HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-APR-17 5VCV TITLE CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN IN COMPLEX WITH TITLE 2 DASATINIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: MEMBRANE-ASSOCIATED TYROSINE- AND THREONINE-SPECIFIC CDC2- COMPND 3 INHIBITORY KINASE; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 75-362; COMPND 6 SYNONYM: MYT1 KINASE; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PKMYT1, MYT1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS KINASE DOMAIN, CELL CYCLE, TYROSINE- AND THREONINE-SPECIFIC KINASE, KEYWDS 2 MEMBRANE-ASSOCIATED PROTEIN KINASE, TRANSFERASE, INHIBITOR, KEYWDS 3 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.-Y.ZHU,M.P.MARTIN,E.SCHONBRUNN REVDAT 4 04-OCT-23 5VCV 1 REMARK REVDAT 3 11-DEC-19 5VCV 1 REMARK REVDAT 2 11-OCT-17 5VCV 1 JRNL REVDAT 1 23-AUG-17 5VCV 0 JRNL AUTH J.Y.ZHU,R.A.CUELLAR,N.BERNDT,H.E.LEE,S.H.OLESEN,M.P.MARTIN, JRNL AUTH 2 J.T.JENSEN,G.I.GEORG,E.SCHONBRUNN JRNL TITL STRUCTURAL BASIS OF WEE KINASES FUNCTIONALITY AND JRNL TITL 2 INACTIVATION BY DIVERSE SMALL MOLECULE INHIBITORS. JRNL REF J. MED. CHEM. V. 60 7863 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28792760 JRNL DOI 10.1021/ACS.JMEDCHEM.7B00996 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.56 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 22470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.197 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5614 - 3.8316 1.00 2861 151 0.1403 0.1630 REMARK 3 2 3.8316 - 3.0450 1.00 2736 144 0.1544 0.1931 REMARK 3 3 3.0450 - 2.6611 0.99 2680 141 0.1768 0.2376 REMARK 3 4 2.6611 - 2.4183 0.99 2658 140 0.1652 0.2106 REMARK 3 5 2.4183 - 2.2452 0.99 2643 139 0.1579 0.1931 REMARK 3 6 2.2452 - 2.1130 0.97 2596 137 0.1514 0.2259 REMARK 3 7 2.1130 - 2.0073 0.97 2591 136 0.1507 0.1998 REMARK 3 8 2.0073 - 1.9200 0.96 2581 136 0.1681 0.2061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2334 REMARK 3 ANGLE : 1.287 3158 REMARK 3 CHIRALITY : 0.050 326 REMARK 3 PLANARITY : 0.008 417 REMARK 3 DIHEDRAL : 15.119 888 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1438 -10.1987 2.8659 REMARK 3 T TENSOR REMARK 3 T11: 0.1739 T22: 0.2447 REMARK 3 T33: 0.2831 T12: 0.0203 REMARK 3 T13: 0.0231 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 4.2938 L22: 1.9446 REMARK 3 L33: 5.4291 L12: 1.1863 REMARK 3 L13: 4.0745 L23: 2.7153 REMARK 3 S TENSOR REMARK 3 S11: 0.0474 S12: 0.4476 S13: 0.0112 REMARK 3 S21: -0.2564 S22: 0.0756 S23: -0.3098 REMARK 3 S31: 0.1052 S32: 0.8678 S33: -0.1103 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 227 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5296 0.6657 -0.6631 REMARK 3 T TENSOR REMARK 3 T11: 0.1441 T22: 0.1265 REMARK 3 T33: 0.1361 T12: -0.0091 REMARK 3 T13: 0.0151 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 1.6175 L22: 1.0556 REMARK 3 L33: 1.2840 L12: -0.2486 REMARK 3 L13: 0.9790 L23: -0.1504 REMARK 3 S TENSOR REMARK 3 S11: -0.0388 S12: -0.0185 S13: 0.1077 REMARK 3 S21: 0.0959 S22: -0.0083 S23: -0.0157 REMARK 3 S31: -0.0630 