HEADER LYASE 19-APR-17 5VJF TITLE CLASS II FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE OF HELICOBACTER PYLORI TITLE 2 WITH DHAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-BISPHOSPHATE ALDOLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FBPA,FRUCTOSE-1,6-BISPHOSPHATE ALDOLASE; COMPND 5 EC: 4.1.2.13; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI (STRAIN ATCC 700392 / SOURCE 3 26695); SOURCE 4 ORGANISM_TAXID: 85962; SOURCE 5 STRAIN: ATCC 700392 / 26695; SOURCE 6 ATCC: 700392; SOURCE 7 GENE: FBA, HP_0176; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOLYSIS, METALLOENZYME, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.COINCON,J.SYGUSCH REVDAT 4 04-OCT-23 5VJF 1 LINK REVDAT 3 08-JAN-20 5VJF 1 REMARK REVDAT 2 30-MAY-18 5VJF 1 JRNL REVDAT 1 11-APR-18 5VJF 0 JRNL AUTH B.JACQUES,M.COINCON,J.SYGUSCH JRNL TITL ACTIVE SITE REMODELING DURING THE CATALYTIC CYCLE IN JRNL TITL 2 METAL-DEPENDENT FRUCTOSE-1,6-BISPHOSPHATE ALDOLASES. JRNL REF J. BIOL. CHEM. V. 293 7737 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29593097 JRNL DOI 10.1074/JBC.RA117.001098 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1134 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 50194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.140 REMARK 3 R VALUE (WORKING SET) : 0.137 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.180 REMARK 3 FREE R VALUE TEST SET COUNT : 5111 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4965 - 5.7427 0.94 1522 161 0.1831 0.2054 REMARK 3 2 5.7427 - 4.5604 0.97 1557 159 0.1308 0.1406 REMARK 3 3 4.5604 - 3.9845 0.98 1529 170 0.1160 0.1437 REMARK 3 4 3.9845 - 3.6205 0.99 1528 199 0.1252 0.1313 REMARK 3 5 3.6205 - 3.3611 0.98 1562 157 0.1198 0.1523 REMARK 3 6 3.3611 - 3.1631 0.99 1583 153 0.1288 0.1764 REMARK 3 7 3.1631 - 3.0047 0.99 1529 166 0.1385 0.1757 REMARK 3 8 3.0047 - 2.8740 0.99 1569 166 0.1287 0.1601 REMARK 3 9 2.8740 - 2.7633 0.99 1553 185 0.1320 0.1735 REMARK 3 10 2.7633 - 2.6680 1.00 1541 180 0.1323 0.1719 REMARK 3 11 2.6680 - 2.5846 0.99 1548 190 0.1317 0.1805 REMARK 3 12 2.5846 - 2.5107 1.00 1538 186 0.1350 0.1894 REMARK 3 13 2.5107 - 2.4446 0.99 1582 167 0.1325 0.1784 REMARK 3 14 2.4446 - 2.3850 0.99 1515 187 0.1280 0.2048 REMARK 3 15 2.3850 - 2.3308 0.99 1525 178 0.1321 0.2009 REMARK 3 16 2.3308 - 2.2812 0.99 1560 187 0.1323 0.1736 REMARK 3 17 2.2812 - 2.2356 0.98 1519 191 0.1358 0.1680 REMARK 3 18 2.2356 - 2.1934 0.98 1498 150 0.1280 0.1833 REMARK 3 19 2.1934 - 2.1542 0.98 1532 190 0.1276 0.1611 REMARK 3 20 2.1542 - 2.1177 0.96 1481 201 0.1402 0.1801 REMARK 3 21 2.1177 - 2.0836 0.95 1487 147 0.1401 0.1756 REMARK 3 22 2.0836 - 2.0515 0.95 1496 151 0.1429 0.1965 REMARK 3 23 2.0515 - 2.0213 0.94 1504 157 0.1469 0.2090 REMARK 3 24 2.0213 - 1.9929 0.93 1418 168 0.1516 0.1917 REMARK 3 25 1.9929 - 1.9659 0.94 1439 169 0.1557 0.2144 REMARK 3 26 1.9659 - 1.9404 0.93 1463 185 0.1527 0.2023 REMARK 3 27 1.9404 - 1.9161 0.92 1417 155 0.1549 0.1979 REMARK 3 28 1.9161 - 1.8931 0.91 1418 173 0.1656 0.2285 REMARK 3 29 1.8931 - 1.8710 0.89 1394 148 0.1845 0.2101 REMARK 3 30 1.8710 - 1.8500 0.82 1276 135 0.1892 0.2696 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4655 REMARK 3 ANGLE : 0.924 6255 REMARK 3 CHIRALITY : 0.055 694 REMARK 3 PLANARITY : 0.004 812 REMARK 3 DIHEDRAL : 12.559 1750 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 31 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.9944 -13.1367 2.4407 REMARK 3 T TENSOR REMARK 3 T11: 0.0207 T22: 0.0713 REMARK 3 T33: 0.1005 T12: -0.0164 REMARK 3 T13: 0.0086 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 0.1086 L22: 0.1812 REMARK 3 L33: 0.1937 L12: -0.0354 REMARK 3 L13: 0.1263 L23: 0.0470 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: 0.0323 S13: -0.1759 REMARK 3 S21: -0.0200 S22: 0.0087 S23: 0.0626 REMARK 3 S31: 0.0572 S32: -0.1424 S33: 0.0037 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8395 -2.3723 13.8110 REMARK 3 T TENSOR REMARK 