY GLY A . n A 1 136 HIS 136 305 305 HIS HIS A . n A 1 137 SER 137 306 306 SER SER A . n A 1 138 LEU 138 307 307 LEU LEU A . n A 1 139 GLU 139 308 308 GLU GLU A . n A 1 140 LEU 140 309 309 LEU LEU A . n A 1 141 ILE 141 310 310 ILE ILE A . n A 1 142 GLU 142 311 311 GLU GLU A . n A 1 143 PRO 143 312 312 PRO PRO A . n A 1 144 LEU 144 313 313 LEU LEU A . n A 1 145 ILE 145 314 314 ILE ILE A . n A 1 146 LYS 146 315 315 LYS LYS A . n A 1 147 PHE 147 316 316 PHE PHE A . n A 1 148 GLN 148 317 317 GLN GLN A . n A 1 149 VAL 149 318 318 VAL VAL A . n A 1 150 GLY 150 319 319 GLY GLY A . n A 1 151 LEU 151 320 320 LEU LEU A . n A 1 152 LYS 152 321 321 LYS LYS A . n A 1 153 LYS 153 322 322 LYS LYS A . n A 1 154 LEU 154 323 323 LEU LEU A . n A 1 155 ASN 155 324 324 ASN ASN A . n A 1 156 LEU 156 325 325 LEU LEU A . n A 1 157 HIS 157 326 326 HIS HIS A . n A 1 158 GLU 158 327 327 GLU GLU A . n A 1 159 GLU 159 328 328 GLU GLU A . n A 1 160 GLU 160 329 329 GLU GLU A . n A 1 161 HIS 161 330 330 HIS HIS A . n A 1 162 VAL 162 331 331 VAL VAL A . n A 1 163 LEU 163 332 332 LEU LEU A . n A 1 164 LEU 164 333 333 LEU LEU A . n A 1 165 MET 165 334 334 MET MET A . n A 1 166 ALA 166 335 335 ALA ALA A . n A 1 167 ILE 167 336 336 ILE ILE A . n A 1 168 CYS 168 337 337 CYS CYS A . n A 1 169 ILE 169 338 338 ILE ILE A . n A 1 170 VAL 170 339 339 VAL VAL A . n A 1 171 SER 171 340 340 SER SER A . n A 1 172 PRO 172 341 341 PRO PRO A . n A 1 173 ASP 173 342 342 ASP ASP A . n A 1 174 ARG 174 343 343 ARG ARG A . n A 1 175 PRO 175 344 344 PRO PRO A . n A 1 176 GLY 176 345 345 GLY GLY A . n A 1 177 VAL 177 346 346 VAL VAL A . n A 1 178 GLN 178 347 347 GLN GLN A . n A 1 179 ASP 179 348 348 ASP ASP A . n A 1 180 ALA 180 349 349 ALA ALA A . n A 1 181 ALA 181 350 350 ALA ALA A . n A 1 182 LEU 182 351 351 LEU LEU A . n A 1 183 ILE 183 352 352 ILE ILE A . n A 1 184 GLU 184 353 353 GLU GLU A . n A 1 185 ALA 185 354 354 ALA ALA A . n A 1 186 ILE 186 355 355 ILE ILE A . n A 1 187 GLN 187 356 356 GLN GLN A . n A 1 188 ASP 188 357 357 ASP ASP A . n A 1 189 ARG 189 358 358 ARG ARG A . n A 1 190 LEU 190 359 359 LEU LEU A . n A 1 191 SER 191 360 360 SER SER A . n A 1 192 ASN 192 361 361 ASN ASN A . n A 1 193 THR 193 362 362 THR THR A . n A 1 194 LEU 194 363 363 LEU LEU A . n A 1 195 GLN 195 364 364 GLN GLN A . n A 1 196 THR 196 365 365 THR THR A . n A 1 197 TYR 197 366 366 TYR TYR A . n A 1 198 ILE 198 367 367 ILE ILE A . n A 1 199 ARG 199 368 368 ARG ARG A . n A 1 200 CYS 200 369 369 CYS CYS A . n A 1 201 ARG 201 370 370 ARG ARG A . n A 1 202 HIS 202 371 371 HIS HIS A . n A 1 203 PRO 203 372 372 PRO PRO A . n A 1 204 PRO 204 373 373 PRO PRO A . n A 1 205 PRO 205 374 374 PRO PRO A . n A 1 206 GLY 206 375 375 GLY GLY A . n A 1 207 SER 207 376 376 SER SER A . n A 1 208 HIS 208 377 377 HIS HIS A . n A 1 209 LEU 209 378 378 LEU LEU A . n A 1 210 LEU 210 379 379 LEU LEU A . n A 1 211 TYR 211 380 380 TYR TYR A . n A 1 212 ALA 212 381 381 ALA ALA A . n A 1 213 LYS 213 382 382 LYS LYS A . n A 1 214 MET 214 383 383 MET MET A . n A 1 215 ILE 215 384 384 ILE ILE A . n A 1 216 GLN 216 385 385 GLN GLN A . n A 1 217 LYS 217 386 386 LYS LYS A . n A 1 218 LEU 218 387 387 LEU LEU A . n A 1 219 ALA 219 388 388 ALA ALA A . n A 1 220 ASP 220 389 389 ASP ASP A . n A 1 221 LEU 221 390 390 LEU LEU A . n A 1 222 ARG 222 391 391 ARG ARG A . n A 1 223 SER 223 392 392 SER SER A . n A 1 224 LEU 224 393 393 LEU LEU A . n A 1 225 ASN 225 394 394 ASN ASN A . n A 1 226 GLU 226 395 395 GLU GLU A . n A 1 227 GLU 227 396 396 GLU GLU A . n A 1 228 HIS 228 397 397 HIS HIS A . n A 1 229 SER 229 398 398 SER SER A . n A 1 230 LYS 230 399 399 LYS LYS A . n A 1 231 GLN 231 400 400 GLN GLN A . n A 1 232 TYR 232 401 401 TYR TYR A . n A 1 233 ARG 233 402 402 ARG ARG A . n A 1 234 CYS 234 403 403 CYS CYS A . n A 1 235 LEU 235 404 404 LEU LEU A . n A 1 236 SER 236 405 405 SER SER A . n A 1 237 PHE 237 406 406 PHE PHE A . n A 1 238 GLN 238 407 407 GLN GLN A . n A 1 239 PRO 239 408 408 PRO PRO A . n A 1 240 GLU 240 409 409 GLU GLU A . n A 1 241 CYS 241 410 410 CYS CYS A . n A 1 242 SER 242 411 411 SER SER A . n A 1 243 MET 243 412 412 MET MET A . n A 1 244 LYS 244 413 413 LYS LYS A . n A 1 245 LEU 245 414 414 LEU LEU A . n A 1 246 THR 246 415 415 THR THR A . n A 1 247 PRO 247 416 416 PRO PRO A . n A 1 248 LEU 248 417 417 LEU LEU A . n A 1 249 VAL 