HEADER UNKNOWN FUNCTION 07-APR-17 5VFK TITLE SOLUTION STRUCTURE OF AN ARCHAEAL DUF61 FAMILY PROTEIN SSO0941 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS (STRAIN ATCC 35092 / SOURCE 3 DSM 1617 / JCM 11322 / P2); SOURCE 4 ORGANISM_TAXID: 273057; SOURCE 5 STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; SOURCE 6 GENE: SSO0941; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET30A KEYWDS UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.ZHOU,J.WANG,Y.FENG REVDAT 4 15-MAY-24 5VFK 1 REMARK REVDAT 3 14-JUN-23 5VFK 1 REMARK REVDAT 2 04-JUL-18 5VFK 1 JRNL REVDAT 1 21-MAR-18 5VFK 0 JRNL AUTH T.ZHOU,X.YAO,J.WANG,Y.FENG JRNL TITL SOLUTION STRUCTURE OF AN ARCHAEAL DUF61 FAMILY PROTEIN JRNL TITL 2 SSO0941 ENCODED BY A GENE IN THE OPERON OF BOX C/D RNA JRNL TITL 3 PROTEIN COMPLEXES. JRNL REF J. STRUCT. BIOL. V. 203 179 2018 JRNL REFN ESSN 1095-8657 JRNL PMID 29526782 JRNL DOI 10.1016/J.JSB.2018.03.003 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, SANE REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (CNS), DUGGAN, LEGGE, DYSON & WRIGHT (SANE) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VFK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227351. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 310 REMARK 210 PH : 4.4 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-13C; U-15N] SSO0941, 50 REMARK 210 MM [U-2H] SODIUM ACETATE, 0.2 MG/ REMARK 210 ML SODIUM AZIDE, 0.1 MG/L DSS, REMARK 210 90% H2O/10% D2O; 1 MM [U-13C; U- REMARK 210 15N] SSO0941, 50 MM [U-2H] REMARK 210 SODIUM ACETATE, 0.2 MG/ML SODIUM REMARK 210 AZIDE, 0.1 MG/ML DSS, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCA; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D HN(CA)CO; 3D REMARK 210 HBHA(CO)NH; 3D HBHANH; 3D HCCH- REMARK 210 TOCSY; 3D HCCH-COSY; 3D CCH- REMARK 210 TOCSY; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, FELIX, NMRPIPE, REMARK 210 NMRVIEW, CYANA REMARK 210 METHOD USED : MOLECULAR DYNAMICS SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 5 91.44 76.45 REMARK 500 1 GLU A 7 143.65 78.13 REMARK 500 1 ASN A 101 -51.84 -148.89 REMARK 500 1 SER A 128 133.41 71.89 REMARK 500 2 ASP A 3 -154.58 -108.06 REMARK 500 2 LYS A 4 -66.29 73.62 REMARK 500 2 LEU A 10 -38.38 70.49 REMARK 500 2 SER A 100 -72.41 -86.26 REMARK 500 2 ASN A 101 -18.59 -142.40 REMARK 500 2 PRO A 125 32.56 -86.06 REMARK 500 2 SER A 128 26.88 -152.69 REMARK 500 2 HIS A 141 73.80 61.76 REMARK 500 3 PHE A 6 -53.84 -120.95 REMARK 500 3 GLU A 7 -76.82 61.81 REMARK 500 3 SER A 100 -74.73 -83.58 REMARK 500 3 THR A 126 165.56 75.66 REMARK 500 3 HIS A 141 -22.80 71.76 REMARK 500 4 PHE A 6 108.53 72.61 REMARK 500 4 GLU A 7 84.08 -65.87 REMARK 500 4 ILE A 8 -39.25 -175.03 REMARK 500 4 ASN A 39 3.24 80.76 REMARK 500 4 SER A 100 -76.03 -86.20 REMARK 500 4 SER A 128 -93.86 46.38 REMARK 500 5 ILE A 2 111.85 73.78 REMARK 500 5 ILE A 5 -76.83 -114.34 REMARK 500 5 SER A 100 -72.09 -94.18 REMARK 500 5 ASN A 101 -50.53 -132.25 REMARK 500 5 HIS A 141 76.33 67.35 REMARK 500 5 HIS A 144 67.73 60.57 REMARK 500 5 HIS A 145 66.96 68.34 REMARK 500 6 ILE A 5 -49.53 76.34 REMARK 500 6 ASN A 101 -40.24 -135.62 REMARK 500 6 PRO A 125 -70.40 -65.07 REMARK 500 6 HIS A 141 36.92 71.20 REMARK 500 6 HIS A 143 -172.86 66.40 REMARK 500 6 HIS A 144 155.65 74.72 REMARK 500 7 ASP A 3 -68.22 -140.88 REMARK 500 7 ILE A 5 -79.93 65.64 REMARK 500 7 PHE A 6 126.75 70.03 REMARK 500 7 ASN A 39 7.91 82.82 