3 T11: -0.0546 T22: -0.0513 REMARK 3 T33: -0.0318 T12: -0.0189 REMARK 3 T13: -0.0427 T23: -0.0465 REMARK 3 L TENSOR REMARK 3 L11: 0.1593 L22: 0.1558 REMARK 3 L33: 0.3124 L12: -0.0168 REMARK 3 L13: 0.0255 L23: 0.0810 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: -0.0182 S13: 0.0028 REMARK 3 S21: 0.0360 S22: 0.0031 S23: 0.0355 REMARK 3 S31: -0.0362 S32: -0.0629 S33: -0.2461 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.0171 -8.9775 15.1756 REMARK 3 T TENSOR REMARK 3 T11: -0.0626 T22: -0.0622 REMARK 3 T33: 0.0134 T12: -0.0831 REMARK 3 T13: -0.0237 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 0.0320 L22: 0.2436 REMARK 3 L33: 0.2198 L12: -0.0090 REMARK 3 L13: 0.0113 L23: 0.1095 REMARK 3 S TENSOR REMARK 3 S11: -0.0114 S12: -0.0086 S13: -0.0197 REMARK 3 S21: 0.0533 S22: -0.0061 S23: 0.0337 REMARK 3 S31: 0.0480 S32: -0.0435 S33: -0.0950 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.4495 -13.2227 7.9503 REMARK 3 T TENSOR REMARK 3 T11: -0.0247 T22: 0.0143 REMARK 3 T33: 0.0496 T12: -0.0419 REMARK 3 T13: -0.0305 T23: -0.0608 REMARK 3 L TENSOR REMARK 3 L11: 0.1759 L22: 0.0791 REMARK 3 L33: 0.2040 L12: -0.0589 REMARK 3 L13: -0.1190 L23: -0.0462 REMARK 3 S TENSOR REMARK 3 S11: 0.0305 S12: 0.0160 S13: -0.0829 REMARK 3 S21: 0.0264 S22: 0.0130 S23: -0.0775 REMARK 3 S31: 0.0151 S32: 0.0803 S33: -0.0223 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 97 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5634 -6.0143 0.6228 REMARK 3 T TENSOR REMARK 3 T11: 0.0134 T22: 0.0339 REMARK 3 T33: 0.0431 T12: -0.0229 REMARK 3 T13: -0.0038 T23: 0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.6090 L22: 0.4495 REMARK 3 L33: 0.6687 L12: -0.0317 REMARK 3 L13: 0.4095 L23: 0.0337 REMARK 3 S TENSOR REMARK 3 S11: -0.0533 S12: 0.0972 S13: 0.0768 REMARK 3 S21: -0.0555 S22: 0.0337 S23: -0.0906 REMARK 3 S31: -0.0798 S32: 0.1317 S33: -0.1469 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 110 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1872 -13.3137 -4.6144 REMARK 3 T TENSOR REMARK 3 T11: 0.0071 T22: 0.0247 REMARK 3 T33: 0.0445 T12: 0.0018 REMARK 3 T13: 0.0582 T23: -0.0766 REMARK 3 L TENSOR REMARK 3 L11: 0.8814 L22: 0.6148 REMARK 3 L33: 0.3767 L12: -0.3454 REMARK 3 L13: 0.1415 L23: -0.0336 REMARK 3 S TENSOR REMARK 3 S11: 0.0507 S12: 0.1173 S13: 0.0699 REMARK 3 S21: -0.0839 S22: 0.0125 S23: -0.2306 REMARK 3 S31: -0.0183 S32: 0.1284 S33: 0.1808 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 128 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2949 -3.0691 -3.4083 REMARK 3 T TENSOR REMARK 3 T11: 0.0079 T22: 0.0159 REMARK 3 T33: 0.0481 T12: -0.0040 REMARK 3 T13: 0.0431 T23: -0.0553 REMARK 3 L TENSOR REMARK 3 L11: 0.9927 L22: 0.3700 REMARK 3 L33: 1.1067 L12: -0.5698 REMARK 3 L13: 0.1582 L23: 0.1245 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: 0.0353 S13: 0.1790 REMARK 3 S21: -0.0820 S22: 0.0142 S23: -0.0506 REMARK 3 S31: -0.1540 S32: -0.0271 S33: -0.2951 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 167 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3695 -6.0167 -14.3652 REMARK 3 T TENSOR REMARK 3 T11: 0.1368 T22: 0.1396 REMARK 3 T33: 0.0814 T12: -0.0159 REMARK 3 T13: 0.0444 T23: -0.0501 REMARK 3 L TENSOR REMARK 3 L11: 0.0495 L22: 0.0242 REMARK 3 L33: 0.1548 L12: 0.0102 REMARK 3 L13: 0.0514 L23: -0.0200 REMARK 3 S TENSOR REMARK 3 S11: 0.0127 S12: 0.0915 S13: -0.0081 REMARK 3 S21: -0.1196 S22: -0.0268 S23: -0.0475 REMARK 3 S31: -0.0323 S32: 0.0567 S33: -0.0834 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 168 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6613 -5.6360 -5.9101 REMARK 3 T TENSOR REMARK 3 T11: 0.0558 T22: -0.0326 REMARK 3 T33: 0.0359 T12: 0.0091 REMARK 3 T13: -0.0077 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 0.0969 L22: 0.1853 REMARK 3 L33: 0.2149 L12: -0.0373 REMARK 3 L13: -0.1342 L23: 0.1218 REMARK 3 S TENSOR REMARK 3 S11: 0.0427 S12: 0.0127 S13: 0.0437 REMARK 3 S21: -0.0732 S22: 0.0149 S23: -0.0244 REMARK 3 S31: -0.1048 S32: 0.0207 S33: 0.0617 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.3769 13.4187 -3.6542 REMARK 3 T TENSOR REMARK 3 T11: 0.4216 T22: 0.0929 REMARK 3 T33: 0.2268 T12: 0.0396 REMARK 3 T13: 0.0502 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.0636 L22: 0.0128 REMARK 3 L33: 0.0979 L12: 0.0223 REMARK 3 L13: 0.0135 L23: -0.0181 REMARK 3 S TENSOR REMARK 3 S11: 0.0799 S12: 0.0317 S13: 0.1451 REMARK 3 S21: -0.0580 S22: 0.0104 S23: -0.0006 REMARK 3 S31: -0.0737 S32: -0.0113 S33: 0.1029 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 193 THROUGH 203 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.8740 -1.1926 -14.3444 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.1421 REMARK 3 T33: 0.0002 T12: 0.0531 REMARK 3 T13: 0.0029 T23: -0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.0622 L22: 0.0062 REMARK 3 L33: 0.0435 L12: 0.0040 REMARK 3 L13: -0.0329 L23: -0.0143 REMARK 3 S TENSOR REMARK 3 S11: 0.0582 S12: 0.0758 S13: 0.0363 REMARK 3 S21: -0.1021 S22: -0.0138 S23: 0.0104 REMARK 3 S31: -0.1563 S32: -0.0377 S33: 0.0537 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 204 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.4191 1.4573 -1.1829 REMARK 3 T TENSOR REMARK 3 T11: 0.0350 T22: 0.0042 REMARK 3 T33: 0.0229 T12: 0.0192 REMARK 3 T13: -0.0121 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 0.0673 L22: 0.1105 REMARK 3 L33: 0.1672 L12: -0.0491 REMARK 3 L13: 0.0574 L23: -0.1065 REMARK 3 S TENSOR REMARK 3 S11: -0.0339 S12: 0.0054 S13: 0.0186 REMARK 3 S21: 0.0402 S22: 0.0051 S23: 0.0128 REMARK 3 S31: -0.0735 S32: -0.0228 S33: 0.0147 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 225 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2749 19.1063 12.8674 REMARK 3 T TENSOR REMARK 3 T11: 0.1584 T22: 0.0277 REMARK 3 T33: 0.0566 T12: 0.0842 REMARK 3 T13: -0.0119 T23: 0.0342 REMARK 3 L TENSOR REMARK 3 L11: 0.0077 L22: 0.1716 REMARK 3 L33: 0.0095 L12: -0.0365 REMARK 3 L13: 0.0092 L23: -0.0410 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0249 S13: 0.0566 REMARK 3 S21: -0.0403 S22: 0.0171 S23: 0.0711 REMARK 3 S31: -0.0615 S32: -0.0319 S33: -0.0637 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 226 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.8458 19.1659 6.9260 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.0967 REMARK 3 T33: 0.1486 T12: 0.0092 REMARK 3 T13: 0.0062 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 0.0186 L22: 0.0001 REMARK 3 L33: 0.0144 L12: -0.0026 REMARK 3 L13: 0.0170 L23: -0.0013 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: 0.0719 S13: 0.0926 REMARK 3 S21: -0.0230 S22: -0.0247 S23: -0.0880 REMARK 3 S31: -0.1645 S32: 0.0447 S33: 0.0004 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6742 5.9056 -4.1393 REMARK 3 T TENSOR REMARK 3 T11: 0.1278 T22: 0.1872 REMARK 3 T33: 0.0788 T12: 0.0810 REMARK 3 T13: -0.0245 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.0598 L22: 0.0389 REMARK 3 L33: 0.0320 L12: -0.0232 REMARK 3 L13: 0.0059 L23: -0.0328 REMARK 3 S TENSOR REMARK 3 S11: -0.0069 S12: 0.0308 S13: 0.0270 REMARK 3 S21: -0.0525 S22: 0.0098 S23: 0.0605 REMARK 3 S31: -0.0664 S32: -0.0729 S33: 0.0445 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 248 THROUGH 272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.9549 9.8058 13.9201 REMARK 3 T TENSOR REMARK 3 T11: -0.0014 T22: -0.1569 REMARK 3 T33: 0.0136 T12: 0.0882 REMARK 3 T13: -0.0137 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 0.1288 L22: 0.1061 REMARK 3 L33: 0.1915 L12: -0.0335 REMARK 3 L13: 0.0789 L23: -0.1359 REMARK 3 S TENSOR REMARK 3 S11: -0.0214 S12: 0.0066 S13: 0.0732 REMARK 3 S21: 0.0409 S22: 0.0082 S23: 0.0458 REMARK 3 S31: -0.0968 S32: -0.0203 S33: 0.0700 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 273 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6714 6.1240 19.2083 REMARK 3 T TENSOR REMARK 3 T11: 0.0263 T22: 0.0303 REMARK 3 T33: 0.0509 T12: 0.0422 REMARK 