249 418 418 VAL VAL A . n A 1 250 LEU 250 419 419 LEU LEU A . n A 1 251 GLU 251 420 420 GLU GLU A . n A 1 252 VAL 252 421 421 VAL VAL A . n A 1 253 PHE 253 422 422 PHE PHE A . n A 1 254 GLY 254 423 423 GLY GLY A . n A 1 255 ASN 255 424 ? ? ? A . n A 1 256 GLU 256 425 ? ? ? A . n A 1 257 GLY 257 426 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 8VM 1 501 1 8VM SX1 A . C 3 HOH 1 601 18 HOH HOH A . C 3 HOH 2 602 69 HOH HOH A . C 3 HOH 3 603 81 HOH HOH A . C 3 HOH 4 604 24 HOH HOH A . C 3 HOH 5 605 1 HOH HOH A . C 3 HOH 6 606 39 HOH HOH A . C 3 HOH 7 607 41 HOH HOH A . C 3 HOH 8 608 95 HOH HOH A . C 3 HOH 9 609 94 HOH HOH A . C 3 HOH 10 610 22 HOH HOH A . C 3 HOH 11 611 85 HOH HOH A . C 3 HOH 12 612 12 HOH HOH A . C 3 HOH 13 613 38 HOH HOH A . C 3 HOH 14 614 83 HOH HOH A . C 3 HOH 15 615 9 HOH HOH A . C 3 HOH 16 616 4 HOH HOH A . C 3 HOH 17 617 26 HOH HOH A . C 3 HOH 18 618 75 HOH HOH A . C 3 HOH 19 619 5 HOH HOH A . C 3 HOH 20 620 17 HOH HOH A . C 3 HOH 21 621 8 HOH HOH A . C 3 HOH 22 622 11 HOH HOH A . C 3 HOH 23 623 6 HOH HOH A . C 3 HOH 24 624 3 HOH HOH A . C 3 HOH 25 625 46 HOH HOH A . C 3 HOH 26 626 15 HOH HOH A . C 3 HOH 27 627 74 HOH HOH A . C 3 HOH 28 628 50 HOH HOH A . C 3 HOH 29 629 35 HOH HOH A . C 3 HOH 30 630 2 HOH HOH A . C 3 HOH 31 631 48 HOH HOH A . C 3 HOH 32 632 16 HOH HOH A . C 3 HOH 33 633 82 HOH HOH A . C 3 HOH 34 634 25 HOH HOH A . C 3 HOH 35 635 76 HOH HOH A . C 3 HOH 36 636 53 HOH HOH A . C 3 HOH 37 637 93 HOH HOH A . C 3 HOH 38 638 59 HOH HOH A . C 3 HOH 39 639 23 HOH HOH A . C 3 HOH 40 640 20 HOH HOH A . C 3 HOH 41 641 92 HOH HOH A . C 3 HOH 42 642 44 HOH HOH A . C 3 HOH 43 643 70 HOH HOH A . C 3 HOH 44 644 51 HOH HOH A . C 3 HOH 45 645 30 HOH HOH A . C 3 HOH 46 646 31 HOH HOH A . C 3 HOH 47 647 14 HOH HOH A . C 3 HOH 48 648 21 HOH HOH A . C 3 HOH 49 649 71 HOH HOH A . C 3 HOH 50 650 78 HOH HOH A . C 3 HOH 51 651 49 HOH HOH A . C 3 HOH 52 652 62 HOH HOH A . C 3 HOH 53 653 90 HOH HOH A . C 3 HOH 54 654 58 HOH HOH A . C 3 HOH 55 655 68 HOH HOH A . C 3 HOH 56 656 40 HOH HOH A . C 3 HOH 57 657 34 HOH HOH A . C 3 HOH 58 658 36 HOH HOH A . C 3 HOH 59 659 47 HOH HOH A . C 3 HOH 60 660 65 HOH HOH A . C 3 HOH 61 661 7 HOH HOH A . C 3 HOH 62 662 66 HOH HOH A . C 3 HOH 63 663 91 HOH HOH A . C 3 HOH 64 664 55 HOH HOH A . C 3 HOH 65 665 61 HOH HOH A . C 3 HOH 66 666 84 HOH HOH A . C 3 HOH 67 667 37 HOH HOH A . C 3 HOH 68 668 77 HOH HOH A . C 3 HOH 69 669 67 HOH HOH A . C 3 HOH 70 670 64 HOH HOH A . C 3 HOH 71 671 79 HOH HOH A . C 3 HOH 72 672 32 HOH HOH A . C 3 HOH 73 673 57 HOH HOH A . C 3 HOH 74 674 10 HOH HOH A . C 3 HOH 75 675 28 HOH HOH A . C 3 HOH 76 676 29 HOH HOH A . C 3 HOH 77 677 19 HOH HOH A . C 3 HOH 78 678 89 HOH HOH A . C 3 HOH 79 679 27 HOH HOH A . C 3 HOH 80 680 42 HOH HOH A . C 3 HOH 81 681 73 HOH HOH A . C 3 HOH 82 682 63 HOH HOH A . C 3 HOH 83 683 33 HOH HOH A . C 3 HOH 84 684 60 HOH HOH A . C 3 HOH 85 685 56 HOH HOH A . C 3 HOH 86 686 43 HOH HOH A . C 3 HOH 87 687 87 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 123 ? CG ? A LYS 5 CG 2 1 Y 1 A LYS 123 ? CD ? A LYS 5 CD 3 1 Y 1 A LYS 123 ? CE ? A LYS 5 CE 4 1 Y 1 A LYS 123 ? NZ ? A LYS 5 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.7 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? MOSFLM ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5V39 _cell.details ? _cell.formula_units_Z ? _cell.length_a 44.000 _cell.length_a_esd ? _cell.length_b 52.670 _cell.length_b_esd ? _cell.length_c 105.880 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5V39 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5V39 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.53 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '100mM Tris HCl pH 8.5, 25% PEG 3350 and 200mM Ammonium Sulfate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-12-01 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength .97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list .97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 21.13 _reflns.entry_id 5V39 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 20.31 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13006 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.56 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 2.71890 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][2] 2.44990 _refine.aniso_B[2][3] 0.00000 _refine.aniso_B[3][3] -5.16880 _refine.B_iso_max ? _refine.B_iso_mean 21.99 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.934 _refine.correlation_coeff_Fo_to_Fc_free 0.877 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5V39 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.20 _refine.ls_d_res_low 20.31 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13006 _refine.ls_number_reflns_R_free 1003 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9 _refine.ls_percent_reflns_R_free 7.710 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_R_free 0.235 _refine.ls_R_factor_R_free_error 0.000 _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.167 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.208 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.211 _refine.pdbx_overall_SU_R_Blow_DPI 0.269 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.250 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 5V39 _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1991 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 2112 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 20.31 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 ? 2071 ? t_bond_d 2.00 HARMONIC 'X-RAY DIFFRACTION' ? 1.00 ? 2809 ? t_angle_deg 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 738 ? t_dihedral_angle_d 2.00 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? ? ? t_incorr_chiral_ct ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_pseud_angle ? ? 'X-RAY DIFFRACTION' ? ? ? 51 ? t_trig_c_planes 2.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 301 ? t_gen_planes 5.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 2071 ? t_it 20.00 HARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_nbd ? ? 'X-RAY DIFFRACTION' ? 2.68 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 16.35 ? ? ? t_other_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_improper_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 269 ? t_chiral_improper_torsion 5.00 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? ? ? t_sum_occupancies ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_distance ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_angle ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? t_utility_torsion ? ? 'X-RAY DIFFRACTION' ? ? ? 2481 ? t_ideal_dist_contact 4.00 SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.38 _refine_ls_shell.number_reflns_all 2629 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 209 _refine_ls_shell.number_reflns_R_work 2420 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free 7.95 _refine_ls_shell.R_factor_all 0.162 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.216 _refine_ls_shell.R_factor_R_free_error 0.000 _refine_ls_shell.R_factor_R_work 0.157 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 7 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5V39 _struct.title 'Crystal structure of human vitamin D receptor ligand binding domain in complex with a VDRM' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5V39 _struct_keywords.text 'VDR, LBD, VDRM, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VDR_HUMAN _struct_ref.pdbx_db_accession P11473 _struct_ref.pdbx_db_isoform P11473-2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SLRPKLSEEQQRIIAILLDAHHKTYDPTYSDFCQFRPPVRVNDGGGSHPSRPNSRHTPSFSGDSSSSCSDHCITSSDMMD SSSFSNLDLSEEDSDDPSVTLELSQLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSEDQIVLLKSSAIEVIMLRSNES FTMDDMSWTCGNQDYKYRVSDVTKAGHSLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAALIEAIQDR LSNTLQTYIRCRHPPPGSHLLYAKMIQKLADLRSLNEEHSKQYRCLSFQPECSMKLTPLVLEVFGNE ; _struct_ref.pdbx_align_begin 169 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5V39 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 256 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P11473 _struct_ref_seq.db_align_beg 169 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 475 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 119 _struct_ref_seq.pdbx_auth_seq_align_end 425 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5V39 ? A ? ? UNP P11473 SER 215 deletion ? 1 1 5V39 ? A ? ? UNP P11473 HIS 216 deletion ? 2 1 5V39 ? A ? ? UNP P11473 PRO 217 deletion ? 3 1 5V39 ? A ? ? UNP P11473 SER 218 deletion ? 