HEADER TOXIN 08-MAR-17 5V3S TITLE CRYSTAL STRUCTURE OF IP-1A FROM ALCALIGENES FAECALIS AT 1.8A TITLE 2 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWO-COMPONENT INSECTICIDAL PROTEIN 16 KDA UNIT; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALCALIGENES FAECALIS; SOURCE 3 ORGANISM_TAXID: 511; SOURCE 4 GENE: IP-1A; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS INSECTICIDAL TOXIN, AEGEROLYSIN, TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR N.YALPANI,D.ALTIER,R.GUAN,G.MONTELIONE REVDAT 2 21-JUN-17 5V3S 1 JRNL REVDAT 1 14-JUN-17 5V3S 0 JRNL AUTH N.YALPANI,D.ALTIER,J.BARRY,A.KASSA,T.M.NOWATZKI,A.SETHI, JRNL AUTH 2 J.Z.ZHAO,S.DIEHN,V.CRANE,G.SANDAHL,R.GUAN,B.POLAND, JRNL AUTH 3 C.PEREZ ORTEGA,M.E.NELSON,W.XIE,L.LIU,G.WU JRNL TITL AN ALCALIGENES STRAIN EMULATES BACILLUS THURINGIENSIS JRNL TITL 2 PRODUCING A BINARY PROTEIN THAT KILLS CORN ROOTWORM THROUGH JRNL TITL 3 A MECHANISM SIMILAR TO CRY34AB1/CRY35AB1. JRNL REF SCI REP V. 7 3063 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28596570 JRNL DOI 10.1038/S41598-017-03544-9 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 24912 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.219 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1339 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1646 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.3260 REMARK 3 BIN FREE R VALUE SET COUNT : 84 REMARK 3 BIN FREE R VALUE : 0.3910 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2253 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 267 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.165 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.159 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.313 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2315 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2097 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3126 ; 1.899 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4866 ; 0.877 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 286 ; 7.248 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;35.036 ;25.046 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 383 ;14.035 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;11.864 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 321 ; 0.122 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2643 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 535 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1144 ; 2.294 ; 2.186 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1143 ; 2.294 ; 2.183 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1427 ; 3.506 ; 3.263 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1428 ; 3.506 ; 3.267 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1171 ; 2.757 ; 2.437 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1169 ; 2.755 ; 2.430 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1698 ; 4.052 ; 3.551 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2821 ; 6.861 ;19.097 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2689 ; 6.704 ;18.600 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5V3S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226837. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JAN-13 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97869 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26255 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: CRANK REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.13 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, PH=7.0 10% PEG 1000 0.1M REMARK 280 SODIUM MALONATE, PH 7.0, MICROBATCH, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 17.20950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 THR A 2 REMARK 465 ALA A 3 REMARK 465 LYS A 4 REMARK 465 ASP A 5 REMARK 465 ILE A 6 REMARK 465 ALA A 7 REMARK 465 THR A 8 REMARK 465 MSE B 1 REMARK 465 THR B 2 REMARK 465 ALA B 3 REMARK 465 LYS B 4 REMARK 465 ASP B 5 REMARK 465 ILE B 6 REMARK 465 ALA B 7 REMARK 465 THR B 8 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 HIS B 152 REMARK 465 HIS B 153 REMARK 465 HIS B 154 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 21 O HOH A 201 2.04 REMARK 500 OE1 GLU B 21 O HOH B 201 2.15 REMARK 500 O HOH B 213 O HOH B 254 2.16 REMARK 500 OE1 GLU A 34 O HOH A 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 343 O HOH A 350 2646 2.14 REMARK 500 O HOH A 205 O HOH A 224 2746 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 98 CD GLU A 98 OE2 -0.066 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 39 NE - CZ - NH2 ANGL. DEV. = -3.0 DEGREES REMARK 500 ASP A 65 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 ASP B 65 CB - CG - OD1 ANGL. DEV. = 5.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 9.89 82.11 REMARK 500 ALA A 79 -85.14 -163.83 REMARK 500 SER A 81 72.25 -64.88 REMARK 500 GLU B 10 -2.40 -147.63 REMARK 500 ASP B 65 127.66 -37.50 REMARK 500 ALA B 79 -56.38 -152.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 10 SER B 11 148.25 REMARK 500 REMARK 500 REMARK: NULL DBREF1 5V3S A 1 146 UNP A0A0U4HUZ5_ALCFA DBREF2 5V3S A A0A0U4HUZ5 1 146 DBREF1 5V3S B 1 146 UNP A0A0U4HUZ5_ALCFA DBREF2 5V3S B A0A0U4HUZ5 1 146 SEQADV 5V3S MSE A 20 UNP A0A0U4HUZ ILE 20 CONFLICT SEQADV 5V3S MSE A 135 UNP A0A0U4HUZ THR 135 CONFLICT SEQADV 5V3S LEU A 147 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S GLU A 148 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 149 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 150 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 151 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 152 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 153 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS A 154 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S MSE B 20 UNP A0A0U4HUZ ILE 20 CONFLICT SEQADV 5V3S MSE B 135 UNP A0A0U4HUZ THR 135 CONFLICT SEQADV 5V3S LEU B 147 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S GLU B 148 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 149 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 150 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 151 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 152 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 153 UNP A0A0U4HUZ EXPRESSION TAG SEQADV 5V3S HIS B 154 UNP A0A0U4HUZ EXPRESSION TAG SEQRES 1 A 154 MSE THR ALA LYS ASP ILE ALA THR GLU GLU SER LYS ILE SEQRES 2 A 154 ARG ALA TYR ALA GLN TRP MSE GLU ILE THR ILE PHE VAL SEQRES 3 A 154 VAL ASN SER ASN PHE LYS VAL GLU GLY ALA TYR LEU ARG SEQRES 4 A 154 TRP GLY LYS PHE HIS VAL PRO GLY ASP LYS ASP LYS GLU SEQRES 5 A 154 ILE SER PRO SER GLN ILE ASN GLY THR ILE