HEADER LIPID BINDING PROTEIN 18-APR-17 5VJ4 TITLE CRYSTAL STRUCTURE OF A PUTATIVE SURFACE PROTEIN ENCODED BY BTA121 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 71-445; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIA TURICATAE; SOURCE 3 ORGANISM_TAXID: 314724; SOURCE 4 STRAIN: 91E135; SOURCE 5 GENE: BTA121; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RELAPSING FEVER, LIPID BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Z.LUO,O.ASOJO REVDAT 1 29-NOV-17 5VJ4 0 JRNL AUTH Z.LUO,A.J.KELLEHER,R.DARWICHE,E.M.HUDSPETH,O.K.SHITTU, JRNL AUTH 2 A.KRISHNAVAJHALA,R.SCHNEITER,J.E.LOPEZ,O.A.ASOJO JRNL TITL CRYSTAL STRUCTURE OF BORRELIA TURICATAE PROTEIN, BTA121, A JRNL TITL 2 DIFFERENTIALLY REGULATED GENE IN THE TICK-MAMMALIAN JRNL TITL 3 TRANSMISSION CYCLE OF RELAPSING FEVER SPIROCHETES. JRNL REF SCI REP V. 7 15310 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 29127407 JRNL DOI 10.1038/S41598-017-14959-9 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1293 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1843 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.3650 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4324 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 65 REMARK 3 SOLVENT ATOMS : 7 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.16000 REMARK 3 B22 (A**2) : -2.16000 REMARK 3 B33 (A**2) : 7.00000 REMARK 3 B12 (A**2) : -1.08000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.422 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.266 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.229 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.405 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.949 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4453 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6026 ; 1.466 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 546 ; 4.836 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 210 ;34.778 ;23.857 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 739 ;17.896 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;19.132 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 679 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3331 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2190 ;13.797 ;16.266 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2734 ;17.984 ;30.367 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2263 ;18.230 ;16.992 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 18902 ;23.176 ;70.307 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26628 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 1.16000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M