HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-APR-17 5VD5 TITLE CRYSTAL STRUCTURE OF HUMAN WEE1 KINASE DOMAIN IN COMPLEX WITH RAC-IV- TITLE 2 050, A MK1775 ANALOUGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WEE1-LIKE PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 291-575; COMPND 5 SYNONYM: WEE1HU,WEE1A KINASE; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WEE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS KINASE DOMAIN, CELL CYCLE, WEE1, TRANSFERASE, INHIBITOR, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.-Y.ZHU,E.SCHONBRUNN REVDAT 3 04-OCT-23 5VD5 1 COMPND HETNAM REVDAT 2 11-DEC-19 5VD5 1 REMARK REVDAT 1 04-APR-18 5VD5 0 JRNL AUTH J.-Y.ZHU,E.SCHONBRUNN JRNL TITL STRUCTURAL BASIS OF WEE FAMILY KINASE INHIBITION BY SMALL JRNL TITL 2 MOLECULES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.43 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 17720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 886 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4341 - 3.7239 0.99 2865 150 0.1701 0.2149 REMARK 3 2 3.7239 - 2.9562 0.99 2811 148 0.1954 0.2393 REMARK 3 3 2.9562 - 2.5826 0.99 2789 147 0.2102 0.2562 REMARK 3 4 2.5826 - 2.3465 1.00 2790 147 0.2137 0.2473 REMARK 3 5 2.3465 - 2.1784 1.00 2792 147 0.2120 0.2345 REMARK 3 6 2.1784 - 2.0500 0.99 2787 147 0.2304 0.3156 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.36 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2154 REMARK 3 ANGLE : 0.923 2910 REMARK 3 CHIRALITY : 0.034 312 REMARK 3 PLANARITY : 0.004 372 REMARK 3 DIHEDRAL : 14.802 806 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5393 -2.2101 7.6051 REMARK 3 T TENSOR REMARK 3 T11: 0.2376 T22: 0.2241 REMARK 3 T33: 0.3318 T12: -0.0181 REMARK 3 T13: -0.0321 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 2.6700 L22: 6.9666 REMARK 3 L33: 5.9361 L12: 1.7795 REMARK 3 L13: -2.0307 L23: -1.9252 REMARK 3 S TENSOR REMARK 3 S11: -0.3258 S12: 0.4179 S13: -0.6690 REMARK 3 S21: -0.5893 S22: 0.1220 S23: -0.1531 REMARK 3 S31: 0.2795 S32: -0.3616 S33: 0.2321 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.1839 -6.4486 9.3777 REMARK 3 T TENSOR REMARK 3 T11: 0.3050 T22: 0.2026 REMARK 3 T33: 0.2439 T12: -0.0461 REMARK 3 T13: -0.0207 T23: 0.0454 REMARK 3 L TENSOR REMARK 3 L11: 4.0634 L22: 3.8691 REMARK 3 L33: 3.3089 L12: -3.0213 REMARK 3 L13: -0.6466 L23: 1.6664 REMARK 3 S TENSOR REMARK 3 S11: -0.1234 S12: -0.2011 S13: -0.2860 REMARK 3 S21: -0.3730 S22: 0.2222 S23: 0.4089 REMARK 3 S31: 0.1597 S32: 0.2822 S33: -0.0469 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8895 -9.2775 13.6143 REMARK 3 T TENSOR REMARK 3 T11: 0.6173 T22: 0.3094 REMARK 3 T33: 0.5941 T12: 0.0118 REMARK 3 T13: -0.1243 T23: -0.1102 REMARK 3 L TENSOR REMARK 3 L11: 3.3871 L22: 2.4177 REMARK 3 L33: 4.7616 L12: -0.8230 REMARK 3 L13: 1.4658 L23: -0.5776 REMARK 3 S TENSOR REMARK 3 S11: 0.4174 S12: 0.3781 S13: -1.3949 REMARK 3 S21: -0.2473 S22: 0.0690 S23: 0.3033 REMARK 3 S31: 0.0861 S32: -0.6787 S33: 0.9932 