3 T13: -0.0289 T23: -0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.1192 L22: 0.1635 REMARK 3 L33: 0.1108 L12: -0.0658 REMARK 3 L13: -0.0020 L23: -0.0104 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: 0.0225 S13: -0.0045 REMARK 3 S21: 0.0293 S22: 0.0073 S23: 0.0256 REMARK 3 S31: -0.0432 S32: -0.0907 S33: 0.0290 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9710 -12.9658 47.1264 REMARK 3 T TENSOR REMARK 3 T11: 0.0497 T22: 0.1033 REMARK 3 T33: 0.0821 T12: 0.0389 REMARK 3 T13: -0.0072 T23: 0.0769 REMARK 3 L TENSOR REMARK 3 L11: 0.1396 L22: 0.0459 REMARK 3 L33: 0.0583 L12: 0.0794 REMARK 3 L13: 0.0374 L23: 0.0214 REMARK 3 S TENSOR REMARK 3 S11: 0.0685 S12: -0.0294 S13: -0.0824 REMARK 3 S21: 0.0041 S22: -0.0409 S23: -0.0455 REMARK 3 S31: 0.1485 S32: 0.0724 S33: -0.0431 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 16 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0171 -2.3872 36.2078 REMARK 3 T TENSOR REMARK 3 T11: -0.0151 T22: 0.0268 REMARK 3 T33: -0.0240 T12: 0.0028 REMARK 3 T13: 0.0064 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 0.2054 L22: 0.1702 REMARK 3 L33: 0.4284 L12: -0.0183 REMARK 3 L13: 0.1494 L23: -0.0173 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: 0.0149 S13: -0.0143 REMARK 3 S21: -0.0536 S22: -0.0129 S23: -0.0415 REMARK 3 S31: -0.0202 S32: 0.1171 S33: 0.1564 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8024 -1.7767 33.4216 REMARK 3 T TENSOR REMARK 3 T11: -0.0018 T22: 0.0221 REMARK 3 T33: 0.0054 T12: 0.0125 REMARK 3 T13: -0.0374 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 0.0219 L22: 0.0717 REMARK 3 L33: 0.0572 L12: 0.0236 REMARK 3 L13: -0.0172 L23: 0.0114 REMARK 3 S TENSOR REMARK 3 S11: -0.0068 S12: -0.0134 S13: 0.0216 REMARK 3 S21: 0.0041 S22: 0.0110 S23: 0.0355 REMARK 3 S31: -0.0144 S32: -0.0517 S33: -0.0101 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 58 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1685 -9.9843 32.2646 REMARK 3 T TENSOR REMARK 3 T11: -0.0564 T22: -0.0279 REMARK 3 T33: 0.0030 T12: 0.0082 REMARK 3 T13: 0.0156 T23: 0.0296 REMARK 3 L TENSOR REMARK 3 L11: 0.3605 L22: 0.2039 REMARK 3 L33: 0.2943 L12: 0.1284 REMARK 3 L13: 0.0253 L23: -0.0877 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: 0.0437 S13: -0.0094 REMARK 3 S21: -0.0450 S22: -0.0011 S23: -0.0473 REMARK 3 S31: 0.0271 S32: 0.0609 S33: -0.0478 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 82 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6196 -9.8868 42.8958 REMARK 3 T TENSOR REMARK 3 T11: 0.0465 T22: 0.0989 REMARK 3 T33: 0.0996 T12: -0.0053 REMARK 3 T13: -0.0138 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 0.0184 L22: 0.0075 REMARK 3 L33: 0.0280 L12: -0.0093 REMARK 3 L13: -0.0067 L23: -0.0056 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.0523 S13: -0.0596 REMARK 3 S21: -0.0345 S22: -0.0148 S23: 0.1029 REMARK 3 S31: -0.0106 S32: -0.0755 S33: -0.0000 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 109 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5039 -5.8750 48.9469 REMARK 3 T TENSOR REMARK 3 T11: -0.0259 T22: 0.0404 REMARK 3 T33: 0.0395 T12: 0.0295 REMARK 3 T13: 0.0048 T23: 0.0171 REMARK 3 L TENSOR REMARK 3 L11: 0.5395 L22: 0.4334 REMARK 3 L33: 0.5191 L12: 0.2234 REMARK 3 L13: 0.5231 L23: 0.1526 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: -0.1219 S13: 0.0391 REMARK 3 S21: 0.0565 S22: -0.0028 S23: 0.1073 REMARK 3 S31: -0.0261 S32: -0.1270 S33: -0.2224 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 110 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.0494 -13.1381 54.2393 REMARK 3 T TENSOR REMARK 3 T11: -0.0104 T22: 0.0926 REMARK 3 T33: 0.0644 T12: -0.0464 REMARK 3 T13: 0.0657 T23: 0.0957 REMARK 3 L TENSOR REMARK 3 L11: 0.3329 L22: 0.7241 REMARK 3 L33: 0.2849 L12: 0.1459 REMARK 3 L13: 0.0963 L23: 0.2851 REMARK 3 S TENSOR REMARK 3 S11: 0.0559 S12: -0.1409 S13: 0.0414 REMARK 3 S21: 0.1340 S22: -0.0634 S23: 0.1717 REMARK 3 S31: 0.0199 S32: -0.1037 