HEADER HYDROLASE, TRANSFERASE 14-MAR-17 5V5G TITLE OTU PROTEASE OF CRIMEAN CONGO HEMORRHAGIC FEVER VIRUS BOUND TO TITLE 2 UBIQUITIN VARIANT CC.4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE L; COMPND 3 CHAIN: A, C; COMPND 4 SYNONYM: PROTEIN L,LARGE STRUCTURAL PROTEIN,REPLICASE,TRANSCRIPTASE; COMPND 5 EC: 3.4.19.12,2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: UBIQUITIN VARIANT CC.4; COMPND 9 CHAIN: B, D; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRIMEAN-CONGO HEMORRHAGIC FEVER VIRUS (STRAIN SOURCE 3 NIGERIA/IBAR10200/1970); SOURCE 4 ORGANISM_COMMON: CCHFV; SOURCE 5 ORGANISM_TAXID: 652961; SOURCE 6 STRAIN: NIGERIA/IBAR10200/1970; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 13 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS OVARIAN TUMOR DOMAIN PROTEASE, DEUBIQUITINASE, UBIQUITIN VARIANT, KEYWDS 2 HYDROLASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.KHARE,B.L.MARK REVDAT 5 04-OCT-23 5V5G 1 REMARK REVDAT 4 08-JAN-20 5V5G 1 REMARK REVDAT 3 20-SEP-17 5V5G 1 REMARK REVDAT 2 07-JUN-17 5V5G 1 JRNL REVDAT 1 10-MAY-17 5V5G 0 JRNL AUTH W.ZHANG,B.A.BAILEY-ELKIN,R.C.M.KNAAP,B.KHARE,T.J.DALEBOUT, JRNL AUTH 2 G.G.JOHNSON,P.B.VAN KASTEREN,N.J.MCLEISH,J.GU,W.HE, JRNL AUTH 3 M.KIKKERT,B.L.MARK,S.S.SIDHU JRNL TITL POTENT AND SELECTIVE INHIBITION OF PATHOGENIC VIRUSES BY JRNL TITL 2 ENGINEERED UBIQUITIN VARIANTS. JRNL REF PLOS PATHOG. V. 13 06372 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 28542609 JRNL DOI 10.1371/JOURNAL.PPAT.1006372 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2328: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 34878 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.1819 - 5.0595 0.97 2554 155 0.1739 0.2204 REMARK 3 2 5.0595 - 4.0166 0.98 2398 146 0.1360 0.1641 REMARK 3 3 4.0166 - 3.5090 0.98 2380 144 0.1571 0.2013 REMARK 3 4 3.5090 - 3.1883 0.99 2367 143 0.1679 0.2259 REMARK 3 5 3.1883 - 2.9598 0.99 2360 144 0.1972 0.2498 REMARK 3 6 2.9598 - 2.7853 0.99 2326 140 0.1944 0.2812 REMARK 3 7 2.7853 - 2.6458 0.99 2351 143 0.1909 0.2597 REMARK 3 8 2.6458 - 2.5307 0.99 2314 140 0.1900 0.2505 REMARK 3 9 2.5307 - 2.4332 1.00 2337 143 0.1804 0.2521 REMARK 3 10 2.4332 - 2.3493 0.99 2311 140 0.1897 0.2639 REMARK 3 11 2.3493 - 2.2758 0.99 2287 139 0.1939 0.2970 REMARK 3 12 2.2758 - 2.2108 0.99 2273 139 0.2089 0.2587 REMARK 3 13 2.2108 - 2.1526 0.99 2315 142 0.2164 0.3037 REMARK 3 14 2.1526 - 2.1001 0.99 2307 140 0.2461 0.3312 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3982 REMARK 3 ANGLE : 1.040 5387 REMARK 3 CHIRALITY : 0.057 599 REMARK 3 PLANARITY : 0.007 686 REMARK 3 DIHEDRAL : 13.868 2362 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5V5G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000223400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34979 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 47.