HEADER TRANSFERASE/TRANSFERASE INHIBITOR 01-APR-17 5VDA TITLE CRYSTAL STRUCTURE OF HUMAN WEE1 KINASE DOMAIN IN COMPLEX WITH RAC-IV- TITLE 2 101, A MK1775 ANALOGUE COMPND MOL_ID: 1; COMPND 2 MOLECULE: WEE1-LIKE PROTEIN KINASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 291-575; COMPND 5 SYNONYM: WEE1HU,WEE1A KINASE; COMPND 6 EC: 2.7.10.2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: WEE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-RIPL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS KINASE DOMAIN, CELL CYCLE, WEE1, TRANSFERASE, INHIBITOR, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.-Y.ZHU,E.SCHONBRUNN REVDAT 4 06-MAR-24 5VDA 1 REMARK REVDAT 3 15-JAN-20 5VDA 1 REMARK REVDAT 2 11-DEC-19 5VDA 1 REMARK REVDAT 1 04-APR-18 5VDA 0 JRNL AUTH J.-Y.ZHU,E.SCHONBRUNN JRNL TITL STRUCTURAL BASIS OF WEE FAMILY KINASE INHIBITION BY SMALL JRNL TITL 2 MOLECULES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 16520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 827 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.1930 - 3.8157 0.98 2666 141 0.1663 0.2343 REMARK 3 2 3.8157 - 3.0286 0.99 2624 138 0.1776 0.2447 REMARK 3 3 3.0286 - 2.6458 1.00 2610 137 0.2149 0.2689 REMARK 3 4 2.6458 - 2.4039 1.00 2608 138 0.2198 0.3172 REMARK 3 5 2.4039 - 2.2316 1.00 2591 136 0.2169 0.2853 REMARK 3 6 2.2316 - 2.1000 1.00 2594 137 0.2238 0.2870 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 2148 REMARK 3 ANGLE : 1.598 2900 REMARK 3 CHIRALITY : 0.058 312 REMARK 3 PLANARITY : 0.008 371 REMARK 3 DIHEDRAL : 15.082 806 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 293 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6392 -2.2204 7.6594 REMARK 3 T TENSOR REMARK 3 T11: 0.2961 T22: 0.2241 REMARK 3 T33: 0.2801 T12: 0.0142 REMARK 3 T13: -0.0389 T23: 0.0959 REMARK 3 L TENSOR REMARK 3 L11: 5.5732 L22: 3.4579 REMARK 3 L33: 3.6944 L12: -2.1982 REMARK 3 L13: -1.2281 L23: 1.2292 REMARK 3 S TENSOR REMARK 3 S11: 0.0572 S12: 0.1695 S13: -0.3759 REMARK 3 S21: -0.3261 S22: -0.0664 S23: 0.2097 REMARK 3 S31: 0.1832 S32: -0.2353 S33: -0.0474 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2680 -6.6215 9.3866 REMARK 3 T TENSOR REMARK 3 T11: 0.3651 T22: 0.2752 REMARK 3 T33: 0.3800 T12: -0.0150 REMARK 3 T13: -0.0306 T23: 0.1369 REMARK 3 L TENSOR REMARK 3 L11: 1.9731 L22: 2.6565 REMARK 3 L33: 1.8253 L12: -1.0902 REMARK 3 L13: 0.0280 L23: 1.3256 REMARK 3 S TENSOR REMARK 3 S11: 0.0657 S12: -0.4022 S13: -0.4919 REMARK 3 S21: -0.3151 S22: 0.2072 S23: 0.1439 REMARK 3 S31: 0.1782 S32: 0.2119 S33: 0.3369 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 338 THROUGH 353 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.0841 -9.2289 13.3017 REMARK 3 T TENSOR