HEADER VIRAL PROTEIN / INHIBITOR 14-MAR-17 5V5D TITLE ROOM TEMPERATURE (280K) CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA- TITLE 2 ASSOCIATED HERPESVIRUS PROTEASE IN COMPLEX WITH ALLOSTERIC INHIBITOR TITLE 3 (COMPOUND 250) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF 17; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 23-215; COMPND 5 SYNONYM: ORF17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 8; SOURCE 3 ORGANISM_COMMON: HHV-8; SOURCE 4 ORGANISM_TAXID: 37296; SOURCE 5 GENE: ORF17; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEASE, ALLOSTERIC INHIBITOR, HERPESVIRUS, VIRAL PROTEIN - KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.C.THOMPSON,T.M.ACKER,J.S.FRASER,C.S.CRAIK REVDAT 6 04-OCT-23 5V5D 1 REMARK REVDAT 5 04-DEC-19 5V5D 1 REMARK REVDAT 4 20-SEP-17 5V5D 1 REMARK REVDAT 3 06-SEP-17 5V5D 1 JRNL REVDAT 2 16-AUG-17 5V5D 1 JRNL REVDAT 1 12-APR-17 5V5D 0 JRNL AUTH T.M.ACKER,J.E.GABLE,M.F.BOHN,P.JAISHANKAR,M.C.THOMPSON, JRNL AUTH 2 J.S.FRASER,A.R.RENSLO,C.S.CRAIK JRNL TITL ALLOSTERIC INHIBITORS, CRYSTALLOGRAPHY, AND COMPARATIVE JRNL TITL 2 ANALYSIS REVEAL NETWORK OF COORDINATED MOVEMENT ACROSS HUMAN JRNL TITL 3 HERPESVIRUS PROTEASES. JRNL REF J. AM. CHEM. SOC. V. 139 11650 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28759216 JRNL DOI 10.1021/JACS.7B04030 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2686 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 20558 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980 REMARK 3 FREE R VALUE TEST SET COUNT : 1024 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0567 - 4.0245 0.83 2737 128 0.1423 0.1581 REMARK 3 2 4.0245 - 3.1946 0.87 2767 141 0.1527 0.2026 REMARK 3 3 3.1946 - 2.7908 0.89 2755 149 0.1840 0.2290 REMARK 3 4 2.7908 - 2.5357 0.90 2774 157 0.1973 0.2373 REMARK 3 5 2.5357 - 2.3539 0.91 2846 150 0.2084 0.2573 REMARK 3 6 2.3539 - 2.2151 0.92 2863 135 0.2195 0.2626 REMARK 3 7 2.2151 - 2.1042 0.92 2792 164 0.2410 0.2690 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.47 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3214 REMARK 3 ANGLE : 0.595 4413 REMARK 3 CHIRALITY : 0.045 506 REMARK 3 PLANARITY : 0.003 566 REMARK 3 DIHEDRAL : 16.846 1887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.0223 -42.5819 -28.7665 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.3200 REMARK 3 T33: 0.2900 T12: -0.0744 REMARK 3 T13: -0.0343 T23: 0.1061 REMARK 3 L TENSOR REMARK 3 L11: 0.2179 L22: 0.2811 REMARK 3 L33: 0.2865 L12: -0.2625 REMARK 3 L13: -0.0507 L23: 0.0789 REMARK 3 S TENSOR REMARK 3 S11: 0.0467 S12: -0.0115 S13: -0.0363 REMARK 3 S21: 0.1981 S22: -0.1742 S23: -0.0889 REMARK 3 S31: 0.0159 S32: 0.1699 S33: -0.0291 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4220 -36.6869 -38.7714 REMARK 3 T TENSOR REMARK 3 T11: 0.2275 T22: 0.2359 REMARK 3 T33: 0.2358 T12: -0.0268 REMARK 3 T13: 0.0112 T23: 0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.8620 L22: 0.0953 REMARK 3 L33: 1.1680 L12: -0.1888 REMARK 3 L13: -0.2377 L23: -0.0174 REMARK 3 S TENSOR REMARK 3 S11: 0.0312 S12: -0.0645 S13: -0.1263 REMARK 3 S21: -0.0431 S22: 0.0253 S23: 0.0270 REMARK 3 S31: 0.0171 S32: -0.1724 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2802 -42.8862 -23.1608 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.4558 REMARK 3 T33: 0.2283 T12: -0.0107 REMARK 3 T13: -0.0122 T23: 0.0704 REMARK 3 L TENSOR REMARK 3 L11: -0.0070 L22: 0.0694 REMARK 3 L33: 0.0815 L12: -0.0332 REMARK 3 L13: -0.0165 L23: 0.0612 REMARK 3 S TENSOR REMARK 3 S11: -0.1492 S12: -0.3290 S13: -0.0268 REMARK 3 S21: 0.0774 S22: -0.0866 S23: -0.0836 REMARK 3 S31: -0.2035 S32: 0.3924 S33: -0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1732 -42.4233 -27.7824 REMARK 3 T TENSOR REMARK 3 T11: 0.3269 T22: 0.3670 REMARK 3 T33: 0.3200 T12: -0.0129 REMARK 3 T13: 0.0304 T23: 