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.92700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3PT2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG3350, 0.1 M TRIS PH 7.0, REMARK 280 0.2 M SODIUM CHLORIDE AND SILVER BULLET FORMULATION #G1 (0.16% REMARK 280 (W/V) EACH OF 5-SULFOSALICYLIC ACID DEHYDRATE, DODECANEDIOIC REMARK 280 ACID, HIPPURIC ACID, MELLITIC ACID, OXALACETIC ACID, SUBERIC REMARK 280 ACID AND 0.02 M HEPES SODIUM PH 6.8), VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 138.78900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 32.15600 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 32.15600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 208.18350 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 32.15600 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 32.15600 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 69.39450 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 32.15600 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 32.15600 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 208.18350 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 32.15600 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 32.15600 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 69.39450 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 138.78900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 163 REMARK 465 ASP A 164 REMARK 465 THR A 165 REMARK 465 ARG A 166 REMARK 465 GLU A 167 REMARK 465 ALA A 168 REMARK 465 LEU A 169 REMARK 465 SER A 170 REMARK 465 LEU A 171 REMARK 465 MET A 172 REMARK 465 ASP A 173 REMARK 465 ARG A 174 REMARK 465 VAL A 175 REMARK 465 ILE A 176 REMARK 465 ALA A 177 REMARK 465 VAL A 178 REMARK 465 ASP A 179 REMARK 465 GLN A 180 REMARK 465 LEU A 181 REMARK 465 THR A 182 REMARK 465 SER A 183 REMARK 465 MET B -26 REMARK 465 ALA B -25 REMARK 465 HIS B -24 REMARK 465 HIS B -23 REMARK 465 HIS B -22 REMARK 465 HIS B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 VAL B -18 REMARK 465 THR B -17 REMARK 465 SER B -16 REMARK 465 LEU B -15 REMARK 465 TYR B -14 REMARK 465 LYS B -13 REMARK 465 LYS B -12 REMARK 465 ALA B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 THR B -8 REMARK 465 ASP B -7 REMARK 465 TYR B -6 REMARK 465 LYS B -5 REMARK 465 ASP B -4 REMARK 465 ASP B -3 REMARK 465 VAL B 78 REMARK 465 THR C 163 REMARK 465 ASP C 164 REMARK 465 THR C 165 REMARK 465 ARG C 166 REMARK 465 GLU C 167 REMARK 465 ALA C 168 REMARK 465 LEU C 169 REMARK 465 SER C 170 REMARK 465 LEU C 171 REMARK 465 MET C 172 REMARK 465 ASP C 173 REMARK 465 ARG C 174 REMARK 465 VAL C 175 REMARK 465 ILE C 176 REMARK 465 ALA C 177 REMARK 465 VAL C 178 REMARK 465 ASP C 179 REMARK 465 GLN C 180 REMARK 465 LEU C 181 REMARK 465 THR C 182 REMARK 465 SER C 183 REMARK 465 MET D -26 REMARK 465 ALA D -25 REMARK 465 HIS D -24 REMARK 465 HIS D -23 REMARK 465 HIS D -22 REMARK 465 HIS D -21 REMARK 465 HIS D -20 REMARK 465 HIS D -19 REMARK 465 VAL D -18 REMARK 465 THR D -17 REMARK 465 SER D -16 REMARK 465 LEU D -15 REMARK 