HEADER OXYGEN TRANSPORT 08-MAR-17 5V3V TITLE CRYSTAL STRUCTURE OF THE GROUP II TRUNCATED HEMOGLOBIN FROM BACILLUS TITLE 2 ANTHRACIS: TYR26ALA MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLOBIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GROUP 2 TRUNCATED HEMOGLOBIN YJBI,PROTOZOAN/CYANOBACTERIAL COMPND 5 GLOBIN FAMILY PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: YJBI, GBAA_1209, BASH2_04647, BVB96_06425; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TRUNCATED HEMOGLOBIN, OXYGEN TRANSPORT, HEME PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.L.VARNADO,E.SORELLE,J.SOMAN,J.S.OLSON REVDAT 3 06-MAR-24 5V3V 1 REMARK REVDAT 2 22-NOV-17 5V3V 1 REMARK REVDAT 1 12-APR-17 5V3V 0 JRNL AUTH C.L.VARNADO,E.SORELLE,J.SOMAN,J.S.OLSON JRNL TITL CRYSTAL STRUCTURE OF THE GROUP II TRUNCATED HEMOGLOBIN FROM JRNL TITL 2 BACILLUS ANTHRACIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.14 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.14 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.450 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 3 NUMBER OF REFLECTIONS : 17117 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.8544 - 4.8970 0.83 1266 142 0.1855 0.2008 REMARK 3 2 4.8970 - 3.8875 0.89 1298 144 0.1646 0.1609 REMARK 3 3 3.8875 - 3.3963 0.92 1325 146 0.1808 0.1880 REMARK 3 4 3.3963 - 3.0859 0.90 1280 143 0.2111 0.2648 REMARK 3 5 3.0859 - 2.8647 0.90 1290 143 0.2454 0.3079 REMARK 3 6 2.8647 - 2.6958 0.90 1285 143 0.2455 0.2354 REMARK 3 7 2.6958 - 2.5608 0.90 1280 142 0.2469 0.2508 REMARK 3 8 2.5608 - 2.4494 0.92 1281 143 0.2436 0.3029 REMARK 3 9 2.4494 - 2.3551 0.92 1283 142 0.2475 0.3131 REMARK 3 10 2.3551 - 2.2738 0.92 1302 144 0.2704 0.2858 REMARK 3 11 2.2738 - 2.2027 0.91 1306 145 0.2660 0.2637 REMARK 3 12 2.2027 - 2.1398 0.86 1209 135 0.2758 0.3180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2197 REMARK 3 ANGLE : 1.007 3012 REMARK 3 CHIRALITY : 0.045 304 REMARK 3 PLANARITY : 0.007 385 REMARK 3 DIHEDRAL : 15.760 1267 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V3V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226846. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : PH 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RUH3R REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : D*TREK 9.9.8.9 W9RSSI REMARK 200 DATA SCALING SOFTWARE : D*TREK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17139 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.140 REMARK 200 RESOLUTION RANGE LOW (A) : 45.844 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.3 REMARK 200 DATA REDUNDANCY : 2.150 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.23 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.09 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5 M AMMONIUM SULPHATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.74700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.74700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 24.72450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 61.15150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 24.72450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 61.15150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.74700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 24.72450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 61.15150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.74700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 24.72450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 61.15150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -96.