HEADER LIGASE/LIGASE INHIBITOR 20-APR-17 5VK0 TITLE CRYSTAL STRUCTURE OF HUMAN MDM2 IN COMPLEX WITH A 12-MER LYSINE- TITLE 2 CYSTEINE SIDE CHAIN DITHIOCARBAMATE STAPLED PEPTIDE INHIBITOR PMI COMPND MOL_ID: 1; COMPND 2 MOLECULE: E3 UBIQUITIN-PROTEIN LIGASE MDM2; COMPND 3 CHAIN: A, C, E, G, I, K, M, O, Q, S, U, W; COMPND 4 FRAGMENT: RESIDUES 25-109; COMPND 5 SYNONYM: DOUBLE MINUTE 2 PROTEIN,HDM2,ONCOPROTEIN MDM2,RING-TYPE E3 COMPND 6 UBIQUITIN TRANSFERASE MDM2,P53-BINDING PROTEIN MDM2; COMPND 7 EC: 2.3.2.27; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: LYSINE-CYSTEINE SIDE CHAIN DITHIOCARBAMATE STAPLED PEPTIDE COMPND 11 INHIBITOR PMI; COMPND 12 CHAIN: B, D, F, H, J, L, N, P, R, T, V, X; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_COMMON: HUMAN; SOURCE 5 ORGANISM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 SYNTHETIC: YES; SOURCE 8 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 9 ORGANISM_TAXID: 32630 KEYWDS MDM2-PEPTIDE INHIBITOR COMPLEX, ONCOPROTEIN, HOST-VIRUS INTERACTION, KEYWDS 2 LIGASE, METAL-BINDING, NUCLEUS, PHOSPHOPROTEIN, PROTO-ONCOGENE, UBL KEYWDS 3 CONJUGATION PATHWAY, ZINC-FINGER, STAPLED PEPTIDE, LIGASE-LIGASE KEYWDS 4 INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.D.TOLBERT,N.GOHAIN,M.PAZGIER REVDAT 5 04-OCT-23 5VK0 1 REMARK REVDAT 4 11-DEC-19 5VK0 1 REMARK REVDAT 3 13-MAR-19 5VK0 1 JRNL REVDAT 2 30-JAN-19 5VK0 1 SOURCE JRNL REVDAT 1 25-APR-18 5VK0 0 JRNL AUTH X.LI,W.D.TOLBERT,H.G.HU,N.GOHAIN,Y.ZOU,F.NIU,W.X.HE,W.YUAN, JRNL AUTH 2 J.C.SU,M.PAZGIER,W.LU JRNL TITL DITHIOCARBAMATE-INSPIRED SIDE CHAIN STAPLING CHEMISTRY FOR JRNL TITL 2 PEPTIDE DRUG DESIGN. JRNL REF CHEM SCI V. 10 1522 2019 JRNL REFN ISSN 2041-6520 JRNL PMID 30809370 JRNL DOI 10.1039/C8SC03275K REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.2 REMARK 3 NUMBER OF REFLECTIONS : 116968 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 6374 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8459 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.1850 REMARK 3 BIN FREE R VALUE SET COUNT : 517 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9689 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 418 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 10.80000 REMARK 3 B22 (A**2) : 5.31000 REMARK 3 B33 (A**2) : -16.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.028 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.029 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.079 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.755 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9948 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 9777 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13252 ; 2.495 ; 1.999 REMARK 3 BOND ANGLES OTHERS (DEGREES): 22567 ; 1.372 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1118 ; 9.274 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 406 ;43.171 ;23.202 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1872 ;20.576 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 48 ;20.436 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1504 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10282 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2042 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4661 ; 0.976 ; 1.931 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 4659 ; 0.976 ; 1.931 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5676 ; 1.348 ; 2.873 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 5677 ; 1.348 ; 2.873 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5286 ; 0.848 ; 1.986 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 5287 ; 0.848 ; 1.986 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 7575 ; 1.184 ; 2.955 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 