0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.5661 L22: 0.2894 REMARK 3 L33: 0.0198 L12: -0.3416 REMARK 3 L13: -0.0209 L23: 0.0728 REMARK 3 S TENSOR REMARK 3 S11: -0.1252 S12: -0.1128 S13: -0.2202 REMARK 3 S21: 0.1021 S22: 0.0317 S23: -0.0042 REMARK 3 S31: 0.1072 S32: 0.1712 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3328 -46.0330 -38.9489 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.3399 REMARK 3 T33: 0.3466 T12: -0.0726 REMARK 3 T13: 0.0043 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.5133 L22: 0.1646 REMARK 3 L33: 0.3560 L12: 0.0504 REMARK 3 L13: 0.3050 L23: 0.1068 REMARK 3 S TENSOR REMARK 3 S11: 0.0585 S12: 0.1369 S13: -0.1846 REMARK 3 S21: -0.0114 S22: -0.0423 S23: 0.0823 REMARK 3 S31: 0.1270 S32: -0.5403 S33: 0.0656 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7600 -25.4151 -34.3656 REMARK 3 T TENSOR REMARK 3 T11: 0.2393 T22: 0.3324 REMARK 3 T33: 0.3514 T12: 0.0600 REMARK 3 T13: 0.1140 T23: -0.0853 REMARK 3 L TENSOR REMARK 3 L11: 0.5306 L22: 0.2059 REMARK 3 L33: 1.2150 L12: 0.2541 REMARK 3 L13: 0.2453 L23: -0.0210 REMARK 3 S TENSOR REMARK 3 S11: 0.0059 S12: 0.1248 S13: -0.0103 REMARK 3 S21: -0.2534 S22: -0.1479 S23: 0.0995 REMARK 3 S31: -0.4807 S32: -0.0834 S33: -0.2145 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.4866 -30.6879 -4.4834 REMARK 3 T TENSOR REMARK 3 T11: 0.2770 T22: 0.2214 REMARK 3 T33: 0.2421 T12: 0.0054 REMARK 3 T13: 0.0517 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 0.2282 L22: 0.2620 REMARK 3 L33: 0.6038 L12: -0.0927 REMARK 3 L13: -0.4211 L23: 0.4670 REMARK 3 S TENSOR REMARK 3 S11: -0.1572 S12: -0.0166 S13: -0.1663 REMARK 3 S21: 0.1740 S22: 0.0120 S23: -0.0729 REMARK 3 S31: 0.2106 S32: 0.0119 S33: -0.0146 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4288 -24.9270 -11.1754 REMARK 3 T TENSOR REMARK 3 T11: 0.2278 T22: 0.1743 REMARK 3 T33: 0.1869 T12: 0.0374 REMARK 3 T13: 0.0398 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 0.7430 L22: 0.8413 REMARK 3 L33: 0.9353 L12: 0.0486 REMARK 3 L13: -0.1905 L23: 0.3746 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0957 S13: 0.0136 REMARK 3 S21: -0.1141 S22: -0.0072 S23: -0.0432 REMARK 3 S31: 0.2097 S32: 0.2081 S33: -0.0026 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): -30.3954 -4.3674 -8.9263 REMARK 3 T TENSOR REMARK 3 T11: 0.3168 T22: 0.2476 REMARK 3 T33: 0.3994 T12: 0.0096 REMARK 3 T13: 0.0062 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 0.2538 L22: 0.2174 REMARK 3 L33: 0.1908 L12: -0.2062 REMARK 3 L13: -0.0900 L23: -0.0408 REMARK 3 S TENSOR REMARK 3 S11: 0.2911 S12: 0.0826 S13: 0.4272 REMARK 3 S21: 0.1213 S22: 0.0427 S23: -0.5189 REMARK 3 S31: -0.1793 S32: 0.2414 S33: 0.0037 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 101 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.1211 -16.0626 -7.8400 REMARK 3 T TENSOR REMARK 3 T11: 0.1941 T22: 0.1655 REMARK 3 T33: 0.1922 T12: 0.0141 REMARK 3 T13: 0.0082 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.3395 L22: 0.0666 REMARK 3 L33: 0.2463 L12: -0.2081 REMARK 3 L13: 0.2971 L23: -0.1283 REMARK 3 S TENSOR REMARK 3 S11: 0.0210 S12: -0.0922 S13: 0.0899 REMARK 3 S21: 0.0601 S22: -0.1431 S23: 0.2622 REMARK 3 S31: 0.0210 S32: 0.0837 S33: 0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.8037 -31.7318 -5.3930 REMARK 3 T TENSOR REMARK 3 T11: 0.3380 T22: 0.1901 REMARK 3 T33: 0.2557 T12: 0.0264 REMARK 3 T13: 0.0597 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.2317 L22: 0.1471 REMARK 3 L33: 0.1449 L12: -0.2787 REMARK 3 L13: -0.0603 L23: 0.0191 REMARK 3 S TENSOR REMARK 3 S11: -0.1668 S12: -0.1312 S13: -0.0677 REMARK 3 S21: -0.0387 S22: 0.0727 S23: 0.0508 REMARK 3 S31: 0.2591 S32: 0.0614 S33: -0.0071 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 165 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.6224 -15.3256 -2.6728 