data_5VJT # _entry.id 5VJT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.360 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VJT pdb_00005vjt 10.2210/pdb5vjt/pdb WWPDB D_1000227494 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5VJU PDB . unspecified 5VJS PDB . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VJT _pdbx_database_status.recvd_initial_deposition_date 2017-04-19 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ennist, N.M.' 1 0000-0002-4823-9497 'Stayrook, S.E.' 2 ? 'Dutton, P.L.' 3 ? 'Moser, C.C.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 4937 _citation.page_last 4937 _citation.title 'De novo protein design of photochemical reaction centers.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-32710-5 _citation.pdbx_database_id_PubMed 35999239 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ennist, N.M.' 1 0000-0002-4823-9497 primary 'Zhao, Z.' 2 ? primary 'Stayrook, S.E.' 3 0000-0002-1677-8293 primary 'Discher, B.M.' 4 ? primary 'Dutton, P.L.' 5 ? primary 'Moser, C.C.' 6 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5VJT _cell.details ? _cell.formula_units_Z ? _cell.length_a 43.747 _cell.length_a_esd ? _cell.length_b 43.747 _cell.length_b_esd ? _cell.length_c 245.522 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Reaction Center Maquette' 22530.430 1 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 non-polymer syn 'PROTOPORPHYRIN IX CONTAINING FE' 616.487 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 5 water nat water 18.015 172 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSPELRQEHQQLAQEFQQLLQEIQQLGRELLKGELQGIKQLREASEKARNPEKKSVLQKILEDEEKHIELLETLQQTGQE AQQLLQELQQTGQELWQLGGSGGPELRQKHQQLAQKIQQLLQKHQQLGAKILEDEEKHIELLETILGGSGGDELRELLKG ELQGIKQYRELQQLGQKAQQLVQKLQQTGQKLWQLG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSPELRQEHQQLAQEFQQLLQEIQQLGRELLKGELQGIKQLREASEKARNPEKKSVLQKILEDEEKHIELLETLQQTGQE AQQLLQELQQTGQELWQLGGSGGPELRQKHQQLAQKIQQLLQKHQQLGAKILEDEEKHIELLETILGGSGGDELRELLKG ELQGIKQYRELQQLGQKAQQLVQKLQQTGQKLWQLG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 GLU n 1 5 LEU n 1 6 ARG n 1 7 GLN n 1 8 GLU n 1 9 HIS n 1 10 GLN n 1 11 GLN n 1 12 LEU n 1 13 ALA n 1 14 GLN n 1 15 GLU n 1 16 PHE n 1 17 GLN n 1 18 GLN n 1 19 LEU n 1 20 LEU n 1 21 GLN n 1 22 GLU n 1 23 ILE n 1 24 GLN n 1 25 GLN n 1 26 LEU n 1 27 GLY n 1 28 ARG n 1 29 GLU n 1 30 LEU n 1 31 LEU n 1 32 LYS n 1 33 GLY n 1 34 GLU n 1 35 LEU n 1 36 GLN n 1 37 GLY n 1 38 ILE n 1 39 LYS n 1 40 GLN n 1 41 LEU n 1 42 ARG n 1 43 GLU n 1 44 ALA n 1 45 SER n 1 46 GLU n 1 47 LYS n 1 48 ALA n 1 49 ARG n 1 50 ASN n 1 51 PRO n 1 52 GLU n 1 53 LYS n 1 54 LYS n 1 55 SER n 1 56 VAL n 1 57 LEU n 1 58 GLN n 1 59 LYS n 1 60 ILE n 1 61 LEU n 1 62 GLU n 1 63 ASP n 1 64 GLU n 1 65 GLU n 1 66 LYS n 1 67 HIS n 1 68 ILE n 1 69 GLU n 1 70 LEU n 1 71 LEU n 1 72 GLU n 1 73 THR n 1 74 LEU n 1 75 GLN n 1 76 GLN n 1 77 THR n 1 78 GLY n 1 79 GLN n 1 80 GLU n 1 81 ALA n 1 82 GLN n 1 83 GLN n 1 84 LEU n 1 85 LEU n 1 86 GLN n 1 87 GLU n 1 88 LEU n 1 89 GLN n 1 90 GLN n 1 91 THR n 1 92 GLY n 1 93 GLN n 1 94 GLU n 1 95 LEU n 1 96 TRP n 1 97 GLN n 1 98 LEU n 1 99 GLY n 1 100 GLY n 1 101 SER n 1 102 GLY n 1 103 GLY n 1 104 PRO n 1 105 GLU n 1 106 LEU n 1 107 ARG n 1 108 GLN n 1 109 LYS n 1 110 HIS n 1 111 GLN n 1 112 GLN n 1 113 LEU n 1 114 ALA n 1 115 GLN n 1 116 LYS n 1 117 ILE n 1 118 GLN n 1 119 GLN n 1 120 LEU n 1 121 LEU n 1 122 GLN n 1 123 LYS n 1 124 HIS n 1 125 GLN n 1 126 GLN n 1 127 LEU n 1 128 GLY n 1 129 ALA n 1 130 LYS n 1 131 ILE n 1 132 LEU n 1 133 GLU n 1 134 ASP n 1 135 GLU n 1 136 GLU n 1 137 LYS n 1 138 HIS n 1 139 ILE n 1 140 GLU n 1 141 LEU n 1 142 LEU n 1 143 GLU n 1 144 THR n 1 145 ILE n 1 146 LEU n 1 147 GLY n 1 148 GLY n 1 149 SER n 1 150 GLY n 1 151 GLY n 1 