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 354 THROUGH 368 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.8539 -4.7802 19.5470 REMARK 3 T TENSOR REMARK 3 T11: 0.3464 T22: 0.2600 REMARK 3 T33: 0.2668 T12: 0.0556 REMARK 3 T13: -0.0236 T23: 0.1202 REMARK 3 L TENSOR REMARK 3 L11: 3.8313 L22: 2.1215 REMARK 3 L33: 0.5165 L12: 2.0942 REMARK 3 L13: 0.9323 L23: -0.0228 REMARK 3 S TENSOR REMARK 3 S11: 0.4917 S12: -0.6916 S13: -0.7069 REMARK 3 S21: 0.2895 S22: -0.1707 S23: -0.4641 REMARK 3 S31: 0.3936 S32: -0.3207 S33: 0.0815 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 369 THROUGH 383 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.2764 -2.1236 11.4096 REMARK 3 T TENSOR REMARK 3 T11: 0.2914 T22: 0.2096 REMARK 3 T33: 0.1986 T12: 0.0373 REMARK 3 T13: 0.0027 T23: 0.0960 REMARK 3 L TENSOR REMARK 3 L11: 4.9591 L22: 6.1467 REMARK 3 L33: 3.3189 L12: 1.1882 REMARK 3 L13: 1.2655 L23: 1.2893 REMARK 3 S TENSOR REMARK 3 S11: -0.1583 S12: 0.0300 S13: -0.0531 REMARK 3 S21: -0.5946 S22: 0.2411 S23: 0.2802 REMARK 3 S31: 0.3042 S32: 0.1594 S33: -0.1391 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 384 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6989 22.0103 12.7612 REMARK 3 T TENSOR REMARK 3 T11: 0.6840 T22: 0.2600 REMARK 3 T33: 0.4761 T12: 0.0728 REMARK 3 T13: -0.1342 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 3.3945 L22: 0.5243 REMARK 3 L33: 0.6434 L12: 0.1877 REMARK 3 L13: -1.1619 L23: 0.2924 REMARK 3 S TENSOR REMARK 3 S11: -0.2177 S12: 0.2135 S13: 1.0493 REMARK 3 S21: 0.3677 S22: -0.0194 S23: -0.1599 REMARK 3 S31: -1.6037 S32: -0.4472 S33: -0.2833 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 461 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8397 7.9666 22.5380 REMARK 3 T TENSOR REMARK 3 T11: 0.2967 T22: 0.2451 REMARK 3 T33: 0.1698 T12: 0.0379 REMARK 3 T13: -0.0527 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 2.3593 L22: 2.5985 REMARK 3 L33: 2.0081 L12: 0.1254 REMARK 3 L13: 0.4857 L23: -0.1799 REMARK 3 S TENSOR REMARK 3 S11: -0.2249 S12: -0.4242 S13: 0.1895 REMARK 3 S21: 0.4877 S22: -0.0762 S23: -0.2035 REMARK 3 S31: -0.3570 S32: -0.0647 S33: -0.0264 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 462 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.8105 -0.7887 13.5692 REMARK 3 T TENSOR REMARK 3 T11: 0.3713 T22: 0.3771 REMARK 3 T33: 0.3825 T12: 0.0579 REMARK 3 T13: 0.0085 T23: 0.0610 REMARK 3 L TENSOR REMARK 3 L11: 5.4943 L22: 4.3774 REMARK 3 L33: 4.9344 L12: 1.0472 REMARK 3 L13: -0.6567 L23: -1.9512 REMARK 3 S TENSOR REMARK 3 S11: 0.0327 S12: 0.6590 S13: -0.5086 REMARK 3 S21: -0.7797 S22: -0.2491 S23: -0.4273 REMARK 3 S31: 0.6965 S32: 0.3164 S33: 0.0460 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 485 THROUGH 571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9624 13.7997 18.8200 REMARK 3 T TENSOR REMARK 3 T11: 0.3905 T22: 0.3484 REMARK 3 T33: 0.5752 T12: -0.0559 REMARK 3 T13: -0.1546 T23: 0.0709 REMARK 3 L TENSOR REMARK 3 L11: 4.1897 L22: 3.3137 REMARK 3 L33: 1.7468 L12: -0.7501 REMARK 3 L13: 0.1132 L23: -0.4233 REMARK 3 S TENSOR REMARK 3 S11: -0.1555 S12: -0.1064 S13: 0.9383 REMARK 3 S21: 0.2873 S22: -0.2347 S23: -0.9632 REMARK 3 S31: -0.3665 S32: 0.4780 S33: -0.5074 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VD5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227252. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17725 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 36.428 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.672 REMARK 200 R MERGE (I) : 0.04200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.55 REMARK 200 R MERGE FOR SHELL (I) : 0.32200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.470 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5V5Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.0 MG/ML WEE1, 25 MM NA/K PHOSPHATE, REMARK 280 1 MM DTT, 0.05 M AMMONIUM SULFATE, 0.05 M BIS-TRIS (PH 5.5), 7.5 REMARK 280 % PEG 3350, 1 MM RAC-IV-050, PH 6.9, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.29000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 287 REMARK 465 ALA A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 MET A 291 REMARK 465 LYS A 292 REMARK 465 THR A 437 REMARK 465 SER A 438 REMARK 465 ILE A 439 REMARK 465 PRO A 440 REMARK 465 ASN A 441 REMARK 465 ALA A 442 REMARK 465 ALA A 443 REMARK 465 SER A 444 REMARK 465 GLU A 445 REMARK 465 GLU A 446 REMARK 465 GLY A 447 REMARK 465 ASP A 448 REMARK 465 GLU A 449 REMARK 465 ASP A 450 REMARK 465 ASP A 451 REMARK 465 TRP A 452 REMARK 465 ALA A 453 REMARK 465 SER A 454 REMARK 465 ASN A 455 REMARK 465 ALA A 572 REMARK 465 SER A 573 REMARK 465 ARG A 574 REMARK 465 LYS A 575 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 342 HH21 ARG A 345 1.41 REMARK 500 H ILE A 534 O HOH A 702 1.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HH12 ARG A 319 OE2 GLU A 490 1455 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 396 -167.99 -112.85 REMARK 500 ASP A 426 44.86 -151.56 REMARK 500 ASP A 463 76.73 54.99 REMARK 500 SER A 472 68.28 -114.32 REMARK 500 HIS A 494 48.36 -142.68 REMARK 500 ASN A 519 -173.20 -179.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 99M A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VC3 RELATED DB: PDB REMARK 900 RELATED ID: 5VC4 RELATED DB: PDB REMARK 900 RELATED ID: 5VC5 RELATED DB: PDB REMARK 900 RELATED ID: 5VD2 RELATED DB: PDB REMARK 900 RELATED ID: 5VC6 RELATED DB: PDB REMARK 900 RELATED ID: 5VD9 RELATED DB: PDB REMARK 900 RELATED ID: 5VD8 RELATED DB: PDB REMARK 900 RELATED ID: 5VD7 RELATED DB: PDB REMARK 900 RELATED ID: 5VD4 RELATED DB: PDB REMARK 900 RELATED ID: 5VDA RELATED DB: PDB DBREF 5VD5 A 291 575 UNP P30291 WEE1_HUMAN 291 575 SEQADV 5VD5 GLY A 287 UNP P30291 EXPRESSION TAG SEQADV 5VD5 ALA A 288 UNP P30291 EXPRESSION TAG SEQADV 5VD5 GLY A 289 UNP P30291 EXPRESSION TAG SEQADV 5VD5 SER A 290 UNP P30291 EXPRESSION TAG SEQRES 1 A 289 GLY ALA GLY SER MET LYS SER ARG TYR THR THR GLU PHE SEQRES 2 A 289 HIS GLU LEU GLU LYS ILE GLY SER GLY GLU PHE GLY SER SEQRES 3 A 289 VAL PHE LYS