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -218.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -201.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 122.30300 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 1.000000 0.000000 0.000000 -24.72450 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 61.15150 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 -24.72450 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 61.15150 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -205.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 49.44900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 55.74700 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 314 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 355 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 314 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 326 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 362 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 465 GLN B 4 REMARK 465 GLU B 128 REMARK 465 THR B 129 REMARK 465 GLY B 130 REMARK 465 GLU B 131 REMARK 465 ILE B 132 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 347 O HOH B 359 1.87 REMARK 500 O HOH A 303 O HOH A 361 1.91 REMARK 500 O HOH B 350 O HOH B 355 2.06 REMARK 500 O HOH B 354 O HOH B 356 2.08 REMARK 500 FE HEM B 201 C CYN B 202 2.08 REMARK 500 O SER A 30 O HOH A 301 2.12 REMARK 500 FE HEM A 201 C CYN A 202 2.12 REMARK 500 NH2 ARG A 76 O HOH A 302 2.13 REMARK 500 O HOH A 340 O HOH A 368 2.13 REMARK 500 O HOH B 312 O HOH B 339 2.14 REMARK 500 O HOH A 308 O HOH A 312 2.14 REMARK 500 O HOH A 357 O HOH A 368 2.16 REMARK 500 OE1 GLN B 96 O HOH B 301 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 333 O HOH B 352 3655 1.97 REMARK 500 O HOH A 336 O HOH A 353 3655 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET B 72 53.43 38.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 77 NE2 REMARK 620 2 HEM A 201 NA 84.1 REMARK 620 3 HEM A 201 NB 91.2 90.4 REMARK 620 4 HEM A 201 NC 90.7 174.7 89.2 REMARK 620 5 HEM A 201 ND 84.6 91.9 175.0 88.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 201 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 77 NE2 REMARK 620 2 HEM B 201 NA 86.3 REMARK 620 3 HEM B 201 NB 86.8 89.5 REMARK 620 4 HEM B 201 NC 85.3 171.6 90.9 REMARK 620 5 HEM B 201 ND 87.5 89.7 174.2 89.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CYN A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CYN B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V3U RELATED DB: PDB REMARK 900 RELATED ID: 5V3T RELATED DB: PDB DBREF 5V3V A 1 132 UNP Q81TQ7 Q81TQ7_BACAN 1 132 DBREF 5V3V B 1 132 UNP Q81TQ7 Q81TQ7_BACAN 1 132 SEQADV 5V3V ALA A 26 UNP Q81TQ7 TYR 26 ENGINEERED MUTATION SEQADV 5V3V ALA B 26 UNP Q81TQ7 TYR 26 ENGINEERED MUTATION SEQRES 1 A 132 MET SER LYS GLN PRO MET THR PRO PHE GLU ALA ILE GLY SEQRES 2 A 132 GLY GLU GLN CYS