S33: -0.0181 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 139 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4002 -2.8975 52.8820 REMARK 3 T TENSOR REMARK 3 T11: 0.0232 T22: 0.0931 REMARK 3 T33: 0.1196 T12: 0.0142 REMARK 3 T13: 0.0329 T23: 0.0195 REMARK 3 L TENSOR REMARK 3 L11: 1.4615 L22: 0.1000 REMARK 3 L33: 1.0549 L12: 0.1609 REMARK 3 L13: 0.1545 L23: -0.0286 REMARK 3 S TENSOR REMARK 3 S11: 0.0091 S12: -0.1556 S13: 0.3031 REMARK 3 S21: 0.0754 S22: -0.0156 S23: 0.0824 REMARK 3 S31: -0.1348 S32: -0.0365 S33: -0.1827 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1564 -5.6675 60.7024 REMARK 3 T TENSOR REMARK 3 T11: 0.0822 T22: 0.2358 REMARK 3 T33: 0.0625 T12: 0.0355 REMARK 3 T13: 0.0001 T23: 0.0708 REMARK 3 L TENSOR REMARK 3 L11: 0.6252 L22: 0.9823 REMARK 3 L33: 0.0842 L12: 0.3786 REMARK 3 L13: -0.1002 L23: -0.1011 REMARK 3 S TENSOR REMARK 3 S11: 0.0588 S12: -0.3056 S13: 0.0300 REMARK 3 S21: 0.3083 S22: 0.0500 S23: 0.1206 REMARK 3 S31: -0.0533 S32: -0.1617 S33: 0.0450 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 178 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3952 13.8025 52.8622 REMARK 3 T TENSOR REMARK 3 T11: 0.4128 T22: 0.2824 REMARK 3 T33: 0.2082 T12: 0.0480 REMARK 3 T13: -0.0322 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 0.0021 L22: 0.0071 REMARK 3 L33: 0.0100 L12: -0.0051 REMARK 3 L13: 0.0054 L23: -0.0093 REMARK 3 S TENSOR REMARK 3 S11: 0.0600 S12: -0.1233 S13: 0.1791 REMARK 3 S21: 0.0410 S22: -0.0153 S23: -0.0094 REMARK 3 S31: -0.1048 S32: 0.0494 S33: 0.0000 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 193 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.2037 0.3923 57.5297 REMARK 3 T TENSOR REMARK 3 T11: 0.1169 T22: 0.1681 REMARK 3 T33: -0.0069 T12: -0.0112 REMARK 3 T13: -0.0292 T23: 0.0134 REMARK 3 L TENSOR REMARK 3 L11: 0.4378 L22: 0.4325 REMARK 3 L33: 0.3989 L12: -0.1142 REMARK 3 L13: 0.1546 L23: -0.3119 REMARK 3 S TENSOR REMARK 3 S11: -0.0131 S12: -0.2981 S13: 0.0251 REMARK 3 S21: 0.2677 S22: -0.0774 S23: -0.0472 REMARK 3 S31: -0.2656 S32: 0.0796 S33: -0.0324 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 217 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.5141 19.3527 39.4425 REMARK 3 T TENSOR REMARK 3 T11: 0.1876 T22: 0.0493 REMARK 3 T33: 0.1202 T12: -0.0457 REMARK 3 T13: -0.0723 T23: -0.0769 REMARK 3 L TENSOR REMARK 3 L11: 0.2014 L22: 0.1335 REMARK 3 L33: 0.2059 L12: -0.0452 REMARK 3 L13: 0.0757 L23: -0.1649 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: -0.1033 S13: 0.1242 REMARK 3 S21: 0.1172 S22: -0.0272 S23: 0.0446 REMARK 3 S31: -0.1370 S32: -0.0031 S33: 0.0647 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6757 6.2225 53.6355 REMARK 3 T TENSOR REMARK 3 T11: 0.0901 T22: 0.2190 REMARK 3 T33: 0.1043 T12: -0.0416 REMARK 3 T13: -0.0493 T23: -0.0157 REMARK 3 L TENSOR REMARK 3 L11: 0.0403 L22: 0.1018 REMARK 3 L33: 0.0147 L12: 0.0311 REMARK 3 L13: -0.0086 L23: 0.0248 REMARK 3 S TENSOR REMARK 3 S11: -0.0195 S12: -0.0439 S13: 0.0503 REMARK 3 S21: 0.0645 S22: -0.0155 S23: -0.0673 REMARK 3 S31: -0.0569 S32: 0.0558 S33: 0.0533 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 248 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.3370 7.7153 32.3682 REMARK 3 T TENSOR REMARK 3 T11: 0.0204 T22: -0.0554 REMARK 3 T33: 0.0582 T12: -0.0486 REMARK 3 T13: -0.0295 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.1374 L22: 0.2070 REMARK 3 L33: 0.1542 L12: 0.1313 REMARK 3 L13: -0.0025 L23: 0.1134 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: -0.0645 S13: 0.0362 REMARK 3 S21: -0.0891 S22: 0.0052 S23: -0.0463 REMARK 3 S31: -0.1089 S32: 0.0878 S33: 0.0159 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000226487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-MAR-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X8C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0809 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50194 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 39.488 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 16.