152 ASP n 1 153 GLU n 1 154 LEU n 1 155 ARG n 1 156 GLU n 1 157 LEU n 1 158 LEU n 1 159 LYS n 1 160 GLY n 1 161 GLU n 1 162 LEU n 1 163 GLN n 1 164 GLY n 1 165 ILE n 1 166 LYS n 1 167 GLN n 1 168 TYR n 1 169 ARG n 1 170 GLU n 1 171 LEU n 1 172 GLN n 1 173 GLN n 1 174 LEU n 1 175 GLY n 1 176 GLN n 1 177 LYS n 1 178 ALA n 1 179 GLN n 1 180 GLN n 1 181 LEU n 1 182 VAL n 1 183 GLN n 1 184 LYS n 1 185 LEU n 1 186 GLN n 1 187 GLN n 1 188 THR n 1 189 GLY n 1 190 GLN n 1 191 LYS n 1 192 LEU n 1 193 TRP n 1 194 GLN n 1 195 LEU n 1 196 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 196 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene designed _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'de novo designed protein' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'synthetic construct' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 32630 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pJ414 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5VJT _struct_ref.pdbx_db_accession 5VJT _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5VJT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5VJT _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 196 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HEM non-polymer . 'PROTOPORPHYRIN IX CONTAINING FE' HEME 'C34 H32 Fe N4 O4' 616.487 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VJT _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 52.82 _exptl_crystal.description octahedron _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.7 M NaCl, 100 mM Na acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Oxford Danfysik toroidal focusing mirror' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-11-20 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'channel cut monochromator' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0781 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X6A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0781 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X6A _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate 23.325 _reflns.entry_id 5VJT _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.450 _reflns.d_resolution_low 41.210 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 43568 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 99.700 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.779 _reflns.pdbx_Rmerge_I_obs 0.099 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.300 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.953 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.105 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.450 1.490 ? 1.260 ? ? ? ? 3025 96.100 ? ? ? ? 1.337 ? ? ? ? ? ? ? ? 5.225 ? ? ? ? 1.484 ? ? 1 1 0.684 ? 1.490 1.530 ? 2.170 ? ? ? ? 3083 99.800 ? ? ? ? 1.125 ? ? ? ? ? ? ? ? 7.994 ? ? ? ? 1.202 ? ? 2 1 0.923 ? 1.530 1.580 ? 1.920 ? ? ? ? 3005 100.000 ? ? ? ? 1.354 ? ? ? ? ? ? ? ? 8.965 ? ? ? ? 1.436 ? ? 3 1 0.776 ? 1.580 1.620 ? 2.350 ? ? ? ? 2929 100.000 ? ? ? ? 1.132 ? ? ? ? ? ? ? ? 9.023 ? ? ? ? 1.199 ? ? 4 1 0.801 ? 1.620 1.680 ? 2.870 ? ? ? ? 2824 100.000 ? ? ? ? 0.930 ? ? ? ? ? ? ? ? 9.161 ? ? ? ? 0.984 ? ? 5 1 0.857 ? 1.680 1.740 ? 3.230 ? ? ? ? 2711 100.000 ? ? ? ? 0.814 ? ? ? ? ? ? ? ? 9.221 ? ? ? ? 0.862 ? ? 6 1 0.902 ? 1.740 1.800 ? 4.390 ? ? ? ? 2651 100.000 ? ? ? ? 0.592 ? ? ? ? ? ? ? ? 9.308 ? ? ? ? 0.626 ? ? 7 1 0.940 ? 1.800 1.870 ? 5.440 ? ? ? ? 2579 100.000 ? ? ? ? 0.475 ? ? ? ? ? ? ? ? 9.336 ? ? ? ? 0.503 ? ? 8 1 0.957 ? 1.870 1.960 ? 7.080 ? ? ? ? 2461 100.000 ? ? ? ? 0.358 ? ? ? ? ? ? ? ? 9.333 ? ? ? ? 0.379 ? ? 9 1 0.982 ? 1.960 2.050 ? 10.380 ? ? ? ? 2351 100.000 ? ? ? ? 0.236 ? ? ? ? ? ? ? ? 9.272 ? ? ? ? 0.249 ? ? 10 1 0.985 ? 2.050 2.160 ? 14.950 ? ? ? ? 2262 100.000 ? ? ? ? 