S32: 0.0533 S33: 0.0512 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 228 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3598 -4.9974 -11.0783 REMARK 3 T TENSOR REMARK 3 T11: 0.1575 T22: 0.1208 REMARK 3 T33: 0.1031 T12: 0.0035 REMARK 3 T13: 0.0013 T23: 0.0288 REMARK 3 L TENSOR REMARK 3 L11: 2.7751 L22: 1.6926 REMARK 3 L33: 2.2385 L12: 0.5490 REMARK 3 L13: 0.1780 L23: 0.3848 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: 0.0560 S13: -0.1189 REMARK 3 S21: 0.0359 S22: 0.0024 S23: -0.0451 REMARK 3 S31: 0.1730 S32: 0.0723 S33: 0.0013 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 302 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0298 -0.0095 -11.6168 REMARK 3 T TENSOR REMARK 3 T11: 0.1920 T22: 0.2286 REMARK 3 T33: 0.3394 T12: 0.0380 REMARK 3 T13: -0.0007 T23: 0.0404 REMARK 3 L TENSOR REMARK 3 L11: 0.0560 L22: 3.1663 REMARK 3 L33: 1.5798 L12: 0.4161 REMARK 3 L13: -0.1786 L23: -1.0871 REMARK 3 S TENSOR REMARK 3 S11: -0.0228 S12: -0.0177 S13: 0.3529 REMARK 3 S21: 0.2341 S22: 0.0919 S23: 0.6219 REMARK 3 S31: -0.3026 S32: -0.4086 S33: -0.1554 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 330 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.5842 1.3786 -24.4438 REMARK 3 T TENSOR REMARK 3 T11: 0.2069 T22: 0.2440 REMARK 3 T33: 0.1433 T12: -0.0380 REMARK 3 T13: -0.0615 T23: 0.0652 REMARK 3 L TENSOR REMARK 3 L11: 2.4737 L22: 2.9613 REMARK 3 L33: 3.1974 L12: -1.4008 REMARK 3 L13: -0.2796 L23: -0.7210 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: 0.4822 S13: 0.2549 REMARK 3 S21: -0.4161 S22: 0.0869 S23: 0.1336 REMARK 3 S31: -0.2111 S32: 0.0481 S33: 0.0517 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VCV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227242. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRROES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22471 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 19.560 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 27.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.14 REMARK 200 R MERGE FOR SHELL (I) : 0.29600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.110 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3P1A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6.9 MG/ML MYT1, 25 MM HEPES, 100 MM REMARK 280 SODIUM CHLORIDE, 0.5 MM DTT, 0.1 M CALCIUM CHLORIDE, 0.05 M TRIS REMARK 280 PH 8.5, 10 % PEG 4000, 1 MM DASATINIB, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.06500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.72000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.31500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 37.72000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.06500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.31500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 52 REMARK 465 HIS A 53 REMARK 465 HIS A 54 REMARK 465 HIS A 55 REMARK 465 HIS A 56 REMARK 465 HIS A 57 REMARK 465 HIS A 58 REMARK 465 SER A 59 REMARK 465 SER A 60 REMARK 465 GLY A 61 REMARK 465 VAL A 62 REMARK 465 ASP A 63 REMARK 465 LEU A 64 REMARK 