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3C4U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, PEG 1000, CALCIUM ACETATE, REMARK 280 TRIS-ACETIC ACID BUFFER, PH 8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.02300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -130.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 140 REMARK 465 ILE A 141 REMARK 465 GLU A 142 REMARK 465 ASP A 143 REMARK 465 ASN A 144 REMARK 465 ILE A 145 REMARK 465 SER A 146 REMARK 465 VAL A 147 REMARK 465 ASP A 148 REMARK 465 GLU A 149 REMARK 465 LYS A 150 REMARK 465 ASP A 151 REMARK 465 ALA A 152 REMARK 465 GLY B 140 REMARK 465 ILE B 141 REMARK 465 GLU B 142 REMARK 465 ASP B 143 REMARK 465 ASN B 144 REMARK 465 ILE B 145 REMARK 465 SER B 146 REMARK 465 VAL B 147 REMARK 465 ASP B 148 REMARK 465 GLU B 149 REMARK 465 LYS B 150 REMARK 465 ASP B 151 REMARK 465 ALA B 152 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN B 242 O HOH B 501 1.46 REMARK 500 HE22 GLN A 242 O HOH A 506 1.58 REMARK 500 O HOH B 887 O HOH B 894 1.95 REMARK 500 O HOH B 581 O HOH B 820 1.97 REMARK 500 O HOH B 519 O HOH B 584 2.04 REMARK 500 O HOH A 690 O HOH A 704 2.07 REMARK 500 OE2 GLU A 91 O HOH A 501 2.08 REMARK 500 O HOH B 699 O HOH B 862 2.10 REMARK 500 O HOH A 769 O HOH A 814 2.10 REMARK 500 O HOH B 837 O HOH B 879 2.10 REMARK 500 O HOH B 745 O HOH B 836 2.12 REMARK 500 O HOH B 887 O HOH B 916 2.13 REMARK 500 O HOH A 551 O HOH A 734 2.13 REMARK 500 O HOH B 547 O HOH B 660 2.15 REMARK 500 O HOH A 542 O HOH A 648 2.16 REMARK 500 O HOH B 601 O HOH B 866 2.16 REMARK 500 NE2 GLN B 242 O HOH B 501 2.17 REMARK 500 O HOH B 600 O HOH B 652 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 654 O HOH B 767 1655 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 215 71.05 44.99 REMARK 500 ASP A 255 -54.33 -140.66 REMARK 500 ILE B 215 70.97 44.47 REMARK 500 ASP B 255 -56.63 -138.36 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 918 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 919 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH B 920 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH B 921 DISTANCE = 6.72 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 82 OD1 REMARK 620 2 GLU A 132 OE2 139.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 83 NE2 REMARK 620 2 HIS A 180 NE2 112.0 REMARK 620 3 HIS A 210 ND1 101.5 146.4 REMARK 620 4 HOH A 512 O 90.5 89.5 90.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 104 OD1 REMARK 620 2 ASP A 104 OD2 55.2 REMARK 620 3 SER A 106 OG 79.2 134.1 REMARK 620 4 GLU A 134 OE1 84.2 94.0 85.5 REMARK 620 5 HOH A 714 O 135.1 80.3 145.6 93.8 REMARK 620 6 HOH A 717 O 152.0 152.7 72.9 91.2 72.7 REMARK 620 7 HOH A 759 O 85.0 82.7 89.0 168.6 96.3 96.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 402 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 82 OD1 REMARK 620 2 GLU B 132 OE2 139.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 83 NE2 REMARK 620 2 HIS B 180 NE2 114.7 REMARK 620 3 HIS B 210 ND1 102.7 142.6 REMARK 620 4 HOH B 545 O 92.3 86.1 91.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 104 OD1 REMARK 620 2 ASP B 104 OD2 54.7 REMARK 620 3 SER B 106 OG 130.4 77.0 REMARK 620 4 GLU B 134 OE1 96.6 83.0 87.1 REMARK 620 5 HOH B 689 O 153.6 151.4 75.7 87.4 REMARK 620 6 HOH B 728 O 80.8 134.5 148.5 94.4 72.9 REMARK 620 7 HOH B 742 O 81.7 87.0 85.6 168.8 99.1 96.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 13P A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 13P B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VJE RELATED DB: PDB REMARK 900 RELATED ID: 5VJD RELATED DB: PDB DBREF 5VJF A 1 307 UNP P56109 ALF_HELPY 1 307 DBREF 5VJF B 1 307 UNP P56109 ALF_HELPY 1 307 SEQADV 5VJF ALA A 48 UNP P56109 THR 48 ENGINEERED MUTATION SEQADV 5VJF ILE A 67 UNP P56109 THR 67 ENGINEERED MUTATION SEQADV 5VJF ALA B 48 UNP P56109 THR 48 ENGINEERED MUTATION SEQADV 5VJF ILE B 67 UNP P56109 THR 67 ENGINEERED MUTATION SEQRES 1 A 307 MET LEU VAL LYS GLY ASN GLU ILE LEU LEU LYS ALA HIS SEQRES 2 A 307 LYS GLU GLY TYR GLY VAL GLY ALA PHE ASN PHE VAL ASN SEQRES 3 A 307 PHE GLU MET LEU ASN ALA ILE PHE GLU ALA GLY ASN GLU SEQRES 4 A 307 GLU ASN SER PRO LEU PHE ILE GLN ALA SER GLU GLY ALA SEQRES 5 A 307 ILE LYS TYR MET GLY ILE ASP MET ALA VAL GLY MET VAL SEQRES 6 A 307 LYS ILE MET CYS GLU ARG TYR PRO HIS ILE PRO VAL ALA SEQRES 7 A 307 LEU HIS LEU ASP HIS GLY THR THR PHE GLU SER CYS GLU SEQRES 8 A 307 LYS ALA VAL LYS ALA GLY PHE THR SER VAL MET ILE ASP SEQRES 9 A 307 ALA SER HIS HIS ALA PHE GLU GLU ASN LEU GLU LEU THR SEQRES 10 A 307 SER LYS VAL VAL LYS MET ALA HIS ASN ALA GLY VAL SER SEQRES 11 A 307 VAL GLU ALA GLU LEU GLY ARG LEU MET GLY ILE GLU ASP SEQRES 12 A 307 ASN ILE SER VAL ASP GLU LYS ASP ALA VAL LEU VAL ASN SEQRES 13 A 307 PRO LYS GLU ALA GLU GLN PHE VAL LYS GLU SER GLN VAL SEQRES 14 A 307 ASP TYR LEU ALA PRO ALA ILE GLY THR SER HIS GLY ALA SEQRES 15 A 307 PHE LYS PHE LYS GLY GLU PRO LYS LEU ASP PHE GLU ARG SEQRES 16 A 307 LEU GLN GLU VAL LYS ARG LEU THR ASN ILE PRO LEU VAL SEQRES 17 A 307 LEU HIS GLY ALA SER ALA ILE PRO ASP ASN VAL ARG LYS SEQRES 18 A 307 SER TYR LEU ASP ALA GLY GLY ASP LEU LYS GLY SER LYS SEQRES 19 A 307 GLY VAL PRO PHE GLU PHE LEU GLN GLU SER VAL LYS GLY SEQRES 20 A 307 GLY ILE ASN LYS VAL ASN THR ASP THR ASP LEU ARG ILE SEQRES 21 A 307 ALA PHE ILE ALA GLU VAL ARG LYS VAL ALA ASN GLU ASP SEQRES 22 A 307 LYS SER GLN PHE ASP LEU ARG LYS PHE PHE SER PRO ALA SEQRES 23 A 307 GLN LEU ALA LEU LYS ASN VAL VAL LYS GLU ARG MET LYS SEQRES 24 A 307 LEU LEU GLY SER ALA ASN LYS ILE SEQRES 1 B 307 MET LEU VAL LYS GLY ASN GLU ILE LEU LEU LYS ALA HIS SEQRES 2 B 307 LYS GLU GLY TYR GLY VAL GLY ALA PHE ASN PHE VAL ASN SEQRES 3 B 307 PHE GLU MET LEU ASN ALA ILE PHE GLU ALA GLY ASN GLU SEQRES 4 B 307 GLU ASN SER PRO LEU PHE ILE GLN ALA SER GLU GLY ALA SEQRES 5 B 307 ILE LYS TYR MET GLY ILE ASP MET ALA VAL GLY MET VAL SEQRES 6 B 307 LYS ILE MET CYS GLU ARG TYR PRO HIS ILE PRO VAL ALA SEQRES 7 B 307 LEU HIS LEU ASP HIS GLY THR THR PHE GLU SER CYS GLU SEQRES 8 B 307 LYS ALA VAL LYS ALA GLY PHE THR SER VAL MET ILE ASP SEQRES 9 B 307 ALA SER HIS HIS ALA PHE GLU GLU ASN LEU GLU LEU THR SEQRES 10 B 307 SER LYS VAL VAL LYS MET ALA HIS ASN ALA GLY VAL SER SEQRES 11 B 307 VAL GLU ALA GLU LEU GLY ARG LEU MET GLY ILE GLU ASP SEQRES 12 B 307 ASN ILE SER VAL ASP GLU LYS ASP ALA VAL LEU VAL ASN SEQRES 13 B 307 PRO LYS GLU ALA GLU GLN PHE VAL LYS GLU SER GLN VAL SEQRES 14 B 307 ASP TYR LEU ALA PRO ALA ILE GLY THR SER HIS GLY ALA SEQRES 15 B 307 PHE LYS PHE LYS GLY GLU PRO LYS LEU ASP PHE GLU ARG SEQRES 16 B 307 LEU GLN GLU VAL LYS ARG LEU THR ASN ILE PRO LEU VAL SEQRES 17 B 307 LEU HIS GLY ALA SER ALA ILE PRO ASP ASN VAL ARG LYS SEQRES 18 B 307 SER TYR LEU ASP ALA GLY GLY ASP LEU LYS GLY SER LYS SEQRES 19 B 307 GLY VAL PRO PHE GLU PHE LEU GLN GLU SER VAL LYS GLY SEQRES 20 B 307 GLY ILE ASN LYS VAL ASN THR ASP THR ASP LEU ARG ILE SEQRES 21 B 307 ALA PHE ILE ALA GLU VAL ARG LYS VAL ALA ASN GLU ASP SEQRES 22 B 307 LYS SER GLN PHE ASP LEU ARG LYS PHE PHE SER PRO ALA SEQRES 23 B 307 GLN LEU ALA LEU LYS ASN VAL VAL LYS GLU ARG MET LYS SEQRES 24 B 307 LEU LEU GLY SER ALA ASN LYS ILE HET ZN A 401 1 HET NA A 402 1 HET CA A 403 1 HET GOL A 404 14 HET 13P A 405 10 HET ZN B 401 1 HET NA B 402 1 HET CA B 403 1 HET 13P B 404 10 HETNAM ZN ZINC ION HETNAM NA SODIUM ION HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM 13P 1,3-DIHYDROXYACETONEPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 NA 2(NA 1+) FORMUL 5 CA 2(CA 2+) FORMUL 6 GOL C3 H8 O3 FORMUL 7 13P 2(C3 H7 O6 P) FORMUL 12 HOH *840(H2 O) HELIX 1 AA1 LYS A 4 GLY A 16 1 13 HELIX 2 AA2 ASN A 26 ASN A 41 1 16 HELIX 3 AA3 GLU A 50 GLY A 57 1 8 HELIX 4 AA4 GLY A 57 TYR A 72 1 16 HELIX 5 AA5 THR A 86 GLY A 97 1 12 HELIX 6 AA6 ALA A 109 ALA A 127 1 19 HELIX 7 AA7 ASN A 156 GLN A 168 1 13 HELIX 8 AA8 ASP