41030 ; 3.091 ;36.514 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 41028 ; 3.091 ;36.514 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 3 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.338 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : 1/2H+1/2K, 3/2H-1/2K, -L REMARK 3 TWIN FRACTION : 0.320 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : -1/2H+1/2K, 3/2H+1/2K, -L REMARK 3 TWIN FRACTION : 0.343 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 109 REMARK 3 ORIGIN FOR THE GROUP (A): -3.6307 -20.1555 -27.7916 REMARK 3 T TENSOR REMARK 3 T11: 0.0444 T22: 0.0243 REMARK 3 T33: 0.0219 T12: 0.0019 REMARK 3 T13: 0.0234 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.6328 L22: 3.3814 REMARK 3 L33: 1.1028 L12: -0.8575 REMARK 3 L13: 0.0574 L23: -0.3780 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.0415 S13: -0.0538 REMARK 3 S21: 0.2354 S22: 0.0102 S23: 0.2453 REMARK 3 S31: -0.0285 S32: 0.0554 S33: -0.0473 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 25 C 109 REMARK 3 ORIGIN FOR THE GROUP (A): 18.7900 19.1983 -27.8852 REMARK 3 T TENSOR REMARK 3 T11: 0.0231 T22: 0.0147 REMARK 3 T33: 0.0047 T12: 0.0041 REMARK 3 T13: 0.0072 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.8466 L22: 3.4754 REMARK 3 L33: 1.1189 L12: -0.4677 REMARK 3 L13: -0.0771 L23: -0.2125 REMARK 3 S TENSOR REMARK 3 S11: 0.0399 S12: 0.0594 S13: 0.0001 REMARK 3 S21: 0.2031 S22: -0.0184 S23: 0.0943 REMARK 3 S31: 0.0267 S32: 0.0780 S33: -0.0214 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 26 E 108 REMARK 3 ORIGIN FOR THE GROUP (A): 39.7361 -22.9086 -27.1111 REMARK 3 T TENSOR REMARK 3 T11: 0.0502 T22: 0.1001 REMARK 3 T33: 0.0585 T12: 0.0121 REMARK 3 T13: -0.0062 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.4218 L22: 2.6617 REMARK 3 L33: 1.0204 L12: -0.1985 REMARK 3 L13: -0.0754 L23: 0.1338 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0203 S13: -0.0100 REMARK 3 S21: 0.2022 S22: -0.0228 S23: 0.0490 REMARK 3 S31: -0.0762 S32: -0.0323 S33: 0.0250 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : G 25 G 109 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6930 -33.2233 -60.6782 REMARK 3 T TENSOR REMARK 3 T11: 0.0706 T22: 0.0373 REMARK 3 T33: 0.0270 T12: 0.0331 REMARK 3 T13: 0.0349 T23: 0.0295 REMARK 3 L TENSOR REMARK 3 L11: 2.3221 L22: 0.6929 REMARK 3 L33: 2.0374 L12: 0.2788 REMARK 3 L13: -0.4931 L23: 0.0936 REMARK 3 S TENSOR REMARK 3 S11: 0.0366 S12: 0.1449 S13: 0.0425 REMARK 3 S21: -0.2061 S22: -0.0956 S23: -0.1135 REMARK 3 S31: -0.1295 S32: 0.0756 S33: 0.0590 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 26 I 109 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2439 6.7174 -37.9134 REMARK 3 T TENSOR REMARK 3 T11: 0.0407 T22: 0.0153 REMARK 3 T33: 0.0354 T12: -0.0057 REMARK 3 T13: 0.0134 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 1.9429 L22: 1.9129 REMARK 3 L33: 1.8922 L12: -0.0890 REMARK 3 L13: -0.1518 L23: -0.0756 REMARK 3 S TENSOR REMARK 3 S11: -0.0239 S12: -0.1120 S13: 0.0946 REMARK 3 S21: 0.2402 S22: -0.0981 S23: 0.1942 REMARK 3 S31: -0.1487 S32: -0.0653 S33: 0.1220 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : K 27 K 109 REMARK 3 ORIGIN FOR THE GROUP (A): 37.7255 -13.2251 -4.8078 REMARK 3 T TENSOR REMARK 3 T11: 0.0906 T22: 0.0903 REMARK 3 T33: 0.1225 T12: -0.0105 REMARK 3 T13: 0.0023 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.9462 L22: 1.4243 REMARK 3 L33: 1.5730 L12: 0.1488 REMARK 3 L13: -0.2543 L23: 0.0713 REMARK 3 S TENSOR REMARK 3 S11: -0.0672 S12: -0.1938 S13: 0.0339 REMARK 3 S21: 0.0861 S22: 0.0460 S23: -0.0070 REMARK 3 S31: -0.0257 S32: -0.0033 S33: 0.0212 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : M 25 M 109 REMARK 3 ORIGIN FOR THE GROUP (A): -7.8470 -12.4535 -5.1783 REMARK 3 T TENSOR REMARK 