HEADER TRANSFERASE/TRANSFERASE INHIBITOR 08-MAR-17 5V42 TITLE CRYSTAL STRUCTURE OF MTB PKS13 THIOESTERASE DOMAIN IN COMPLEX WITH TITLE 2 INHIBITOR TAM3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYKETIDE SYNTHASE PKS13 (TERMINATION POLYKETIDE COMPND 3 SYNTHASE); COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: THIOESTERASE DOMAIN (UNP RESIDUES 113-395); COMPND 6 EC: 2.7.7.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: PKS, ERS027654_02263; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS THIOESTERASE DOMAIN, TAM3 COMPLEX, PKS13, MYCOBACTERIUM, POLYKETIDE KEYWDS 2 SYNTHASE, MYCOLIC ACID CONDENSATION, TB STRUCTURAL GENOMICS KEYWDS 3 CONSORTIUM, TBSGC, ALPHA/BETA HYDROLASE, THIOESTERASE, TRANSFERASE- KEYWDS 4 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.AGGARWAL,J.C.SACCHETTINI REVDAT 4 04-OCT-23 5V42 1 REMARK REVDAT 3 26-JUL-17 5V42 1 JRNL REVDAT 2 19-JUL-17 5V42 1 JRNL REVDAT 1 05-JUL-17 5V42 0 JRNL AUTH A.AGGARWAL,M.K.PARAI,N.SHETTY,D.WALLIS,L.WOOLHISER, JRNL AUTH 2 C.HASTINGS,N.K.DUTTA,S.GALAVIZ,R.C.DHAKAL,R.SHRESTHA, JRNL AUTH 3 S.WAKABAYASHI,C.WALPOLE,D.MATTHEWS,D.FLOYD,P.SCULLION, JRNL AUTH 4 J.RILEY,O.EPEMOLU,S.NORVAL,T.SNAVELY,G.T.ROBERTSON, JRNL AUTH 5 E.J.RUBIN,T.R.IOERGER,F.A.SIRGEL,R.VAN DER MERWE, JRNL AUTH 6 P.D.VAN HELDEN,P.KELLER,E.C.BOTTGER,P.C.KARAKOUSIS, JRNL AUTH 7 A.J.LENAERTS,J.C.SACCHETTINI JRNL TITL DEVELOPMENT OF A NOVEL LEAD THAT TARGETS M. TUBERCULOSIS JRNL TITL 2 POLYKETIDE SYNTHASE 13. JRNL REF CELL V. 170 249 2017 JRNL REFN ISSN 1097-4172 JRNL PMID 28669536 JRNL DOI 10.1016/J.CELL.2017.06.025 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 87.9 REMARK 3 NUMBER OF REFLECTIONS : 34440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7682 - 4.5454 0.87 2890 142 0.1687 0.1820 REMARK 3 2 4.5454 - 3.6091 0.84 2459 137 0.1548 0.1663 REMARK 3 3 3.6091 - 3.1533 0.88 2687 144 0.1732 0.2396 REMARK 3 4 3.1533 - 2.8652 0.92 2853 166 0.2003 0.2462 REMARK 3 5 2.8652 - 2.6599 0.93 2917 131 0.2037 0.2787 REMARK 3 6 2.6599 - 2.5031 0.94 2887 143 0.2027 0.2269 REMARK 3 7 2.5031 - 2.3778 0.94 2881 150 0.2034 0.2961 REMARK 3 8 2.3778 - 2.2743 0.94 2892 160 0.2246 0.2946 REMARK 3 9 2.2743 - 2.1868 0.68 2081 109 0.3422 0.3844 REMARK 3 10 2.1868 - 2.1113 0.93 2822 153 0.2557 0.2831 REMARK 3 11 2.1113 - 2.0453 0.92 2842 136 0.2744 0.3320 REMARK 3 12 2.0453 - 1.9869 0.83 2511 147 0.2973 0.3339 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4267 REMARK 3 ANGLE : 1.119 5802 REMARK 3 CHIRALITY : 0.048 618 REMARK 3 PLANARITY : 0.006 769 REMARK 3 DIHEDRAL : 13.455 1551 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1454 THROUGH 1549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7879 29.1981 24.5643 REMARK 3 T TENSOR REMARK 3 T11: 0.3074 T22: 0.2667 REMARK 3 T33: 0.2651 T12: 0.0115 REMARK 3 T13: -0.0103 T23: 0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.3205 L22: 1.3161 REMARK 3 L33: 2.6122 L12: 0.1854 REMARK 3 L13: -0.3673 L23: -0.3315 