LITHIUM SULFATE, 50MM SODIUM REMARK 280 HEPES PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.07033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 122.14067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 91.60550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 152.67583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 30.53517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5130 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -196.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 71 REMARK 465 GLY A 72 REMARK 465 VAL A 73 REMARK 465 ARG A 74 REMARK 465 PRO A 75 REMARK 465 GLU A 76 REMARK 465 SER A 77 REMARK 465 GLY A 78 REMARK 465 VAL A 79 REMARK 465 GLY A 80 REMARK 465 PRO A 81 REMARK 465 GLU A 82 REMARK 465 SER A 83 REMARK 465 GLY A 84 REMARK 465 VAL A 85 REMARK 465 GLY A 86 REMARK 465 PRO A 87 REMARK 465 GLU A 88 REMARK 465 ALA A 89 REMARK 465 GLY A 90 REMARK 465 VAL A 91 REMARK 465 GLY A 92 REMARK 465 PRO A 93 REMARK 465 GLU A 94 REMARK 465 ALA A 95 REMARK 465 GLY A 96 REMARK 465 VAL A 97 REMARK 465 GLY A 98 REMARK 465 PRO A 99 REMARK 465 GLU A 100 REMARK 465 SER A 101 REMARK 465 GLY A 102 REMARK 465 VAL A 103 REMARK 465 GLY A 104 REMARK 465 PRO A 105 REMARK 465 GLU A 106 REMARK 465 ALA A 107 REMARK 465 GLY A 108 REMARK 465 VAL A 109 REMARK 465 GLY A 110 REMARK 465 PRO A 111 REMARK 465 GLU A 112 REMARK 465 ALA A 113 REMARK 465 GLY A 114 REMARK 465 VAL A 115 REMARK 465 GLY A 116 REMARK 465 PRO A 117 REMARK 465 GLU A 118 REMARK 465 SER A 119 REMARK 465 GLY A 120 REMARK 465 VAL A 121 REMARK 465 GLY A 122 REMARK 465 PRO A 123 REMARK 465 GLU A 124 REMARK 465 SER A 125 REMARK 465 GLY A 126 REMARK 465 VAL A 127 REMARK 465 GLY A 128 REMARK 465 PRO A 129 REMARK 465 GLU A 130 REMARK 465 ALA A 131 REMARK 465 GLY A 132 REMARK 465 VAL A 133 REMARK 465 ARG A 134 REMARK 465 PRO A 135 REMARK 465 GLU A 136 REMARK 465 ALA A 137 REMARK 465 GLY A 138 REMARK 465 VAL A 139 REMARK 465 ARG A 140 REMARK 465 PRO A 141 REMARK 465 GLU A 142 REMARK 465 ALA A 143 REMARK 465 GLY A 144 REMARK 465 ALA A 145 REMARK 465 GLY A 146 REMARK 465 THR A 147 REMARK 465 ASP A 148 REMARK 465 THR A 149 REMARK 465 GLU A 150 REMARK 465 THR A 151 REMARK 465 GLU A 152 REMARK 465 GLU A 153 REMARK 465 GLU A 154 REMARK 465 ILE A 155 REMARK 465 GLU A 156 REMARK 465 GLU A 157 REMARK 465 VAL A 158 REMARK 465 VAL A 159 REMARK 465 GLY A 160 REMARK 465 ASP A 161 REMARK 465 ALA A 437 REMARK 465 ARG A 438 REMARK 465 GLY A 439 REMARK 465 ALA A 440 REMARK 465 THR A 441 REMARK 465 GLY A 442 REMARK 465 SER A 443 REMARK 465 GLY A 444 REMARK 465 SER A 445 REMARK 465 SER B 71 REMARK 465 GLY B 72 REMARK 465 VAL B 73 REMARK 465 ARG B 74 REMARK 465 PRO B 75 REMARK 