HEADER TRANSFERASE/TRANSFERASE INHIBITOR 08-MAR-17 5V41 TITLE CRYSTAL STRUCTURE OF MTB PKS13 THIOESTERASE DOMAIN IN COMPLEX WITH TITLE 2 INHIBITOR TAM5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYKETIDE SYNTHASE PKS13 (TERMINATION POLYKETIDE COMPND 3 SYNTHASE); COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: THIOESTERASE DOMAIN (UNP RESIDUES 113-395); COMPND 6 EC: 2.7.7.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: PKS, ERS027654_02263; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS THIOESTERASE DOMAIN, TAM5 COMPLEX, PKS13, MYCOBACTERIUM, POLYKETIDE KEYWDS 2 SYNTHASE, MYCOLIC ACID CONDENSATION, TB STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, TBSGC, ALPHA/BETA HYDROLASE, THIOESTERASE, TRANSFERASE- KEYWDS 4 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.AGGARWAL,J.C.SACCHETTINI REVDAT 4 04-OCT-23 5V41 1 REMARK REVDAT 3 26-JUL-17 5V41 1 JRNL REVDAT 2 19-JUL-17 5V41 1 JRNL REVDAT 1 05-JUL-17 5V41 0 JRNL AUTH A.AGGARWAL,M.K.PARAI,N.SHETTY,D.WALLIS,L.WOOLHISER, JRNL AUTH 2 C.HASTINGS,N.K.DUTTA,S.GALAVIZ,R.C.DHAKAL,R.SHRESTHA, JRNL AUTH 3 S.WAKABAYASHI,C.WALPOLE,D.MATTHEWS,D.FLOYD,P.SCULLION, JRNL AUTH 4 J.RILEY,O.EPEMOLU,S.NORVAL,T.SNAVELY,G.T.ROBERTSON, JRNL AUTH 5 E.J.RUBIN,T.R.IOERGER,F.A.SIRGEL,R.VAN DER MERWE, JRNL AUTH 6 P.D.VAN HELDEN,P.KELLER,E.C.BOTTGER,P.C.KARAKOUSIS, JRNL AUTH 7 A.J.LENAERTS,J.C.SACCHETTINI JRNL TITL DEVELOPMENT OF A NOVEL LEAD THAT TARGETS M. TUBERCULOSIS JRNL TITL 2 POLYKETIDE SYNTHASE 13. JRNL REF CELL V. 170 249 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 28669536 JRNL DOI 10.1016/J.CELL.2017.06.025 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.20 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.7 REMARK 3 NUMBER OF REFLECTIONS : 33653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1702 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2118 - 4.6943 0.98 2957 169 0.1753 0.1878 REMARK 3 2 4.6943 - 3.7264 0.98 2815 176 0.1607 0.1924 REMARK 3 3 3.7264 - 3.2555 0.86 2486 124 0.1825 0.2499 REMARK 3 4 3.2555 - 2.9579 1.00 2819 165 0.2059 0.2550 REMARK 3 5 2.9579 - 2.7459 1.00 2833 143 0.2187 0.2754 REMARK 3 6 2.7459 - 2.5840 1.00 2829 142 0.2226 0.2777 REMARK 3 7 2.5840 - 2.4546 1.00 2845 130 0.2120 0.2754 REMARK 3 8 2.4546 - 2.3478 1.00 2797 139 0.2201 0.2501 REMARK 3 9 2.3478 - 2.2574 0.82 2314 132 0.2457 0.3323 REMARK 3 10 2.2574 - 2.1795 0.70 1964 98 0.3547 0.3828 REMARK 3 11 2.1795 - 2.1113 0.99 2744 152 0.2412 0.2846 REMARK 3 12 2.1113 - 2.0510 0.91 2548 132 0.2787 0.3483 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 4259 REMARK 3 ANGLE : 0.882 5791 REMARK 3 CHIRALITY : 0.034 626 REMARK 3 PLANARITY : 0.004 768 REMARK 3 DIHEDRAL : 13.764 1546 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 11 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1453 THROUGH 1548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8589 28.9284 24.5159 REMARK 3 T TENSOR REMARK 3 T11: 0.1701 T22: 0.1582 REMARK 3 T33: 0.1181 T12: -0.0043 REMARK 3 T13: -0.0214 