HEADER CHAPERONE, HYDROLASE 29-MAR-17 5VBA TITLE STRUCTURE OF ESPG1 CHAPERONE FROM THE TYPE VII (ESX-1) SECRETION TITLE 2 SYSTEM DETERMINED WITH THE ASSISTANCE OF N-TERMINAL T4 LYSOZYME TITLE 3 FUSION COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOZYME, ESX-1 SECRETION-ASSOCIATED PROTEIN ESPG1 CHIMERA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: T4 LYSOZYME (UNP RESIDUES 2-162) + ESPG1 (UNP RESIDUES 16- COMPND 5 271); COMPND 6 SYNONYM: ESPG1; COMPND 7 EC: 3.2.1.17; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4, MYCOBACTERIUM KANSASII SOURCE 3 ATCC 12478; SOURCE 4 ORGANISM_TAXID: 10665, 557599; SOURCE 5 GENE: E, T4TP126; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ESX-1, TYPE VII SECRETION SYSTEM, RV3866, SNM5, PROTEIN SECRETION, KEYWDS 2 CHAPERONE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.V.KOROTKOV REVDAT 6 04-OCT-23 5VBA 1 REMARK REVDAT 5 11-DEC-19 5VBA 1 REMARK REVDAT 4 30-JAN-19 5VBA 1 JRNL REVDAT 3 28-NOV-18 5VBA 1 JRNL REVDAT 2 13-SEP-17 5VBA 1 REMARK REVDAT 1 05-JUL-17 5VBA 0 JRNL AUTH A.T.TUUKKANEN,D.FREIRE,S.CHAN,M.A.ARBING,R.W.REED,T.J.EVANS, JRNL AUTH 2 G.ZENKEVICIUTE,J.KIM,S.KAHNG,M.R.SAWAYA,C.T.CHATON, JRNL AUTH 3 M.WILMANNS,D.EISENBERG,A.H.A.PARRET,K.V.KOROTKOV JRNL TITL STRUCTURAL VARIABILITY OF ESPG CHAPERONES FROM MYCOBACTERIAL JRNL TITL 2 ESX-1, ESX-3, AND ESX-5 TYPE VII SECRETION SYSTEMS. JRNL REF J. MOL. BIOL. V. 431 289 2019 JRNL REFN ESSN 1089-8638 JRNL PMID 30419243 JRNL DOI 10.1016/J.JMB.2018.11.003 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_2722 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.920 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 39576 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.740 REMARK 3 FREE R VALUE TEST SET COUNT : 3530 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.5560 - 6.6346 0.98 2785 166 0.1719 0.1965 REMARK 3 2 6.6346 - 5.2671 0.99 2846 129 0.1954 0.2540 REMARK 3 3 5.2671 - 4.6016 0.99 2827 131 0.1650 0.2129 REMARK 3 4 4.6016 - 4.1810 0.99 2833 163 0.1680 0.2053 REMARK 3 5 4.1810 - 3.8814 0.98 2777 158 0.1889 0.2243 REMARK 3 6 3.8814 - 3.6526 0.97 2783 132 0.2070 0.2319 REMARK 3 7 3.6526 - 3.4697 0.98 2797 132 0.2070 0.2543 REMARK 3 8 3.4697 - 3.3186 0.97 2805 126 0.2256 0.2722 REMARK 3 9 3.3186 - 3.1909 0.99 2844 137 0.2300 0.2420 REMARK 3 10 3.1909 - 3.0808 1.00 2860 129 0.2300 0.2332 REMARK 3 11 3.0808 - 2.9845 1.00 2844 151 0.2375 0.3252 REMARK 3 12 2.9845 - 2.8991 1.00 2844 146 0.2357 0.2439 REMARK 3 13 2.8991 - 2.8228 1.00 2878 133 0.2574 0.3106 REMARK 3 14 2.8228 - 2.7540 1.00 2838 159 0.2518 0.3184 REMARK 3 15 2.7540 - 2.6913 1.00 2857 150 0.2574 0.3146 REMARK 3 16 2.6913 - 2.6341 0.97 2819 114 0.2936 0.3582 REMARK 3 17 2.6341 - 2.5814 1.00 2835 127 0.2565 0.3260 REMARK 3 18 2.5814 - 2.5327 1.00 2849 141 0.2767 0.2819 REMARK 3 19 2.5327 - 2.4874 1.00 2915 156 0.2768 0.3323 REMARK 3 20 2.4874 - 2.4453 1.00 2834 133 0.2902 0.3500 REMARK 3 21 2.4453 - 2.4058 1.00 2841 152 0.2922 0.3540 REMARK 3 22 2.4058 - 2.3688 1.00 2854 141 0.2893 0.3023 REMARK 3 23 2.3688 - 2.3340 1.00 2862 139 0.3075 0.2960 REMARK 3 24 2.3340 - 2.3011 1.00 2823 153 0.3095 0.3987 REMARK 3 25 2.3011 - 2.2700 1.00 2879 132 0.3296 0.3307 