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.1065 S13: -0.0714 REMARK 3 S21: 0.0977 S22: 0.0595 S23: 0.0586 REMARK 3 S31: 0.1430 S32: -0.0625 S33: -0.0605 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1550 THROUGH 1571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9812 38.5251 17.9480 REMARK 3 T TENSOR REMARK 3 T11: 0.2918 T22: 0.2804 REMARK 3 T33: 0.3519 T12: 0.0203 REMARK 3 T13: 0.0268 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 0.8503 L22: 1.1371 REMARK 3 L33: 1.3736 L12: 0.3993 REMARK 3 L13: -0.9173 L23: -0.4940 REMARK 3 S TENSOR REMARK 3 S11: 0.0952 S12: 0.0948 S13: 0.1581 REMARK 3 S21: -0.0160 S22: 0.1833 S23: 0.2200 REMARK 3 S31: -0.0674 S32: 0.0030 S33: -0.1326 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1572 THROUGH 1590 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.3393 25.5927 3.4288 REMARK 3 T TENSOR REMARK 3 T11: 0.3791 T22: 0.4202 REMARK 3 T33: 0.4838 T12: -0.0103 REMARK 3 T13: -0.0483 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.9064 L22: 2.9633 REMARK 3 L33: 3.7034 L12: -0.1279 REMARK 3 L13: -0.2714 L23: 1.5903 REMARK 3 S TENSOR REMARK 3 S11: -0.1662 S12: 0.3619 S13: -0.0629 REMARK 3 S21: -0.2780 S22: -0.1372 S23: 0.2901 REMARK 3 S31: -0.3155 S32: 0.3070 S33: 0.0807 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1591 THROUGH 1664 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.2309 26.1435 12.3750 REMARK 3 T TENSOR REMARK 3 T11: 0.3479 T22: 0.3592 REMARK 3 T33: 0.3100 T12: -0.0149 REMARK 3 T13: 0.0151 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 2.3827 L22: 1.6606 REMARK 3 L33: 0.8988 L12: 0.3007 REMARK 3 L13: 0.5522 L23: 0.1243 REMARK 3 S TENSOR REMARK 3 S11: 0.0785 S12: 0.0856 S13: -0.2372 REMARK 3 S21: 0.0373 S22: -0.0767 S23: 0.1248 REMARK 3 S31: 0.1592 S32: -0.1515 S33: 0.0014 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1665 THROUGH 1689 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5893 39.6734 8.8943 REMARK 3 T TENSOR REMARK 3 T11: 0.2225 T22: 0.3240 REMARK 3 T33: 0.2971 T12: 0.0294 REMARK 3 T13: 0.0256 T23: 0.0400 REMARK 3 L TENSOR REMARK 3 L11: 2.3660 L22: 2.0818 REMARK 3 L33: 2.4325 L12: 0.9004 REMARK 3 L13: 1.4779 L23: -0.6751 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: 0.2024 S13: 0.1429 REMARK 3 S21: -0.0848 S22: -0.0413 S23: 0.1504 REMARK 3 S31: -0.0958 S32: -0.3549 S33: -0.0449 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1690 THROUGH 1727 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4652 38.5006 14.0591 REMARK 3 T TENSOR REMARK 3 T11: 0.2908 T22: 0.2891 REMARK 3 T33: 0.3126 T12: -0.0098 REMARK 3 T13: 0.0125 T23: 0.0229 REMARK 3 L TENSOR REMARK 3 L11: 1.9980 L22: 1.4765 REMARK 3 L33: 0.8093 L12: -0.3630 REMARK 3 L13: -0.1929 L23: -1.0031 REMARK 3 S TENSOR REMARK 3 S11: -0.0319 S12: 0.1748 S13: 0.3419 REMARK 3 S21: -0.0019 S22: -0.1033 S23: -0.2326 REMARK 3 S31: -0.0632 S32: 0.2716 S33: 0.0979 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1451 THROUGH 