REMARK 3 T11: 0.5777 T22: 0.1999 REMARK 3 T33: 0.7117 T12: -0.0031 REMARK 3 T13: -0.1183 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 4.1060 L22: 3.5216 REMARK 3 L33: 0.8929 L12: -0.2365 REMARK 3 L13: 0.8650 L23: 0.8439 REMARK 3 S TENSOR REMARK 3 S11: 0.4195 S12: 0.5202 S13: -1.0112 REMARK 3 S21: -0.8187 S22: 0.4114 S23: 0.7695 REMARK 3 S31: -0.0445 S32: -0.5862 S33: 1.0484 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 354 THROUGH 420 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3069 6.6723 18.1530 REMARK 3 T TENSOR REMARK 3 T11: 0.3082 T22: 0.1910 REMARK 3 T33: 0.1259 T12: 0.0586 REMARK 3 T13: 0.0206 T23: 0.0077 REMARK 3 L TENSOR REMARK 3 L11: 3.8728 L22: 2.5059 REMARK 3 L33: 2.6103 L12: -0.3674 REMARK 3 L13: 1.0155 L23: -1.3230 REMARK 3 S TENSOR REMARK 3 S11: -0.2503 S12: -0.3876 S13: 0.2306 REMARK 3 S21: 0.2308 S22: 0.1503 S23: 0.0844 REMARK 3 S31: -0.4366 S32: -0.1689 S33: -0.1265 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 421 THROUGH 484 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5987 2.7025 15.8614 REMARK 3 T TENSOR REMARK 3 T11: 0.2413 T22: 0.1783 REMARK 3 T33: 0.2307 T12: 0.0049 REMARK 3 T13: 0.0128 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 4.0260 L22: 3.6853 REMARK 3 L33: 4.7400 L12: 0.1087 REMARK 3 L13: 1.5189 L23: -1.3326 REMARK 3 S TENSOR REMARK 3 S11: 0.1295 S12: 0.2753 S13: -0.4301 REMARK 3 S21: -0.1180 S22: -0.1135 S23: -0.3316 REMARK 3 S31: 0.1849 S32: 0.2870 S33: -0.0277 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 485 THROUGH 571 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9454 13.7237 18.7696 REMARK 3 T TENSOR REMARK 3 T11: 0.3647 T22: 0.2843 REMARK 3 T33: 0.5722 T12: -0.0518 REMARK 3 T13: -0.1424 T23: 0.0726 REMARK 3 L TENSOR REMARK 3 L11: 5.1904 L22: 3.5933 REMARK 3 L33: 1.9103 L12: -1.4758 REMARK 3 L13: 0.8371 L23: -0.3549 REMARK 3 S TENSOR REMARK 3 S11: -0.3235 S12: -0.1126 S13: 1.0726 REMARK 3 S21: 0.3462 S22: -0.1034 S23: -1.0261 REMARK 3 S31: -0.3491 S32: 0.3583 S33: -0.2503 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VDA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227256. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 6.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : MIRRORS REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN 944+ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16522 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 63.164 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.647 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.6600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.26400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 5.0 MG/ML WEE1, 25 MM NA/K PHOSPHATE, REMARK 280 1 MM DTT, 