4 1 5V39 ? A ? ? UNP P11473 ARG 219 deletion ? 5 1 5V39 ? A ? ? UNP P11473 PRO 220 deletion ? 6 1 5V39 ? A ? ? UNP P11473 ASN 221 deletion ? 7 1 5V39 ? A ? ? UNP P11473 SER 222 deletion ? 8 1 5V39 ? A ? ? UNP P11473 ARG 223 deletion ? 9 1 5V39 ? A ? ? UNP P11473 HIS 224 deletion ? 10 1 5V39 ? A ? ? UNP P11473 THR 225 deletion ? 11 1 5V39 ? A ? ? UNP P11473 PRO 226 deletion ? 12 1 5V39 ? A ? ? UNP P11473 SER 227 deletion ? 13 1 5V39 ? A ? ? UNP P11473 PHE 228 deletion ? 14 1 5V39 ? A ? ? UNP P11473 SER 229 deletion ? 15 1 5V39 ? A ? ? UNP P11473 GLY 230 deletion ? 16 1 5V39 ? A ? ? UNP P11473 ASP 231 deletion ? 17 1 5V39 ? A ? ? UNP P11473 SER 232 deletion ? 18 1 5V39 ? A ? ? UNP P11473 SER 233 deletion ? 19 1 5V39 ? A ? ? UNP P11473 SER 234 deletion ? 20 1 5V39 ? A ? ? UNP P11473 SER 235 deletion ? 21 1 5V39 ? A ? ? UNP P11473 CYS 236 deletion ? 22 1 5V39 ? A ? ? UNP P11473 SER 237 deletion ? 23 1 5V39 ? A ? ? UNP P11473 ASP 238 deletion ? 24 1 5V39 ? A ? ? UNP P11473 HIS 239 deletion ? 25 1 5V39 ? A ? ? UNP P11473 CYS 240 deletion ? 26 1 5V39 ? A ? ? UNP P11473 ILE 241 deletion ? 27 1 5V39 ? A ? ? UNP P11473 THR 242 deletion ? 28 1 5V39 ? A ? ? UNP P11473 SER 243 deletion ? 29 1 5V39 ? A ? ? UNP P11473 SER 244 deletion ? 30 1 5V39 ? A ? ? UNP P11473 ASP 245 deletion ? 31 1 5V39 ? A ? ? UNP P11473 MET 246 deletion ? 32 1 5V39 ? A ? ? UNP P11473 MET 247 deletion ? 33 1 5V39 ? A ? ? UNP P11473 ASP 248 deletion ? 34 1 5V39 ? A ? ? UNP P11473 SER 249 deletion ? 35 1 5V39 ? A ? ? UNP P11473 SER 250 deletion ? 36 1 5V39 ? A ? ? UNP P11473 SER 251 deletion ? 37 1 5V39 ? A ? ? UNP P11473 PHE 252 deletion ? 38 1 5V39 ? A ? ? UNP P11473 SER 253 deletion ? 39 1 5V39 ? A ? ? UNP P11473 ASN 254 deletion ? 40 1 5V39 ? A ? ? UNP P11473 LEU 255 deletion ? 41 1 5V39 ? A ? ? UNP P11473 ASP 256 deletion ? 42 1 5V39 ? A ? ? UNP P11473 LEU 257 deletion ? 43 1 5V39 ? A ? ? UNP P11473 SER 258 deletion ? 44 1 5V39 ? A ? ? UNP P11473 GLU 259 deletion ? 45 1 5V39 ? A ? ? UNP P11473 GLU 260 deletion ? 46 1 5V39 ? A ? ? UNP P11473 ASP 261 deletion ? 47 1 5V39 ? A ? ? UNP P11473 SER 262 deletion ? 48 1 5V39 ? A ? ? UNP P11473 ASP 263 deletion ? 49 1 5V39 ? A ? ? UNP P11473 ASP 264 deletion ? 50 1 5V39 ? A ? ? UNP P11473 PRO 265 deletion ? 51 1 5V39 LEU A 53 ? UNP P11473 SER 272 conflict 222 52 1 5V39 GLY A 257 ? UNP P11473 ? ? 'expression tag' 426 53 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 7 ? TYR A 25 ? SER A 125 TYR A 143 1 ? 19 HELX_P HELX_P2 AA2 ASP A 31 ? PHE A 35 ? ASP A 149 PHE A 153 5 ? 5 HELX_P HELX_P3 AA3 SER A 47 ? LEU A 55 ? SER A 216 LEU A 224 1 ? 9 HELX_P HELX_P4 AA4 MET A 57 ? MET A 78 ? MET A 226 MET A 247 1 ? 22 HELX_P HELX_P5 AA5 GLY A 81 ? LEU A 85 ? GLY A 250 LEU A 254 5 ? 5 HELX_P HELX_P6 AA6 THR A 86 ? ASN A 107 ? THR A 255 ASN A 276 1 ? 22 HELX_P HELX_P7 AA7 ASN A 121 ? ASP A 123 ? ASN A 290 ASP A 292 5 ? 3 HELX_P HELX_P8 AA8 ARG A 127 ? LYS A 133 ? ARG A 296 LYS A 302 1 ? 7 HELX_P HELX_P9 AA9 SER A 137 ? LEU A 154 ? SER A 306 LEU A 323 1 ? 18 HELX_P HELX_P10 AB1 HIS A 157 ? VAL A 170 ? HIS A 326 VAL A 339 1 ? 14 HELX_P HELX_P11 AB2 ASP A 179 ? HIS A 202 ? ASP A 348 HIS A 371 1 ? 24 HELX_P HELX_P12 AB3 LEU A 209 ? SER A 236 ? LEU A 378 SER A 405 1 ? 28 HELX_P HELX_P13 AB4 CYS A 241 ? LEU A 245 ? CYS A 410 LEU A 414 5 ? 5 HELX_P HELX_P14 AB5 THR A 246 ? GLY A 254 ? THR A 415 GLY A 423 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PRO _struct_mon_prot_cis.label_seq_id 204 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PRO _struct_mon_prot_cis.auth_seq_id 373 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 205 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 374 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.10 # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 110 ? THR A 111 ? PHE A 279 THR A 280 AA1 2 SER A 116 ? THR A 118 ? SER A 285 THR A 287 AA1 3 LYS A 125 ? TYR A 126 ? LYS A 294 TYR A 295 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 111 ? N THR A 280 O SER A 116 ? O SER A 285 AA1 2 3 N TRP A 117 ? N TRP A 286 O TYR A 126 ? O TYR A 295 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 8VM _struct_site.pdbx_auth_seq_id 501 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 15 _struct_site.details 'binding site for residue 8VM A 501' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 15 TYR A 25 ? TYR A 143 . ? 