3 T11: 0.0773 T22: 0.0728 REMARK 3 T33: 0.0957 T12: -0.0280 REMARK 3 T13: -0.0032 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 0.6712 L22: 1.0095 REMARK 3 L33: 1.6043 L12: -0.2696 REMARK 3 L13: -0.3289 L23: 0.0273 REMARK 3 S TENSOR REMARK 3 S11: 0.0205 S12: -0.1418 S13: 0.0616 REMARK 3 S21: 0.0591 S22: -0.0204 S23: -0.0141 REMARK 3 S31: -0.0443 S32: 0.1150 S33: -0.0000 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : O 26 O 108 REMARK 3 ORIGIN FOR THE GROUP (A): 12.0286 -26.5527 5.8769 REMARK 3 T TENSOR REMARK 3 T11: 0.1063 T22: 0.0934 REMARK 3 T33: 0.0878 T12: 0.0167 REMARK 3 T13: -0.0019 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.0141 L22: 1.0544 REMARK 3 L33: 1.1291 L12: 0.1670 REMARK 3 L13: 0.4649 L23: 0.3477 REMARK 3 S TENSOR REMARK 3 S11: -0.0045 S12: 0.1047 S13: -0.0502 REMARK 3 S21: -0.0868 S22: 0.0291 S23: 0.0368 REMARK 3 S31: -0.0752 S32: -0.0455 S33: -0.0246 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : Q 26 Q 108 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9104 -35.4843 -38.8081 REMARK 3 T TENSOR REMARK 3 T11: 0.0452 T22: 0.0157 REMARK 3 T33: 0.0128 T12: 0.0042 REMARK 3 T13: 0.0206 T23: 0.0076 REMARK 3 L TENSOR REMARK 3 L11: 2.3716 L22: 1.0573 REMARK 3 L33: 1.8551 L12: -0.3921 REMARK 3 L13: -0.6671 L23: -0.1313 REMARK 3 S TENSOR REMARK 3 S11: -0.0368 S12: -0.1819 S13: -0.1009 REMARK 3 S21: 0.2110 S22: 0.0273 S23: 0.1084 REMARK 3 S31: 0.0220 S32: 0.1041 S33: 0.0094 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : S 25 S 109 REMARK 3 ORIGIN FOR THE GROUP (A): 17.4170 -62.8870 -26.6420 REMARK 3 T TENSOR REMARK 3 T11: 0.0225 T22: 0.0596 REMARK 3 T33: 0.0614 T12: 0.0152 REMARK 3 T13: 0.0049 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.0772 L22: 3.0328 REMARK 3 L33: 1.3374 L12: -0.2099 REMARK 3 L13: -0.0620 L23: -0.0303 REMARK 3 S TENSOR REMARK 3 S11: -0.0287 S12: 0.0484 S13: -0.0266 REMARK 3 S21: 0.1365 S22: 0.0387 S23: 0.0935 REMARK 3 S31: -0.0451 S32: -0.0623 S33: -0.0100 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : U 25 U 108 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0818 -52.3736 -5.9983 REMARK 3 T TENSOR REMARK 3 T11: 0.1135 T22: 0.0999 REMARK 3 T33: 0.1198 T12: -0.0256 REMARK 3 T13: 0.0059 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.3724 L22: 1.2111 REMARK 3 L33: 1.0098 L12: -0.7227 REMARK 3 L13: -0.1047 L23: -0.1157 REMARK 3 S TENSOR REMARK 3 S11: -0.0088 S12: -0.1654 S13: 0.0011 REMARK 3 S21: 0.1633 S22: 0.0192 S23: 0.1156 REMARK 3 S31: 0.0171 S32: -0.0472 S33: -0.0104 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : W 25 W 108 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6271 2.7405 -38.6800 REMARK 3 T TENSOR REMARK 3 T11: 0.0502 T22: 0.0300 REMARK 3 T33: 0.0211 T12: -0.0079 REMARK 3 T13: 0.0213 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 2.6103 L22: 1.3953 REMARK 3 L33: 2.2447 L12: 0.0618 REMARK 3 L13: -0.1045 L23: -0.3519 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: -0.2350 S13: 0.0773 REMARK 3 S21: 0.2639 S22: -0.0380 S23: 0.1035 REMARK 3 S31: -0.0591 S32: -0.1134 S33: 0.0258 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5VK0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000226506. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 123372 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.07600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.29900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EQS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1340 MM AMMONIUM SULFATE, 6.7% REMARK 280 GLYCEROL, 50 MM MAGNESIUM SULFATE, 100 MM IMIDAZOLE PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 98.32500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 98.32500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.41900 