465 GLU B 76 REMARK 465 SER B 77 REMARK 465 GLY B 78 REMARK 465 VAL B 79 REMARK 465 GLY B 80 REMARK 465 PRO B 81 REMARK 465 GLU B 82 REMARK 465 SER B 83 REMARK 465 GLY B 84 REMARK 465 VAL B 85 REMARK 465 GLY B 86 REMARK 465 PRO B 87 REMARK 465 GLU B 88 REMARK 465 ALA B 89 REMARK 465 GLY B 90 REMARK 465 VAL B 91 REMARK 465 GLY B 92 REMARK 465 PRO B 93 REMARK 465 GLU B 94 REMARK 465 ALA B 95 REMARK 465 GLY B 96 REMARK 465 VAL B 97 REMARK 465 GLY B 98 REMARK 465 PRO B 99 REMARK 465 GLU B 100 REMARK 465 SER B 101 REMARK 465 GLY B 102 REMARK 465 VAL B 103 REMARK 465 GLY B 104 REMARK 465 PRO B 105 REMARK 465 GLU B 106 REMARK 465 ALA B 107 REMARK 465 GLY B 108 REMARK 465 VAL B 109 REMARK 465 GLY B 110 REMARK 465 PRO B 111 REMARK 465 GLU B 112 REMARK 465 ALA B 113 REMARK 465 GLY B 114 REMARK 465 VAL B 115 REMARK 465 GLY B 116 REMARK 465 PRO B 117 REMARK 465 GLU B 118 REMARK 465 SER B 119 REMARK 465 GLY B 120 REMARK 465 VAL B 121 REMARK 465 GLY B 122 REMARK 465 PRO B 123 REMARK 465 GLU B 124 REMARK 465 SER B 125 REMARK 465 GLY B 126 REMARK 465 VAL B 127 REMARK 465 GLY B 128 REMARK 465 PRO B 129 REMARK 465 GLU B 130 REMARK 465 ALA B 131 REMARK 465 GLY B 132 REMARK 465 VAL B 133 REMARK 465 ARG B 134 REMARK 465 PRO B 135 REMARK 465 GLU B 136 REMARK 465 ALA B 137 REMARK 465 GLY B 138 REMARK 465 VAL B 139 REMARK 465 ARG B 140 REMARK 465 PRO B 141 REMARK 465 GLU B 142 REMARK 465 ALA B 143 REMARK 465 GLY B 144 REMARK 465 ALA B 145 REMARK 465 GLY B 146 REMARK 465 THR B 147 REMARK 465 ASP B 148 REMARK 465 THR B 149 REMARK 465 GLU B 150 REMARK 465 THR B 151 REMARK 465 GLU B 152 REMARK 465 GLU B 153 REMARK 465 GLU B 154 REMARK 465 ILE B 155 REMARK 465 GLU B 156 REMARK 465 GLU B 157 REMARK 465 VAL B 158 REMARK 465 VAL B 159 REMARK 465 GLY B 160 REMARK 465 ASP B 161 REMARK 465 GLU B 162 REMARK 465 LYS B 436 REMARK 465 ALA B 437 REMARK 465 ARG B 438 REMARK 465 GLY B 439 REMARK 465 ALA B 440 REMARK 465 THR B 441 REMARK 465 GLY B 442 REMARK 465 SER B 443 REMARK 465 GLY B 444 REMARK 465 SER B 445 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 163 CG CD OE1 OE2 REMARK 470 VAL A 186 CG1 CG2 REMARK 470 ASP A 204 CG OD1 OD2 REMARK 470 ASP A 216 CG OD1 OD2 REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 GLU A 246 CG CD OE1 OE2 REMARK 470 LYS A 436 CG CD CE NZ REMARK 470 LEU B 177 CG CD1 CD2 REMARK 470 LEU B 181 CG CD1 CD2 REMARK 470 PHE B 184 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG B 191 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 LEU B 201 CG CD1 CD2 REMARK 470 ILE B 206 CG1 CG2 CD1 REMARK 470 LYS B 212 CG CD CE NZ REMARK 470 LYS B 224 CG CD CE NZ REMARK 470 VAL B 248 CG1 CG2 REMARK 470 LYS B 249 CG CD CE NZ REMARK 470 ARG B 302 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 397 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 187 -179.32 -55.27 REMARK 500 LYS A 212 3.24 -67.05 REMARK 500 PRO A 301 -15.70 -47.47 REMARK 500 LEU B 168 -76.55 -54.19 REMARK 500 ASP B 312 -178.52 -66.44 REMARK 500 VAL B 376 -123.02 51.