0.158 ? ? ? ? ? ? ? ? 9.376 ? ? ? ? 0.167 ? ? 11 1 0.992 ? 2.160 2.300 ? 18.590 ? ? ? ? 2162 100.000 ? ? ? ? 0.123 ? ? ? ? ? ? ? ? 9.336 ? ? ? ? 0.130 ? ? 12 1 0.995 ? 2.300 2.450 ? 22.930 ? ? ? ? 2010 100.000 ? ? ? ? 0.095 ? ? ? ? ? ? ? ? 9.285 ? ? ? ? 0.101 ? ? 13 1 0.997 ? 2.450 2.650 ? 30.170 ? ? ? ? 1882 100.000 ? ? ? ? 0.071 ? ? ? ? ? ? ? ? 9.300 ? ? ? ? 0.075 ? ? 14 1 0.998 ? 2.650 2.900 ? 33.420 ? ? ? ? 1767 100.000 ? ? ? ? 0.061 ? ? ? ? ? ? ? ? 9.176 ? ? ? ? 0.065 ? ? 15 1 0.999 ? 2.900 3.250 ? 42.830 ? ? ? ? 1596 99.900 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 9.132 ? ? ? ? 0.048 ? ? 16 1 0.999 ? 3.250 3.750 ? 56.550 ? ? ? ? 1430 99.900 ? ? ? ? 0.032 ? ? ? ? ? ? ? ? 8.889 ? ? ? ? 0.034 ? ? 17 1 0.999 ? 3.750 4.590 ? 63.960 ? ? ? ? 1238 99.900 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 8.623 ? ? ? ? 0.028 ? ? 18 1 1.000 ? 4.590 6.490 ? 58.890 ? ? ? ? 997 99.600 ? ? ? ? 0.028 ? ? ? ? ? ? ? ? 8.362 ? ? ? ? 0.030 ? ? 19 1 1.000 ? 6.490 41.210 ? 59.810 ? ? ? ? 605 98.500 ? ? ? ? 0.026 ? ? ? ? ? ? ? ? 6.929 ? ? ? ? 0.028 ? ? 20 1 1.000 ? # _refine.aniso_B[1][1] 0.0100 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] 0.0100 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.0200 _refine.B_iso_max 71.570 _refine.B_iso_mean 23.2740 _refine.B_iso_min 11.180 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9460 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VJT _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.4500 _refine.ls_d_res_low 41.2100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 41378 _refine.ls_number_reflns_R_free 2193 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.6300 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2034 _refine.ls_R_factor_R_free 0.2356 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2018 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.0700 _refine.pdbx_overall_ESU_R_Free 0.0740 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.1030 _refine.overall_SU_ML 0.0720 _refine.overall_SU_R_Cruickshank_DPI 0.0699 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.4500 _refine_hist.d_res_low 41.2100 _refine_hist.pdbx_number_atoms_ligand 91 _refine_hist.number_atoms_solvent 172 _refine_hist.number_atoms_total 1848 _refine_hist.pdbx_number_residues_total 196 _refine_hist.pdbx_B_iso_mean_ligand 18.34 _refine_hist.pdbx_B_iso_mean_solvent 34.95 _refine_hist.pdbx_number_atoms_protein 1585 _refine_hist.pdbx_number_atoms_nucleic_acid 0 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.031 0.019 1729 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 1699 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 2.236 2.065 2334 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.070 3.000 3909 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 4.288 5.000 201 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 40.215 27.473 91 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.346 15.000 354 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.636 15.000 7 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.156 0.200 239 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.011 0.020 2009 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.009 0.020 390 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.4520 _refine_ls_shell.d_res_low 1.4890 _refine_ls_shell.number_reflns_all 3004 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 156 _refine_ls_shell.number_reflns_R_work 2848 _refine_ls_shell.percent_reflns_obs 95.5200 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3990 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.3730 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5VJT _struct.title 'De Novo Photosynthetic Reaction Center Protein Equipped with Heme B and Zn(II) cations' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VJT _struct_keywords.text 'maquette, protein design, charge separation, artificial photosynthesis, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 1 ? ALA A 48 ? GLY A 1 ALA A 48 1 ? 