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 78.73500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.41900 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 78.73500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 98.32500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.41900 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 78.73500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 98.32500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.41900 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 78.73500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6050 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: I, J REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 7 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: M, N REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 8 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: O, P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 9 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5690 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: Q, R REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 10 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: S, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 11 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -12.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: U, V REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 12 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5950 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: W, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU E 25 REMARK 465 VAL E 109 REMARK 465 GLU O 25 REMARK 465 VAL O 109 REMARK 465 GLU Q 25 REMARK 465 VAL Q 109 REMARK 465 VAL U 109 REMARK 465 VAL W 109 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O CYS L 12 N NH2 L 13 1.79 REMARK 500 O CYS N 12 N NH2 N 13 1.80 REMARK 500 O LYS U 94 ND1 HIS U 96 1.89 REMARK 500 O MET U 102 ND2 ASN U 106 1.95 REMARK 500 NH2 ARG U 105 O HOH U 201 1.97 REMARK 500 OH TYR S 60 OD1 ASP S 80 2.03 REMARK 500 SG CYS U 77 O HOH U 211 2.06 REMARK 500 OE1 GLN O 59 OG1 THR O 63 2.13 REMARK 500 OG1 THR L 1 O HOH L 101 2.14 REMARK 500 OH TYR Q 48 O HOH Q 201 2.15 REMARK 500 O ILE M 74 O HOH M 201 2.16 REMARK 500 O HOH X 206 O HOH X 208 2.16 REMARK 500 NH1 ARG Q 105 O HOH Q 202 2.18 REMARK 500 OG SER T 2 NE2 GLN U 59 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OG SER K 78 ND1 HIS U 96 8545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 85 CA - CB - CG ANGL. DEV. = 17.5 DEGREES REMARK 500 ARG A 105 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 105 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ACE B 0 O - C - N ANGL. DEV. = -18.8 DEGREES REMARK 500 9E7 B 8 O - C - N ANGL. DEV. = -24.3 DEGREES REMARK 500 CYS B 12 O - C - N ANGL. DEV. = -11.4 DEGREES REMARK 500 ASP C 68 CB - CG - OD1 ANGL. DEV. = 7.7 DEGREES REMARK 500 VAL C 109 CA - C - O ANGL. DEV. = -14.7 DEGREES REMARK 500 ACE D 0 O - C - N ANGL. DEV. = -24.7 DEGREES REMARK 500 THR D 1 C - N - CA ANGL. DEV. = 43.8 DEGREES REMARK 500 TRP D 7 O - C - N ANGL. DEV. = -12.6 DEGREES REMARK 500 9E7 D 8 O - C - N ANGL. DEV. = -23.2 DEGREES REMARK 500 LEU D 9 C - N - CA ANGL. DEV. = 16.4 DEGREES REMARK 500 CYS D 12 CA - C - N ANGL. DEV. = 20.8 DEGREES REMARK 500 CYS D 12 O - C - N ANGL. DEV. = -29.8 DEGREES REMARK 500 PRO E 89 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 ACE F 0 O - C - N ANGL. DEV. = -30.5 DEGREES REMARK 500 THR F 1 C - N - CA ANGL. DEV. = 31.1 DEGREES REMARK 500 TRP F 7 CA - C - N ANGL. DEV. = 13.2 DEGREES REMARK 500 TRP F 7 O - C - N ANGL. DEV. = -13.0 DEGREES REMARK 500 9E7 F 8 C - N - CA ANGL. DEV. = 21.4 DEGREES REMARK 500 9E7 F 8 O - C - N ANGL. DEV. = -12.5 DEGREES REMARK 500 CYS F 12 O - C - N ANGL. DEV. = -10.3 DEGREES REMARK 500 CYS G 77 