465 TYR D -14 REMARK 465 LYS D -13 REMARK 465 LYS D -12 REMARK 465 ALA D -11 REMARK 465 GLY D -10 REMARK 465 SER D -9 REMARK 465 THR D -8 REMARK 465 ASP D -7 REMARK 465 TYR D -6 REMARK 465 LYS D -5 REMARK 465 ASP D -4 REMARK 465 ASP D -3 REMARK 465 ASP D -2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A -2 N REMARK 470 ARG A 5 NE CZ NH1 NH2 REMARK 470 GLN A 74 CG CD OE1 NE2 REMARK 470 GLU A 75 CD OE1 OE2 REMARK 470 ARG A 92 NE CZ NH1 NH2 REMARK 470 ASP A 96 CG OD1 OD2 REMARK 470 ASP B -2 CG OD1 OD2 REMARK 470 ASP B -1 CG OD1 OD2 REMARK 470 LYS B 0 CE NZ REMARK 470 GLU B 24 CG CD OE1 OE2 REMARK 470 LYS B 48 CD CE NZ REMARK 470 SER C 124 OG REMARK 470 ASP C 125 CG OD1 OD2 REMARK 470 ASP D -1 CG OD1 OD2 REMARK 470 LYS D 0 CG CD CE NZ REMARK 470 GLU D 24 CD OE1 OE2 REMARK 470 ARG D 54 NE CZ NH1 NH2 REMARK 470 GLN D 62 CD OE1 NE2 REMARK 470 LYS D 63 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR B 68 O HOH B 201 1.51 REMARK 500 HD21 ASN C 52 O HOH C 302 1.56 REMARK 500 O ASP A 2 HG SER A 6 1.58 REMARK 500 O HOH A 375 O HOH B 225 2.07 REMARK 500 O HOH C 355 O HOH C 377 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG D 42 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 55 0.66 -66.10 REMARK 500 GLN A 149 -54.22 69.82 REMARK 500 ASN C 20 54.35 -141.13 REMARK 500 PRO C 21 -178.17 -68.85 REMARK 500 ALA C 122 -97.86 -96.52 REMARK 500 SER C 124 -137.79 38.12 REMARK 500 ASP C 125 53.61 -101.70 REMARK 500 GLN C 149 -53.88 67.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 102 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5V5H RELATED DB: PDB REMARK 900 RELATED ID: 5V5I RELATED DB: PDB DBREF 5V5G A 1 183 UNP Q6TQR6 L_CCHFI 1 183 DBREF 5V5G B -26 78 PDB 5V5G 5V5G -26 78 DBREF 5V5G C 1 183 UNP Q6TQR6 L_CCHFI 1 183 DBREF 5V5G D -26 78 PDB 5V5G 5V5G -26 78 SEQADV 5V5G GLY A -2 UNP Q6TQR6 EXPRESSION TAG SEQADV 5V5G PRO A -1 UNP Q6TQR6 EXPRESSION TAG SEQADV 5V5G GLY A 0 UNP Q6TQR6 EXPRESSION TAG SEQADV 5V5G GLY C -2 UNP Q6TQR6 EXPRESSION TAG SEQADV 5V5G PRO C -1 UNP Q6TQR6 EXPRESSION TAG SEQADV 5V5G GLY C 0 UNP Q6TQR6 EXPRESSION TAG SEQRES 1 A 186 GLY PRO GLY MET ASP PHE LEU ARG SER LEU ASP TRP THR SEQRES 2 A 186 GLN VAL ILE ALA GLY GLN TYR VAL SER ASN PRO ARG PHE SEQRES 3 A 186 ASN ILE SER ASP TYR PHE GLU ILE VAL ARG GLN PRO GLY SEQRES 4 A 186 ASP GLY ASN CSX PHE TYR HIS SER ILE ALA GLU LEU THR SEQRES 5 A 186 MET PRO ASN LYS THR ASP HIS SER TYR HIS TYR ILE LYS SEQRES 6 A 186 ARG LEU THR GLU SER ALA ALA ARG LYS TYR TYR GLN GLU SEQRES 7 A 186 GLU PRO GLU ALA ARG LEU VAL GLY LEU SER LEU GLU ASP SEQRES 8 A 186 TYR LEU LYS ARG MET LEU SER ASP ASN GLU TRP GLY SER SEQRES 9 A 186 THR LEU GLU ALA SER MET LEU ALA LYS GLU MET GLY ILE SEQRES 10 A 186 THR ILE ILE ILE TRP THR VAL ALA ALA SER ASP GLU VAL SEQRES 11 A 186 GLU ALA GLY ILE LYS PHE GLY ASP GLY ASP VAL PHE THR SEQRES 12 A 186 ALA VAL ASN LEU LEU HIS SER GLY GLN THR HIS PHE ASP SEQRES 13 A 186 ALA LEU ARG ILE LEU PRO GLN