1571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9579 66.6177 4.8092 REMARK 3 T TENSOR REMARK 3 T11: 0.2792 T22: 0.2647 REMARK 3 T33: 0.3455 T12: 0.0000 REMARK 3 T13: 0.0222 T23: 0.0129 REMARK 3 L TENSOR REMARK 3 L11: 1.8791 L22: 2.5814 REMARK 3 L33: 2.1516 L12: -0.0156 REMARK 3 L13: 0.0399 L23: 0.5044 REMARK 3 S TENSOR REMARK 3 S11: 0.0252 S12: 0.0846 S13: 0.1852 REMARK 3 S21: -0.0961 S22: 0.0399 S23: -0.4367 REMARK 3 S31: -0.0407 S32: 0.1191 S33: -0.0371 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1572 THROUGH 1626 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2473 70.0025 -17.2452 REMARK 3 T TENSOR REMARK 3 T11: 0.4180 T22: 0.4748 REMARK 3 T33: 0.4014 T12: -0.0965 REMARK 3 T13: -0.0308 T23: 0.1046 REMARK 3 L TENSOR REMARK 3 L11: 1.4112 L22: 2.6758 REMARK 3 L33: 1.3211 L12: 0.1272 REMARK 3 L13: 1.3772 L23: 0.2779 REMARK 3 S TENSOR REMARK 3 S11: -0.1923 S12: -0.1133 S13: -0.0257 REMARK 3 S21: -0.3825 S22: 0.4317 S23: 0.3276 REMARK 3 S31: -0.0373 S32: -0.2530 S33: -0.1125 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1627 THROUGH 1689 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4817 59.0789 -1.8592 REMARK 3 T TENSOR REMARK 3 T11: 0.3317 T22: 0.3056 REMARK 3 T33: 0.3761 T12: -0.0293 REMARK 3 T13: 0.0141 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.8428 L22: 1.7559 REMARK 3 L33: 1.9430 L12: 0.0624 REMARK 3 L13: 0.6091 L23: -1.2042 REMARK 3 S TENSOR REMARK 3 S11: -0.0440 S12: 0.1609 S13: -0.0869 REMARK 3 S21: -0.1417 S22: 0.1405 S23: 0.0374 REMARK 3 S31: 0.2273 S32: 0.0376 S33: -0.0782 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1690 THROUGH 1726 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.7730 59.2145 15.5796 REMARK 3 T TENSOR REMARK 3 T11: 0.3771 T22: 0.3031 REMARK 3 T33: 0.3231 T12: 0.0237 REMARK 3 T13: -0.0192 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 0.9628 L22: 2.1027 REMARK 3 L33: 1.4278 L12: 0.2357 REMARK 3 L13: -0.4718 L23: 0.4297 REMARK 3 S TENSOR REMARK 3 S11: -0.1004 S12: -0.2300 S13: 0.1326 REMARK 3 S21: 0.5218 S22: 0.0790 S23: -0.0709 REMARK 3 S31: 0.1240 S32: -0.0347 S33: 0.0014 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2331 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V42 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226801. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0032 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL CRYO-COOLED REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34501 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.987 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.0 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.94000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 5V3W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS-HCL, 2.0-1.8 M AMMONIUM REMARK 280 SULFATE, 2%-5% V/V PPG P400, PH 8.5, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 