1_555 ? 2 AC1 15 ALA A 62 ? ALA A 231 . ? 1_555 ? 3 AC1 15 LEU A 64 ? LEU A 233 . ? 1_555 ? 4 AC1 15 VAL A 65 ? VAL A 234 . ? 1_555 ? 5 AC1 15 SER A 68 ? SER A 237 . ? 1_555 ? 6 AC1 15 ARG A 105 ? ARG A 274 . ? 1_555 ? 7 AC1 15 SER A 106 ? SER A 275 . ? 1_555 ? 8 AC1 15 SER A 109 ? SER A 278 . ? 1_555 ? 9 AC1 15 TRP A 117 ? TRP A 286 . ? 1_555 ? 10 AC1 15 CYS A 119 ? CYS A 288 . ? 1_555 ? 11 AC1 15 TYR A 126 ? TYR A 295 . ? 1_555 ? 12 AC1 15 HIS A 136 ? HIS A 305 . ? 1_555 ? 13 AC1 15 HIS A 228 ? HIS A 397 . ? 1_555 ? 14 AC1 15 HOH C . ? HOH A 621 . ? 1_555 ? 15 AC1 15 HOH C . ? HOH A 625 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 161 ? ? -140.29 26.83 2 1 ASP A 283 ? ? -142.55 15.51 3 1 ASN A 290 ? ? -48.16 153.45 4 1 TYR A 293 ? ? -101.36 40.35 5 1 LEU A 414 ? ? -103.00 -157.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 119 ? A SER 1 2 1 Y 1 A LEU 120 ? A LEU 2 3 1 Y 1 A ARG 121 ? A ARG 3 4 1 Y 1 A ASN 424 ? A ASN 255 5 1 Y 1 A GLU 425 ? A GLU 256 6 1 Y 1 A GLY 426 ? A GLY 257 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8VM C6 C N N 1 8VM C1 C Y N 2 8VM C4 C Y N 3 8VM C3 C Y N 4 8VM C2 C Y N 5 8VM C17 C Y N 6 8VM C18 C Y N 7 8VM C21 C Y N 8 8VM C16 C Y N 9 8VM C20 C Y N 10 8VM C19 C Y N 11 8VM C9 C Y N 12 8VM C22 C N N 13 8VM C14 C N N 14 8VM C32 C N N 15 8VM C34 C N N 16 8VM C28 C N N 17 8VM C29 C N N 18 8VM C30 C N N 19 8VM C31 C N N 20 8VM C33 C N N 21 8VM C24 C N N 22 8VM C25 C N S 23 8VM C15 C N N 24 8VM C27 C N N 25 8VM N10 N Y N 26 8VM N11 N Y N 27 8VM N12 N Y N 28 8VM N13 N Y N 29 8VM N8 N N N 30 8VM O7 O N N 31 8VM O26 O N N 32 8VM O23 O N N 33 8VM S5 S Y N 34 8VM H1 H N N 35 8VM H2 H N N 36 8VM H3 H N N 37 8VM H4 H N N 38 8VM H5 H N N 39 8VM H6 H N N 40 8VM H7 H N N 41 8VM H8 H N N 42 8VM H9 H N N 43 8VM H10 H N N 44 8VM H11 H N N 45 8VM H12 H N N 46 8VM H13 H N N 47 8VM H14 H N N 48 8VM H15 H N N 49 8VM H16 H N N 50 8VM H17 H N N 51 8VM H18 H N N 52 8VM H19 H N N 53 8VM H20 H N N 54 8VM H21 H N N 55 8VM H22 H N N 56 8VM H23 H N N 57 8VM H24 H N N 58 8VM H25 H N N 59 8VM H26 H N N 60 8VM H27 H N N 61 8VM H28 H N N 62 8VM H29 H N N 63 8VM H30 H N N 64 8VM H31 H N N 65 8VM H32 H N N 66 8VM H33 H N N 67 8VM H34 H N N 68 8VM H35 H N N 69 ALA N N N N 70 ALA CA C N S 71 ALA C C N N 72 ALA O O N N 73 ALA CB C N N 74 ALA OXT O N N 75 ALA H H N N 76 ALA H2 H N N 77 ALA HA H N N 78 ALA HB1 H N N 79 ALA HB2 H N N 80 ALA HB3 H N N 81 ALA HXT H N N 82 ARG N N N N 83 ARG CA C N S 84 ARG C C N N 85 ARG O O N N 86 ARG CB C N N 87 ARG CG C N N 88 ARG CD C N N 89 ARG NE N N N 90 ARG CZ C N N 91 ARG NH1 N N N 92 ARG NH2 N N N 93 ARG OXT O N N 94 ARG H H N N 95 ARG H2 H N N 96 ARG HA H N N 97 ARG HB2 H N N 98 ARG HB3 H N N 99 ARG HG2 H N N 100 ARG HG3 H N N 101 ARG HD2 H N N 102 ARG HD3 H N N 103 ARG HE H N N 104 ARG HH11 H N N 105 ARG HH12 H N N 106 ARG HH21 H N N 107 ARG HH22 H N N 108 ARG HXT H N N 109 ASN N N N N 110 ASN CA C N S 111 ASN C C N N 112 ASN O O N N 113 ASN CB C N N 114 ASN CG C N N 115 ASN OD1 O N N 116 ASN ND2 N N N 117 ASN OXT O N N 118 ASN H H N N 119 ASN H2 H N N 120 ASN HA H N N 121 ASN HB2 H N N 122 ASN HB3 H N N 123 ASN HD21 H N N 124 ASN HD22 H N N 125 ASN HXT H N N 126 ASP N N N N 127 ASP CA C N S 128 ASP C C N N 129 ASP O O N N 130 ASP CB C N N 131 ASP CG C N N 132 ASP OD1 O N N 133 ASP OD2 O N N 134 ASP OXT O N N 135 ASP H H N N 136 ASP H2 H N N 137 ASP HA H N N 138 ASP HB2 H N N 139 ASP HB3 H N N 140 ASP HD2 H N N 141 ASP HXT H N N 142 CYS N N N N 143 CYS CA C N R 144 CYS C C N N 145 CYS O O N N 146 CYS CB C N N 147 CYS SG S N N 148 CYS OXT O N N 149 CYS H H N N 150 CYS H2 H N N 151 CYS HA H N N 152 CYS HB2 H N N 153 CYS HB3 H N N 154 CYS HG H N N 155 CYS HXT H N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MET N N N N 299 MET CA C N S 300 MET C C N N 301 MET O O N N 302 MET CB C N N 303 MET CG C N N 304 MET SD S N N 305 MET CE C N N 306 MET OXT O N N 307 MET H H N N 308 MET H2 H N N 309 MET HA H N N 310 MET HB2 H N N 311 MET HB3 H N N 312 MET HG2 H N N 313 MET HG3 H N N 314 MET HE1 H N N 315 MET HE2 H N N 316 MET HE3 H N N 317 MET HXT H N N 318 PHE N N N N 319 PHE CA C N S 320 PHE C C N N 321 PHE O O N N 322 PHE CB C N N 323 PHE CG C Y N 324 PHE CD1 C Y N 325 PHE CD2 C Y N 326 PHE CE1 C Y N 327 PHE CE2 C Y N 328 PHE CZ C Y N 329 PHE OXT O N N 330 PHE H