PHE GLU THR ASP THR ARG SEQRES 14 A 186 GLU ALA LEU SER LEU MET ASP ARG VAL ILE ALA VAL ASP SEQRES 15 A 186 GLN LEU THR SER SEQRES 1 B 105 MET ALA HIS HIS HIS HIS HIS HIS VAL THR SER LEU TYR SEQRES 2 B 105 LYS LYS ALA GLY SER THR ASP TYR LYS ASP ASP ASP ASP SEQRES 3 B 105 LYS MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR SEQRES 4 B 105 ILE THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN SEQRES 5 B 105 VAL LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO SEQRES 6 B 105 ASP GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU SEQRES 7 B 105 ASP GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS LEU SEQRES 8 B 105 SER LEU LEU TYR LEU VAL TRP ARG LEU GLY VAL PRO TRP SEQRES 9 B 105 VAL SEQRES 1 C 186 GLY PRO GLY MET ASP PHE LEU ARG SER LEU ASP TRP THR SEQRES 2 C 186 GLN VAL ILE ALA GLY GLN TYR VAL SER ASN PRO ARG PHE SEQRES 3 C 186 ASN ILE SER ASP TYR PHE GLU ILE VAL ARG GLN PRO GLY SEQRES 4 C 186 ASP GLY ASN CSX PHE TYR HIS SER ILE ALA GLU LEU THR SEQRES 5 C 186 MET PRO ASN LYS THR ASP HIS SER TYR HIS TYR ILE LYS SEQRES 6 C 186 ARG LEU THR GLU SER ALA ALA ARG LYS TYR TYR GLN GLU SEQRES 7 C 186 GLU PRO GLU ALA ARG LEU VAL GLY LEU SER LEU GLU ASP SEQRES 8 C 186 TYR LEU LYS ARG MET LEU SER ASP ASN GLU TRP GLY SER SEQRES 9 C 186 THR LEU GLU ALA SER MET LEU ALA LYS GLU MET GLY ILE SEQRES 10 C 186 THR ILE ILE ILE TRP THR VAL ALA ALA SER ASP GLU VAL SEQRES 11 C 186 GLU ALA GLY ILE LYS PHE GLY ASP GLY ASP VAL PHE THR SEQRES 12 C 186 ALA VAL ASN LEU LEU HIS SER GLY GLN THR HIS PHE ASP SEQRES 13 C 186 ALA LEU ARG ILE LEU PRO GLN PHE GLU THR ASP THR ARG SEQRES 14 C 186 GLU ALA LEU SER LEU MET ASP ARG VAL ILE ALA VAL ASP SEQRES 15 C 186 GLN LEU THR SER SEQRES 1 D 105 MET ALA HIS HIS HIS HIS HIS HIS VAL THR SER LEU TYR SEQRES 2 D 105 LYS LYS ALA GLY SER THR ASP TYR LYS ASP ASP ASP ASP SEQRES 3 D 105 LYS MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR SEQRES 4 D 105 ILE THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN SEQRES 5 D 105 VAL LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO SEQRES 6 D 105 ASP GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU SEQRES 7 D 105 ASP GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS LEU SEQRES 8 D 105 SER LEU LEU TYR LEU VAL TRP ARG LEU GLY VAL PRO TRP SEQRES 9 D 105 VAL MODRES 5V5G CSX A 40 CYS MODIFIED RESIDUE MODRES 5V5G CSX C 40 CYS MODIFIED RESIDUE HET CSX A 40 12 HET CSX C 40 12 HET EDO A 201 20 HET NA A 202 1 HET EDO B 101 10 HET EDO B 102 10 HET NA C 201 1 HET EDO C 202 20 HET NA C 203 1 HETNAM CSX S-OXY CYSTEINE HETNAM EDO 1,2-ETHANEDIOL HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 CSX 2(C3 H7 N O3 S) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 6 NA 3(NA 1+) FORMUL 12 HOH *212(H2 O) HELIX 1 AA1 GLY A -2 SER A 6 1 9 HELIX 2 AA2 ASN A 24 TYR A 28 1 5 HELIX 3 AA3 ASN A 39 MET A 50 1 12 HELIX 4 AA4 SER A 57 TYR A 73 1 17 HELIX 5 AA5 GLN A 74 PRO A 77 5 4 HELIX 6 AA6 GLU A 78 GLY