48 HELX_P HELX_P2 AA2 ASN A 50 ? GLY A 99 ? ASN A 50 GLY A 99 1 ? 50 HELX_P HELX_P3 AA3 PRO A 104 ? ILE A 145 ? PRO A 104 ILE A 145 1 ? 42 HELX_P HELX_P4 AA4 GLY A 151 ? GLY A 196 ? GLY A 151 GLY A 196 1 ? 46 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 9 NE2 ? ? ? 1_555 D HEM . FE A ? A HIS 9 A HEM 203 1_555 ? ? ? ? ? ? ? 1.881 ? ? metalc2 metalc ? ? A HIS 9 NE2 ? ? ? 1_555 D HEM . FE B ? A HIS 9 A HEM 203 1_555 ? ? ? ? ? ? ? 1.874 ? ? metalc3 metalc ? ? A GLU 34 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 34 A ZN 202 1_555 ? ? ? ? ? ? ? 1.929 ? ? metalc4 metalc ? ? A ASP 63 OD2 ? ? ? 1_555 B ZN . ZN ? ? A ASP 63 A ZN 201 1_555 ? ? ? ? ? ? ? 2.031 ? ? metalc5 metalc ? ? A GLU 64 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 64 A ZN 202 1_555 ? ? ? ? ? ? ? 1.988 ? ? metalc6 metalc ? ? A HIS 67 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 67 A ZN 202 1_555 ? ? ? ? ? ? ? 1.927 ? ? metalc7 metalc ? ? A HIS 110 NE2 ? ? ? 1_555 D HEM . FE A ? A HIS 110 A HEM 203 1_555 ? ? ? ? ? ? ? 1.856 ? ? metalc8 metalc ? ? A HIS 110 NE2 ? ? ? 1_555 D HEM . FE B ? A HIS 110 A HEM 203 1_555 ? ? ? ? ? ? ? 1.864 ? ? metalc9 metalc ? ? A ASP 134 OD1 ? ? ? 1_555 B ZN . ZN ? ? A ASP 134 A ZN 201 1_555 ? ? ? ? ? ? ? 1.997 ? ? metalc10 metalc ? ? A GLU 135 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 135 A ZN 202 1_555 ? ? ? ? ? ? ? 1.999 ? ? metalc11 metalc ? ? A HIS 138 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 138 A ZN 201 1_555 ? ? ? ? ? ? ? 1.845 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 201 ? 4 'binding site for residue ZN A 201' AC2 Software A ZN 202 ? 4 'binding site for residue ZN A 202' AC3 Software A HEM 203 ? 18 'binding site for residue HEM A 203' AC4 Software A CL 204 ? 4 'binding site for residue CL A 204' AC5 Software A CL 205 ? 4 'binding site for residue CL A 205' AC6 Software A CL 206 ? 2 'binding site for residue CL A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 63 ? ASP A 63 . ? 1_555 ? 2 AC1 4 ASP A 134 ? ASP A 134 . ? 1_555 ? 3 AC1 4 HIS A 138 ? HIS A 138 . ? 1_555 ? 4 AC1 4 CL F . ? CL A 205 . ? 1_555 ? 5 AC2 4 GLU A 34 ? GLU A 34 . ? 1_555 ? 6 AC2 4 GLU A 64 ? GLU A 64 . ? 1_555 ? 7 AC2 4 HIS A 67 ? HIS A 67 . ? 1_555 ? 8 AC2 4 GLU A 135 ? GLU A 135 . ? 1_555 ? 9 AC3 18 ARG A 6 ? ARG A 6 . ? 1_555 ? 10 AC3 18 HIS A 9 ? HIS A 9 . ? 1_555 ? 11 AC3 18 GLN A 10 ? GLN A 10 . ? 1_555 ? 12 AC3 18 PHE A 16 ? PHE A 16 . ? 1_555 ? 13 AC3 18 LYS A 32 ? LYS A 32 . ? 7_556 ? 14 AC3 18 LEU A 88 ? LEU A 88 . ? 1_555 ? 15 AC3 18 GLY A 92 ? GLY A 92 . ? 1_555 ? 16 AC3 18 TRP A 96 ? TRP A 96 . ? 1_555 ? 17 AC3 18 HIS A 110 ? HIS A 110 . ? 1_555 ? 18 AC3 18 GLN A 111 ? GLN A 111 . ? 1_555 ? 19 AC3 18 ALA A 114 ? ALA A 114 . ? 1_555 ? 20 AC3 18 ILE A 117 ? ILE A 117 . ? 1_555 ? 21 AC3 18 LEU A 185 ? LEU A 185 . ? 1_555 ? 22 AC3 18 GLN A 186 ? GLN A 186 . ? 1_555 ? 23 AC3 18 GLY A 189 ? GLY A 189 . ? 1_555 ? 24 AC3 18 GLN A 190 ? GLN A 190 . ? 1_555 ? 25 AC3 18 TRP A 193 ? TRP A 193 . ? 1_555 ? 26 AC3 18 HOH H . ? HOH A 428 . ? 1_555 ? 27 AC4 4 SER A 45 ? SER A 45 . ? 1_555 ? 28 AC4 4 GLN A 58 ? GLN A 58 . ? 1_555 ? 29 AC4 4 ARG A 169 ? ARG A 169 . ? 6_455 ? 30 AC4 4 HOH H . ? HOH A 414 . ? 1_555 ? 31 AC5 4 ASP A 63 ? ASP A 63 . ? 1_555 ? 32 AC5 4 ASP A 134 ? ASP A 134 . ? 1_555 ? 33 AC5 4 HIS A 138 ? HIS A 138 . ? 1_555 ? 34 AC5 4 ZN B . ? ZN A 201 . ? 1_555 ? 35 AC6 2 ARG A 49 ? ARG A 49 . ? 1_555 ? 36 AC6 2 ASN A 50 ? ASN A 50 . ? 