0.05 M AMMONIUM SULFATE, 0.05 M BIS-TRIS (PH 5.5), 7.5 REMARK 280 % PEG 3350, 1 MM RAC-IV-101, PH 6.9, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.32000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 287 REMARK 465 ALA A 288 REMARK 465 GLY A 289 REMARK 465 SER A 290 REMARK 465 MET A 291 REMARK 465 LYS A 292 REMARK 465 THR A 437 REMARK 465 SER A 438 REMARK 465 ILE A 439 REMARK 465 PRO A 440 REMARK 465 ASN A 441 REMARK 465 ALA A 442 REMARK 465 ALA A 443 REMARK 465 SER A 444 REMARK 465 GLU A 445 REMARK 465 GLU A 446 REMARK 465 GLY A 447 REMARK 465 ASP A 448 REMARK 465 GLU A 449 REMARK 465 ASP A 450 REMARK 465 ASP A 451 REMARK 465 TRP A 452 REMARK 465 ALA A 453 REMARK 465 SER A 454 REMARK 465 ASN A 455 REMARK 465 LYS A 456 REMARK 465 ALA A 572 REMARK 465 SER A 573 REMARK 465 ARG A 574 REMARK 465 LYS A 575 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O THR A 296 HH12 ARG A 319 1.21 REMARK 500 HZ2 LYS A 318 O HOH A 706 1.55 REMARK 500 HG22 ILE A 534 O HOH A 712 1.59 REMARK 500 O THR A 296 NH1 ARG A 319 2.03 REMARK 500 O GLY A 354 O HOH A 701 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 394 N - CA - C ANGL. DEV. = 18.1 DEGREES REMARK 500 MET A 395 CG - SD - CE ANGL. DEV. = 11.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 303 135.14 -174.23 REMARK 500 SER A 396 -168.45 -122.19 REMARK 500 ASP A 426 45.11 -147.31 REMARK 500 ASP A 463 76.02 57.74 REMARK 500 ASN A 519 -172.73 -173.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 98D A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VC3 RELATED DB: PDB REMARK 900 RELATED ID: 5VC4 RELATED DB: PDB REMARK 900 RELATED ID: 5VC5 RELATED DB: PDB REMARK 900 RELATED ID: 5VD2 RELATED DB: PDB REMARK 900 RELATED ID: 5VC6 RELATED DB: PDB REMARK 900 RELATED ID: 5VD8 RELATED DB: PDB REMARK 900 RELATED ID: 5VD7 RELATED DB: PDB REMARK 900 RELATED ID: 5VD5 RELATED DB: PDB REMARK 900 RELATED ID: 5VD4 RELATED DB: PDB DBREF 5VDA A 291 575 UNP P30291 WEE1_HUMAN 291 575 SEQADV 5VDA GLY A 287 UNP P30291 EXPRESSION TAG SEQADV 5VDA ALA A 288 UNP P30291 EXPRESSION TAG SEQADV 5VDA GLY A 289 UNP P30291 EXPRESSION TAG SEQADV 5VDA SER A 290 UNP P30291 EXPRESSION TAG SEQRES 1 A 289 GLY ALA GLY SER MET LYS SER ARG TYR THR THR GLU PHE SEQRES 2 A 289 HIS GLU LEU GLU LYS ILE GLY SER GLY GLU PHE GLY SER SEQRES 3 A 289 VAL PHE LYS CYS VAL LYS ARG LEU ASP GLY CYS ILE TYR SEQRES 4 A 289 ALA ILE LYS ARG SER LYS LYS PRO LEU ALA GLY SER VAL SEQRES 5 A 289 ASP GLU GLN ASN ALA LEU ARG GLU VAL TYR ALA HIS ALA SEQRES 6 A 289 VAL LEU GLY GLN HIS SER HIS VAL VAL ARG TYR PHE SER SEQRES 7 A 289 ALA TRP ALA GLU ASP ASP HIS MET LEU ILE GLN ASN GLU SEQRES 8 A 289 TYR CYS ASN GLY GLY SER LEU ALA ASP ALA ILE SER GLU SEQRES 9 A 289 ASN