CA - CB - SG ANGL. DEV. = 9.4 DEGREES REMARK 500 ACE H 0 O - C - N ANGL. DEV. = -25.5 DEGREES REMARK 500 CYS H 12 O - C - N ANGL. DEV. = -14.6 DEGREES REMARK 500 ACE J 0 O - C - N ANGL. DEV. = -19.0 DEGREES REMARK 500 9E7 J 8 O - C - N ANGL. DEV. = -15.2 DEGREES REMARK 500 CYS J 12 CA - C - N ANGL. DEV. = 26.8 DEGREES REMARK 500 CYS J 12 O - C - N ANGL. DEV. = -26.9 DEGREES REMARK 500 GLN K 71 N - CA - C ANGL. DEV. = -18.1 DEGREES REMARK 500 ASP K 84 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 PRO K 89 C - N - CA ANGL. DEV. = 14.7 DEGREES REMARK 500 ACE L 0 O - C - N ANGL. DEV. = -12.3 DEGREES REMARK 500 TRP L 7 O - C - N ANGL. DEV. = -22.8 DEGREES REMARK 500 CYS L 12 CA - C - N ANGL. DEV. = 13.3 DEGREES REMARK 500 CYS L 12 O - C - N ANGL. DEV. = -31.1 DEGREES REMARK 500 PRO M 32 C - N - CA ANGL. DEV. = 9.9 DEGREES REMARK 500 ARG M 105 NE - CZ - NH1 ANGL. DEV. = 3.8 DEGREES REMARK 500 ACE N 0 O - C - N ANGL. DEV. = -26.2 DEGREES REMARK 500 THR N 1 C - N - CA ANGL. DEV. = 27.6 DEGREES REMARK 500 CYS N 12 CA - C - N ANGL. DEV. = 27.7 DEGREES REMARK 500 CYS N 12 O - C - N ANGL. DEV. = -32.6 DEGREES REMARK 500 ASP O 46 CB - CG - OD2 ANGL. DEV. = -5.7 DEGREES REMARK 500 CYS O 77 CA - CB - SG ANGL. DEV. = 6.7 DEGREES REMARK 500 ACE P 0 O - C - N ANGL. DEV. = -13.0 DEGREES REMARK 500 THR P 1 C - N - CA ANGL. DEV. = 33.2 DEGREES REMARK 500 TRP P 7 CA - C - N ANGL. DEV. = 21.2 DEGREES REMARK 500 TRP P 7 O - C - N ANGL. DEV. = -21.1 DEGREES REMARK 500 9E7 P 8 C - N - CA ANGL. DEV. = 31.8 DEGREES REMARK 500 REMARK 500 THIS ENTRY HAS 77 ANGLE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 26 105.16 18.44 REMARK 500 ARG A 65 60.25 30.95 REMARK 500 ALA B 4 -59.26 -29.87 REMARK 500 SER B 11 -148.20 -65.53 REMARK 500 SER D 11 -78.85 -124.72 REMARK 500 ARG E 65 77.33 48.86 REMARK 500 GLN E 71 79.17 -106.29 REMARK 500 CYS E 77 29.79 -155.33 REMARK 500 LEU E 107 -113.17 -134.83 REMARK 500 LEU G 81 -33.64 -39.09 REMARK 500 THR I 26 144.20 179.62 REMARK 500 GLN I 44 -3.30 -141.69 REMARK 500 SER J 11 -73.00 -112.97 REMARK 500 PRO K 32 -77.32 -31.50 REMARK 500 ALA K 43 97.42 -55.52 REMARK 500 GLN K 44 29.22 -76.55 REMARK 500 ARG K 65 49.57 73.83 REMARK 500 GLN K 72 43.92 -154.21 REMARK 500 PRO K 89 -15.21 -30.82 REMARK 500 VAL K 93 -8.84 -57.49 REMARK 500 LEU L 10 -24.07 -34.16 REMARK 500 SER L 11 -100.70 -172.76 REMARK 500 PRO M 32 -95.28 -29.70 REMARK 500 ALA M 43 129.79 -14.08 REMARK 500 SER M 78 154.46 -48.26 REMARK 500 GLU M 95 75.50 -102.34 REMARK 500 LEU O 27 135.47 82.63 REMARK 500 ALA O 43 140.15 137.27 REMARK 500 GLN O 44 21.07 -145.59 REMARK 500 ARG O 65 42.63 75.88 REMARK 500 CYS O 77 33.47 -157.62 REMARK 500 ASP O 84 -61.92 -18.93 REMARK 500 GLU O 95 59.60 -106.12 REMARK 500 ARG O 97 -95.31 -27.66 REMARK 500 ILE O 99 -70.12 -63.78 REMARK 500 LEU P 9 36.70 -45.91 REMARK 500 LEU P 10 49.93 -174.35 REMARK 500 SER P 11 -142.52 175.95 REMARK 500 CYS Q 77 19.09 -142.75 REMARK 500 GLN S 44 12.67 -142.25 REMARK 500 PHE S 55 -42.51 -158.22 REMARK 500 ARG S 65 15.39 85.02 REMARK 500 SER S 78 112.44 -28.41 REMARK 500 ASN S 79 -9.70 79.10 REMARK 500 LEU S 81 -48.68 -19.44 REMARK 500 GLU S 95 60.37 -103.35 REMARK 500 VAL S 108 -136.72 -87.78 REMARK 500 ARG U 65 66.10 7.91 REMARK 500 ASP U 68 -147.29 -105.51 REMARK 500 GLU U 69 -54.10 -147.71 REMARK 500 REMARK 500 THIS ENTRY HAS 59 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 SER D 11 CYS D 12 -128.38 REMARK 500 PRO K 89 SER K 90 145.18 REMARK 500 9E7 P 8 LEU P 9 125.79 REMARK 500 LEU Q 107 VAL Q 108 126.00 REMARK 500 GLN U 44 LYS U 45 -148.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 9E7 B 8 -34.86 REMARK 500 TRP D 7 -11.83 REMARK 500 9E7 D 8 -35.37 REMARK 500 9E7 F 8 -25.76 REMARK 500 9E7 H 8 -22.00 REMARK 500 9E7 J 8 -29.31 REMARK 500 TRP L 7 -31.76 REMARK 500 9E7 L 8 -24.83 REMARK 500 9E7 N 8 -19.34 REMARK 500 9E7 P 8 -27.29 REMARK 500 TRP R 7 12.21 REMARK 500 9E7 R 8 -24.02 REMARK 500 9E7 T 8 -39.69 REMARK 500 9E7 V 8 -20.59 REMARK 500 9E7 X 8 -15.