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.260 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6402 REMARK 3 ANGLE : 0.657 8699 REMARK 3 CHIRALITY : 0.043 1015 REMARK 3 PLANARITY : 0.005 1120 REMARK 3 DIHEDRAL : 13.174 3835 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: (CHAIN A AND (RESID 16 THROUGH 46 OR REMARK 3 RESID 56 THROUGH 160 OR RESID 165 THROUGH REMARK 3 1162)) REMARK 3 SELECTION : (CHAIN B AND (RESID 16 THROUGH 104 OR REMARK 3 RESID 107 THROUGH 170 OR RESID 180 REMARK 3 THROUGH 270 OR RESID 995 THROUGH 1162)) REMARK 3 ATOM PAIRS NUMBER : 4645 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VBA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-MAR-17. REMARK 100 THE DEPOSITION ID IS D_1000227150. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOVEMBER 3, 2014 REMARK 200 DATA SCALING SOFTWARE : XSCALE NOVEMBER 3, 2014 REMARK 200 BUILT=20141118 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39581 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 59.536 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.341 REMARK 200 R MERGE (I) : 0.09700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.54 REMARK 200 R MERGE FOR SHELL (I) : 1.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.740 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.7 REMARK 200 STARTING MODEL: PDB ENTRIES 4GBR & 4L4W REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BICINE, PH 9.0, 1.0 M LITHIUM REMARK 280 CHLORIDE, 10% PEG6000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.07000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.84500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.07000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.84500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 982 REMARK 465 GLY A 983 REMARK 465 SER A 984 REMARK 465 SER A 985 REMARK 465 HIS A 986 REMARK 465 HIS A 987 REMARK 465 HIS A 988 REMARK 465 HIS A 989 REMARK 465 HIS A 990 REMARK 465 HIS A 991 REMARK 465 SER A 992 REMARK 465 SER A 993 REMARK 465 GLY A 994 REMARK 465 ASN A 47 REMARK 465 ILE A 48 REMARK 465 PRO A 49 REMARK 465 GLN A 50 REMARK 465 GLY A 105 REMARK 465 GLY A 106 REMARK 465 THR A 171 REMARK 465 THR A 172 REMARK 465 ALA A 173 REMARK 465 ALA A 174 REMARK 465 GLN A 175 REMARK 465 LEU A 176 REMARK 465 THR A 177 REMARK 465 ARG A 178 REMARK 465 TYR A 179 REMARK 465 ASP A 271 REMARK 465 MET B 982 REMARK 465 GLY B 983 REMARK 465 SER B 984 REMARK 465 SER B 985 REMARK 465 HIS B 986 REMARK 465 HIS B 987 REMARK 465 HIS B 988 REMARK 465 HIS B 989 REMARK 465 HIS B 990 REMARK 465 HIS B 991 REMARK 465 ASN B 47 REMARK 465 ILE B 48 REMARK 465 PRO B 49 REMARK 465 GLN B 50 REMARK 465 ASP B 51 REMARK 465 ASP B 52 REMARK 465 LEU B 53 REMARK 465 ARG B 54 REMARK 465 GLU B 55 REMARK 465 THR B 161 REMARK 465 GLY B 162 REMARK 465 ILE B 163 REMARK 465 ALA B 164 REMARK 465 ALA B 173 REMARK 465 ALA B 174 REMARK 465 GLN B 175 REMARK 465 LEU B 176 REMARK 465 THR B 177 REMARK 465 ARG B 178 REMARK 465 TYR B 179 REMARK 465 ASP B 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O LYS A 1019 HE2 HIS A 73 1.54 REMARK 500 O GLY A 150 HH22 ARG A 229 1.59 REMARK 500 OG SER A 165 O LEU A 241 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 117 -118.27 57.72 REMARK 500 SER A 165 -126.93 29.00 REMARK 500 SER B 993 -52.14 67.46 REMARK 500 ARG B 45 151.14 -48.66 REMARK 500 ASP B 117 -119.32 56.83 REMARK 500 SER B 156 -71.17 -55.21 REMARK 500 GLU B 158 77.48 -103.