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.3378 REMARK 3 T33: 0.2092 T12: -0.0719 REMARK 3 T13: 0.0257 T23: -0.0425 REMARK 3 L TENSOR REMARK 3 L11: 0.1491 L22: 0.3632 REMARK 3 L33: 0.0663 L12: -0.0829 REMARK 3 L13: -0.0586 L23: 0.1369 REMARK 3 S TENSOR REMARK 3 S11: 0.0521 S12: -0.1397 S13: 0.1783 REMARK 3 S21: -0.0295 S22: 0.0888 S23: -0.0071 REMARK 3 S31: -0.2437 S32: 0.5602 S33: 0.0086 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 166 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8410 -23.3222 -8.1334 REMARK 3 T TENSOR REMARK 3 T11: 0.2461 T22: 0.5699 REMARK 3 T33: 0.3830 T12: 0.0476 REMARK 3 T13: 0.0181 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 0.1698 L22: 0.6530 REMARK 3 L33: 0.3316 L12: -0.0679 REMARK 3 L13: 0.1660 L23: 0.1333 REMARK 3 S TENSOR REMARK 3 S11: -0.1632 S12: -0.0908 S13: 0.0735 REMARK 3 S21: 0.1833 S22: 0.3092 S23: -0.5730 REMARK 3 S31: 0.0597 S32: 0.2310 S33: 0.0039 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.0555 -21.0524 -24.7658 REMARK 3 T TENSOR REMARK 3 T11: 0.3454 T22: 0.3246 REMARK 3 T33: 0.2537 T12: 0.0561 REMARK 3 T13: 0.0476 T23: -0.0462 REMARK 3 L TENSOR REMARK 3 L11: 0.0583 L22: 0.1307 REMARK 3 L33: 0.1421 L12: -0.1053 REMARK 3 L13: -0.0153 L23: 0.0540 REMARK 3 S TENSOR REMARK 3 S11: 0.0646 S12: 0.2697 S13: 0.1617 REMARK 3 S21: 0.0198 S22: -0.1333 S23: 0.0363 REMARK 3 S31: 0.1322 S32: 0.1367 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V5D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226747. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 280 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1159 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20562 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 47.045 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 200 DATA REDUNDANCY : 4.636 REMARK 200 R MERGE (I) : 0.10300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.52 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.440 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 3NJQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM ACETATE PH 7.8 0.88M REMARK 280 SODIUM PHOSPHATE MONOBASIC 1.32M POTASSIUM PHOSPHATE DIBASIC REMARK 280 0.2M POTASSIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.53000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 47.04500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.84000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.53000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 47.04500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.84000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.53000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 47.04500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.84000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.53000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 47.04500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.84000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 353 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 195 REMARK 465 LEU A 196 REMARK 465 ASN B 96 REMARK 465 LEU B 123 REMARK 465 SER B 124 REMARK 465 GLN B 125 REMARK 465 THR B 126 REMARK 465 PRO B 127 REMARK 465 SER B 128 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY A 145 HG1 THR A 146 1.56 REMARK 500 OG SER B 159 O HOH B 301 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 16 104.76 -56.49 REMARK 500 GLN A 125 -149.97 -92.76 REMARK 500 THR A 146 152.22 71.79 REMARK 500 SER B 62 -110.64 51.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8OY B 202 DBREF 5V5D A 4 196 UNP O40922 O40922_HHV8 23 215 DBREF 5V5D B 4 196 UNP O40922 O40922_HHV8 23 215 SEQRES 1 A 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 A 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 A 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 A 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 A 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 A 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 A 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 A 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 A 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 A 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 A 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 A 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 A 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 A 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 A 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU SEQRES 1 B 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 B 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 B 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 B 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 B 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 B 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 B 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 B 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 B 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 B 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 B 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 B 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 B 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 B 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 B 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU HET 8OY A 201 57 HET 8OY B 201 57 HET 8OY B 202 57 HETNAM 8OY 4-{[6-(CYCLOHEXYLMETHYL)PYRIDINE-2-CARBONYL]AMINO}-3- HETNAM 2 8OY (PHENYLAMINO)BENZOIC ACID FORMUL 3 8OY 3(C26 H27 N3 O3) FORMUL 6 HOH *107(H2 O) HELIX 1 AA1 ASP A 26 LEU A 34 5 9 HELIX 2 AA2 LEU A 47 GLU A 51 5 5 HELIX 3 AA3 SER A 73 SER A 87 1 15 HELIX 4 AA4 SER A 87 ALA A 92 1 6 HELIX 5 AA5 GLU A 100 LEU A 110 1 11 HELIX 6 AA6 HIS A 119 GLN A 125 1 7 HELIX 7 AA7 ASP A 153 ARG A 160 1 8 HELIX 8 AA8 SER A 165 SER A 178 1 14 HELIX 9 AA9 ASP B 26 LEU B 34 5 9 HELIX 10 AB1 SER B 73 SER B 87 1 15 HELIX 11 AB2 SER B 87 ALA B 92 1 6 HELIX 12 AB3 GLU B 100 LEU B 110 1 11 HELIX 13 AB4 ASP B 153 SER B 159 1 7 HELIX 14 AB5 SER B 165 SER B 178 1 14 HELIX 15 AB6 CYS B 179 LEU B 184 5 6 SHEET 1 AA1 8 ASP A 12 VAL A 14 0 SHEET 2 AA1 8 GLY A 112 SER A 117 1 O LEU A 115 N ASP A 12 SHEET 3 AA1 8 PHE A 132 CYS A 138 -1 O CYS A 138 N GLY A 112 SHEET 4 AA1 8 PRO A 41 ILE A 44 1 N THR A 43 O LEU A 137 SHEET 5 AA1 8 GLY A 53 VAL A 61 -1 O GLY A 53 N ILE A 42 SHEET 6 AA1 8 GLY A 64 ILE A 71 -1 O THR A 68 N LEU A 56 SHEET 7 AA1 8 LEU A 5 PHE A 10 -1 N GLY A 9 O CYS A 67 SHEET 8 AA1 8 VAL A 149 GLY A 151 -1 O GLY A 151 N TYR A 6 SHEET 1 AA2 9 LEU B 23 TYR B 24 0 SHEET 2 AA2 9 ASP B 12 SER B 15 -1 N SER B 15 O LEU B 23 SHEET 3 AA2 9 GLY B 112 SER B 117 1 O SER B 117 N VAL B 14 SHEET 4 AA2 9 PHE B 132 CYS B 138 -1 O CYS B 138 N GLY B 112 SHEET 5 AA2 9 PRO B 41 ILE B 44 1 N THR B 43 O LEU B 137 SHEET 6 AA2 9 GLY B 53 VAL B 61 -1 O GLY B 53 N ILE B 42 SHEET 7 AA2 9 GLY B 64 ILE B 71 -1 O THR B 68 N LEU B 56 SHEET 8 AA2 9 LEU B 5 PHE B 10 -1 N LEU B 5 O ILE B 71 SHEET 9 AA2 9 VAL B 149 GLY B 151 -1 O GLY B 151 N TYR B 6 CISPEP 1 LEU A 34 PRO A 35 0 1.36 CISPEP 2 LEU B 34 PRO B 35 0 -0.46 CISPEP 3 GLY B 129 PRO B 130 0 -1.26 SITE 1 AC1 7 ILE A 105 TRP A 109 HOH A 337 LEU B 47 SITE 2 AC1 7 PRO B 192 8OY B 201 8OY B 202 SITE 1 AC2 12 TRP A 109 8OY A 201 LEU B 79 LEU B 83 SITE 2 AC2 12 VAL B 89 TRP B 109 SER B 191 PRO B 192 SITE 3 AC2 12 LEU B 193 GLU B 194 THR B 195 HOH B 317 SITE 1 AC3 10 ARG A 82 LEU A 83 SER A 87 TRP A 109 SITE 2 AC3 10 8OY A 201 ILE B 44 ALA B 139 LEU B 140 SITE 3 AC3 10 HOH B 308 HOH B 338 CRYST1 69.060 94.090 119.680 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014480 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008356 0.00000