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 507 DBREF1 5VJ4 A 71 445 UNP A0A0R9P931_BORT9 DBREF2 5VJ4 A A0A0R9P931 71 445 DBREF1 5VJ4 B 71 445 UNP A0A0R9P931_BORT9 DBREF2 5VJ4 B A0A0R9P931 71 445 SEQRES 1 A 375 SER GLY VAL ARG PRO GLU SER GLY VAL GLY PRO GLU SER SEQRES 2 A 375 GLY VAL GLY PRO GLU ALA GLY VAL GLY PRO GLU ALA GLY SEQRES 3 A 375 VAL GLY PRO GLU SER GLY VAL GLY PRO GLU ALA GLY VAL SEQRES 4 A 375 GLY PRO GLU ALA GLY VAL GLY PRO GLU SER GLY VAL GLY SEQRES 5 A 375 PRO GLU SER GLY VAL GLY PRO GLU ALA GLY VAL ARG PRO SEQRES 6 A 375 GLU ALA GLY VAL ARG PRO GLU ALA GLY ALA GLY THR ASP SEQRES 7 A 375 THR GLU THR GLU GLU GLU ILE GLU GLU VAL VAL GLY ASP SEQRES 8 A 375 GLU GLU ALA LEU ALA TYR LEU ASN GLU THR VAL ILE ASP SEQRES 9 A 375 PRO LYS LEU ILE ALA LEU LEU ASP ASP PHE GLY VAL SER SEQRES 10 A 375 ARG SER GLY ARG LYS ALA ILE SER TYR ILE GLN GLY ASN SEQRES 11 A 375 LEU THR SER ASP VAL ILE TYR ASP ARG LEU ASN LYS LEU SEQRES 12 A 375 GLY ALA ASP VAL VAL ILE GLU LYS ILE ILE LYS PRO THR SEQRES 13 A 375 VAL SER LEU LEU LYS THR LYS GLY GLU ALA LEU LYS ILE SEQRES 14 A 375 ILE GLU ASP PRO THR ASN GLU GLY VAL LYS THR ARG LEU SEQRES 15 A 375 GLN ASN MSE CYS LYS ARG TYR ASP GLY LEU VAL LYS GLY SEQRES 16 A 375 ILE GLY TYR ASP PHE PHE HIS GLY SER ILE GLY THR ASP SEQRES 17 A 375 ARG PHE ALA GLN ALA VAL VAL TYR TYR ALA PRO ARG PHE SEQRES 18 A 375 ARG LYS PHE LYS GLU ILE VAL LYS ASN PRO ARG VAL MSE SEQRES 19 A 375 ASP ASP ILE TYR GLY TRP LEU ASP ALA ASP ASP ARG ALA SEQRES 20 A 375 THR ILE ASN GLU ILE GLY LYS ILE VAL ILE ASN ALA THR SEQRES 21 A 375 TYR ASP LYS ASP LYS PHE ASN ASN VAL LEU ASN SER VAL SEQRES 22 A 375 GLY VAL TYR TYR VAL VAL ARG MSE ILE ASP ILE TYR ARG SEQRES 23 A 375 GLY VAL LYS ILE GLU HIS ASP GLU ALA LEU ASN ALA ILE SEQRES 24 A 375 THR THR VAL PRO ASP GLY VAL VAL LYS GLN ASP LEU GLN SEQRES 25 A 375 ALA ARG LEU ASN ARG PHE LYS GLY GLU TYR TYR SER ASN SEQRES 26 A 375 ILE ARG GLY THR PHE LYS GLY PHE THR ASP GLY LEU HIS SEQRES 27 A 375 PHE GLN ILE MSE THR ASP GLY ASP LYS TYR ARG ASN TYR SEQRES 28 A 375 PHE ILE ILE LEU LYS PHE ASP ALA GLN ALA ALA ARG VAL SEQRES 29 A 375 ALA LYS ALA ARG GLY ALA THR GLY SER GLY SER SEQRES 1 B 375 SER GLY VAL ARG PRO GLU SER GLY VAL GLY PRO GLU SER SEQRES 2 B 375 GLY VAL GLY PRO GLU ALA GLY VAL GLY PRO GLU ALA GLY SEQRES 3 B 375 VAL GLY PRO GLU SER GLY VAL GLY PRO GLU ALA GLY VAL SEQRES 4 B 375 