44.68100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.69950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.68100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.69950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1448 REMARK 465 ASN A 1449 REMARK 465 ALA A 1450 REMARK 465 GLN A 1451 REMARK 465 ILE A 1452 REMARK 465 ASP A 1453 REMARK 465 THR A 1593 REMARK 465 ILE A 1594 REMARK 465 SER A 1621 REMARK 465 GLY A 1622 REMARK 465 VAL A 1623 REMARK 465 GLN A 1624 REMARK 465 SER A 1728 REMARK 465 GLU A 1729 REMARK 465 VAL A 1730 REMARK 465 GLY A 1731 REMARK 465 LYS A 1732 REMARK 465 GLN A 1733 REMARK 465 SER B 1448 REMARK 465 ASN B 1449 REMARK 465 ALA B 1450 REMARK 465 GLU B 1464 REMARK 465 ALA B 1465 REMARK 465 GLY B 1466 REMARK 465 PHE B 1590 REMARK 465 ASN B 1591 REMARK 465 VAL B 1592 REMARK 465 THR B 1727 REMARK 465 SER B 1728 REMARK 465 GLU B 1729 REMARK 465 VAL B 1730 REMARK 465 GLY B 1731 REMARK 465 LYS B 1732 REMARK 465 GLN B 1733 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1464 CG CD OE1 OE2 REMARK 470 GLU A1567 CG CD OE1 OE2 REMARK 470 GLU A1587 CG CD OE1 OE2 REMARK 470 LYS A1588 CG CD CE NZ REMARK 470 GLU A1600 CG CD OE1 OE2 REMARK 470 GLU A1608 CG CD OE1 OE2 REMARK 470 PHE A1613 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LEU A1615 CG CD1 CD2 REMARK 470 ASP A1616 CG OD1 OD2 REMARK 470 VAL A1618 CG1 CG2 REMARK 470 SER A1619 OG REMARK 470 GLN A1620 CG CD OE1 NE2 REMARK 470 ILE A1625 CG1 CG2 CD1 REMARK 470 ILE A1630 CG1 CG2 CD1 REMARK 470 MET A1669 CG SD CE REMARK 470 GLN B1451 CG CD OE1 NE2 REMARK 470 GLU B1508 CG CD OE1 OE2 REMARK 470 GLU B1567 CG CD OE1 OE2 REMARK 470 LYS B1572 CG CD CE NZ REMARK 470 GLU B1573 CG CD OE1 OE2 REMARK 470 ILE B1575 CG1 CG2 CD1 REMARK 470 ARG B1576 CG CD NE CZ NH1 NH2 REMARK 470 LYS B1577 CG CD CE NZ REMARK 470 TYR B1582 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B1587 CG CD OE1 OE2 REMARK 470 ILE B1594 CG1 CG2 CD1 REMARK 470 ILE B1597 CG1 CG2 CD1 REMARK 470 TYR B1599 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B1600 CG CD OE1 OE2 REMARK 470 ILE B1625 CG1 CG2 CD1 REMARK 470 MET B1669 CG SD CE REMARK 470 ASP B1725 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 1987 O HOH B 1997 2.01 REMARK 500 O HOH A 2007 O HOH A 2031 2.14 REMARK 500 OD1 ASP B 1453 O HOH B 1901 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1533 -134.47 59.54 REMARK 500 GLN A1570 69.84 -105.65 REMARK 500 SER B1533 -134.97 59.15 REMARK 500 GLN B1570 72.12 -110.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue I66 A 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue I66 B 1801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V3W RELATED DB: PDB REMARK 900 RELATED ID: 5V3X RELATED DB: PDB REMARK 900 RELATED ID: 5V3Y RELATED DB: PDB REMARK 900 RELATED ID: 5V3Z RELATED DB: PDB REMARK 900 RELATED ID: 5V40 RELATED DB: PDB REMARK 900 RELATED ID: 5V41 RELATED DB: PDB DBREF1 5V42 A 1451 1733 UNP A0A0T9CRX1_MYCTX DBREF2 5V42 A A0A0T9CRX1 113 395 DBREF1 5V42 B 1451 1733 UNP A0A0T9CRX1_MYCTX DBREF2 5V42 B A0A0T9CRX1 113 395 SEQADV 