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 1.4305 L22: 1.4546 REMARK 3 L33: 3.0511 L12: -0.1286 REMARK 3 L13: -0.5719 L23: -0.3445 REMARK 3 S TENSOR REMARK 3 S11: 0.0273 S12: -0.0635 S13: -0.0274 REMARK 3 S21: 0.1939 S22: 0.0197 S23: -0.0051 REMARK 3 S31: 0.2480 S32: -0.0455 S33: -0.0228 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1549 THROUGH 1571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1298 38.5573 19.0168 REMARK 3 T TENSOR REMARK 3 T11: 0.2431 T22: 0.1811 REMARK 3 T33: 0.2494 T12: 0.0079 REMARK 3 T13: -0.0019 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 1.6652 L22: 1.2547 REMARK 3 L33: 0.7813 L12: 0.2318 REMARK 3 L13: -0.6626 L23: 0.1648 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: 0.0102 S13: 0.3128 REMARK 3 S21: 0.0459 S22: 0.0846 S23: 0.1421 REMARK 3 S31: -0.0038 S32: -0.0139 S33: -0.0756 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1572 THROUGH 1590 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3137 25.7036 3.1395 REMARK 3 T TENSOR REMARK 3 T11: 0.2351 T22: 0.2773 REMARK 3 T33: 0.3334 T12: 0.0151 REMARK 3 T13: -0.0394 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 3.5650 L22: 4.1169 REMARK 3 L33: 4.9399 L12: -0.4591 REMARK 3 L13: -0.6507 L23: 1.3844 REMARK 3 S TENSOR REMARK 3 S11: -0.0584 S12: 0.1596 S13: 0.2072 REMARK 3 S21: -0.2525 S22: 0.1008 S23: 0.1519 REMARK 3 S31: 0.0372 S32: 0.2147 S33: 0.0079 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1591 THROUGH 1626 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8744 17.3619 10.3710 REMARK 3 T TENSOR REMARK 3 T11: 0.3667 T22: 0.3736 REMARK 3 T33: 0.5167 T12: -0.0631 REMARK 3 T13: 0.0069 T23: -0.0684 REMARK 3 L TENSOR REMARK 3 L11: 0.9740 L22: 1.2671 REMARK 3 L33: 0.6663 L12: -0.4791 REMARK 3 L13: -0.7287 L23: 0.3349 REMARK 3 S TENSOR REMARK 3 S11: -0.0748 S12: 0.0509 S13: -0.4162 REMARK 3 S21: -0.2675 S22: -0.0102 S23: 0.2891 REMARK 3 S31: 0.0286 S32: -0.0226 S33: 0.1128 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1627 THROUGH 1644 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9784 21.1090 12.3710 REMARK 3 T TENSOR REMARK 3 T11: 0.2034 T22: 0.2334 REMARK 3 T33: 0.2729 T12: -0.0278 REMARK 3 T13: -0.0344 T23: -0.0342 REMARK 3 L TENSOR REMARK 3 L11: 1.5011 L22: 5.9180 REMARK 3 L33: 1.4019 L12: -0.5289 REMARK 3 L13: -0.2336 L23: 0.8935 REMARK 3 S TENSOR REMARK 3 S11: 0.0261 S12: 0.1172 S13: -0.3090 REMARK 3 S21: 0.2266 S22: -0.1837 S23: 0.0964 REMARK 3 S31: 0.1565 S32: -0.0066 S33: 0.1400 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1645 THROUGH 1689 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8690 39.8856 11.6979 REMARK 3 T TENSOR REMARK 3 T11: 0.1512 T22: 0.2037 REMARK 3 T33: 0.2187 T12: 0.0313 REMARK 3 T13: 0.0064 T23: 0.0007 REMARK 3 L TENSOR REMARK 3 L11: 2.5089 L22: 1.9638 REMARK 3 L33: 1.9868 L12: 0.5666 REMARK 3 L13: 1.5066 L23: -1.0671 REMARK 3 S TENSOR REMARK 3 S11: -0.0934 S12: 0.1384 S13: 0.3249 REMARK 3 S21: -0.0881 S22: 0.0014 S23: 0.1675 REMARK 3 S31: -0.1305 S32: -0.0832 