GLY PRO GLU ALA GLY VAL GLY PRO GLU SER GLY VAL GLY SEQRES 5 B 375 PRO GLU SER GLY VAL GLY PRO GLU ALA GLY VAL ARG PRO SEQRES 6 B 375 GLU ALA GLY VAL ARG PRO GLU ALA GLY ALA GLY THR ASP SEQRES 7 B 375 THR GLU THR GLU GLU GLU ILE GLU GLU VAL VAL GLY ASP SEQRES 8 B 375 GLU GLU ALA LEU ALA TYR LEU ASN GLU THR VAL ILE ASP SEQRES 9 B 375 PRO LYS LEU ILE ALA LEU LEU ASP ASP PHE GLY VAL SER SEQRES 10 B 375 ARG SER GLY ARG LYS ALA ILE SER TYR ILE GLN GLY ASN SEQRES 11 B 375 LEU THR SER ASP VAL ILE TYR ASP ARG LEU ASN LYS LEU SEQRES 12 B 375 GLY ALA ASP VAL VAL ILE GLU LYS ILE ILE LYS PRO THR SEQRES 13 B 375 VAL SER LEU LEU LYS THR LYS GLY GLU ALA LEU LYS ILE SEQRES 14 B 375 ILE GLU ASP PRO THR ASN GLU GLY VAL LYS THR ARG LEU SEQRES 15 B 375 GLN ASN MSE CYS LYS ARG TYR ASP GLY LEU VAL LYS GLY SEQRES 16 B 375 ILE GLY TYR ASP PHE PHE HIS GLY SER ILE GLY THR ASP SEQRES 17 B 375 ARG PHE ALA GLN ALA VAL VAL TYR TYR ALA PRO ARG PHE SEQRES 18 B 375 ARG LYS PHE LYS GLU ILE VAL LYS ASN PRO ARG VAL MSE SEQRES 19 B 375 ASP ASP ILE TYR GLY TRP LEU ASP ALA ASP ASP ARG ALA SEQRES 20 B 375 THR ILE ASN GLU ILE GLY LYS ILE VAL ILE ASN ALA THR SEQRES 21 B 375 TYR ASP LYS ASP LYS PHE ASN ASN VAL LEU ASN SER VAL SEQRES 22 B 375 GLY VAL TYR TYR VAL VAL ARG MSE ILE ASP ILE TYR ARG SEQRES 23 B 375 GLY VAL LYS ILE GLU HIS ASP GLU ALA LEU ASN ALA ILE SEQRES 24 B 375 THR THR VAL PRO ASP GLY VAL VAL LYS GLN ASP LEU GLN SEQRES 25 B 375 ALA ARG LEU ASN ARG PHE LYS GLY GLU TYR TYR SER ASN SEQRES 26 B 375 ILE ARG GLY THR PHE LYS GLY PHE THR ASP GLY LEU HIS SEQRES 27 B 375 PHE GLN ILE MSE THR ASP GLY ASP LYS TYR ARG ASN TYR SEQRES 28 B 375 PHE ILE ILE LEU LYS PHE ASP ALA GLN ALA ALA ARG VAL SEQRES 29 B 375 ALA LYS ALA ARG GLY ALA THR GLY SER GLY SER MODRES 5VJ4 MSE A 255 MET MODIFIED RESIDUE MODRES 5VJ4 MSE A 304 MET MODIFIED RESIDUE MODRES 5VJ4 MSE A 351 MET MODIFIED RESIDUE MODRES 5VJ4 MSE A 412 MET MODIFIED RESIDUE MODRES 5VJ4 MSE B 255 MET MODIFIED RESIDUE MODRES 5VJ4 MSE B 304 MET MODIFIED RESIDUE MODRES 5VJ4 MSE B 351 MET MODIFIED RESIDUE MODRES 5VJ4 MSE B 412 MET MODIFIED RESIDUE HET MSE A 255 8 HET MSE A 304 8 HET MSE A 351 8 HET MSE A 412 8 HET MSE B 255 8 HET MSE B 304 8 HET MSE B 351 8 HET MSE B 412 8 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 A 506 5 HET SO4 B 501 5 HET SO4 B 502 5 HET SO4 B 503 5 HET SO4 B 504 5 HET SO4 B 505 5 HET SO4 B 506 5 HET SO4 B 507 5 HETNAM MSE SELENOMETHIONINE HETNAM SO4 SULFATE ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 SO4 13(O4 S 2-) FORMUL 16 HOH *7(H2 O) HELIX 1 AA1 ASP A 174 GLY A 185 1 12 HELIX 2 AA2 SER A 187 GLY A 199 1 13 HELIX 3 AA3 THR A 202 LYS A 212 1 11 HELIX 4 AA4 GLY A 214 ILE A 222 1 9 HELIX 5 