REMARK 500 7 ASN A 101 -33.95 -160.07 REMARK 500 7 ARG A 127 -92.77 64.11 REMARK 500 7 SER A 128 15.37 -158.41 REMARK 500 7 HIS A 141 -92.62 -120.90 REMARK 500 7 HIS A 142 -49.93 -157.54 REMARK 500 7 HIS A 143 94.03 -174.79 REMARK 500 7 HIS A 144 -98.26 58.40 REMARK 500 8 ILE A 5 73.08 75.15 REMARK 500 8 PHE A 6 -76.97 -145.08 REMARK 500 8 GLU A 7 -50.86 63.89 REMARK 500 REMARK 500 THIS ENTRY HAS 126 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 35 0.07 SIDE CHAIN REMARK 500 2 ARG A 55 0.10 SIDE CHAIN REMARK 500 3 ARG A 113 0.08 SIDE CHAIN REMARK 500 13 ARG A 97 0.08 SIDE CHAIN REMARK 500 17 ARG A 113 0.07 SIDE CHAIN REMARK 500 18 ARG A 113 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30279 RELATED DB: BMRB DBREF 5VFK A 1 138 UNP Q97ZH2 Q97ZH2_SULSO 1 138 SEQADV 5VFK LEU A 139 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK GLU A 140 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 141 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 142 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 143 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 144 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 145 UNP Q97ZH2 EXPRESSION TAG SEQADV 5VFK HIS A 146 UNP Q97ZH2 EXPRESSION TAG SEQRES 1 A 146 MET ILE ASP LYS ILE PHE GLU ILE GLY LEU LYS ASP ILE SEQRES 2 A 146 PHE SER SER SER PRO ALA GLU TYR VAL THR ILE LYS ASP SEQRES 3 A 146 ALA LEU ASP GLY LYS LEU LYS ILE ARG LEU ASN ASN ASN SEQRES 4 A 146 PHE TYR HIS GLU ILE LYS LYS ASP GLU VAL GLU LYS LEU SEQRES 5 A 146 SER SER ARG ILE PRO LEU TYR LEU TRP SER LEU VAL LYS SEQRES 6 A 146 ILE PRO PHE ILE PHE ILE LYS SER SER GLU ILE GLY GLU SEQRES 7 A 146 TYR PHE VAL SER GLY GLU GLN TRP ASN LYS LYS ALA ILE SEQRES 8 A 146 SER ILE LEU LEU GLY ARG GLU ILE SER ASN VAL ILE LEU SEQRES 9 A 146 ASN VAL ASP VAL GLU LYS LEU LEU ARG GLU TYR THR SER SEQRES 10 A 146 LEU ILE PHE ILE ILE LEU SER PRO THR ARG SER TYR THR SEQRES 11 A 146 GLU GLU THR GLU LEU SER GLU MET LEU GLU HIS HIS HIS SEQRES 12 A 146 HIS HIS HIS HELIX 1 AA1 ILE A 8 PHE A 14 1 7 HELIX 2 AA2 SER A 15 SER A 17 5 3 HELIX 3 AA3 ILE A 24 GLY A 30 1 7 HELIX 4 AA4 LYS A 45 SER A 54 1 10 HELIX 5 AA5 PRO A 57 LEU A 63 5 7 HELIX 6 AA6 GLU A 84 GLY A 96 1 13 HELIX 7 AA7 ASN A 105 TYR A 115 1 11 HELIX 8 AA8 TYR A 129 GLU A 140 1 12 SHEET 1 AA1 2 VAL A 22 THR A 23 0 SHEET 2 AA1 2 LYS A 65 ILE A 66 -1 O ILE A 66 N VAL A 22 SHEET 1 AA2 2 LYS A 33 ARG A 35 0 SHEET 2 AA2 2 TYR A 41 GLU A 43 -1 O HIS A 42 N ILE A 34 SHEET 1 AA3 4 VAL A 102 LEU A 104 0 SHEET 2 AA3 4 GLU A 78 SER A 82 -1 N TYR A 79 O ILE A 103 SHEET 3 AA3 4 PHE A 68 LYS A 72 -1 N ILE A 71 O PHE A 80 SHEET 4 AA3 4 ILE A 119 ILE A 122 1 O ILE A 122 N PHE A 70 CISPEP 1 ILE A 66 PRO A 67 1 2.47 CISPEP 2 ILE A 66 PRO A 67 2 1.18 CISPEP 3 ILE A 66 PRO A 67 3 0.51 CISPEP 4 ILE A 66 PRO A 67 4 1.63 CISPEP 5 ILE A 66 PRO A 67 5 2.35 CISPEP 6 ILE A 66 PRO A 67 6 1.11 CISPEP 7 ILE A 66 PRO A 67 7 0.56 CISPEP 8 ILE A 66 PRO A 67 8 2.38 CISPEP 9 ILE A 66 PRO A 67 9 2.81 CISPEP 10 ILE A 66 PRO A 67 10 2.69 CISPEP 11 ILE A 66 PRO A 67 11 0.20 CISPEP 12 ILE A 66 PRO A 67 12 1.09 CISPEP 13 ILE A 66 PRO A 67 13 2.18 CISPEP 14 ILE A 66 PRO A 67 14 2.47 CISPEP 15 ILE A 66 PRO A 67 15 1.70 CISPEP 16 ILE A 66 PRO A 67 16 2.53 CISPEP 17 ILE A 66 PRO A 67 17 0.73 CISPEP 18 ILE A 66 PRO A 67 18 1.80 CISPEP 19 ILE A 66 PRO A 67 19 2.50 CISPEP 20 ILE A 66 PRO A 67 20 1.28 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1