S33: 0.0680 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1690 THROUGH 1706 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.0656 36.4559 7.2401 REMARK 3 T TENSOR REMARK 3 T11: 0.2525 T22: 0.2418 REMARK 3 T33: 0.1946 T12: 0.0124 REMARK 3 T13: 0.0030 T23: 0.0363 REMARK 3 L TENSOR REMARK 3 L11: 2.4792 L22: 2.0188 REMARK 3 L33: 1.0451 L12: -1.0736 REMARK 3 L13: -0.8488 L23: -0.4264 REMARK 3 S TENSOR REMARK 3 S11: -0.0233 S12: 0.2930 S13: 0.0329 REMARK 3 S21: -0.2258 S22: -0.0159 S23: -0.1679 REMARK 3 S31: 0.2546 S32: 0.0868 S33: 0.0503 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1707 THROUGH 1727 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7770 39.9980 19.4557 REMARK 3 T TENSOR REMARK 3 T11: 0.2025 T22: 0.1968 REMARK 3 T33: 0.2681 T12: -0.0322 REMARK 3 T13: -0.0367 T23: 0.0332 REMARK 3 L TENSOR REMARK 3 L11: 2.8372 L22: 2.5439 REMARK 3 L33: 3.7964 L12: 0.6944 REMARK 3 L13: 1.5035 L23: 0.8755 REMARK 3 S TENSOR REMARK 3 S11: -0.1527 S12: 0.0357 S13: 0.3848 REMARK 3 S21: 0.0449 S22: -0.0617 S23: 0.0107 REMARK 3 S31: -0.5234 S32: 0.4768 S33: 0.2304 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1452 THROUGH 1571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2584 66.8620 5.3890 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.1651 REMARK 3 T33: 0.2209 T12: 0.0030 REMARK 3 T13: 0.0089 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.5569 L22: 2.4156 REMARK 3 L33: 2.3199 L12: -0.2585 REMARK 3 L13: -0.5055 L23: -0.0991 REMARK 3 S TENSOR REMARK 3 S11: 0.0002 S12: 0.0338 S13: 0.1967 REMARK 3 S21: -0.0839 S22: 0.0426 S23: -0.3202 REMARK 3 S31: -0.0636 S32: 0.2169 S33: -0.0376 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1572 THROUGH 1644 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.4802 70.4401 -14.7547 REMARK 3 T TENSOR REMARK 3 T11: 0.3287 T22: 0.3449 REMARK 3 T33: 0.3484 T12: -0.1205 REMARK 3 T13: -0.0569 T23: 0.0899 REMARK 3 L TENSOR REMARK 3 L11: 1.6307 L22: 2.1577 REMARK 3 L33: 2.4519 L12: -0.2074 REMARK 3 L13: 0.9132 L23: 0.6730 REMARK 3 S TENSOR REMARK 3 S11: 0.0844 S12: 0.1152 S13: -0.1374 REMARK 3 S21: -0.2388 S22: 0.2413 S23: 0.4415 REMARK 3 S31: 0.4887 S32: -0.5217 S33: -0.2284 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1645 THROUGH 1726 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9754 56.4346 7.5987 REMARK 3 T TENSOR REMARK 3 T11: 0.2604 T22: 0.1776 REMARK 3 T33: 0.2185 T12: 0.0360 REMARK 3 T13: 0.0183 T23: 0.0154 REMARK 3 L TENSOR REMARK 3 L11: 1.5566 L22: 2.9180 REMARK 3 L33: 2.1718 L12: 0.7269 REMARK 3 L13: 0.3994 L23: -0.0503 REMARK 3 S TENSOR REMARK 3 S11: 0.0815 S12: 0.0598 S13: -0.1189 REMARK 3 S21: -0.1600 S22: 0.0821 S23: 0.0715 REMARK 3 S31: 0.2595 S32: 0.0019 S33: -0.1254 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2366 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0075 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33859 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.15000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.98100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 5V3W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, 2.0-1.8 M AMMONIUM REMARK 280 SULFATE, 2%-5% V/V PPG P400, PH 8.