ILE GLU ILE LEU VAL ASP THR PHE ALA SEQRES 3 A 132 SER TYR VAL SER LYS HIS PRO ASP LEU SER PRO ILE PHE SEQRES 4 A 132 PRO ASP ASP LEU THR GLU THR ALA ARG LYS GLN LYS GLN SEQRES 5 A 132 PHE LEU THR GLN TYR LEU GLY GLY PRO ASN LEU TYR THR SEQRES 6 A 132 GLU GLU HIS GLY HIS PRO MET LEU ARG ALA ARG HIS LEU SEQRES 7 A 132 PRO PHE GLU ILE THR PRO LYS ARG ALA GLU ALA TRP LEU SEQRES 8 A 132 SER CYS MET GLU GLN ALA MET ASP ASP THR GLY VAL HIS SEQRES 9 A 132 GLY HIS ILE ARG GLU PHE VAL PHE GLU ARG LEU ALA LEU SEQRES 10 A 132 THR ALA GLN HIS MET VAL ASN THR PRO ASN GLU THR GLY SEQRES 11 A 132 GLU ILE SEQRES 1 B 132 MET SER LYS GLN PRO MET THR PRO PHE GLU ALA ILE GLY SEQRES 2 B 132 GLY GLU GLN CYS ILE GLU ILE LEU VAL ASP THR PHE ALA SEQRES 3 B 132 SER TYR VAL SER LYS HIS PRO ASP LEU SER PRO ILE PHE SEQRES 4 B 132 PRO ASP ASP LEU THR GLU THR ALA ARG LYS GLN LYS GLN SEQRES 5 B 132 PHE LEU THR GLN TYR LEU GLY GLY PRO ASN LEU TYR THR SEQRES 6 B 132 GLU GLU HIS GLY HIS PRO MET LEU ARG ALA ARG HIS LEU SEQRES 7 B 132 PRO PHE GLU ILE THR PRO LYS ARG ALA GLU ALA TRP LEU SEQRES 8 B 132 SER CYS MET GLU GLN ALA MET ASP ASP THR GLY VAL HIS SEQRES 9 B 132 GLY HIS ILE ARG GLU PHE VAL PHE GLU ARG LEU ALA LEU SEQRES 10 B 132 THR ALA GLN HIS MET VAL ASN THR PRO ASN GLU THR GLY SEQRES 11 B 132 GLU ILE HET HEM A 201 43 HET CYN A 202 2 HET SO4 A 203 5 HET SO4 A 204 5 HET HEM B 201 43 HET CYN B 202 2 HET SO4 B 203 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM CYN CYANIDE ION HETNAM SO4 SULFATE ION HETSYN HEM HEME FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 CYN 2(C N 1-) FORMUL 5 SO4 3(O4 S 2-) FORMUL 10 HOH *135(H2 O) HELIX 1 AA1 THR A 7 ILE A 12 1 6 HELIX 2 AA2 GLY A 13 HIS A 32 1 20 HELIX 3 AA3 LEU A 35 PHE A 39 5 5 HELIX 4 AA4 LEU A 43 LEU A 58 1 16 HELIX 5 AA5 ASN A 62 GLY A 69 1 8 HELIX 6 AA6 MET A 72 HIS A 77 1 6 HELIX 7 AA7 THR A 83 GLY A 102 1 20 HELIX 8 AA8 HIS A 104 VAL A 123 1 20 HELIX 9 AA9 THR B 7 GLY B 13 1 7 HELIX 10 AB1 GLY B 13 HIS B 32 1 20 HELIX 11 AB2 LEU B 43 LEU B 58 1 16 HELIX 12 AB3 ASN B 62 GLY B 69 1 8 HELIX 13 AB4 MET B 72 LEU B 78 1 7 HELIX 14 AB5 THR B 83 GLY B 102 1 20 HELIX 15 AB6 HIS B 104 VAL B 123 1 20 LINK NE2 HIS A 77 FE HEM A 201 1555 1555 2.05 LINK NE2 HIS B 77 FE HEM B 201 1555 1555 2.01 CISPEP 1 PRO B 5 MET B 6 0 -0.48 SITE 1 AC1 21 ILE A 38 PHE A 39 THR A 46 LYS A 49 SITE 2 AC1 21 PHE A 53 TYR A 64 LEU A 73 ARG A 76 SITE 3 AC1 21 HIS A 77 PHE A 80 ILE A 82 ALA A 87 SITE 4 AC1 21 TRP A 90 LEU A 115 ALA A 119 MET A 122 SITE 5 AC1 21 CYN A 202 HOH A 302 HOH A 305 HOH A 322 SITE 6 AC1 21 ARG B 114 SITE 1 AC2 3 GLN A 50 TRP A 90 HEM A 201 SITE 1 AC3 5 HIS A 68 HOH A 326 HIS B 106 ARG B 114 SITE 2 AC3 5 HOH B 304 SITE 1 AC4 5 HIS A 104 GLY A 105 HIS A 106 HOH A 310 SITE 2 AC4 5 HOH A 323 SITE 1 AC5 13 ILE B 38 PHE B 39 THR B 46 LYS B 49 SITE 2 AC5 13 PHE B 53 TYR B 64 HIS B 77 PHE B 80 SITE 3 AC5 13 ILE B 82 TRP B 90 ALA B 119 CYN B 202 SITE 4 AC5 13 HOH B 324 SITE 1 AC6 4 PHE B 39 GLN B 50 TRP B 90 HEM B 201 SITE 1 AC7 7 GLN A 56 THR A 65 HIS A 70 PRO A 71 SITE 2 AC7 7 HIS B 104 GLY B 105 HOH B 319 CRYST1 49.449 122.303 111.494 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020223 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008969 0.00000