A 192 ASN A 204 1 13 HELIX 9 AA9 PRO A 216 ALA A 226 1 11 HELIX 10 AB1 PRO A 237 GLY A 248 1 12 HELIX 11 AB2 ASP A 255 ASP A 273 1 19 HELIX 12 AB3 ASP A 278 LEU A 301 1 24 HELIX 13 AB4 LYS B 4 GLY B 16 1 13 HELIX 14 AB5 ASN B 26 ASN B 41 1 16 HELIX 15 AB6 GLU B 50 GLY B 57 1 8 HELIX 16 AB7 GLY B 57 TYR B 72 1 16 HELIX 17 AB8 THR B 86 GLY B 97 1 12 HELIX 18 AB9 ALA B 109 ALA B 127 1 19 HELIX 19 AC1 ASN B 156 GLN B 168 1 13 HELIX 20 AC2 ASP B 192 ASN B 204 1 13 HELIX 21 AC3 PRO B 216 ALA B 226 1 11 HELIX 22 AC4 PRO B 237 GLY B 248 1 12 HELIX 23 AC5 ASP B 255 ASP B 273 1 19 HELIX 24 AC6 ASP B 278 LEU B 301 1 24 SHEET 1 AA1 9 VAL A 19 ASN A 23 0 SHEET 2 AA1 9 LEU A 44 SER A 49 1 O GLN A 47 N PHE A 22 SHEET 3 AA1 9 VAL A 77 GLY A 84 1 O ALA A 78 N ILE A 46 SHEET 4 AA1 9 SER A 100 ILE A 103 1 O MET A 102 N LEU A 81 SHEET 5 AA1 9 SER A 130 LEU A 135 1 O GLU A 132 N ILE A 103 SHEET 6 AA1 9 TYR A 171 PRO A 174 1 O ALA A 173 N ALA A 133 SHEET 7 AA1 9 LEU A 207 LEU A 209 1 O VAL A 208 N LEU A 172 SHEET 8 AA1 9 ILE A 249 THR A 254 1 O ASN A 250 N LEU A 207 SHEET 9 AA1 9 VAL A 19 ASN A 23 1 N ALA A 21 O THR A 254 SHEET 1 AA2 9 VAL B 19 ASN B 23 0 SHEET 2 AA2 9 LEU B 44 SER B 49 1 O PHE B 45 N PHE B 22 SHEET 3 AA2 9 VAL B 77 GLY B 84 1 O ALA B 78 N ILE B 46 SHEET 4 AA2 9 SER B 100 ILE B 103 1 O MET B 102 N LEU B 81 SHEET 5 AA2 9 SER B 130 LEU B 135 1 O GLU B 132 N ILE B 103 SHEET 6 AA2 9 TYR B 171 PRO B 174 1 O ALA B 173 N ALA B 133 SHEET 7 AA2 9 LEU B 207 LEU B 209 1 O VAL B 208 N LEU B 172 SHEET 8 AA2 9 ILE B 249 THR B 254 1 O LYS B 251 N LEU B 209 SHEET 9 AA2 9 VAL B 19 ASN B 23 1 N ALA B 21 O THR B 254 LINK OD1 ASP A 82 NA NA A 402 1555 1555 2.79 LINK NE2 HIS A 83 ZN ZN A 401 1555 1555 1.97 LINK OD1 ASP A 104 CA CA A 403 1555 1555 2.41 LINK OD2 ASP A 104 CA CA A 403 1555 1555 2.32 LINK OG SER A 106 CA CA A 403 1555 1555 2.52 LINK OE2 GLU A 132 NA NA A 402 1555 1555 2.78 LINK OE1 GLU A 134 CA CA A 403 1555 1555 2.30 LINK NE2 HIS A 180 ZN ZN A 401 1555 1555 1.95 LINK ND1 HIS A 210 ZN ZN A 401 1555 1555 1.99 LINK ZN ZN A 401 O HOH A 512 1555 1555 2.69 LINK CA CA A 403 O HOH A 714 1555 1555 2.27 LINK CA CA A 403 O HOH A 717 1555 1555 2.45 LINK CA CA A 403 O HOH A 759 1555 1555 2.48 LINK OD1 ASP B 82 NA NA B 402 1555 1555 2.84 LINK NE2 HIS B 83 ZN ZN B 401 1555 1555 1.99 LINK OD1 ASP B 104 CA CA B 403 1555 1555 2.29 LINK OD2 ASP B 104 CA CA B 403 1555 1555 2.45 LINK OG SER B 106 CA CA B 403 1555 1555 2.37 LINK OE2 GLU B 132 NA NA B 402 1555 1555 2.80 LINK OE1 GLU B 134 CA CA B 403 1555 1555 2.28 LINK NE2 HIS B 180 ZN ZN B 401 1555 1555 1.97 LINK ND1 HIS B 210 ZN ZN B 401 1555 1555 2.01 LINK ZN ZN B 401 O HOH B 545 1555 1555 2.64 LINK CA CA B 403 O HOH B 689 1555 1555 2.41 LINK CA CA B 403 O HOH B 728 1555 1555 2.41 LINK CA CA B 403 O HOH B 742 1555 1555 2.44 SITE 1 AC1 5 HIS A 83 HIS A 180 HIS A 210 13P A 405 SITE 2 AC1 5 HOH A 512 SITE 1 AC2 7 HIS A 80 ASP A 82 MET A 102 GLU A 132 SITE 2 AC2 7 HIS A 210 LYS A 251 ASN A 253 SITE 1 AC3 6 ASP A 104 SER A 106 GLU A 134 HOH A 714 SITE 2 AC3 6 HOH A 717 HOH A 759 SITE 1 AC4 2 HOH A 532 HOH A 664 SITE 1 AC5 16 ASN A 23 GLN A 47 ASP A 82 HIS A 83 SITE 2 AC5 16 HIS A 180 GLY A 181 LYS A 184 HIS A 210 SITE 3 AC5 16 GLY A 211 ALA A 212 SER A 213 ASN A 253 SITE 4 AC5 16 ASP A 255 THR A 256 ZN A 401 HOH A 639 SITE 1 AC6 5 HIS B 83 HIS B 180 HIS B 210 13P B 404 SITE 2 AC6 5 HOH B 545 SITE 1 AC7 7 HIS B 80 ASP B 82 MET B 102 GLU B 132 SITE 2 AC7 7 HIS B 210 LYS B 251 ASN B 253 SITE 1 AC8 6 ASP B 104 SER B 106 GLU B 134 HOH B 689 SITE 2 AC8 6 HOH B 728 HOH B 742 SITE 1 AC9 14 ASP B 82 HIS B 83 HIS B 180 GLY B 181 SITE 2 AC9 14 LYS B 184 HIS B 210 GLY B 211 ALA B 212 SITE 3 AC9 14 SER B 213 ASN B 253 ASP B 255 THR B 256 SITE 4 AC9 14 ZN B 401 HOH B 616 CRYST1 39.518 88.046 90.811 90.00 100.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025305 0.000000 0.004640 0.00000 SCALE2 0.000000 0.011358 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011195 0.00000