1_555 ? # _atom_sites.entry_id 5VJT _atom_sites.fract_transf_matrix[1][1] 0.022859 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022859 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004073 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL FE N O ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 PRO 3 3 3 PRO PRO A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 HIS 9 9 9 HIS HIS A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 PHE 16 16 16 PHE PHE A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 GLN 18 18 18 GLN GLN A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 GLN 36 36 36 GLN GLN A . n A 1 37 GLY 37 37 37 GLY GLY A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 ARG 49 49 49 ARG ARG A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 HIS 67 67 67 HIS HIS A . n A 1 68 ILE 68 68 68 ILE ILE A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLN 75 75 75 GLN GLN A . n A 1 76 GLN 76 76 76 GLN GLN A . n A 1 77 THR 77 77 77 THR THR A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 LEU 88 88 88 LEU LEU A . n A 1 89 GLN 89 89 89 GLN GLN A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 THR 91 91 91 THR THR A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 GLY 103 103 103 GLY GLY A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 GLU 105 105 105 GLU GLU A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 HIS 110 110 110 HIS HIS A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 GLN 112 112 112 GLN GLN A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 GLN 115 115 115 GLN GLN A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 ILE 117 117 117 ILE ILE A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 GLN 119 119 119 GLN GLN A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLN 122 122 122 GLN GLN A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 LEU 127 127 127 LEU LEU A . n A 1 128 GLY 128 128 128 GLY GLY A . n A 1 129 ALA 129 129 129 ALA ALA A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 GLU 135 135 135 GLU GLU A . n A 1 136 GLU 136 136 136 GLU GLU A . n A 1 137 LYS 137 137 137 LYS LYS A . n A 1 138 HIS 138 138 138 HIS HIS A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 GLU 140 140 140 GLU GLU A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 GLY 151 151 151 GLY GLY A . n A 1 152 ASP 152 152 152 ASP ASP A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 GLU 156 156 156 GLU GLU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 GLY 160 160 160 GLY GLY A . n A 1 161 GLU 161 161 161 GLU GLU A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ILE 165 165 165 ILE ILE A . n A 1 166 LYS 166 166 166 LYS LYS A . n A 1 167 GLN 167 167 167 GLN GLN A . n A 1 168 TYR 168 168 168 TYR TYR A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 GLN 172 172 172 GLN GLN A . n A 1 173 GLN 173 173 173 GLN GLN A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 GLN 176 176 176 GLN GLN A . n A 1 177 LYS 177 177 177 LYS LYS A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 GLN 179 179 179 GLN GLN A . n A 1 180 GLN 180 180 180 GLN GLN A . n A 1 181 LEU 181 181 181 LEU LEU A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 GLN 186 186 186 GLN GLN A . n A 1 187 GLN 187 187 187 GLN GLN A . n A 1 188 THR 188 188 188 THR THR A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 GLN 190 190 190 GLN GLN A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 TRP 193 193 193 TRP TRP A . n A 1 194 GLN 194 194 194 GLN GLN A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 GLY 196 196 196 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 201 197 ZN ZN A . C 2 ZN 1 202 198 ZN ZN A . D 3 HEM 1 203 203 HEM HEM A . E 4 CL 1 204 200 CL CL A . F 4 CL 1 205 201 CL CL A . G 4 CL 1 206 202 CL CL A . H 5 HOH 1 301 107 HOH HOH A . H 5 