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH K 224 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH K 225 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH M 242 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH U 238 DISTANCE = 5.90 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL X 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EQS RELATED DB: PDB REMARK 900 3EQS CONTAINS SAME MDM2 PROTEIN WITH UNSTAPLED PMI PEPTIDE. REMARK 900 RELATED ID: 5VK1 RELATED DB: PDB DBREF 5VK0 A 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 B 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 C 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 D 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 E 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 F 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 G 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 H 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 I 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 J 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 K 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 L 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 M 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 N 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 O 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 P 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 Q 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 R 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 S 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 T 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 U 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 V 0 13 PDB 5VK0 5VK0 0 13 DBREF 5VK0 W 25 109 UNP Q00987 MDM2_HUMAN 25 109 DBREF 5VK0 X 0 13 PDB 5VK0 5VK0 0 13 SEQRES 1 A 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 A 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 A 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 A 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 A 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 A 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 A 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 B 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 B 14 NH2 SEQRES 1 C 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 C 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 C 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 C 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 C 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 C 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 C 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 D 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 D 14 NH2 SEQRES 1 E 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 E 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 E 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 E 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 E 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 E 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 E 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 F 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 F 14 NH2 SEQRES 1 G 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 G 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 G 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 G 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 G 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 G 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 G 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 H 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 H 14 NH2 SEQRES 1 I 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 I 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 I 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 I 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 I 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 I 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 I 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 J 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 J 14 NH2 SEQRES 1 K 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 K 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 K 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 K 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 K 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 K 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 K 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 L 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 L 14 NH2 SEQRES 1 M 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 M 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 M 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 M 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 M 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 M 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 M 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 N 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 N 14 NH2 SEQRES 1 O 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 O 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 O 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 O 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 O 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 O 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 O 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 P 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 P 14 NH2 SEQRES 1 Q 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 Q 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 Q 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 Q 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 Q 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 Q 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 Q 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 R 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 R 14 NH2 SEQRES 1 S 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 S 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 S 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 S 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 S 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 S 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 S 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 T 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 T 14 NH2 SEQRES 1 U 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 U 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 U 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 U 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 U 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 U 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 U 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 V 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 V 14 NH2 SEQRES 1 W 85 GLU THR LEU VAL ARG PRO LYS PRO LEU LEU LEU LYS LEU SEQRES 2 W 85 LEU LYS SER VAL GLY ALA GLN LYS ASP THR TYR THR MET SEQRES 3 W 85 LYS GLU VAL LEU PHE TYR LEU GLY GLN TYR ILE MET THR SEQRES 4 W 85 LYS ARG LEU TYR ASP GLU LYS GLN GLN HIS ILE VAL TYR SEQRES 5 W 85 CYS SER ASN ASP LEU LEU GLY ASP LEU PHE GLY VAL PRO SEQRES 6 W 85 SER PHE SER VAL LYS GLU HIS ARG LYS ILE TYR THR MET SEQRES 7 W 85 ILE TYR ARG ASN LEU