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 1205 DBREF 5VBA A 1002 1162 UNP D9IEF7 D9IEF7_BPT4 2 162 DBREF 5VBA A 16 271 UNP X7YCN8 X7YCN8_MYCKA 16 271 DBREF 5VBA B 1002 1162 UNP D9IEF7 D9IEF7_BPT4 2 162 DBREF 5VBA B 16 271 UNP X7YCN8 X7YCN8_MYCKA 16 271 SEQADV 5VBA MET A 982 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY A 983 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER A 984 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER A 985 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 986 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 987 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 988 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 989 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 990 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS A 991 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER A 992 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER A 993 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY A 994 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLU A 995 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA ASN A 996 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA LEU A 997 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA TYR A 998 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA PHE A 999 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLN A 1000 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY A 1001 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA THR A 1054 UNP D9IEF7 CYS 54 ENGINEERED MUTATION SEQADV 5VBA ALA A 1097 UNP D9IEF7 CYS 97 ENGINEERED MUTATION SEQADV 5VBA ALA A 1162 UNP D9IEF7 LYS 162 ENGINEERED MUTATION SEQADV 5VBA MET A 16 UNP X7YCN8 VAL 16 ENGINEERED MUTATION SEQADV 5VBA ALA A 114 UNP X7YCN8 CYS 114 ENGINEERED MUTATION SEQADV 5VBA ALA A 170 UNP X7YCN8 CYS 170 ENGINEERED MUTATION SEQADV 5VBA MET B 982 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY B 983 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER B 984 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER B 985 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 986 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 987 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 988 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 989 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 990 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA HIS B 991 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER B 992 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA SER B 993 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY B 994 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLU B 995 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA ASN B 996 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA LEU B 997 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA TYR B 998 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA PHE B 999 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLN B 1000 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA GLY B 1001 UNP D9IEF7 EXPRESSION TAG SEQADV 5VBA THR B 1054 UNP D9IEF7 CYS 54 ENGINEERED MUTATION SEQADV 5VBA ALA B 1097 UNP D9IEF7 CYS 97 ENGINEERED MUTATION SEQADV 5VBA ALA B 1162 UNP D9IEF7 LYS 162 ENGINEERED MUTATION SEQADV 5VBA MET B 16 UNP X7YCN8 VAL 16 ENGINEERED MUTATION SEQADV 5VBA ALA B 114 UNP X7YCN8 CYS 114 ENGINEERED MUTATION SEQADV 5VBA ALA B 170 UNP X7YCN8 CYS 170 ENGINEERED MUTATION SEQRES 1 A 437 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 437 GLU ASN LEU TYR PHE GLN GLY ASN ILE PHE GLU MET LEU SEQRES 3 A 437 ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR LYS ASP SEQRES 4 A 437 THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS LEU LEU SEQRES 5 A 437 THR LYS SER PRO SER LEU ASN ALA ALA LYS SER GLU LEU SEQRES 6 A 437 ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL ILE THR SEQRES 7 A 437 LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP SEQRES 8 A 437 ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS SEQRES 9 A 437 PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA SEQRES 10 A 437 LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL SEQRES 11 A 437 ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS SEQRES 12 A 437 ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG SEQRES 13 A 437 TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE SEQRES 14 A 437 THR THR PHE ARG THR GLY THR TRP ASP ALA TYR ALA MET SEQRES 15 A 437 VAL GLY VAL GLU VAL THR ILE ASP GLY MET LEU VAL LEU SEQRES 16 A 437 ALA ASP ARG LEU HIS LEU VAL ASP PHE PRO VAL ALA LEU SEQRES 17 A 437 GLY ILE ARG PRO ASN ILE PRO GLN ASP ASP LEU ARG GLU SEQRES 18 A 437 ILE VAL TRP ASP GLN VAL ARG ARG ASP LEU THR ALA GLN SEQRES 19 A 437 GLY VAL LEU ASP HIS ASN GLY TYR PRO HIS PRO THR VAL SEQRES 20 A 437 ALA SER MET VAL ASP THR LEU SER ARG PRO ASP ARG THR SEQRES 21 A 437 LEU GLU ALA ARG TRP TRP ARG ARG ASP VAL GLY GLY VAL SEQRES 22 A 437 MET VAL ARG PHE VAL VAL ALA ARG LYS ASP ASP ARG HIS SEQRES 23 A 437 VAL ILE ALA VAL ARG ASN GLY ASP LEU LEU VAL LEU GLN SEQRES 24 A 437 LEU VAL ALA PRO GLN VAL GLY LEU ALA GLY MET VAL THR SEQRES 25 A 437 ALA VAL LEU GLY THR ALA ASP PRO ALA SER VAL GLU PRO SEQRES 26 A 437 LEU THR GLY ILE ALA SER GLU LEU ALA GLU ALA THR THR SEQRES 27 A 437 ALA ALA GLN LEU THR ARG TYR GLY LEU ALA PRO THR ALA SEQRES 28 A 437 ALA ARG ILE TYR THR GLU ILE VAL SER ASN PRO ASP SER SEQRES 29 A 437 TRP VAL GLU ILE VAL ALA SER GLN ARG HIS PRO GLY GLY SEQRES 30 A 437 THR THR THR HIS THR LYS ALA ALA ALA GLY VAL LEU ASP SEQRES 31 A 437 SER ALA HIS GLY ARG VAL VAL SER LEU PRO ARG ILE VAL SEQRES 32 A 437 SER GLY GLU LEU TYR GLY SER PHE LEU PRO GLY THR PRO SEQRES 33 A 437 GLN ASN LEU GLN LEU ALA LEU ASP ALA LEU VAL GLU LEU SEQRES 34 A 437 LEU PRO ALA GLY SER TRP LEU ASP SEQRES 1 B 437 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 437 GLU ASN LEU TYR PHE GLN GLY ASN ILE PHE GLU MET LEU SEQRES 3 B 437 ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR LYS ASP SEQRES 4 B 437 THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS LEU LEU SEQRES 5 B 437 THR LYS SER PRO SER LEU ASN ALA ALA LYS SER GLU LEU SEQRES 6 B 437 ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL ILE THR SEQRES 7 B 437 LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP VAL ASP SEQRES 8 B 437 ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS LEU LYS SEQRES 9 B 437 PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG ALA ALA SEQRES 10 B 437 LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR GLY VAL SEQRES 11 B 437 ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN GLN LYS SEQRES 12 B 437 ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SER ARG SEQRES 13 B 437 TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG VAL ILE SEQRES 14 B 437 THR THR PHE ARG THR GLY THR TRP ASP ALA TYR ALA MET SEQRES 15 B 437 VAL GLY VAL GLU VAL THR ILE ASP GLY MET LEU VAL LEU SEQRES 16 B 437 ALA ASP ARG LEU HIS LEU VAL ASP PHE PRO VAL ALA LEU SEQRES 17 B 437 GLY ILE ARG PRO ASN ILE PRO GLN ASP ASP LEU ARG GLU SEQRES 18 B 437 ILE VAL TRP ASP GLN VAL ARG ARG ASP LEU THR ALA GLN SEQRES 19 B 437 GLY VAL LEU ASP HIS ASN GLY TYR PRO HIS PRO THR VAL SEQRES 20 B 437 ALA SER MET VAL ASP THR LEU SER ARG PRO ASP ARG THR SEQRES 21 B 437 LEU GLU ALA ARG TRP TRP ARG ARG ASP VAL GLY GLY VAL SEQRES 22 B 437 MET VAL ARG PHE VAL VAL ALA ARG LYS ASP ASP ARG HIS SEQRES 23 B 437 VAL ILE ALA VAL ARG ASN GLY ASP LEU LEU VAL LEU GLN SEQRES 24 B 437 LEU VAL ALA PRO GLN VAL GLY LEU ALA GLY MET VAL THR SEQRES 25 B 437 ALA VAL LEU GLY THR ALA ASP PRO ALA SER VAL GLU PRO SEQRES 26 B 437 LEU THR GLY ILE ALA SER GLU LEU ALA GLU ALA THR THR SEQRES 27 B 437 ALA ALA GLN LEU THR ARG TYR GLY LEU ALA PRO THR ALA SEQRES 28 B 437 ALA ARG ILE TYR THR GLU ILE VAL SER ASN PRO ASP SER SEQRES 29 B 437 TRP VAL GLU ILE VAL ALA SER GLN ARG HIS PRO GLY GLY SEQRES 30 B 437 THR THR THR HIS THR LYS ALA ALA ALA GLY VAL LEU ASP SEQRES 31 B 437 SER ALA HIS GLY ARG VAL VAL SER LEU PRO ARG ILE VAL SEQRES 32 B 437 SER GLY GLU LEU TYR GLY SER PHE LEU PRO GLY THR PRO SEQRES 33 B 437 GLN ASN LEU GLN LEU ALA LEU ASP ALA LEU VAL GLU LEU SEQRES 34 B 437 LEU PRO ALA GLY SER TRP LEU ASP HET CL A1201 1 HET CL A1202 1 HET CL A1203 1 HET CL A1204 1 HET CL A1205 1 HET CL B1201 1 HET CL B1202 1 HET CL B1203 1 HET CL B1204 1 HET CL B1205 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 10(CL 1-) FORMUL 13 HOH *56(H2 O) HELIX 1 AA1 ASN A 1002 GLU A 1011 1 10 HELIX 2 AA2 SER A 1038 GLY A 1051 1 14 HELIX 3 AA3 THR A 1059 ARG A 1080 1 22 HELIX 4 AA4 LEU A 1084 LEU A 1091 1 8 HELIX 5 AA5 ASP A 1092 GLY A 1113 1 22 HELIX 6 AA6 PHE A 1114 GLN A 1123 1 10 HELIX 7 AA7 ARG A 1125 ALA A 1134 1 10 HELIX 8 AA8 SER A 1136 THR A 1142 1 7 HELIX 9 AA9 THR A 1142 GLY A 1156 1 15 HELIX 10 AB1 TRP A 1158 TYR A 1161 5 4 HELIX 11 AB2 ILE A 23 HIS A 34 1 12 HELIX 12 AB3 PRO A 39 GLY A 43 5 5 HELIX 13 AB4 ASP A 52 GLN A 68 1 17 HELIX 14 AB5 HIS A 78 SER A 89 1 12 HELIX 15 AB6 GLY A 140 GLY A 150 1 11 HELIX 16 AB7 ALA A 164 ALA A 170 5 7 HELIX 17 AB8 ALA A 182 ASN A 195 1 14 HELIX 18 AB9 THR A 249 LEU A 263 1 15 HELIX 19 AC1 ASN B 1002 GLU B 1011 1 10 HELIX 20 AC2 SER B 1038 GLY B 1051 1 14 HELIX 21 AC3 THR B 1059 ARG B 1080 1 22 HELIX 22 AC4 LEU B 1084 LEU B 1091 1 8 HELIX 23 AC5 ASP B 1092 GLY B 1113 1 22 HELIX 24 AC6 PHE B 1114 GLN B 1123 1 10 HELIX 25 AC7 ARG B 1125 ALA B 1134 1 10 HELIX 26 