H N N 331 PHE H2 H N N 332 PHE HA H N N 333 PHE HB2 H N N 334 PHE HB3 H N N 335 PHE HD1 H N N 336 PHE HD2 H N N 337 PHE HE1 H N N 338 PHE HE2 H N N 339 PHE HZ H N N 340 PHE HXT H N N 341 PRO N N N N 342 PRO CA C N S 343 PRO C C N N 344 PRO O O N N 345 PRO CB C N N 346 PRO CG C N N 347 PRO CD C N N 348 PRO OXT O N N 349 PRO H H N N 350 PRO HA H N N 351 PRO HB2 H N N 352 PRO HB3 H N N 353 PRO HG2 H N N 354 PRO HG3 H N N 355 PRO HD2 H N N 356 PRO HD3 H N N 357 PRO HXT H N N 358 SER N N N N 359 SER CA C N S 360 SER C C N N 361 SER O O N N 362 SER CB C N N 363 SER OG O N N 364 SER OXT O N N 365 SER H H N N 366 SER H2 H N N 367 SER HA H N N 368 SER HB2 H N N 369 SER HB3 H N N 370 SER HG H N N 371 SER HXT H N N 372 THR N N N N 373 THR CA C N S 374 THR C C N N 375 THR O O N N 376 THR CB C N R 377 THR OG1 O N N 378 THR CG2 C N N 379 THR OXT O N N 380 THR H H N N 381 THR H2 H N N 382 THR HA H N N 383 THR HB H N N 384 THR HG1 H N N 385 THR HG21 H N N 386 THR HG22 H N N 387 THR HG23 H N N 388 THR HXT H N N 389 TRP N N N N 390 TRP CA C N S 391 TRP C C N N 392 TRP O O N N 393 TRP CB C N N 394 TRP CG C Y N 395 TRP CD1 C Y N 396 TRP CD2 C Y N 397 TRP NE1 N Y N 398 TRP CE2 C Y N 399 TRP CE3 C Y N 400 TRP CZ2 C Y N 401 TRP CZ3 C Y N 402 TRP CH2 C Y N 403 TRP OXT O N N 404 TRP H H N N 405 TRP H2 H N N 406 TRP HA H N N 407 TRP HB2 H N N 408 TRP HB3 H N N 409 TRP HD1 H N N 410 TRP HE1 H N N 411 TRP HE3 H N N 412 TRP HZ2 H N N 413 TRP HZ3 H N N 414 TRP HH2 H N N 415 TRP HXT H N N 416 TYR N N N N 417 TYR CA C N S 418 TYR C C N N 419 TYR O O N N 420 TYR CB C N N 421 TYR CG C Y N 422 TYR CD1 C Y N 423 TYR CD2 C Y N 424 TYR CE1 C Y N 425 TYR CE2 C Y N 426 TYR CZ C Y N 427 TYR OH O N N 428 TYR OXT O N N 429 TYR H H N N 430 TYR H2 H N N 431 TYR HA H N N 432 TYR HB2 H N N 433 TYR HB3 H N N 434 TYR HD1 H N N 435 TYR HD2 H N N 436 TYR HE1 H N N 437 TYR HE2 H N N 438 TYR HH H N N 439 TYR HXT H N N 440 VAL N N N N 441 VAL CA C N S 442 VAL C C N N 443 VAL O O N N 444 VAL CB C N N 445 VAL CG1 C N N 446 VAL CG2 C N N 447 VAL OXT O N N 448 VAL H H N N 449 VAL H2 H N N 450 VAL HA H N N 451 VAL HB H N N 452 VAL HG11 H N N 453 VAL HG12 H N N 454 VAL HG13 H N N 455 VAL HG21 H N N 456 VAL HG22 H N N 457 VAL HG23 H N N 458 VAL HXT H N N 459 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8VM C34 C33 sing N N 1 8VM N10 N11 sing Y N 2 8VM N10 C9 sing Y N 3 8VM C30 C27 sing N N 4 8VM N11 N12 doub Y N 5 8VM C22 C20 sing N N 6 8VM O26 C25 sing N N 7 8VM O7 C6 doub N N 8 8VM C33 C15 sing N N 9 8VM C9 N8 sing N N 10 8VM C9 N13 doub Y N 11 8VM N12 N13 sing Y N 12 8VM N8 C6 sing N N 13 8VM C6 C4 sing N N 14 8VM S5 C4 sing Y N 15 8VM S5 C1 sing Y N 16 8VM C25 C27 sing N N 17 8VM C25 C24 sing N N 18 8VM C20 C21 doub Y N 19 8VM C20 C19 sing Y N 20 8VM C21 C16 sing Y N 21 8VM C4 C3 doub Y N 22 8VM C27 C29 sing N N 23 8VM C27 C28 sing N N 24 8VM O23 C19 sing N N 25 8VM O23 C24 sing N N 26 8VM C16 C15 sing N N 27 8VM C16 C17 doub Y N 28 8VM C15 C1 sing N N 29 8VM C15 C31 sing N N 30 8VM C19 C18 doub Y N 31 8VM C1 C2 doub Y N 32 8VM C3 C2 sing Y N 33 8VM C3 C14 sing N N 34 8VM C17 C18 sing Y N 35 8VM C31 C32 sing N N 36 8VM C2 H1 sing N N 37 8VM C17 H2 sing N N 38 8VM C18 H3 sing N N 39 8VM C21 H4 sing N N 40 8VM C22 H5 sing N N 41 8VM C22 H6 sing N N 42 8VM C22 H7 sing N N 43 8VM C14 H8 sing N N 44 8VM C14 H9 sing N N 45 8VM C14 H10 sing N N 46 8VM C32 H11 sing N N 47 8VM C32 H12 sing N N 48 8VM C32 H13 sing N N 49 8VM C34 H14 sing N N 50 8VM C34 H15 sing N N 51 8VM C34 H16 sing N N 52 8VM C28 H17 sing N N 53 8VM C28 H18 sing N N 54 8VM C28 H19 sing N N 55 8VM C29 H20 sing N N 56 8VM C29 H21 sing N N 57 8VM C29 H22 sing N N 58 8VM C30 H23 sing N N 59 8VM C30 H24 sing N N 60 8VM C30 H25 sing N N 61 8VM C31 H26 sing N N 62 8VM C31 H27 sing N N 63 8VM C33 H28 sing N N 64 8VM C33 H29 sing N N 65 8VM C24 H30 sing N N 66 8VM C24 H31 sing N N 67 8VM C25 H32 sing N N 68 8VM N10 H33 sing N N 69 8VM N8 H34 sing N N 70 8VM O26 H35 sing N N 71 ALA N CA sing N N 72 ALA N H sing N N 73 ALA N H2 sing N N 74 ALA CA C sing N N 75 ALA CA CB sing N N 76 ALA CA HA sing N N 77 ALA C O doub N N 78 ALA C OXT sing N N 79 ALA CB HB1 sing N N 80 ALA CB HB2 sing N N 81 ALA CB HB3 sing N N 82 ALA OXT HXT sing N N 83 ARG N CA sing N N 84 ARG N H sing N N 85 ARG N H2 sing N N 86 ARG CA C sing N N 87 ARG CA CB sing N N 88 