HOH 2 302 55 HOH HOH A . H 5 HOH 3 303 45 HOH HOH A . H 5 HOH 4 304 21 HOH HOH A . H 5 HOH 5 305 153 HOH HOH A . H 5 HOH 6 306 51 HOH HOH A . H 5 HOH 7 307 23 HOH HOH A . H 5 HOH 8 308 91 HOH HOH A . H 5 HOH 9 309 127 HOH HOH A . H 5 HOH 10 310 61 HOH HOH A . H 5 HOH 11 311 89 HOH HOH A . H 5 HOH 12 312 65 HOH HOH A . H 5 HOH 13 313 200 HOH HOH A . H 5 HOH 14 314 44 HOH HOH A . H 5 HOH 15 315 25 HOH HOH A . H 5 HOH 16 316 42 HOH HOH A . H 5 HOH 17 317 144 HOH HOH A . H 5 HOH 18 318 24 HOH HOH A . H 5 HOH 19 319 68 HOH HOH A . H 5 HOH 20 320 99 HOH HOH A . H 5 HOH 21 321 76 HOH HOH A . H 5 HOH 22 322 40 HOH HOH A . H 5 HOH 23 323 15 HOH HOH A . H 5 HOH 24 324 194 HOH HOH A . H 5 HOH 25 325 33 HOH HOH A . H 5 HOH 26 326 175 HOH HOH A . H 5 HOH 27 327 53 HOH HOH A . H 5 HOH 28 328 82 HOH HOH A . H 5 HOH 29 329 100 HOH HOH A . H 5 HOH 30 330 183 HOH HOH A . H 5 HOH 31 331 69 HOH HOH A . H 5 HOH 32 332 193 HOH HOH A . H 5 HOH 33 333 1 HOH HOH A . H 5 HOH 34 334 115 HOH HOH A . H 5 HOH 35 335 52 HOH HOH A . H 5 HOH 36 336 77 HOH HOH A . H 5 HOH 37 337 26 HOH HOH A . H 5 HOH 38 338 86 HOH HOH A . H 5 HOH 39 339 93 HOH HOH A . H 5 HOH 40 340 81 HOH HOH A . H 5 HOH 41 341 48 HOH HOH A . H 5 HOH 42 342 92 HOH HOH A . H 5 HOH 43 343 60 HOH HOH A . H 5 HOH 44 344 59 HOH HOH A . H 5 HOH 45 345 125 HOH HOH A . H 5 HOH 46 346 8 HOH HOH A . H 5 HOH 47 347 54 HOH HOH A . H 5 HOH 48 348 73 HOH HOH A . H 5 HOH 49 349 84 HOH HOH A . H 5 HOH 50 350 114 HOH HOH A . H 5 HOH 51 351 50 HOH HOH A . H 5 HOH 52 352 102 HOH HOH A . H 5 HOH 53 353 97 HOH HOH A . H 5 HOH 54 354 159 HOH HOH A . H 5 HOH 55 355 198 HOH HOH A . H 5 HOH 56 356 12 HOH HOH A . H 5 HOH 57 357 18 HOH HOH A . H 5 HOH 58 358 108 HOH HOH A . H 5 HOH 59 359 174 HOH HOH A . H 5 HOH 60 360 22 HOH HOH A . H 5 HOH 61 361 67 HOH HOH A . H 5 HOH 62 362 46 HOH HOH A . H 5 HOH 63 363 5 HOH HOH A . H 5 HOH 64 364 96 HOH HOH A . H 5 HOH 65 365 32 HOH HOH A . H 5 HOH 66 366 7 HOH HOH A . H 5 HOH 67 367 29 HOH HOH A . H 5 HOH 68 368 146 HOH HOH A . H 5 HOH 69 369 167 HOH HOH A . H 5 HOH 70 370 128 HOH HOH A . H 5 HOH 71 371 203 HOH HOH A . H 5 HOH 72 372 78 HOH HOH A . H 5 HOH 73 373 20 HOH HOH A . H 5 HOH 74 374 179 HOH HOH A . H 5 HOH 75 375 88 HOH HOH A . H 5 HOH 76 376 71 HOH HOH A . H 5 HOH 77 377 3 HOH HOH A . H 5 HOH 78 378 149 HOH HOH A . H 5 HOH 79 379 47 HOH HOH A . H 5 HOH 80 380 72 HOH HOH A . H 5 HOH 81 381 35 HOH HOH A . H 5 HOH 82 382 31 HOH HOH A . H 5 HOH 83 383 75 HOH HOH A . H 5 HOH 84 384 63 HOH HOH A . H 5 HOH 85 385 152 HOH HOH A . H 5 HOH 86 386 141 HOH HOH A . H 5 HOH 87 387 142 HOH HOH A . H 5 HOH 88 388 177 HOH HOH A . H 5 HOH 89 389 11 HOH HOH A . H 5 HOH 90 390 27 HOH HOH A . H 5 HOH 91 391 116 HOH HOH A . H 5 HOH 92 392 13 HOH HOH A . H 5 HOH 93 393 155 HOH HOH A . H 5 HOH 94 394 204 HOH HOH A . H 5 HOH 95 395 43 HOH HOH A . H 5 HOH 96 396 110 HOH HOH A . H 5 HOH 97 397 34 HOH HOH A . H 5 HOH 98 398 38 HOH HOH A . H 5 HOH 99 399 98 HOH HOH A . H 5 HOH 100 400 37 HOH HOH A . H 5 HOH 101 401 123 HOH HOH A . H 5 HOH 102 402 17 HOH HOH A . H 5 HOH 103 403 36 HOH HOH A . H 5 HOH 104 404 70 HOH HOH A . H 5 HOH 105 405 4 HOH HOH A . H 5 HOH 106 406 64 HOH HOH A . H 5 HOH 107 407 56 HOH HOH A . H 5 HOH 108 408 9 HOH HOH A . H 5 HOH 109 409 95 HOH HOH A . H 5 HOH 110 410 121 HOH HOH A . H 5 HOH 111 411 164 HOH HOH A . H 5 HOH 112 412 28 HOH HOH A . H 5 HOH 113 413 14 HOH HOH A . H 5 HOH 114 414 19 HOH HOH A . H 5 HOH 115 415 41 HOH HOH A . H 5 HOH 116 416 162 HOH HOH A . H 5 HOH 117 417 148 HOH HOH A . H 5 HOH 118 418 113 HOH HOH A . H 5 HOH 119 419 197 HOH HOH A . H 5 HOH 120 420 173 HOH HOH A . H 5 HOH 121 421 145 HOH HOH A . H 5 HOH 122 422 139 HOH HOH A . H 5 HOH 123 423 143 HOH HOH A . H 5 HOH 124 424 16 HOH HOH A . H 5 HOH 125 425 126 HOH