CYS VAL LYS ARG LEU ASP GLY CYS ILE TYR SEQRES 4 A 289 ALA ILE LYS ARG SER LYS LYS PRO LEU ALA GLY SER VAL SEQRES 5 A 289 ASP GLU GLN ASN ALA LEU ARG GLU VAL TYR ALA HIS ALA SEQRES 6 A 289 VAL LEU GLY GLN HIS SER HIS VAL VAL ARG TYR PHE SER SEQRES 7 A 289 ALA TRP ALA GLU ASP ASP HIS MET LEU ILE GLN ASN GLU SEQRES 8 A 289 TYR CYS ASN GLY GLY SER LEU ALA ASP ALA ILE SER GLU SEQRES 9 A 289 ASN TYR ARG ILE MET SER TYR PHE LYS GLU ALA GLU LEU SEQRES 10 A 289 LYS ASP LEU LEU LEU GLN VAL GLY ARG GLY LEU ARG TYR SEQRES 11 A 289 ILE HIS SER MET SER LEU VAL HIS MET ASP ILE LYS PRO SEQRES 12 A 289 SER ASN ILE PHE ILE SER ARG THR SER ILE PRO ASN ALA SEQRES 13 A 289 ALA SER GLU GLU GLY ASP GLU ASP ASP TRP ALA SER ASN SEQRES 14 A 289 LYS VAL MET PHE LYS ILE GLY ASP LEU GLY HIS VAL THR SEQRES 15 A 289 ARG ILE SER SER PRO GLN VAL GLU GLU GLY ASP SER ARG SEQRES 16 A 289 PHE LEU ALA ASN GLU VAL LEU GLN GLU ASN TYR THR HIS SEQRES 17 A 289 LEU PRO LYS ALA ASP ILE PHE ALA LEU ALA LEU THR VAL SEQRES 18 A 289 VAL CYS ALA ALA GLY ALA GLU PRO LEU PRO ARG ASN GLY SEQRES 19 A 289 ASP GLN TRP HIS GLU ILE ARG GLN GLY ARG LEU PRO ARG SEQRES 20 A 289 ILE PRO GLN VAL LEU SER GLN GLU PHE THR GLU LEU LEU SEQRES 21 A 289 LYS VAL MET ILE HIS PRO ASP PRO GLU ARG ARG PRO SER SEQRES 22 A 289 ALA MET ALA LEU VAL LYS HIS SER VAL LEU LEU SER ALA SEQRES 23 A 289 SER ARG LYS HET 99M A 601 65 HET CL A 602 1 HETNAM 99M 1-[6-(2-HYDROXYPROPAN-2-YL)PYRIDIN-2-YL]-6-{[4- HETNAM 2 99M (MORPHOLIN-4-YL)PHENYL]AMINO}-2-(PROP-2-EN-1-YL)-1,2- HETNAM 3 99M DIHYDRO-3H-PYRAZOLO [3,4-D]PYRIMIDIN-3-ONE HETNAM CL CHLORIDE ION HETSYN 99M RAC-IV-050 FORMUL 2 99M C26 H29 N7 O3 FORMUL 3 CL CL 1- FORMUL 4 HOH *61(H2 O) HELIX 1 AA1 SER A 293 GLU A 298 1 6 HELIX 2 AA2 SER A 337 GLY A 354 1 18 HELIX 3 AA3 SER A 383 ILE A 394 1 12 HELIX 4 AA4 LYS A 399 MET A 420 1 22 HELIX 5 AA5 LYS A 428 SER A 430 5 3 HELIX 6 AA6 ASP A 463 VAL A 467 5 5 HELIX 7 AA7 ASP A 479 LEU A 483 5 5 HELIX 8 AA8 ALA A 484 GLN A 489 1 6 HELIX 9 AA9 HIS A 494 ALA A 511 1 18 HELIX 10 AB1 GLY A 520 GLN A 528 1 9 HELIX 11 AB2 SER A 539 ILE A 550 1 12 HELIX 12 AB3 SER A 559 LYS A 565 1 7 SHEET 1 AA1 5 PHE A 299 GLY A 308 0 SHEET 2 AA1 5 GLY A 311 LYS A 318 -1 O LYS A 315 N GLU A 303 SHEET 3 AA1 5 ILE A 324 LYS A 331 -1 O ARG A 329 N SER A 312 SHEET 4 AA1 5 HIS A 371 GLU A 377 -1 O ASN A 376 N ALA A 326 SHEET 5 AA1 5 TYR A 362 GLU A 368 -1 N TRP A 366 O LEU A 373 SHEET 1 AA2 2 LEU A 422 VAL A 423 0 SHEET 2 AA2 2 THR A 468 ARG A 469 -1 O THR A 468 N VAL A 423 SHEET 1 AA3 2 ILE A 432 SER A 435 0 SHEET 2 AA3 2 MET A 458 ILE A 461 -1 O LYS A 460 N PHE A 433 CISPEP 1 LEU A 570 SER A 571 0 -5.33 SITE 1 AC1 12 ILE A 305 PHE A 310 ALA A 326 VAL A 360 SITE 2 AC1 12 ASN A 376 GLU A 377 TYR A 378 CYS A 379 SITE 3 AC1 12 GLY A 382 PHE A 433 ASP A 463 HOH A 739 CRYST1 50.240 44.580 64.650 90.00 102.17 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019904 0.000000 0.004293 0.00000 SCALE2 0.000000 0.022432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015824 0.00000