465 GLY A 65 REMARK 465 THR A 66 REMARK 465 GLU A 67 REMARK 465 ASN A 68 REMARK 465 LEU A 69 REMARK 465 TYR A 70 REMARK 465 PHE A 71 REMARK 465 GLN A 72 REMARK 465 SER A 73 REMARK 465 PRO A 362 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ3 LYS A 163 OE1 GLU A 257 1.59 REMARK 500 OD2 ASP A 251 O HOH A 501 1.96 REMARK 500 O HOH A 504 O HOH A 561 2.02 REMARK 500 O1P TPO A 260 O HOH A 502 2.06 REMARK 500 O HOH A 501 O HOH A 558 2.18 REMARK 500 O HOH A 501 O HOH A 553 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 145 132.76 -34.52 REMARK 500 LEU A 232 -0.34 68.10 REMARK 500 ASP A 233 48.36 -141.33 REMARK 500 ASP A 251 76.36 53.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1N1 A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VCW RELATED DB: PDB REMARK 900 RELATED ID: 5VCX RELATED DB: PDB REMARK 900 RELATED ID: 5VCY RELATED DB: PDB REMARK 900 RELATED ID: 5VCZ RELATED DB: PDB REMARK 900 RELATED ID: 5VD0 RELATED DB: PDB REMARK 900 RELATED ID: 5VD1 RELATED DB: PDB REMARK 900 RELATED ID: 5VD3 RELATED DB: PDB DBREF 5VCV A 75 362 UNP Q99640 PMYT1_HUMAN 75 362 SEQADV 5VCV MET A 52 UNP Q99640 INITIATING METHIONINE SEQADV 5VCV HIS A 53 UNP Q99640 EXPRESSION TAG SEQADV 5VCV HIS A 54 UNP Q99640 EXPRESSION TAG SEQADV 5VCV HIS A 55 UNP Q99640 EXPRESSION TAG SEQADV 5VCV HIS A 56 UNP Q99640 EXPRESSION TAG SEQADV 5VCV HIS A 57 UNP Q99640 EXPRESSION TAG SEQADV 5VCV HIS A 58 UNP Q99640 EXPRESSION TAG SEQADV 5VCV SER A 59 UNP Q99640 EXPRESSION TAG SEQADV 5VCV SER A 60 UNP Q99640 EXPRESSION TAG SEQADV 5VCV GLY A 61 UNP Q99640 EXPRESSION TAG SEQADV 5VCV VAL A 62 UNP Q99640 EXPRESSION TAG SEQADV 5VCV ASP A 63 UNP Q99640 EXPRESSION TAG SEQADV 5VCV LEU A 64 UNP Q99640 EXPRESSION TAG SEQADV 5VCV GLY A 65 UNP Q99640 EXPRESSION TAG SEQADV 5VCV THR A 66 UNP Q99640 EXPRESSION TAG SEQADV 5VCV GLU A 67 UNP Q99640 EXPRESSION TAG SEQADV 5VCV ASN A 68 UNP Q99640 EXPRESSION TAG SEQADV 5VCV LEU A 69 UNP Q99640 EXPRESSION TAG SEQADV 5VCV TYR A 70 UNP Q99640 EXPRESSION TAG SEQADV 5VCV PHE A 71 UNP Q99640 EXPRESSION TAG SEQADV 5VCV GLN A 72 UNP Q99640 EXPRESSION TAG SEQADV 5VCV SER A 73 UNP Q99640 EXPRESSION TAG SEQADV 5VCV MET A 74 UNP Q99640 EXPRESSION TAG SEQRES 1 A 311 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 311 GLY THR GLU ASN LEU TYR PHE GLN SER MET HIS GLN LEU SEQRES 3 A 311 GLN PRO ARG ARG VAL SER PHE ARG GLY GLU ALA SER GLU SEQRES 4 A 311 THR LEU GLN SER PRO GLY TYR ASP PRO SER ARG PRO GLU SEQRES 5 A 311 SER PHE PHE GLN GLN SER PHE GLN ARG LEU SER ARG LEU SEQRES 6 A 311 GLY HIS GLY SER TYR GLY GLU VAL PHE LYS VAL ARG SER SEQRES 7 A 311 LYS GLU ASP GLY ARG LEU TYR ALA VAL LYS ARG SER MET SEQRES 8 A 311 SER PRO PHE ARG GLY PRO LYS ASP ARG ALA ARG LYS LEU SEQRES 9 A 311 ALA GLU VAL GLY SER HIS GLU LYS VAL GLY GLN HIS PRO SEQRES 10 A 311 CYS CYS VAL ARG LEU GLU GLN ALA TRP GLU GLU GLY GLY SEQRES 11 A 311 ILE LEU TYR LEU GLN THR GLU LEU CYS GLY PRO SER LEU SEQRES 12 A 311 GLN GLN HIS CYS GLU ALA TRP GLY ALA SER LEU PRO GLU SEQRES 13 A 311 ALA GLN VAL TRP GLY TYR LEU ARG ASP THR LEU LEU ALA SEQRES 14 A 311 LEU ALA HIS LEU HIS SER GLN GLY LEU VAL HIS LEU ASP SEQRES 15 A 311 VAL LYS PRO ALA ASN ILE PHE LEU GLY PRO ARG GLY ARG SEQRES 16 A 311 CYS LYS LEU GLY ASP PHE GLY LEU LEU VAL GLU LEU GLY SEQRES 17 A 311 TPO ALA GLY ALA GLY GLU VAL GLN GLU GLY ASP PRO ARG SEQRES 18 A 311 TYR MET ALA PRO GLU LEU LEU GLN GLY SER TYR GLY THR SEQRES 19 A 311 ALA ALA ASP VAL PHE SER LEU GLY LEU THR ILE LEU GLU SEQRES 20 A 311 VAL ALA CYS ASN MET GLU LEU PRO HIS GLY GLY GLU GLY SEQRES 21 A 311 TRP GLN GLN LEU ARG GLN GLY TYR LEU PRO PRO GLU PHE SEQRES 22 A 311 THR ALA GLY LEU SER SER GLU LEU ARG SER VAL LEU VAL SEQRES 23 A 311 MET MET LEU GLU PRO ASP PRO LYS LEU ARG ALA THR ALA SEQRES 24 A 311 GLU ALA LEU LEU ALA LEU PRO VAL LEU ARG GLN PRO MODRES 5VCV TPO A 260 THR MODIFIED RESIDUE HET TPO A 260 16 HET CL A 401 1 HET CL A 402 1 HET EDO A 403 10 HET 1N1 A 404 59 HETNAM TPO PHOSPHOTHREONINE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM 1N1 N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL) HETNAM 2 1N1 PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3- HETNAM 3 1N1 THIAZOLE-5-CARBOXAMIDE HETSYN TPO PHOSPHONOTHREONINE HETSYN EDO ETHYLENE GLYCOL HETSYN 1N1 DASATINIB FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 CL 2(CL 1-) FORMUL 4 EDO C2 H6 O2 FORMUL 5 1N1 C22 H26 CL N7 O2 S FORMUL 6 HOH *178(H2 O) HELIX 1 AA1 SER A 104 SER A 109 1 6 HELIX 2 AA2 GLY A 147 GLY A 165 1 19 HELIX 3 AA3 SER A 193 GLY A 202 1 10 HELIX 4 AA4 PRO A 206 SER A 226 1 21 HELIX 5 AA5 LYS A 235 ALA A 237 5 3 HELIX 6 AA6 PRO A 243 GLY A 245 5 3 HELIX 7 AA7 GLY A 262 VAL A 266 5 5 HELIX 8 AA8 ASP A 270 MET A 274 5 5 HELIX 9 AA9 ALA A 275 GLY A 281 5 7 HELIX 10 AB1 THR A 285 ASN A 302 1 18 HELIX 11 AB2 GLY A 308 ARG A 316 1 9 HELIX 12 AB3 PRO A 321 ALA A 326 1 6 HELIX 13 AB4 SER A 329 LEU A 340 1 12 HELIX 14 AB5 THR A 349 ALA A 355 1 7 HELIX 15 AB6 LEU A 356 ARG A 360 5 5 SHEET 1 AA1 6 ARG A 80 ARG A 81 0 SHEET 2 AA1 6 LEU A 173 GLU A 179 -1 O GLU A 178 N ARG A 80 SHEET 3 AA1 6 ILE A 182 GLU A 188 -1 O TYR A 184 N TRP A 177 SHEET 4 AA1 6 LEU A 135 SER A 141 -1 N ALA A 137 O THR A 187 SHEET 5 AA1 6 GLY A 122 SER A 129 -1 N GLU A 123 O ARG A 140 SHEET 6 AA1 6 PHE A 110 GLY A 119 -1 N LEU A 116 O VAL A 124 SHEET 1 AA2 2 LEU A 229 VAL A 230 0 SHEET 2 AA2 2 VAL A 256 GLU A 257 -1 O VAL A 256 N VAL A 230 SHEET 1 AA3 2 ILE A 239 LEU A 241 0 SHEET 2 AA3 2 CYS A 247 LEU A 249 -1 O LYS A 248 N PHE A 240 LINK C GLY A 259 N TPO A 260 1555 1555 1.33 LINK C TPO A 260 N ALA A 261 1555 1555 1.33 SITE 1 AC1 6 GLY A 147 PRO A 148 LYS A 149 ASP A 150 SITE 2 AC1 6 GLY A 309 GLN A 313 SITE 1 AC2 4 SER A 104 PHE A 106 ARG A 140 TYR A 184 SITE 1 AC3 5 LEU A 77 GLN A 78 GLU A 179 GLY A 180 SITE 2 AC3 5 GLY A 181 SITE 1 AC4 14 LEU A 116 ALA A 137 LYS A 139 GLU A 157 SITE 2 AC4 14 LEU A 185 THR A 187 GLU A 188 CYS A 190 SITE 3 AC4 14 GLY A 191 PRO A 192 GLN A 196 PHE A 240 SITE 4 AC4 14 ASP A 251 HOH A 516 CRYST1 56.130 68.630 75.440 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017816 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013256 0.00000