AC8 SER B 1136 THR B 1142 1 7 HELIX 27 AC9 THR B 1142 GLY B 1156 1 15 HELIX 28 AD1 TRP B 1158 TYR B 1161 5 4 HELIX 29 AD2 ILE B 23 HIS B 34 1 12 HELIX 30 AD3 PRO B 39 GLY B 43 5 5 HELIX 31 AD4 VAL B 57 GLN B 68 1 12 HELIX 32 AD5 HIS B 78 SER B 89 1 12 HELIX 33 AD6 VAL B 139 GLY B 150 1 12 HELIX 34 AD7 GLU B 166 THR B 171 1 6 HELIX 35 AD8 ALA B 182 ASN B 195 1 14 HELIX 36 AD9 THR B 249 GLU B 262 1 14 SHEET 1 AA1 3 ARG A1014 LYS A1019 0 SHEET 2 AA1 3 TYR A1025 GLY A1028 -1 O THR A1026 N TYR A1018 SHEET 3 AA1 3 HIS A1031 THR A1034 -1 O LEU A1033 N TYR A1025 SHEET 1 AA2 7 MET A 16 THR A 22 0 SHEET 2 AA2 7 LEU A 129 VAL A 135 -1 O LEU A 130 N VAL A 21 SHEET 3 AA2 7 ARG A 119 ASN A 126 -1 N HIS A 120 O VAL A 135 SHEET 4 AA2 7 VAL A 109 LYS A 116 -1 N VAL A 112 O ALA A 123 SHEET 5 AA2 7 ARG A 93 ARG A 101 -1 N TRP A 99 O VAL A 109 SHEET 6 AA2 7 SER A 198 ARG A 207 -1 O VAL A 203 N GLU A 96 SHEET 7 AA2 7 THR A 213 HIS A 215 -1 O THR A 214 N GLN A 206 SHEET 1 AA3 9 MET A 16 THR A 22 0 SHEET 2 AA3 9 LEU A 129 VAL A 135 -1 O LEU A 130 N VAL A 21 SHEET 3 AA3 9 ARG A 119 ASN A 126 -1 N HIS A 120 O VAL A 135 SHEET 4 AA3 9 VAL A 109 LYS A 116 -1 N VAL A 112 O ALA A 123 SHEET 5 AA3 9 ARG A 93 ARG A 101 -1 N TRP A 99 O VAL A 109 SHEET 6 AA3 9 SER A 198 ARG A 207 -1 O VAL A 203 N GLU A 96 SHEET 7 AA3 9 ALA A 220 ASP A 224 -1 O ALA A 220 N ILE A 202 SHEET 8 AA3 9 VAL A 230 VAL A 237 -1 O VAL A 230 N LEU A 223 SHEET 9 AA3 9 GLU A 240 PRO A 247 -1 O TYR A 242 N ARG A 235 SHEET 1 AA4 3 ARG B1014 LYS B1019 0 SHEET 2 AA4 3 TYR B1025 GLY B1028 -1 O THR B1026 N TYR B1018 SHEET 3 AA4 3 HIS B1031 THR B1034 -1 O LEU B1033 N TYR B1025 SHEET 1 AA5 7 MET B 16 THR B 22 0 SHEET 2 AA5 7 LEU B 129 VAL B 135 -1 O LEU B 134 N VAL B 17 SHEET 3 AA5 7 ARG B 119 ASN B 126 -1 N ASN B 126 O LEU B 129 SHEET 4 AA5 7 VAL B 107 LYS B 116 -1 N ARG B 110 O ARG B 125 SHEET 5 AA5 7 ARG B 93 ARG B 101 -1 N TRP B 99 O VAL B 109 SHEET 6 AA5 7 SER B 198 ARG B 207 -1 O TRP B 199 N TRP B 100 SHEET 7 AA5 7 THR B 213 HIS B 215 -1 O THR B 214 N GLN B 206 SHEET 1 AA6 9 MET B 16 THR B 22 0 SHEET 2 AA6 9 LEU B 129 VAL B 135 -1 O LEU B 134 N VAL B 17 SHEET 3 AA6 9 ARG B 119 ASN B 126 -1 N ASN B 126 O LEU B 129 SHEET 4 AA6 9 VAL B 107 LYS B 116 -1 N ARG B 110 O ARG B 125 SHEET 5 AA6 9 ARG B 93 ARG B 101 -1 N TRP B 99 O VAL B 109 SHEET 6 AA6 9 SER B 198 ARG B 207 -1 O TRP B 199 N TRP B 100 SHEET 7 AA6 9 ALA B 220 ASP B 224 -1 O ALA B 220 N ILE B 202 SHEET 8 AA6 9 VAL B 230 VAL B 237 -1 O SER B 232 N GLY B 221 SHEET 9 AA6 9 GLU B 240 PRO B 247 -1 O TYR B 242 N ARG B 235 SITE 1 AC1 2 HIS A 73 THR A1021 SITE 1 AC2 3 PHE A1114 SER A1117 ASN A1132 SITE 1 AC3 5 ARG A1125 TRP A1126 ASP A1127 GLU A1128 SITE 2 AC3 5 ARG B 101 SITE 1 AC4 3 THR A1142 ASN A1144 ARG A1145 SITE 1 AC5 2 LYS A 217 ALA A 218 SITE 1 AC6 3 GLN A1000 ASN B1002 ILE B1003 SITE 1 AC7 3 ALA B 136 PRO B 137 GLN B 138 SITE 1 AC8 2 LYS B 217 ALA B 218 SITE 1 AC9 3 THR B1142 ASN B1144 ARG B1145 SITE 1 AD1 4 PHE B1114 THR B1115 ASN B1116 HOH B1321 CRYST1 64.140 81.690 160.020 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015591 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012241 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006249 0.00000