5V42 SER A 1448 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V42 ASN A 1449 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V42 ALA A 1450 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V42 SER B 1448 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V42 ASN B 1449 UNP A0A0T9CRX EXPRESSION TAG SEQADV 5V42 ALA B 1450 UNP A0A0T9CRX EXPRESSION TAG SEQRES 1 A 286 SER ASN ALA GLN ILE ASP GLY PHE VAL ARG THR LEU ARG SEQRES 2 A 286 ALA ARG PRO GLU ALA GLY GLY LYS VAL PRO VAL PHE VAL SEQRES 3 A 286 PHE HIS PRO ALA GLY GLY SER THR VAL VAL TYR GLU PRO SEQRES 4 A 286 LEU LEU GLY ARG LEU PRO ALA ASP THR PRO MET TYR GLY SEQRES 5 A 286 PHE GLU ARG VAL GLU GLY SER ILE GLU GLU ARG ALA GLN SEQRES 6 A 286 GLN TYR VAL PRO LYS LEU ILE GLU MET GLN GLY ASP GLY SEQRES 7 A 286 PRO TYR VAL LEU VAL GLY TRP SER LEU GLY GLY VAL LEU SEQRES 8 A 286 ALA TYR ALA CYS ALA ILE GLY LEU ARG ARG LEU GLY LYS SEQRES 9 A 286 ASP VAL ARG PHE VAL GLY LEU ILE ASP ALA VAL ARG ALA SEQRES 10 A 286 GLY GLU GLU ILE PRO GLN THR LYS GLU GLU ILE ARG LYS SEQRES 11 A 286 ARG TRP ASP ARG TYR ALA ALA PHE ALA GLU LYS THR PHE SEQRES 12 A 286 ASN VAL THR ILE PRO ALA ILE PRO TYR GLU GLN LEU GLU SEQRES 13 A 286 GLU LEU ASP ASP GLU GLY GLN VAL ARG PHE VAL LEU ASP SEQRES 14 A 286 ALA VAL SER GLN SER GLY VAL GLN ILE PRO ALA GLY ILE SEQRES 15 A 286 ILE GLU HIS GLN ARG THR SER TYR LEU ASP ASN ARG ALA SEQRES 16 A 286 ILE ASP THR ALA GLN ILE GLN PRO TYR ASP GLY HIS VAL SEQRES 17 A 286 THR LEU TYR MET ALA ASP ARG TYR HIS ASP ASP ALA ILE SEQRES 18 A 286 MET PHE GLU PRO ARG TYR ALA VAL ARG GLN PRO ASP GLY SEQRES 19 A 286 GLY TRP GLY GLU TYR VAL SER ASP LEU GLU VAL VAL PRO SEQRES 20 A 286 ILE GLY GLY GLU HIS ILE GLN ALA ILE ASP GLU PRO ILE SEQRES 21 A 286 ILE ALA LYS VAL GLY GLU HIS MET SER ARG ALA LEU GLY SEQRES 22 A 286 GLN ILE GLU ALA ASP ARG THR SER GLU VAL GLY LYS GLN SEQRES 1 B 286 SER ASN ALA GLN ILE ASP GLY PHE VAL ARG THR LEU ARG SEQRES 2 B 286 ALA ARG PRO GLU ALA GLY GLY LYS VAL PRO VAL PHE VAL SEQRES 3 B 286 PHE HIS PRO ALA GLY GLY SER THR VAL VAL TYR GLU PRO SEQRES 4 B 286 LEU LEU GLY ARG LEU PRO ALA ASP THR PRO MET TYR GLY SEQRES 5 B 286 PHE GLU ARG VAL GLU GLY SER ILE GLU GLU ARG ALA GLN SEQRES 6 B 286 GLN TYR VAL PRO LYS LEU ILE GLU MET GLN GLY ASP GLY SEQRES 7 B 286 PRO TYR VAL LEU VAL GLY TRP SER LEU GLY GLY VAL LEU SEQRES 8 B 286 ALA TYR ALA CYS ALA ILE GLY LEU ARG ARG LEU GLY LYS SEQRES 9 B 286 ASP VAL ARG PHE VAL GLY LEU ILE ASP ALA VAL ARG ALA SEQRES 10 B 286 GLY GLU GLU ILE PRO GLN THR LYS GLU GLU ILE ARG LYS SEQRES 11 B 286 ARG TRP ASP ARG TYR ALA ALA PHE ALA GLU LYS THR PHE SEQRES 12 B 286 ASN VAL THR ILE PRO ALA ILE PRO TYR GLU GLN LEU GLU SEQRES 13 B 286 GLU LEU ASP ASP GLU GLY GLN VAL ARG PHE VAL LEU ASP SEQRES 14 B 286 ALA VAL SER GLN SER GLY VAL GLN ILE PRO ALA GLY ILE SEQRES 15 B 286 ILE GLU HIS GLN ARG THR SER TYR LEU ASP ASN ARG ALA SEQRES 16 B 286 ILE ASP THR ALA GLN ILE GLN PRO TYR ASP GLY HIS VAL SEQRES 17 B 286 THR LEU TYR