ARG CA HA sing N N 89 ARG C O doub N N 90 ARG C OXT sing N N 91 ARG CB CG sing N N 92 ARG CB HB2 sing N N 93 ARG CB HB3 sing N N 94 ARG CG CD sing N N 95 ARG CG HG2 sing N N 96 ARG CG HG3 sing N N 97 ARG CD NE sing N N 98 ARG CD HD2 sing N N 99 ARG CD HD3 sing N N 100 ARG NE CZ sing N N 101 ARG NE HE sing N N 102 ARG CZ NH1 sing N N 103 ARG CZ NH2 doub N N 104 ARG NH1 HH11 sing N N 105 ARG NH1 HH12 sing N N 106 ARG NH2 HH21 sing N N 107 ARG NH2 HH22 sing N N 108 ARG OXT HXT sing N N 109 ASN N CA sing N N 110 ASN N H sing N N 111 ASN N H2 sing N N 112 ASN CA C sing N N 113 ASN CA CB sing N N 114 ASN CA HA sing N N 115 ASN C O doub N N 116 ASN C OXT sing N N 117 ASN CB CG sing N N 118 ASN CB HB2 sing N N 119 ASN CB HB3 sing N N 120 ASN CG OD1 doub N N 121 ASN CG ND2 sing N N 122 ASN ND2 HD21 sing N N 123 ASN ND2 HD22 sing N N 124 ASN OXT HXT sing N N 125 ASP N CA sing N N 126 ASP N H sing N N 127 ASP N H2 sing N N 128 ASP CA C sing N N 129 ASP CA CB sing N N 130 ASP CA HA sing N N 131 ASP C O doub N N 132 ASP C OXT sing N N 133 ASP CB CG sing N N 134 ASP CB HB2 sing N N 135 ASP CB HB3 sing N N 136 ASP CG OD1 doub N N 137 ASP CG OD2 sing N N 138 ASP OD2 HD2 sing N N 139 ASP OXT HXT sing N N 140 CYS N CA sing N N 141 CYS N H sing N N 142 CYS N H2 sing N N 143 CYS CA C sing N N 144 CYS CA CB sing N N 145 CYS CA HA sing N N 146 CYS C O doub N N 147 CYS C OXT sing N N 148 CYS CB SG sing N N 149 CYS CB HB2 sing N N 150 CYS CB HB3 sing N N 151 CYS SG HG sing N N 152 CYS OXT HXT sing N N 153 GLN N CA sing N N 154 GLN N H sing N N 155 GLN N H2 sing N N 156 GLN CA C sing N N 157 GLN CA CB sing N N 158 GLN CA HA sing N N 159 GLN C O doub N N 160 GLN C OXT sing N N 161 GLN CB CG sing N N 162 GLN CB HB2 sing N N 163 GLN CB HB3 sing N N 164 GLN CG CD sing N N 165 GLN CG HG2 sing N N 166 GLN CG HG3 sing N N 167 GLN CD OE1 doub N N 168 GLN CD NE2 sing N N 169 GLN NE2 HE21 sing N N 170 GLN NE2 HE22 sing N N 171 GLN OXT HXT sing N N 172 GLU N CA sing N N 173 GLU N H sing N N 174 GLU N H2 sing N N 175 GLU CA C sing N N 176 GLU CA CB sing N N 177 GLU CA HA sing N N 178 GLU C O doub N N 179 GLU C OXT sing N N 180 GLU CB CG sing N N 181 GLU CB HB2 sing N N 182 GLU CB HB3 sing N N 183 GLU CG CD sing N N 184 GLU CG HG2 sing N N 185 GLU CG HG3 sing N N 186 GLU CD OE1 doub N N 187 GLU CD OE2 sing N N 188 GLU OE2 HE2 sing N N 189 GLU OXT HXT sing N N 190 GLY N CA sing N N 191 GLY N H sing N N 192 GLY N H2 sing N N 193 GLY CA C sing N N 194 GLY CA HA2 sing N N 195 GLY CA HA3 sing N N 196 GLY C O doub N N 197 GLY C OXT sing N N 198 GLY OXT HXT sing N N 199 HIS N CA sing N N 200 HIS N H sing N N 201 HIS N H2 sing N N 202 HIS CA C sing N N 203 HIS CA CB sing N N 204 HIS CA HA sing N N 205 HIS C O doub N N 206 HIS C OXT sing N N 207 HIS CB CG sing N N 208 HIS CB HB2 sing N N 209 HIS CB HB3 sing N N 210 HIS CG ND1 sing Y N 211 HIS CG CD2 doub Y N 212 HIS ND1 CE1 doub Y N 213 HIS ND1 HD1 sing N N 214 HIS CD2 NE2 sing Y N 215 HIS CD2 HD2 sing N N 216 HIS CE1 NE2 sing Y N 217 HIS CE1 HE1 sing N N 218 HIS NE2 HE2 sing N N 219 HIS OXT HXT sing N N 220 HOH O H1 sing N N 221 HOH O H2 sing N N 222 ILE N CA sing N N 223 ILE N H sing N N 224 ILE N H2 sing N N 225 ILE CA C sing N N 226 ILE CA CB sing N N 227 ILE CA HA sing N N 228 ILE C O doub N N 229 ILE C OXT sing N N 230 ILE CB CG1 sing N N 231 ILE CB CG2 sing N N 232 ILE CB HB sing N N 233 ILE CG1 CD1 sing N N 234 ILE CG1 HG12 sing N N 235 ILE CG1 HG13 sing N N 236 ILE CG2 HG21 sing N N 237 ILE CG2 HG22 sing N N 238 ILE CG2 HG23 sing N N 239 ILE CD1 HD11 sing N N 240 ILE CD1 HD12 sing N N 241 ILE CD1 HD13 sing N N 242 ILE OXT HXT sing N N 243 LEU N CA sing N N 244 LEU N H sing N N 245 LEU N H2 sing N N 246 LEU CA C sing N N 247 LEU CA CB sing N N 248 LEU CA HA sing N N 249 LEU C O doub N N 250 LEU C OXT sing N N 251 LEU CB CG sing N N 252 LEU CB HB2 sing N N 253 LEU CB HB3 sing N N 254 LEU CG CD1 sing N N 255 LEU CG CD2 sing N N 256 LEU CG HG sing N N 257 LEU CD1 HD11 sing N N 258 LEU CD1 HD12 sing N N 259 LEU CD1 HD13 sing N N 260 LEU CD2 HD21 sing N N 261 LEU CD2 HD22 sing N N 262 LEU CD2 HD23 sing N N 263 LEU OXT HXT sing N N 264 LYS N CA sing N N 265 LYS N H sing N N 266 LYS N H2 sing N N 267 LYS CA C sing N N 268 LYS CA CB sing N N 269 LYS CA HA sing N N 270 LYS C O doub N N 271 LYS C OXT sing N N 272 LYS CB CG sing N N 273 