A 83 1 6 HELIX 7 AA7 SER A 85 LEU A 94 1 10 HELIX 8 AA8 SER A 101 GLY A 113 1 13 HELIX 9 AA9 PRO A 159 GLU A 162 5 4 HELIX 10 AB1 THR B 22 GLY B 35 1 14 HELIX 11 AB2 PRO B 37 ASP B 39 5 3 HELIX 12 AB3 LEU B 56 ASN B 60 5 5 HELIX 13 AB4 PRO C -1 SER C 6 1 8 HELIX 14 AB5 ILE C 25 TYR C 28 1 4 HELIX 15 AB6 ASN C 39 MET C 50 1 12 HELIX 16 AB7 SER C 57 TYR C 73 1 17 HELIX 17 AB8 GLN C 74 VAL C 82 5 9 HELIX 18 AB9 SER C 85 SER C 95 1 11 HELIX 19 AC1 SER C 101 MET C 112 1 12 HELIX 20 AC2 PRO C 159 GLU C 162 5 4 HELIX 21 AC3 THR D 22 GLY D 35 1 14 HELIX 22 AC4 PRO D 37 ASP D 39 5 3 SHEET 1 AA1 7 THR A 10 ILE A 13 0 SHEET 2 AA1 7 GLN A 16 SER A 19 -1 O GLN A 16 N ILE A 13 SHEET 3 AA1 7 VAL A 127 PHE A 133 -1 O LYS A 132 N TYR A 17 SHEET 4 AA1 7 ILE A 116 VAL A 121 -1 N THR A 120 O GLU A 128 SHEET 5 AA1 7 VAL A 142 SER A 147 1 O LEU A 144 N ILE A 117 SHEET 6 AA1 7 HIS A 151 ILE A 157 -1 O ASP A 153 N LEU A 145 SHEET 7 AA1 7 PHE A 29 VAL A 32 -1 N GLU A 30 O ARG A 156 SHEET 1 AA2 5 THR B 12 VAL B 17 0 SHEET 2 AA2 5 MET B 1 THR B 7 -1 N MET B 1 O VAL B 17 SHEET 3 AA2 5 LEU B 66 TRP B 71 1 O LEU B 67 N PHE B 4 SHEET 4 AA2 5 GLN B 41 PHE B 45 -1 N ILE B 44 O TYR B 68 SHEET 5 AA2 5 LYS B 48 GLN B 49 -1 O LYS B 48 N PHE B 45 SHEET 1 AA3 4 THR C 10 ILE C 13 0 SHEET 2 AA3 4 GLN C 16 SER C 19 -1 O VAL C 18 N THR C 10 SHEET 3 AA3 4 GLU C 126 PHE C 133 -1 O LYS C 132 N TYR C 17 SHEET 4 AA3 4 PHE C 23 ASN C 24 -1 N PHE C 23 O VAL C 127 SHEET 1 AA4 7 THR C 10 ILE C 13 0 SHEET 2 AA4 7 GLN C 16 SER C 19 -1 O VAL C 18 N THR C 10 SHEET 3 AA4 7 GLU C 126 PHE C 133 -1 O LYS C 132 N TYR C 17 SHEET 4 AA4 7 ILE C 116 VAL C 121 -1 N ILE C 116 O PHE C 133 SHEET 5 AA4 7 VAL C 142 SER C 147 1 O HIS C 146 N TRP C 119 SHEET 6 AA4 7 HIS C 151 ILE C 157 -1 O ASP C 153 N LEU C 145 SHEET 7 AA4 7 PHE C 29 VAL C 32 -1 N GLU C 30 O ARG C 156 SHEET 1 AA5 5 THR D 12 VAL D 17 0 SHEET 2 AA5 5 MET D 1 THR D 7 -1 N VAL D 5 O ILE D 13 SHEET 3 AA5 5 LEU D 66 TRP D 71 1 O LEU D 67 N LYS D 6 SHEET 4 AA5 5 GLN D 41 PHE D 45 -1 N ARG D 42 O VAL D 70 SHEET 5 AA5 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 LINK C ASN A 39 N CSX A 40 1555 1555 1.32 LINK C CSX A 40 N PHE A 41 1555 1555 1.33 LINK C ASN C 39 N CSX C 40 1555 1555 1.34 LINK C CSX C 40 N PHE C 41 1555 1555 1.33 SITE 1 AC1 7 ARG A 92 MET A 93 GLU A 98 TRP A 99 SITE 2 AC1 7 SER A 101 GLU A 104 ARG B 72 SITE 1 AC2 4 GLY A -2 GLY A 0 MET A 1 PHE D 4 SITE 1 AC3 4 HOH A 308 LYS B 27 LEU B 50 ASP B 52 SITE 1 AC4 5 ASN B 60 GLN B 62 HOH B 222 ALA C 79 SITE 2 AC4 5 LEU C 84 SITE 1 AC5 3 ARG A 63 TYR C 60 ARG C 63 SITE 1 AC6 7 ARG C 92 MET C 93 GLU C 98 TRP C 99 SITE 2 AC6 7 SER C 101 GLU C 104 ARG D 72 SITE 1 AC7 4 GLY C -2 GLY C 0 MET C 1 PHE C 161 CRYST1 64.312 64.312 277.578 90.00 90.00 90.00 P 43 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015549 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015549 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003603 0.00000