HOH A . H 5 HOH 126 426 58 HOH HOH A . H 5 HOH 127 427 184 HOH HOH A . H 5 HOH 128 428 202 HOH HOH A . H 5 HOH 129 429 129 HOH HOH A . H 5 HOH 130 430 6 HOH HOH A . H 5 HOH 131 431 111 HOH HOH A . H 5 HOH 132 432 112 HOH HOH A . H 5 HOH 133 433 161 HOH HOH A . H 5 HOH 134 434 101 HOH HOH A . H 5 HOH 135 435 62 HOH HOH A . H 5 HOH 136 436 74 HOH HOH A . H 5 HOH 137 437 166 HOH HOH A . H 5 HOH 138 438 83 HOH HOH A . H 5 HOH 139 439 30 HOH HOH A . H 5 HOH 140 440 205 HOH HOH A . H 5 HOH 141 441 109 HOH HOH A . H 5 HOH 142 442 10 HOH HOH A . H 5 HOH 143 443 157 HOH HOH A . H 5 HOH 144 444 169 HOH HOH A . H 5 HOH 145 445 130 HOH HOH A . H 5 HOH 146 446 172 HOH HOH A . H 5 HOH 147 447 87 HOH HOH A . H 5 HOH 148 448 2 HOH HOH A . H 5 HOH 149 449 182 HOH HOH A . H 5 HOH 150 450 66 HOH HOH A . H 5 HOH 151 451 119 HOH HOH A . H 5 HOH 152 452 201 HOH HOH A . H 5 HOH 153 453 160 HOH HOH A . H 5 HOH 154 454 118 HOH HOH A . H 5 HOH 155 455 171 HOH HOH A . H 5 HOH 156 456 195 HOH HOH A . H 5 HOH 157 457 135 HOH HOH A . H 5 HOH 158 458 163 HOH HOH A . H 5 HOH 159 459 57 HOH HOH A . H 5 HOH 160 460 178 HOH HOH A . H 5 HOH 161 461 79 HOH HOH A . H 5 HOH 162 462 138 HOH HOH A . H 5 HOH 163 463 80 HOH HOH A . H 5 HOH 164 464 85 HOH HOH A . H 5 HOH 165 465 206 HOH HOH A . H 5 HOH 166 466 105 HOH HOH A . H 5 HOH 167 467 122 HOH HOH A . H 5 HOH 168 468 94 HOH HOH A . H 5 HOH 169 469 158 HOH HOH A . H 5 HOH 170 470 90 HOH HOH A . H 5 HOH 171 471 104 HOH HOH A . H 5 HOH 172 472 151 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 348 ? H HOH . 2 1 A HOH 362 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NA A D HEM . ? A HEM 203 ? 1_555 92.8 ? 2 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NB A D HEM . ? A HEM 203 ? 1_555 90.8 ? 3 NA A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NB A D HEM . ? A HEM 203 ? 1_555 88.3 ? 4 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 85.6 ? 5 NA A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 177.0 ? 6 NB A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 89.2 ? 7 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 86.2 ? 8 NA A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 91.0 ? 9 NB A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 176.9 ? 10 NC A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 91.4 ? 11 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 176.2 ? 12 NA A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 89.8 ? 13 NB A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 92.1 ? 14 NC A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 91.9 ? 15 ND A D HEM . ? A HEM 203 ? 1_555 FE A D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 90.9 ? 16 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NA A D HEM . ? A HEM 203 ? 1_555 93.4 ? 17 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NB A D HEM . ? A HEM 203 ? 1_555 91.3 ? 18 NA A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NB A D HEM . ? A HEM 203 ? 1_555 88.9 ? 19 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 85.4 ? 20 NA A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 177.7 ? 21 NB A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NC A D HEM . ? A HEM 203 ? 1_555 89.1 ? 22 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 86.2 ? 23 NA A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 91.2 ? 24 NB A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 177.5 ? 25 NC A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 ND A D HEM . ? A HEM 203 ? 1_555 90.7 ? 26 NE2 ? A HIS 9 ? A HIS 9 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 175.2 ? 27 NA A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 90.0 ? 28 NB A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 92.1 ? 