LYS CB HB2 sing N N 274 LYS CB HB3 sing N N 275 LYS CG CD sing N N 276 LYS CG HG2 sing N N 277 LYS CG HG3 sing N N 278 LYS CD CE sing N N 279 LYS CD HD2 sing N N 280 LYS CD HD3 sing N N 281 LYS CE NZ sing N N 282 LYS CE HE2 sing N N 283 LYS CE HE3 sing N N 284 LYS NZ HZ1 sing N N 285 LYS NZ HZ2 sing N N 286 LYS NZ HZ3 sing N N 287 LYS OXT HXT sing N N 288 MET N CA sing N N 289 MET N H sing N N 290 MET N H2 sing N N 291 MET CA C sing N N 292 MET CA CB sing N N 293 MET CA HA sing N N 294 MET C O doub N N 295 MET C OXT sing N N 296 MET CB CG sing N N 297 MET CB HB2 sing N N 298 MET CB HB3 sing N N 299 MET CG SD sing N N 300 MET CG HG2 sing N N 301 MET CG HG3 sing N N 302 MET SD CE sing N N 303 MET CE HE1 sing N N 304 MET CE HE2 sing N N 305 MET CE HE3 sing N N 306 MET OXT HXT sing N N 307 PHE N CA sing N N 308 PHE N H sing N N 309 PHE N H2 sing N N 310 PHE CA C sing N N 311 PHE CA CB sing N N 312 PHE CA HA sing N N 313 PHE C O doub N N 314 PHE C OXT sing N N 315 PHE CB CG sing N N 316 PHE CB HB2 sing N N 317 PHE CB HB3 sing N N 318 PHE CG CD1 doub Y N 319 PHE CG CD2 sing Y N 320 PHE CD1 CE1 sing Y N 321 PHE CD1 HD1 sing N N 322 PHE CD2 CE2 doub Y N 323 PHE CD2 HD2 sing N N 324 PHE CE1 CZ doub Y N 325 PHE CE1 HE1 sing N N 326 PHE CE2 CZ sing Y N 327 PHE CE2 HE2 sing N N 328 PHE CZ HZ sing N N 329 PHE OXT HXT sing N N 330 PRO N CA sing N N 331 PRO N CD sing N N 332 PRO N H sing N N 333 PRO CA C sing N N 334 PRO CA CB sing N N 335 PRO CA HA sing N N 336 PRO C O doub N N 337 PRO C OXT sing N N 338 PRO CB CG sing N N 339 PRO CB HB2 sing N N 340 PRO CB HB3 sing N N 341 PRO CG CD sing N N 342 PRO CG HG2 sing N N 343 PRO CG HG3 sing N N 344 PRO CD HD2 sing N N 345 PRO CD HD3 sing N N 346 PRO OXT HXT sing N N 347 SER N CA sing N N 348 SER N H sing N N 349 SER N H2 sing N N 350 SER CA C sing N N 351 SER CA CB sing N N 352 SER CA HA sing N N 353 SER C O doub N N 354 SER C OXT sing N N 355 SER CB OG sing N N 356 SER CB HB2 sing N N 357 SER CB HB3 sing N N 358 SER OG HG sing N N 359 SER OXT HXT sing N N 360 THR N CA sing N N 361 THR N H sing N N 362 THR N H2 sing N N 363 THR CA C sing N N 364 THR CA CB sing N N 365 THR CA HA sing N N 366 THR C O doub N N 367 THR C OXT sing N N 368 THR CB OG1 sing N N 369 THR CB CG2 sing N N 370 THR CB HB sing N N 371 THR OG1 HG1 sing N N 372 THR CG2 HG21 sing N N 373 THR CG2 HG22 sing N N 374 THR CG2 HG23 sing N N 375 THR OXT HXT sing N N 376 TRP N CA sing N N 377 TRP N H sing N N 378 TRP N H2 sing N N 379 TRP CA C sing N N 380 TRP CA CB sing N N 381 TRP CA HA sing N N 382 TRP C O doub N N 383 TRP C OXT sing N N 384 TRP CB CG sing N N 385 TRP CB HB2 sing N N 386 TRP CB HB3 sing N N 387 TRP CG CD1 doub Y N 388 TRP CG CD2 sing Y N 389 TRP CD1 NE1 sing Y N 390 TRP CD1 HD1 sing N N 391 TRP CD2 CE2 doub Y N 392 TRP CD2 CE3 sing Y N 393 TRP NE1 CE2 sing Y N 394 TRP NE1 HE1 sing N N 395 TRP CE2 CZ2 sing Y N 396 TRP CE3 CZ3 doub Y N 397 TRP CE3 HE3 sing N N 398 TRP CZ2 CH2 doub Y N 399 TRP CZ2 HZ2 sing N N 400 TRP CZ3 CH2 sing Y N 401 TRP CZ3 HZ3 sing N N 402 TRP CH2 HH2 sing N N 403 TRP OXT HXT sing N N 404 TYR N CA sing N N 405 TYR N H sing N N 406 TYR N H2 sing N N 407 TYR CA C sing N N 408 TYR CA CB sing N N 409 TYR CA HA sing N N 410 TYR C O doub N N 411 TYR C OXT sing N N 412 TYR CB CG sing N N 413 TYR CB HB2 sing N N 414 TYR CB HB3 sing N N 415 TYR CG CD1 doub Y N 416 TYR CG CD2 sing Y N 417 TYR CD1 CE1 sing Y N 418 TYR CD1 HD1 sing N N 419 TYR CD2 CE2 doub Y N 420 TYR CD2 HD2 sing N N 421 TYR CE1 CZ doub Y N 422 TYR CE1 HE1 sing N N 423 TYR CE2 CZ sing Y N 424 TYR CE2 HE2 sing N N 425 TYR CZ OH sing N N 426 TYR OH HH sing N N 427 TYR OXT HXT sing N N 428 VAL N CA sing N N 429 VAL N H sing N N 430 VAL N H2 sing N N 431 VAL CA C sing N N 432 VAL CA CB sing N N 433 VAL CA HA sing N N 434 VAL C O doub N N 435 VAL C OXT sing N N 436 VAL CB CG1 sing N N 437 VAL CB CG2 sing N N 438 VAL CB HB sing N N 439 VAL CG1 HG11 sing N N 440 VAL CG1 HG12 sing N N 441 VAL CG1 HG13 sing N N 442 VAL CG2 HG21 sing N N 443 VAL CG2 HG22 sing N N 444 VAL CG2 HG23 sing N N 445 VAL OXT HXT sing N N 446 # _atom_sites.entry_id 5V39 _atom_sites.fract_transf_matrix[1][1] 0.022727 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018986 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009445 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_