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 44.45300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.86250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.45300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.86250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1448 REMARK 465 ASN A 1449 REMARK 465 ALA A 1450 REMARK 465 GLN A 1451 REMARK 465 ILE A 1452 REMARK 465 THR A 1593 REMARK 465 ILE A 1594 REMARK 465 GLY A 1622 REMARK 465 SER A 1728 REMARK 465 GLU A 1729 REMARK 465 VAL A 1730 REMARK 465 GLY A 1731 REMARK 465 LYS A 1732 REMARK 465 GLN A 1733 REMARK 465 SER B 1448 REMARK 465 ASN B 1449 REMARK 465 ALA B 1450 REMARK 465 GLN B 1451 REMARK 465 PHE B 1590 REMARK 465 ASN B 1591 REMARK 465 VAL B 1592 REMARK 465 THR B 1727 REMARK 465 SER B 1728 REMARK 465 GLU B 1729 REMARK 465 VAL B 1730 REMARK 465 GLY B 1731 REMARK 465 LYS B 1732 REMARK 465 GLN B 1733 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A1453 CG OD1 OD2 REMARK 470 GLU A1464 CG CD OE1 OE2 REMARK 470 GLU A1567 CG CD OE1 OE2 REMARK 470 ASN A1591 CG OD1 ND2 REMARK 470 VAL A1592 CG1 CG2 REMARK 470 GLU A1600 CG CD OE1 OE2 REMARK 470 GLU A1604 CG CD OE1 OE2 REMARK 470 GLN A1620 CG CD OE1 NE2 REMARK 470 SER A1621 OG REMARK 470 VAL A1623 CG1 CG2 REMARK 470 GLN A1624 CG CD OE1 NE2 REMARK 470 THR A1727 OG1 CG2 REMARK 470 ASP B1453 CG OD1 OD2 REMARK 470 GLU B1464 CG CD OE1 OE2 REMARK 470 ASP B1524 CG OD1 OD2 REMARK 470 GLU B1566 CG CD OE1 OE2 REMARK 470 GLU B1567 CG CD OE1 OE2 REMARK 470 LYS B1572 CG CD CE NZ REMARK 470 GLU B1573 CG CD OE1 OE2 REMARK 470 ARG B1576 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1577 CG CD CE NZ REMARK 470 TYR B1582 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 PHE B1585 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B1588 CG CD CE NZ REMARK 470 THR B1593 OG1 CG2 REMARK 470 ILE B1594 CG1 CG2 CD1 REMARK 470 ILE B1597 CG1 CG2 CD1 REMARK 470 TYR B1599 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B1600 CG CD OE1 OE2 REMARK 470 GLN B1624 CG CD OE1 NE2 REMARK 470 GLN B1647 CG CD OE1 NE2 REMARK 470 GLN B1649 CG CD OE1 NE2 REMARK 470 ASP B1652 CG OD1 OD2 REMARK 470 MET B1669 CG SD CE REMARK 470 PHE B1670 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B1685 CG CD OE1 OE2 REMARK 470 ASP B1725 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1533 -131.67 60.44 REMARK 500 GLN A1570 66.67 -101.81 REMARK 500 GLN A1620 97.44 -65.04 REMARK 500 SER B1533 -126.40 57.50 REMARK 500 GLN B1570 67.48 -100.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1924 DISTANCE = 6.