AA5 ILE A 222 ASP A 242 1 21 HELIX 6 AA6 ASN A 245 HIS A 272 1 28 HELIX 7 AA7 GLY A 276 VAL A 285 1 10 HELIX 8 AA8 TYR A 287 LYS A 293 1 7 HELIX 9 AA9 LYS A 293 ASN A 300 1 8 HELIX 10 AB1 PRO A 301 TRP A 310 5 10 HELIX 11 AB2 ASP A 312 ILE A 327 1 16 HELIX 12 AB3 ASP A 332 VAL A 372 1 41 HELIX 13 AB4 VAL A 377 ASP A 405 1 29 HELIX 14 AB5 ASP A 414 LYS A 436 1 23 HELIX 15 AB6 ASP B 174 GLY B 185 1 12 HELIX 16 AB7 SER B 187 GLY B 199 1 13 HELIX 17 AB8 THR B 202 LEU B 213 1 12 HELIX 18 AB9 GLY B 214 ILE B 222 1 9 HELIX 19 AC1 ILE B 222 ASP B 242 1 21 HELIX 20 AC2 ASN B 245 HIS B 272 1 28 HELIX 21 AC3 GLY B 276 VAL B 285 1 10 HELIX 22 AC4 TYR B 287 LYS B 293 1 7 HELIX 23 AC5 LYS B 293 ASN B 300 1 8 HELIX 24 AC6 PRO B 301 ASP B 306 5 6 HELIX 25 AC7 ILE B 307 LEU B 311 5 5 HELIX 26 AC8 ASP B 312 ILE B 327 1 16 HELIX 27 AC9 ASP B 332 GLY B 344 1 13 HELIX 28 AD1 GLY B 344 VAL B 372 1 29 HELIX 29 AD2 VAL B 377 ASP B 405 1 29 HELIX 30 AD3 ASP B 414 ALA B 435 1 22 LINK C ASN A 254 N MSE A 255 1555 1555 1.33 LINK C MSE A 255 N CYS A 256 1555 1555 1.33 LINK C VAL A 303 N MSE A 304 1555 1555 1.34 LINK C MSE A 304 N ASP A 305 1555 1555 1.33 LINK C ARG A 350 N MSE A 351 1555 1555 1.32 LINK C MSE A 351 N ILE A 352 1555 1555 1.33 LINK C ILE A 411 N MSE A 412 1555 1555 1.33 LINK C MSE A 412 N THR A 413 1555 1555 1.34 LINK C ASN B 254 N MSE B 255 1555 1555 1.33 LINK C MSE B 255 N CYS B 256 1555 1555 1.34 LINK C VAL B 303 N MSE B 304 1555 1555 1.34 LINK C MSE B 304 N ASP B 305 1555 1555 1.32 LINK C ARG B 350 N MSE B 351 1555 1555 1.33 LINK C MSE B 351 N ILE B 352 1555 1555 1.33 LINK C ILE B 411 N MSE B 412 1555 1555 1.33 LINK C MSE B 412 N THR B 413 1555 1555 1.33 SITE 1 AC1 6 VAL A 172 ILE A 173 ASP A 174 GLN A 198 SITE 2 AC1 6 SER A 203 ARG A 302 SITE 1 AC2 6 ILE A 275 GLY A 276 THR A 277 ASP A 278 SITE 2 AC2 6 ARG A 279 ARG A 419 SITE 1 AC3 4 LYS A 293 ASP A 312 ALA A 313 ARG A 316 SITE 1 AC4 5 ARG A 209 LEU A 213 GLY A 276 THR A 277 SITE 2 AC4 5 ARG B 433 SITE 1 AC5 4 ARG A 350 THR A 413 ASP A 414 GLY A 415 SITE 1 AC6 3 ASN A 300 PRO A 301 ARG A 302 SITE 1 AC7 3 ARG A 251 ARG B 251 ARG B 258 SITE 1 AC8 4 LYS B 293 ASP B 312 ALA B 313 ARG B 316 SITE 1 AC9 6 THR B 171 VAL B 172 ILE B 173 ASP B 174 SITE 2 AC9 6 GLN B 198 SER B 203 SITE 1 AD1 3 THR B 413 ASP B 414 GLY B 415 SITE 1 AD2 4 GLY B 276 ASP B 278 ARG B 279 ARG B 419 SITE 1 AD3 6 ARG A 433 ARG B 209 LEU B 213 PHE B 270 SITE 2 AD3 6 GLY B 276 THR B 277 SITE 1 AD4 3 ASN B 300 PRO B 301 ARG B 302 CRYST1 102.055 102.055 183.211 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009799 0.005657 0.000000 0.00000 SCALE2 0.000000 0.011314 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005458 0.00000