MET ALA ASP ARG TYR HIS ASP ASP ALA ILE SEQRES 18 B 286 MET PHE GLU PRO ARG TYR ALA VAL ARG GLN PRO ASP GLY SEQRES 19 B 286 GLY TRP GLY GLU TYR VAL SER ASP LEU GLU VAL VAL PRO SEQRES 20 B 286 ILE GLY GLY GLU HIS ILE GLN ALA ILE ASP GLU PRO ILE SEQRES 21 B 286 ILE ALA LYS VAL GLY GLU HIS MET SER ARG ALA LEU GLY SEQRES 22 B 286 GLN ILE GLU ALA ASP ARG THR SER GLU VAL GLY LYS GLN HET I66 A1801 27 HET I66 B1801 27 HETNAM I66 ETHYL 5-HYDROXY-2-PHENYL-4-(PYRROLIDIN-1-YLMETHYL)-1- HETNAM 2 I66 BENZOFURAN-3-CARBOXYLATE FORMUL 3 I66 2(C22 H23 N O4) FORMUL 5 HOH *247(H2 O) HELIX 1 AA1 SER A 1480 VAL A 1483 5 4 HELIX 2 AA2 TYR A 1484 ARG A 1490 1 7 HELIX 3 AA3 SER A 1506 GLY A 1523 1 18 HELIX 4 AA4 SER A 1533 LEU A 1549 1 17 HELIX 5 AA5 THR A 1571 ASN A 1591 1 21 HELIX 6 AA6 PRO A 1598 GLU A 1604 1 7 HELIX 7 AA7 ASP A 1606 GLN A 1620 1 15 HELIX 8 AA8 PRO A 1626 THR A 1645 1 20 HELIX 9 AA9 HIS A 1664 GLU A 1671 1 8 HELIX 10 AB1 PRO A 1672 VAL A 1676 5 5 HELIX 11 AB2 GLU A 1698 ALA A 1702 5 5 HELIX 12 AB3 PRO A 1706 THR A 1727 1 22 HELIX 13 AB4 SER B 1480 VAL B 1483 5 4 HELIX 14 AB5 TYR B 1484 ARG B 1490 1 7 HELIX 15 AB6 SER B 1506 GLY B 1523 1 18 HELIX 16 AB7 SER B 1533 LEU B 1549 1 17 HELIX 17 AB8 THR B 1571 THR B 1589 1 19 HELIX 18 AB9 PRO B 1598 GLU B 1603 1 6 HELIX 19 AC1 ASP B 1606 GLN B 1620 1 15 HELIX 20 AC2 PRO B 1626 THR B 1645 1 20 HELIX 21 AC3 HIS B 1664 GLU B 1671 1 8 HELIX 22 AC4 PRO B 1672 VAL B 1676 5 5 HELIX 23 AC5 GLU B 1698 ALA B 1702 5 5 HELIX 24 AC6 PRO B 1706 ARG B 1726 1 21 SHEET 1 AA1 7 VAL A1456 ARG A1460 0 SHEET 2 AA1 7 MET A1497 PHE A1500 -1 O GLY A1499 N ARG A1457 SHEET 3 AA1 7 VAL A1471 PHE A1474 1 N VAL A1473 O PHE A1500 SHEET 4 AA1 7 TYR A1527 TRP A1532 1 O VAL A1530 N PHE A1472 SHEET 5 AA1 7 VAL A1553 ILE A1559 1 O ILE A1559 N GLY A1531 SHEET 6 AA1 7 VAL A1655 MET A1659 1 O TYR A1658 N LEU A1558 SHEET 7 AA1 7 LEU A1690 PRO A1694 1 O GLU A1691 N LEU A1657 SHEET 1 AA2 8 ILE B1452 ASP B1453 0 SHEET 2 AA2 8 VAL B1456 ARG B1460 -1 O VAL B1456 N ASP B1453 SHEET 3 AA2 8 MET B1497 PHE B1500 -1 O GLY B1499 N ARG B1457 SHEET 4 AA2 8 VAL B1471 PHE B1474 1 N VAL B1473 O PHE B1500 SHEET 5 AA2 8 TYR B1527 TRP B1532 1 O VAL B1530 N PHE B1472 SHEET 6 AA2 8 VAL B1553 ILE B1559 1 O ILE B1559 N GLY B1531 SHEET 7 AA2 8 VAL B1655 MET B1659 1 O THR B1656 N VAL B1556 SHEET 8 AA2 8 LEU B1690 PRO B1694 1 O GLU B1691 N LEU B1657 CISPEP 1 GLY A 1525 PRO A 1526 0 2.57 CISPEP 2 GLU A 1705 PRO A 1706 0 3.52 CISPEP 3 GLY B 1525 PRO B 1526 0 2.89 CISPEP 4 GLU B 1705 PRO B 1706 0 2.51 SITE 1 AC1 11 TYR A1582 GLN A1633 SER A1636 TYR A1637 SITE 2 AC1 11 ASN A1640 ASP A1644 ASP A1666 ALA A1667 SITE 3 AC1 11 PHE A1670 GLU A1671 TYR A1674 SITE 1 AC2 10 GLN B1633 TYR B1637 ASN B1640 ARG B1641 SITE 2 AC2 10 ASP B1644 ASP B1666 ALA B1667 PHE B1670 SITE 3 AC2 10 GLU B1671 TYR B1674 CRYST1 89.362 109.399 56.895 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011190 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017576 0.00000