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue J24 A 1801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V3W RELATED DB: PDB REMARK 900 RELATED ID: 5V3X RELATED DB: PDB REMARK 900 RELATED ID: 5V3Y RELATED DB: PDB REMARK 900 RELATED ID: 5V3Z RELATED DB: PDB REMARK 900 RELATED ID: 5V40 RELATED DB: PDB REMARK 900 RELATED ID: 5V42 RELATED DB: PDB DBREF1 5V41 A 1451 1733 UNP A0A0T9CRX1_MYCTX DBREF2 5V41 A A0A0T9CRX1 113 395 DBREF1 5V41 B 1451 1733 UNP A0A0T9CRX1_MYCTX DBREF2 5V41 B A0A0T9CRX1 113 395 SEQADV 5V41 SER A 1448 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V41 ASN A 1449 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V41 ALA A 1450 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V41 SER B 1448 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V41 ASN B 1449 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V41 ALA B 1450 UNP A0A0T9CRX EXPRESSION TAG SEQRES 1 A 286 SER ASN ALA GLN ILE ASP GLY PHE VAL ARG THR LEU ARG SEQRES 2 A 286 ALA ARG PRO GLU ALA GLY GLY LYS VAL PRO VAL PHE VAL SEQRES 3 A 286 PHE HIS PRO ALA GLY GLY SER THR VAL VAL TYR GLU PRO SEQRES 4 A 286 LEU LEU GLY ARG LEU PRO ALA ASP THR PRO MET TYR GLY SEQRES 5 A 286 PHE GLU ARG VAL GLU GLY SER ILE GLU GLU ARG ALA GLN SEQRES 6 A 286 GLN TYR VAL PRO LYS LEU ILE GLU MET GLN GLY ASP GLY SEQRES 7 A 286 PRO TYR VAL LEU VAL GLY TRP SER LEU GLY GLY VAL LEU SEQRES 8 A 286 ALA TYR ALA CYS ALA ILE GLY LEU ARG ARG LEU GLY LYS SEQRES 9 A 286 ASP VAL ARG PHE VAL GLY LEU ILE ASP ALA VAL ARG ALA SEQRES 10 A 286 GLY GLU GLU ILE PRO GLN THR LYS GLU GLU ILE ARG LYS SEQRES 11 A 286 ARG TRP ASP ARG TYR ALA ALA PHE ALA GLU LYS THR PHE SEQRES 12 A 286 ASN VAL THR ILE PRO ALA ILE PRO TYR GLU GLN LEU GLU SEQRES 13 A 286 GLU LEU ASP ASP GLU GLY GLN VAL ARG PHE VAL LEU ASP SEQRES 14 A 286 ALA VAL SER GLN SER GLY VAL GLN ILE PRO ALA GLY ILE SEQRES 15 A 286 ILE GLU HIS GLN ARG THR SER TYR LEU ASP ASN ARG ALA SEQRES 16 A 286 ILE ASP THR ALA GLN ILE GLN PRO TYR ASP GLY HIS VAL SEQRES 17 A 286 THR LEU TYR MET ALA ASP ARG TYR HIS ASP ASP ALA ILE SEQRES 18 A 286 MET PHE GLU PRO ARG TYR ALA VAL ARG GLN PRO ASP GLY SEQRES 19 A 286 GLY TRP GLY GLU TYR VAL SER ASP LEU GLU VAL VAL PRO SEQRES 20 A 286 ILE GLY GLY GLU HIS ILE GLN ALA ILE ASP GLU PRO ILE SEQRES 21 A 286 ILE ALA LYS VAL GLY GLU HIS MET SER ARG ALA LEU GLY SEQRES 22 A 286 GLN ILE GLU ALA ASP ARG THR SER GLU VAL GLY LYS GLN SEQRES 1 B 286 SER ASN ALA GLN ILE ASP GLY PHE VAL ARG THR LEU ARG SEQRES 2 B 286 ALA ARG PRO GLU ALA GLY GLY LYS VAL PRO VAL PHE VAL SEQRES 3 B 286 PHE HIS PRO ALA GLY GLY SER THR VAL VAL TYR GLU PRO SEQRES 4 B 286 LEU LEU GLY ARG LEU PRO ALA ASP THR PRO MET TYR GLY SEQRES 5 B 286 PHE GLU ARG VAL GLU GLY SER ILE GLU GLU ARG ALA GLN SEQRES 6 B 286 GLN TYR VAL PRO LYS LEU ILE GLU MET GLN GLY ASP GLY SEQRES 7 B 286 PRO TYR VAL LEU VAL GLY TRP SER LEU GLY GLY VAL LEU SEQRES 8 B 286 ALA TYR ALA CYS ALA ILE GLY LEU ARG ARG LEU GLY LYS SEQRES 9 B 286 ASP VAL ARG PHE VAL GLY LEU ILE ASP ALA VAL ARG ALA SEQRES 10 B 286 GLY GLU GLU ILE PRO GLN THR LYS GLU GLU ILE ARG LYS SEQRES 11 B 286 ARG TRP ASP ARG TYR ALA ALA PHE ALA GLU LYS THR PHE SEQRES 12 B 286 ASN VAL THR ILE PRO ALA ILE PRO TYR GLU GLN LEU GLU SEQRES 13 B 286 GLU LEU ASP ASP GLU GLY GLN VAL ARG PHE VAL LEU ASP SEQRES 14 B 286 ALA VAL SER GLN SER GLY VAL GLN ILE PRO ALA GLY ILE SEQRES 15 B 286 ILE GLU HIS GLN ARG THR SER TYR LEU ASP ASN ARG ALA SEQRES 16 B 286 ILE ASP THR ALA GLN ILE GLN PRO TYR ASP GLY HIS VAL SEQRES 17 B 286 THR LEU TYR MET ALA ASP ARG TYR HIS ASP ASP ALA ILE SEQRES 18 B 286 MET PHE GLU PRO ARG TYR ALA VAL ARG GLN PRO ASP GLY SEQRES 19 B 286 GLY TRP GLY GLU TYR VAL SER ASP LEU GLU VAL VAL PRO SEQRES 20 B 286 ILE GLY GLY GLU HIS ILE GLN ALA ILE ASP GLU PRO ILE SEQRES 21 B 286 ILE ALA LYS VAL GLY GLU HIS MET SER ARG ALA LEU GLY SEQRES 22 B 286 GLN ILE GLU ALA ASP ARG THR SER GLU VAL GLY LYS GLN HET J24 A1801 28 HETNAM J24 ETHYL 5-HYDROXY-4-(MORPHOLIN-4-YLMETHYL)-2-PHENYL-1- HETNAM 2 J24 BENZOFURAN-3-CARBOXYLATE FORMUL 3 J24 C22 H23 N O5 FORMUL 4 HOH *301(H2 O) HELIX 1 AA1 SER A 1480 VAL A 1483 5 4 HELIX 2 AA2 TYR A 1484 ARG A 1490 1 7 HELIX 3 AA3 SER A 1506 GLY A 1523 1 18 HELIX 4 AA4 SER A 1533 LEU A 1549 1 17 HELIX 5 AA5 THR A 1571 ASN A 1591 1 21 HELIX 6 AA6 PRO A 1598 LEU A 1605 1 8 HELIX 7 AA7 ASP A 1606 GLN A 1620 1 15 HELIX 8 AA8 PRO A 1626 THR A 1645 1 20 HELIX 9 AA9 HIS A 1664 GLU A 1671 1 8 HELIX 10 AB1 PRO A 1672 VAL A 1676 5 5 HELIX 11 AB2 GLU A 1698 ALA A 1702 5 5 HELIX 12 AB3 PRO A 1706 THR A 1727 1 22 HELIX 13 AB4 SER B 1480 VAL B 1483 5 4 HELIX 14 AB5 TYR B 1484 GLY B 1489 1 6 HELIX 15 AB6 SER B 1506 GLY B 1523 1 18 HELIX 16 AB7 SER B 1533 LEU B 1549 1 17 HELIX 17 AB8 THR B 1571 THR B 1589 1 19 HELIX 18 AB9 PRO B 1598 GLU B 1603 1 6 HELIX 19 AC1 ASP B 1606 GLY B 1622 1 17 HELIX 20 AC2 PRO B 1626 THR B 1645 1 20 HELIX 21 AC3 HIS B 1664 GLU B 1671 1 8 HELIX 22 AC4 PRO B 1672 VAL B 1676 5 5 HELIX 23 AC5 GLU B 1698 ALA B 1702 5 5 HELIX 24 AC6 PRO B 1706 ARG B 1726 1 21 SHEET 1 AA1 7 VAL A1456 ARG A1460 0 SHEET 2 AA1 7 MET A1497 PHE A1500 -1 O GLY A1499 N ARG A1457 SHEET 3 AA1 7 VAL A1471 PHE A1474 1 N VAL A1473 O PHE A1500 SHEET 4 AA1 7 TYR A1527 TRP A1532 1 O VAL A1530 N PHE A1472 SHEET 5 AA1 7 VAL A1553 ILE A1559 1 O GLY A1557 N LEU A1529 SHEET 6 AA1 7 VAL A1655 MET A1659 1 O THR A1656 N VAL A1556 SHEET 7 AA1 7 LEU A1690 PRO A1694 1 O VAL A1693 N LEU A1657 SHEET 1 AA2 7 VAL B1456 ARG B1460 0 SHEET 2 AA2 7 MET B1497 PHE B1500 -1 O GLY B1499 N ARG B1457 SHEET 3 AA2 7 VAL B1471 PHE B1474 1 N VAL B1473 O PHE B1500 SHEET 4 AA2 7 TYR B1527 TRP B1532 1 O VAL B1528 N PHE B1472 SHEET 5 AA2 7 VAL B1553 ILE B1559 1 O GLY B1557 N LEU B1529 SHEET 6 AA2 7 VAL B1655 MET B1659 1 O THR B1656 N LEU B1558 SHEET 7 AA2 7 LEU B1690 PRO B1694 1 O GLU B1691 N LEU B1657 CISPEP 1 GLY A 1525 PRO A 1526 0 3.96 CISPEP 2 GLU A 1705 PRO A 1706 0 0.76 CISPEP 3 GLY B 1525 PRO B 1526 0 5.11 CISPEP 4 GLU B 1705 PRO B 1706 0 0.84 SITE 1 AC1 12 TYR A1582 SER A1636 TYR A1637 ASN A1640 SITE 2 AC1 12 ILE A1643 ASP A1644 TYR A1663 ASP A1666 SITE 3 AC1 12 ALA A1667 PHE A1670 GLU A1671 TYR A1674 CRYST1 88.906 109.725 57.359 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011248 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009114 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017434 0.00000