29 NC A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 91.3 ? 30 ND A D HEM . ? A HEM 203 ? 1_555 FE B D HEM . ? A HEM 203 ? 1_555 NE2 ? A HIS 110 ? A HIS 110 ? 1_555 90.4 ? 31 OE2 ? A GLU 34 ? A GLU 34 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 64 ? A GLU 64 ? 1_555 106.8 ? 32 OE2 ? A GLU 34 ? A GLU 34 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 67 ? A HIS 67 ? 1_555 106.1 ? 33 OE1 ? A GLU 64 ? A GLU 64 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 67 ? A HIS 67 ? 1_555 108.6 ? 34 OE2 ? A GLU 34 ? A GLU 34 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 135 ? A GLU 135 ? 1_555 121.8 ? 35 OE1 ? A GLU 64 ? A GLU 64 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 135 ? A GLU 135 ? 1_555 115.9 ? 36 ND1 ? A HIS 67 ? A HIS 67 ? 1_555 ZN ? C ZN . ? A ZN 202 ? 1_555 OE1 ? A GLU 135 ? A GLU 135 ? 1_555 96.0 ? 37 OD2 ? A ASP 63 ? A ASP 63 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 OD1 ? A ASP 134 ? A ASP 134 ? 1_555 113.1 ? 38 OD2 ? A ASP 63 ? A ASP 63 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 138 ? A HIS 138 ? 1_555 118.1 ? 39 OD1 ? A ASP 134 ? A ASP 134 ? 1_555 ZN ? B ZN . ? A ZN 201 ? 1_555 NE2 ? A HIS 138 ? A HIS 138 ? 1_555 105.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-04-25 2 'Structure model' 1 1 2022-03-16 3 'Structure model' 1 2 2022-08-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' pdbx_audit_support 3 3 'Structure model' citation 4 3 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_audit_support.funding_organization' 4 3 'Structure model' '_citation.country' 5 3 'Structure model' '_citation.journal_abbrev' 6 3 'Structure model' '_citation.journal_id_CSD' 7 3 'Structure model' '_citation.journal_id_ISSN' 8 3 'Structure model' '_citation.journal_volume' 9 3 'Structure model' '_citation.page_first' 10 3 'Structure model' '_citation.page_last' 11 3 'Structure model' '_citation.pdbx_database_id_DOI' 12 3 'Structure model' '_citation.pdbx_database_id_PubMed' 13 3 'Structure model' '_citation.title' 14 3 'Structure model' '_citation.year' # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? 'VERSION July 4, 2012 BUILT=20130706' 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0131 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 4 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'VERSION March 30, 2013' 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OG A SER 2 ? ? O A HOH 301 ? ? 2.14 2 1 OE2 A GLU 140 ? ? O A HOH 302 ? ? 2.15 3 1 OE1 A GLU 156 ? ? O A HOH 303 ? ? 2.17 4 1 OE2 A GLU 135 ? ? O A HOH 304 ? ? 2.17 5 1 OE1 A GLU 34 ? ? O A HOH 304 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 307 ? ? 1_555 O A HOH 310 ? ? 6_555 1.88 2 1 O A HOH 387 ? ? 1_555 O A HOH 426 ? ? 7_556 2.10 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CD A GLU 62 ? ? OE2 A GLU 62 ? ? 1.327 1.252 0.075 0.011 N 2 1 CD A GLU 64 ? ? OE2 A GLU 64 ? ? 1.321 1.252 0.069 0.011 N 3 1 CD A GLU 69 ? ? OE1 A GLU 69 ? ? 1.323 1.252 0.071 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH1 A ARG 28 ? ? 124.19 120.30 3.89 0.50 N 2 1 NE A ARG 28 ? ? CZ A ARG 28 ? ? NH2 A ARG 28 ? ? 115.78 120.30 -4.52 0.50 N 3 1 CG A ARG 42 ? ? CD A ARG 42 ? ? NE A ARG 42 ? ? 99.03 111.80 -12.77 2.10 N 4 1 NE A ARG 49 ? ? CZ A ARG 49 ? ? NH1 A ARG 49 ? ? 123.31 120.30 3.01 0.50 N 5 1 CB A ASP 63 ? ? CG A ASP 63 ? ? OD1 A ASP 63 ? ? 125.84 118.30 7.54 0.90 N 6 1 CA A LEU 127 ? ? CB A LEU 127 ? ? CG A LEU 127 ? ? 134.23 115.30 18.93 2.30 N # _pdbx_audit_support.funding_organization 'Department of Energy (DOE, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number DESC0001035 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'PROTOPORPHYRIN IX CONTAINING FE' HEM 4 'CHLORIDE ION' CL 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #