HEADER VIRAL PROTEIN / INHIBITOR 14-MAR-17 5V5E TITLE ROOM TEMPERATURE (280K) CRYSTAL STRUCTURE OF KAPOSI'S SARCOMA- TITLE 2 ASSOCIATED HERPESVIRUS PROTEASE IN COMPLEX WITH ALLOSTERIC INHIBITOR TITLE 3 (COMPOUND 733) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ORF 17; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 23-215; COMPND 5 SYNONYM: ORF17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN HERPESVIRUS 8; SOURCE 3 ORGANISM_COMMON: HHV-8; SOURCE 4 ORGANISM_TAXID: 37296; SOURCE 5 GENE: ORF17; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEASE, ALLOSTERIC INHIBITOR, HERPESVIRUS, VIRAL PROTEIN - KEYWDS 2 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.C.THOMPSON,T.M.ACKER,J.S.FRASER,C.S.CRAIK REVDAT 6 04-OCT-23 5V5E 1 REMARK REVDAT 5 04-DEC-19 5V5E 1 REMARK REVDAT 4 20-SEP-17 5V5E 1 REMARK REVDAT 3 06-SEP-17 5V5E 1 JRNL REVDAT 2 16-AUG-17 5V5E 1 JRNL REVDAT 1 12-APR-17 5V5E 0 JRNL AUTH T.M.ACKER,J.E.GABLE,M.F.BOHN,P.JAISHANKAR,M.C.THOMPSON, JRNL AUTH 2 J.S.FRASER,A.R.RENSLO,C.S.CRAIK JRNL TITL ALLOSTERIC INHIBITORS, CRYSTALLOGRAPHY, AND COMPARATIVE JRNL TITL 2 ANALYSIS REVEAL NETWORK OF COORDINATED MOVEMENT ACROSS HUMAN JRNL TITL 3 HERPESVIRUS PROTEASES. JRNL REF J. AM. CHEM. SOC. V. 139 11650 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28759216 JRNL DOI 10.1021/JACS.7B04030 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2686 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 18809 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.1584 - 4.3938 0.97 2650 133 0.1520 0.1644 REMARK 3 2 4.3938 - 3.4890 0.99 2611 140 0.1575 0.2060 REMARK 3 3 3.4890 - 3.0484 0.98 2552 126 0.1955 0.2482 REMARK 3 4 3.0484 - 2.7699 0.99 2575 133 0.2712 0.3070 REMARK 3 5 2.7699 - 2.5715 0.97 2478 142 0.3041 0.3285 REMARK 3 6 2.5715 - 2.4199 0.98 2503 130 0.2961 0.3176 REMARK 3 7 2.4199 - 2.2988 0.97 2521 115 0.3117 0.3360 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 66.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3113 REMARK 3 ANGLE : 0.625 4273 REMARK 3 CHIRALITY : 0.044 485 REMARK 3 PLANARITY : 0.004 540 REMARK 3 DIHEDRAL : 16.211 1847 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1458 -9.7664 -36.4300 REMARK 3 T TENSOR REMARK 3 T11: 0.3078 T22: 0.2926 REMARK 3 T33: 0.3547 T12: 0.0100 REMARK 3 T13: -0.0785 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.5940 L22: 0.8098 REMARK 3 L33: 1.8664 L12: -0.0578 REMARK 3 L13: 1.0703 L23: -0.5531 REMARK 3 S TENSOR REMARK 3 S11: -0.2124 S12: 0.0394 S13: 0.0713 REMARK 3 S21: 0.1669 S22: 0.0396 S23: -0.1314 REMARK 3 S31: -0.3394 S32: 0.1140 S33: -0.1083 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 123 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2625 -5.0132 -33.0777 REMARK 3 T TENSOR REMARK 3 T11: 0.5613 T22: 0.4578 REMARK 3 T33: 0.4828 T12: 0.0136 REMARK 3 T13: -0.1284 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 0.6755 L22: 0.3747 REMARK 3 L33: 0.3375 L12: -0.3519 REMARK 3 L13: 0.1728 L23: 0.1450 REMARK 3 S TENSOR REMARK 3 S11: -0.3106 S12: 0.1248 S13: 0.4489 REMARK 3 S21: 0.0975 S22: 0.0099 S23: 0.0465 REMARK 3 S31: -0.6353 S32: -0.0872 S33: -0.0030 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 193 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.7305 -8.7519 -35.9745 REMARK 3 T TENSOR REMARK 3 T11: 0.5185 T22: 0.5632 REMARK 3 T33: 0.5433 T12: -0.1079 REMARK 3 T13: -0.2680 T23: 0.0814 REMARK 3 L TENSOR REMARK 3 L11: 0.7305 L22: 0.5621 REMARK 3 L33: 0.9437 L12: -0.2707 REMARK 3 L13: -0.5517 L23: 0.2184 REMARK 3 S TENSOR REMARK 3 S11: -0.3501 S12: 0.2602 S13: 0.0163 REMARK 3 S21: 0.0382 S22: 0.5336 S23: 0.1325 REMARK 3 S31: -0.3137 S32: 0.5006 S33: -0.1566 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7274 -17.9394 -6.2476 REMARK 3 T TENSOR REMARK 3 T11: 0.4351 T22: 0.3796 REMARK 3 T33: 0.3782 T12: -0.0436 REMARK 3 T13: -0.0631 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 0.1536 L22: 0.4709 REMARK 3 L33: 0.7311 L12: -0.1547 REMARK 3 L13: 0.3482 L23: -0.5851 REMARK 3 S TENSOR REMARK 3 S11: -0.1278 S12: 0.3247 S13: 0.1600 REMARK 3 S21: 0.2481 S22: 0.1520 S23: -0.0303 REMARK 3 S31: -0.4504 S32: 0.0193 S33: 0.0023 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 23 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.4791 -15.9810 -9.1549 REMARK 3 T TENSOR REMARK 3 T11: 0.4237 T22: 0.3553 REMARK 3 T33: 0.3395 T12: 0.1351 REMARK 3 T13: -0.0906 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.1921 L22: 1.5293 REMARK 3 L33: 0.2807 L12: 0.5428 REMARK 3 L13: 0.5795 L23: 0.1802 REMARK 3 S TENSOR REMARK 3 S11: -0.0915 S12: 0.0369 S13: 0.2061 REMARK 3 S21: -0.2436 S22: 0.0776 S23: -0.2122 REMARK 3 S31: -0.6354 S32: -0.2188 S33: -0.0496 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 53 THROUGH 122 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.9314 -28.0971 -10.5685 REMARK 3 T TENSOR REMARK 3 T11: 0.2929 T22: 0.2623 REMARK 3 T33: 0.2686 T12: 0.0210 REMARK 3 T13: -0.0517 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.0743 L22: 0.6563 REMARK 3 L33: 0.9006 L12: 0.4546 REMARK 3 L13: 0.3317 L23: -0.4544 REMARK 3 S TENSOR REMARK 3 S11: -0.0406 S12: 0.0243 S13: -0.1015 REMARK 3 S21: -0.1567 S22: 0.0881 S23: 0.1709 REMARK 3 S31: -0.0740 S32: -0.1225 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 123 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8375 -19.0595 -5.7768 REMARK 3 T TENSOR REMARK 3 T11: 0.3857 T22: 0.3120 REMARK 3 T33: 0.3415 T12: 0.0386 REMARK 3 T13: -0.0936 T23: 0.0222 REMARK 3 L TENSOR REMARK 3 L11: 0.1447 L22: 0.1209 REMARK 3 L33: 0.0188 L12: -0.0386 REMARK 3 L13: -0.0150 L23: -0.0535 REMARK 3 S TENSOR REMARK 3 S11: -0.2217 S12: -0.1394 S13: -0.0921 REMARK 3 S21: 0.1753 S22: 0.0406 S23: 0.0891 REMARK 3 S31: -0.1437 S32: -0.0590 S33: -0.0019 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 149 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.0709 -29.2596 -4.1316 REMARK 3 T TENSOR REMARK 3 T11: 0.3025 T22: 0.6040 REMARK 3 T33: 0.4226 T12: -0.0073 REMARK 3 T13: -0.0261 T23: 0.0382 REMARK 3 L TENSOR REMARK 3 L11: 0.3768 L22: 0.4640 REMARK 3 L33: 0.2998 L12: -0.0701 REMARK 3 L13: 0.1022 L23: -0.1260 REMARK 3 S TENSOR REMARK 3 S11: 0.1915 S12: -0.0843 S13: 0.0976 REMARK 3 S21: -0.0058 S22: 0.1220 S23: 0.1588 REMARK 3 S31: 0.3761 S32: -0.5897 S33: 0.0032 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5907 -25.8460 -23.3177 REMARK 3 T TENSOR REMARK 3 T11: 0.4587 T22: 0.5675 REMARK 3 T33: 0.2868 T12: 0.1038 REMARK 3 T13: -0.1266 T23: 0.0509 REMARK 3 L TENSOR REMARK 3 L11: 0.0254 L22: 1.3129 REMARK 3 L33: 0.2504 L12: -0.0502 REMARK 3 L13: -0.0584 L23: -0.2855 REMARK 3 S TENSOR REMARK 3 S11: 0.2046 S12: -0.1744 S13: -0.0917 REMARK 3 S21: -0.6402 S22: -0.3114 S23: -0.0381 REMARK 3 S31: -0.3468 S32: -0.0052 S33: 0.0834 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V5E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000226887. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JAN-14 REMARK 200 TEMPERATURE (KELVIN) : 280 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03317 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18827 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 31.156 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 3.684 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.75 REMARK 200 R MERGE FOR SHELL (I) : 0.95600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHASER REMARK 200 STARTING MODEL: 3NJQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M IMIDAZOLE PH 8.0 0.34M SODIUM REMARK 280 PHOSPHATE MONOBASIC 1.36M POTASSIUM PHOSPHATE DIBASIC 0.2M REMARK 280 POTASSIUM CHLORIDE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 36.70000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 48.42000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.54000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 36.70000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 48.42000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 59.54000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 36.70000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 48.42000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 59.54000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 36.70000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 48.42000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.54000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 -36.70000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -48.42000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -59.54000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 324 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 20 REMARK 465 GLN A 21 REMARK 465 GLU A 194 REMARK 465 THR A 195 REMARK 465 LEU A 196 REMARK 465 LYS B 95 REMARK 465 ASN B 96 REMARK 465 LEU B 97 REMARK 465 PRO B 98 REMARK 465 LYS B 99 REMARK 465 GLU B 100 REMARK 465 SER B 124 REMARK 465 GLN B 125 REMARK 465 THR B 126 REMARK 465 PRO B 127 REMARK 465 SER B 128 REMARK 465 LEU B 196 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 191 O25 8N4 B 201 2.04 REMARK 500 OD2 ASP B 12 O HOH B 301 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH12 ARG A 82 O25 8N4 B 202 8444 0.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 61 -169.04 -121.63 REMARK 500 GLU A 100 76.50 -118.17 REMARK 500 ARG A 143 -87.24 -117.61 REMARK 500 GLN B 21 -73.87 -77.21 REMARK 500 SER B 62 -107.03 46.78 REMARK 500 ARG B 143 30.16 -90.98 REMARK 500 ARG B 160 32.34 -97.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8N4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8N4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8N4 B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V5D RELATED DB: PDB DBREF 5V5E A 4 196 UNP O40922 O40922_HHV8 23 215 DBREF 5V5E B 4 196 UNP O40922 O40922_HHV8 23 215 SEQRES 1 A 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 A 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 A 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 A 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 A 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 A 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 A 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 A 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 A 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 A 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 A 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 A 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 A 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 A 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 A 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU SEQRES 1 B 193 GLY LEU TYR VAL GLY GLY PHE VAL ASP VAL VAL SER CYS SEQRES 2 B 193 PRO LYS LEU GLU GLN GLU LEU TYR LEU ASP PRO ASP GLN SEQRES 3 B 193 VAL THR ASP TYR LEU PRO VAL THR GLU PRO LEU PRO ILE SEQRES 4 B 193 THR ILE GLU HIS LEU PRO GLU THR GLU VAL GLY TRP THR SEQRES 5 B 193 LEU GLY LEU PHE GLN VAL SER HIS GLY ILE PHE CYS THR SEQRES 6 B 193 GLY ALA ILE THR SER PRO ALA PHE LEU GLU LEU ALA SER SEQRES 7 B 193 ARG LEU ALA ASP THR SER HIS VAL ALA ARG ALA PRO VAL SEQRES 8 B 193 LYS ASN LEU PRO LYS GLU PRO LEU LEU GLU ILE LEU HIS SEQRES 9 B 193 THR TRP LEU PRO GLY LEU SER LEU SER SER ILE HIS PRO SEQRES 10 B 193 ARG GLU LEU SER GLN THR PRO SER GLY PRO VAL PHE GLN SEQRES 11 B 193 HIS VAL SER LEU CYS ALA LEU GLY ARG ARG ARG GLY THR SEQRES 12 B 193 VAL ALA VAL TYR GLY HIS ASP ALA GLU TRP VAL VAL SER SEQRES 13 B 193 ARG PHE SER SER VAL SER LYS SER GLU ARG ALA HIS ILE SEQRES 14 B 193 LEU GLN HIS VAL SER SER CYS ARG LEU GLU ASP LEU SER SEQRES 15 B 193 THR PRO ASN PHE VAL SER PRO LEU GLU THR LEU HET 8N4 A 201 62 HET 8N4 B 201 62 HET 8N4 B 202 62 HETNAM 8N4 4-{[6-(CYCLOHEXYLMETHYL)PYRIDINE-2-CARBONYL]AMINO}-3- HETNAM 2 8N4 {[3-(TRIFLUOROMETHOXY)PHENYL]AMINO}BENZOIC ACID FORMUL 3 8N4 3(C27 H26 F3 N3 O4) FORMUL 6 HOH *43(H2 O) HELIX 1 AA1 ASP A 26 LEU A 34 5 9 HELIX 2 AA2 SER A 73 SER A 87 1 15 HELIX 3 AA3 SER A 87 ALA A 92 1 6 HELIX 4 AA4 GLU A 100 LEU A 110 1 11 HELIX 5 AA5 HIS A 119 LEU A 123 5 5 HELIX 6 AA6 ASP A 153 ARG A 160 1 8 HELIX 7 AA7 SER A 165 SER A 178 1 14 HELIX 8 AA8 ARG A 180 LEU A 184 5 5 HELIX 9 AA9 ASP B 26 LEU B 34 5 9 HELIX 10 AB1 SER B 73 SER B 87 1 15 HELIX 11 AB2 SER B 87 ALA B 92 1 6 HELIX 12 AB3 LEU B 102 LEU B 110 1 9 HELIX 13 AB4 HIS B 119 LEU B 123 5 5 HELIX 14 AB5 ASP B 153 SER B 159 1 7 HELIX 15 AB6 SER B 165 CYS B 179 1 15 HELIX 16 AB7 ARG B 180 LEU B 184 5 5 SHEET 1 AA1 9 LEU A 23 LEU A 25 0 SHEET 2 AA1 9 ASP A 12 SER A 15 -1 N VAL A 13 O LEU A 25 SHEET 3 AA1 9 GLY A 112 SER A 117 1 O LEU A 115 N ASP A 12 SHEET 4 AA1 9 PHE A 132 CYS A 138 -1 O CYS A 138 N GLY A 112 SHEET 5 AA1 9 PRO A 41 ILE A 44 1 N THR A 43 O LEU A 137 SHEET 6 AA1 9 GLY A 53 VAL A 61 -1 O GLY A 53 N ILE A 42 SHEET 7 AA1 9 GLY A 64 ILE A 71 -1 O THR A 68 N LEU A 56 SHEET 8 AA1 9 LEU A 5 PHE A 10 -1 N LEU A 5 O ILE A 71 SHEET 9 AA1 9 VAL A 149 GLY A 151 -1 O GLY A 151 N TYR A 6 SHEET 1 AA2 9 LEU B 23 LEU B 25 0 SHEET 2 AA2 9 VAL B 149 GLY B 151 0 SHEET 3 AA2 9 GLY B 64 ILE B 71 0 SHEET 4 AA2 9 GLY B 53 VAL B 61 -1 N LEU B 56 O THR B 68 SHEET 5 AA2 9 PRO B 41 ILE B 44 -1 N ILE B 42 O GLY B 53 SHEET 6 AA2 9 PHE B 132 CYS B 138 1 O LEU B 137 N THR B 43 SHEET 7 AA2 9 GLY B 112 SER B 117 -1 N GLY B 112 O CYS B 138 SHEET 8 AA2 9 LEU B 5 SER B 15 1 N ASP B 12 O LEU B 115 SHEET 9 AA2 9 VAL B 149 GLY B 151 -1 O GLY B 151 N TYR B 6 LINK NH1BARG A 82 O25 8N4 B 202 1555 8444 1.30 CISPEP 1 LEU A 34 PRO A 35 0 -0.25 CISPEP 2 LEU B 34 PRO B 35 0 0.48 SITE 1 AC1 9 LEU A 79 LEU A 83 PHE A 189 PRO A 192 SITE 2 AC1 9 GLU B 49 PRO B 192 LEU B 193 8N4 B 201 SITE 3 AC1 9 8N4 B 202 SITE 1 AC2 15 TRP A 109 8N4 A 201 ILE B 44 THR B 50 SITE 2 AC2 15 LEU B 79 LEU B 83 VAL B 89 ALA B 90 SITE 3 AC2 15 TRP B 109 PHE B 189 SER B 191 LEU B 193 SITE 4 AC2 15 GLU B 194 8N4 B 202 HOH B 313 SITE 1 AC3 9 ARG A 82 LEU A 83 SER A 87 8N4 A 201 SITE 2 AC3 9 HOH A 307 LEU B 47 LEU B 140 8N4 B 201 SITE 3 AC3 9 HOH B 318 CRYST1 73.400 96.840 119.080 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013624 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010326 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008398 0.00000