ILE LYS ASP SEQRES 6 A 154 GLU ASP SER TYR THR ILE ALA SER CYS GLY ARG GLU ASN SEQRES 7 A 154 ALA SER SER GLY THR GLU GLY GLY PHE SER LEU TYR ASP SEQRES 8 A 154 GLY ASP LYS LEU VAL PHE GLU TYR TYR TRP ASP CYS PRO SEQRES 9 A 154 TRP SER GLY SER ASN SER ASP GLU LEU THR VAL LYS ASP SEQRES 10 A 154 LYS GLU ASN TYR THR VAL ILE LYS LYS GLY GLY GLY SER SEQRES 11 A 154 PRO SER GLY ALA MSE GLY ASN ILE PHE ILE THR VAL VAL SEQRES 12 A 154 LYS LYS SER LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 154 MSE THR ALA LYS ASP ILE ALA THR GLU GLU SER LYS ILE SEQRES 2 B 154 ARG ALA TYR ALA GLN TRP MSE GLU ILE THR ILE PHE VAL SEQRES 3 B 154 VAL ASN SER ASN PHE LYS VAL GLU GLY ALA TYR LEU ARG SEQRES 4 B 154 TRP GLY LYS PHE HIS VAL PRO GLY ASP LYS ASP LYS GLU SEQRES 5 B 154 ILE SER PRO SER GLN ILE ASN GLY THR ILE ILE LYS ASP SEQRES 6 B 154 GLU ASP SER TYR THR ILE ALA SER CYS GLY ARG GLU ASN SEQRES 7 B 154 ALA SER SER GLY THR GLU GLY GLY PHE SER LEU TYR ASP SEQRES 8 B 154 GLY ASP LYS LEU VAL PHE GLU TYR TYR TRP ASP CYS PRO SEQRES 9 B 154 TRP SER GLY SER ASN SER ASP GLU LEU THR VAL LYS ASP SEQRES 10 B 154 LYS GLU ASN TYR THR VAL ILE LYS LYS GLY GLY GLY SER SEQRES 11 B 154 PRO SER GLY ALA MSE GLY ASN ILE PHE ILE THR VAL VAL SEQRES 12 B 154 LYS LYS SER LEU GLU HIS HIS HIS HIS HIS HIS HET MSE A 20 8 HET MSE A 135 8 HET MSE B 20 8 HET MSE B 135 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 3 HOH *267(H2 O) HELIX 1 AA1 GLU A 9 ALA A 17 1 9 HELIX 2 AA2 SER A 54 ASN A 59 1 6 HELIX 3 AA3 SER A 146 HIS A 151 1 6 HELIX 4 AA4 GLU B 10 ALA B 17 1 8 HELIX 5 AA5 SER B 54 ASN B 59 1 6 SHEET 1 AA1 6 GLU A 52 ILE A 53 0 SHEET 2 AA1 6 LYS A 42 HIS A 44 -1 N PHE A 43 O ILE A 53 SHEET 3 AA1 6 SER A 68 CYS A 74 -1 O CYS A 74 N LYS A 42 SHEET 4 AA1 6 TRP A 19 VAL A 27 -1 N ILE A 22 O ILE A 71 SHEET 5 AA1 6 GLY A 136 LYS A 144 1 O ILE A 140 N THR A 23 SHEET 6 AA1 6 TYR A 121 LYS A 126 -1 N THR A 122 O VAL A 143 SHEET 1 AA2 5 ILE A 62 ILE A 63 0 SHEET 2 AA2 5 PHE A 31 TRP A 40 -1 N PHE A 31 O ILE A 63 SHEET 3 AA2 5 THR A 83 ASP A 91 -1 O GLU A 84 N ARG A 39 SHEET 4 AA2 5 LYS A 94 CYS A 103 -1 O CYS A 103 N THR A 83 SHEET 5 AA2 5 SER A 110 VAL A 115 -1 O THR A 114 N GLU A 98 SHEET 1 AA3 6 ASP B 48 ILE B 53 0 SHEET 2 AA3 6 LYS B 42 VAL B 45 -1 N VAL B 45 O ASP B 48 SHEET 3 AA3 6 SER B 68 CYS B 74 -1 O CYS B 74 N LYS B 42 SHEET 4 AA3 6 TRP B 19 VAL B 27 -1 N ILE B 22 O ILE B 71 SHEET 5 AA3 6 GLY B 136 LYS B 144 1 O GLY B 136 N TRP B 19 SHEET 6 AA3 6 TYR B 121 LYS B 126 -1 N THR B 122 O VAL B 143 SHEET 1 AA4 5 ILE B 62 ILE B 63 0 SHEET 2 AA4 5 PHE B 31 TRP B 40 -1 N PHE B 31 O ILE B 63 SHEET 3 AA4 5 THR B 83 ASP B 91 -1 O SER B 88 N GLU B 34 SHEET 4 AA4 5 LYS B 94 TRP B 105 -1 O TRP B 101 N GLY B 85 SHEET 5 AA4 5 SER B 108 VAL B 115 -1 O THR B 114 N GLU B 98 LINK C TRP A 19 N MSE A 20 1555 1555 1.32 LINK C MSE A 20 N GLU A 21 1555 1555 1.33 LINK C ALA A 134 N MSE A 135 1555 1555 1.32 LINK C MSE A 135 N GLY A 136 1555 1555 1.31 LINK C TRP B 19 N MSE B 20 1555 1555 1.33 LINK C MSE B 20 N GLU B 21 1555 1555 1.32 LINK C ALA B 134 N MSE B 135 1555 1555 1.34 LINK C MSE B 135 N GLY B 136 1555 1555 1.32 CRYST1 59.288 34.419 71.436 90.00 96.54 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016867 0.000000 0.001935 0.00000 SCALE2 0.000000 0.029054 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014090 0.00000