TYR ARG ILE MET SER TYR PHE LYS GLU ALA GLU LEU SEQRES 10 A 289 LYS ASP LEU LEU LEU GLN VAL GLY ARG GLY LEU ARG TYR SEQRES 11 A 289 ILE HIS SER MET SER LEU VAL HIS MET ASP ILE LYS PRO SEQRES 12 A 289 SER ASN ILE PHE ILE SER ARG THR SER ILE PRO ASN ALA SEQRES 13 A 289 ALA SER GLU GLU GLY ASP GLU ASP ASP TRP ALA SER ASN SEQRES 14 A 289 LYS VAL MET PHE LYS ILE GLY ASP LEU GLY HIS VAL THR SEQRES 15 A 289 ARG ILE SER SER PRO GLN VAL GLU GLU GLY ASP SER ARG SEQRES 16 A 289 PHE LEU ALA ASN GLU VAL LEU GLN GLU ASN TYR THR HIS SEQRES 17 A 289 LEU PRO LYS ALA ASP ILE PHE ALA LEU ALA LEU THR VAL SEQRES 18 A 289 VAL CYS ALA ALA GLY ALA GLU PRO LEU PRO ARG ASN GLY SEQRES 19 A 289 ASP GLN TRP HIS GLU ILE ARG GLN GLY ARG LEU PRO ARG SEQRES 20 A 289 ILE PRO GLN VAL LEU SER GLN GLU PHE THR GLU LEU LEU SEQRES 21 A 289 LYS VAL MET ILE HIS PRO ASP PRO GLU ARG ARG PRO SER SEQRES 22 A 289 ALA MET ALA LEU VAL LYS HIS SER VAL LEU LEU SER ALA SEQRES 23 A 289 SER ARG LYS HET 98D A 601 66 HET CL A 602 1 HET EDO A 603 10 HETNAM 98D 1-{6-[(1S)-1-HYDROXYETHYL]PYRIDIN-2-YL}-6-{[4-(4- HETNAM 2 98D METHYLPIPERAZIN-1-YL)PHENYL]AMINO}-2-(PROP-2-EN-1-YL)- HETNAM 3 98D 1,2-DIHYDRO-3H-PYRAZOLO[3,4-D]PYRIMIDIN-3-ONE HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 98D C26 H30 N8 O2 FORMUL 3 CL CL 1- FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *83(H2 O) HELIX 1 AA1 SER A 293 GLU A 298 1 6 HELIX 2 AA2 SER A 337 GLY A 354 1 18 HELIX 3 AA3 SER A 383 MET A 395 1 13 HELIX 4 AA4 LYS A 399 MET A 420 1 22 HELIX 5 AA5 LYS A 428 SER A 430 5 3 HELIX 6 AA6 ALA A 484 GLN A 489 1 6 HELIX 7 AA7 HIS A 494 ALA A 511 1 18 HELIX 8 AA8 GLY A 520 GLN A 528 1 9 HELIX 9 AA9 SER A 539 ILE A 550 1 12 HELIX 10 AB1 SER A 559 LYS A 565 1 7 SHEET 1 AA1 5 PHE A 299 GLY A 308 0 SHEET 2 AA1 5 GLY A 311 LYS A 318 -1 O LYS A 315 N GLU A 303 SHEET 3 AA1 5 ILE A 324 LYS A 331 -1 O ARG A 329 N SER A 312 SHEET 4 AA1 5 HIS A 371 GLU A 377 -1 O MET A 372 N SER A 330 SHEET 5 AA1 5 TYR A 362 GLU A 368 -1 N PHE A 363 O GLN A 375 SHEET 1 AA2 2 LEU A 422 VAL A 423 0 SHEET 2 AA2 2 THR A 468 ARG A 469 -1 O THR A 468 N VAL A 423 SHEET 1 AA3 2 ILE A 432 SER A 435 0 SHEET 2 AA3 2 MET A 458 ILE A 461 -1 O MET A 458 N SER A 435 CISPEP 1 ILE A 394 MET A 395 0 -11.30 CISPEP 2 SER A 471 SER A 472 0 0.62 CISPEP 3 LEU A 570 SER A 571 0 7.40 SITE 1 AC1 12 ILE A 305 VAL A 313 VAL A 360 ASN A 376 SITE 2 AC1 12 GLU A 377 TYR A 378 CYS A 379 GLY A 382 SITE 3 AC1 12 PHE A 433 ASP A 463 HOH A 741 HOH A 746 SITE 1 AC2 2 GLU A 301 LEU A 302 CRYST1 50.360 44.640 64.620 90.00 102.18 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019857 0.000000 0.004287 0.00000 SCALE2 0.000000 0.022401 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015832 0.00000