VAL VAL SEQRES 1 X 14 ACE THR SER PHE ALA GLU TYR TRP 9E7 LEU LEU SER CYS SEQRES 2 X 14 NH2 HET ACE B 0 3 HET 9E7 B 8 11 HET NH2 B 13 1 HET ACE D 0 3 HET 9E7 D 8 11 HET NH2 D 13 1 HET ACE F 0 3 HET 9E7 F 8 11 HET NH2 F 13 1 HET ACE H 0 3 HET 9E7 H 8 11 HET NH2 H 13 1 HET ACE J 0 3 HET 9E7 J 8 11 HET NH2 J 13 1 HET ACE L 0 3 HET 9E7 L 8 11 HET NH2 L 13 1 HET ACE N 0 3 HET 9E7 N 8 11 HET NH2 N 13 1 HET ACE P 0 3 HET 9E7 P 8 11 HET NH2 P 13 1 HET ACE R 0 3 HET 9E7 R 8 11 HET NH2 R 13 1 HET ACE T 0 3 HET 9E7 T 8 11 HET NH2 T 13 1 HET ACE V 0 3 HET 9E7 V 8 11 HET NH2 V 13 1 HET ACE X 0 3 HET 9E7 X 8 11 HET NH2 X 13 1 HET CL C 201 1 HET CL X 101 1 HETNAM ACE ACETYL GROUP HETNAM 9E7 N~6~-(SULFANYLMETHYL)-L-LYSINE HETNAM NH2 AMINO GROUP HETNAM CL CHLORIDE ION FORMUL 2 ACE 12(C2 H4 O) FORMUL 2 9E7 12(C7 H16 N2 O2 S) FORMUL 2 NH2 12(H2 N) FORMUL 25 CL 2(CL 1-) FORMUL 27 HOH *418(H2 O) HELIX 1 AA1 LYS A 31 VAL A 41 1 11 HELIX 2 AA2 THR A 49 ARG A 65 1 17 HELIX 3 AA3 ASP A 80 GLY A 87 1 8 HELIX 4 AA4 GLU A 95 ASN A 106 1 12 HELIX 5 AA5 SER B 2 SER B 11 1 10 HELIX 6 AA6 LYS C 31 SER C 40 1 10 HELIX 7 AA7 THR C 49 ARG C 65 1 17 HELIX 8 AA8 ASP C 80 GLY C 87 1 8 HELIX 9 AA9 GLU C 95 ASN C 106 1 12 HELIX 10 AB1 SER D 2 LEU D 10 1 9 HELIX 11 AB2 LYS E 31 VAL E 41 1 11 HELIX 12 AB3 THR E 49 LYS E 64 1 16 HELIX 13 AB4 ASP E 80 GLY E 87 1 8 HELIX 14 AB5 GLU E 95 ASN E 106 1 12 HELIX 15 AB6 SER F 2 CYS F 12 1 11 HELIX 16 AB7 LYS G 31 VAL G 41 1 11 HELIX 17 AB8 THR G 49 LYS G 64 1 16 HELIX 18 AB9 ASP G 80 GLY G 87 1 8 HELIX 19 AC1 GLU G 95 ARG G 105 1 11 HELIX 20 AC2 SER H 2 CYS H 12 1 11 HELIX 21 AC3 LYS I 31 VAL I 41 1 11 HELIX 22 AC4 THR I 49 LYS I 64 1 16 HELIX 23 AC5 ASP I 80 GLY I 87 1 8 HELIX 24 AC6 GLU I 95 ASN I 106 1 12 HELIX 25 AC7 SER J 2 CYS J 12 1 11 HELIX 26 AC8 LYS K 31 VAL K 41 1 11 HELIX 27 AC9 THR K 49 ARG K 65 1 17 HELIX 28 AD1 ASP K 80 GLY K 87 1 8 HELIX 29 AD2 GLU K 95 ASN K 106 1 12 HELIX 30 AD3 SER L 2 LEU L 10 1 9 HELIX 31 AD4 LYS M 31 SER M 40 1 10 HELIX 32 AD5 THR M 49 LYS M 64 1 16 HELIX 33 AD6 ASP M 80 GLY M 87 1 8 HELIX 34 AD7 GLU M 95 ASN M 106 1 12 HELIX 35 AD8 SER N 2 SER N 11 1 10 HELIX 36 AD9 LYS O 31 SER O 40 1 10 HELIX 37 AE1 THR O 49 ARG O 65 1 17 HELIX 38 AE2 ASP O 80 GLY O 87 1 8 HELIX 39 AE3 GLU O 95 ASN O 106 1 12 HELIX 40 AE4 SER P 2 LEU P 9 1 8 HELIX 41 AE5 LYS Q 31 SER Q 40 1 10 HELIX 42 AE6 THR Q 49 LYS Q 64 1 16 HELIX 43 AE7 ASP Q 80 GLY Q 87 1 8 HELIX 44 AE8 GLU Q 95 ARG Q 105 1 11 HELIX 45 AE9 SER R 2 CYS R 12 1 11 HELIX 46 AF1 LYS S 31 VAL S 41 1 11 HELIX 47 AF2 MET S 50 LYS S 64 1 15 HELIX 48 AF3 ASP S 80 GLY S 87 1 8 HELIX 49 AF4 GLU S 95 ASN S 106 1 12 HELIX 50 AF5 SER T 2 LEU T 10 1 9 HELIX 51 AF6 LYS U 31 VAL U 41 1 11 HELIX 52 AF7 THR U 49 LYS U 64 1 16 HELIX 53 AF8 ASP U 80 GLY U 87 1 8 HELIX 54 AF9 ARG U 97 ARG U 105 1 9 HELIX 55 AG1 SER V 2 SER V 11 1 10 HELIX 56 AG2 LYS W 31 VAL W 41 1 11 HELIX 57 AG3 MET W 50 LYS W 64 1 15 HELIX 58 AG4 LEU W 81 GLY W 87 1 7 HELIX 59 AG5 GLU W 95 ARG W 105 1 11 HELIX 60 AG6 SER X 2 CYS X 12 1 11 SHEET 1 AA1 2 ARG A 29 PRO A 30 0 SHEET 2 AA1 2 LEU A 107 VAL A 108 -1 O VAL A 108 N ARG A 29 SHEET 1 AA2 2 ILE A 74 TYR A 76 0 SHEET 2 AA2 2 SER A 90 SER A 92 -1 O PHE A 91 N VAL A 75 SHEET 1 AA3 2 ARG C 29 PRO C 30 0 SHEET 2 AA3 2 LEU C 107 VAL C 108 -1 O VAL C 108 N ARG C 29 SHEET 1 AA4 2 ILE C 74 TYR C 76 0 SHEET 2 AA4 2 SER C 90 SER C 92 -1 O PHE C 91 N VAL C 75 SHEET 1 AA5 2 ILE E 74 TYR E 76 0 SHEET 2 AA5 2 SER E 90 SER E 92 -1 O PHE E 91 N VAL E 75 SHEET 1 AA6 2 ARG G 29 PRO G 30 0 SHEET 2 AA6 2 LEU G 107 VAL G 108 -1 O VAL G 108 N ARG G 29 SHEET 1 AA7 2 ILE G 74 TYR G 76 0 SHEET 2 AA7 2 SER G 90 SER G 92 -1 O PHE G 91 N VAL G 75 SHEET 1 AA8 2 ARG I 29 PRO I 30 0 SHEET 2 AA8 2 LEU I 107 VAL I 108 -1 O VAL I 108 N ARG I 29 SHEET 1 AA9 2 ILE I 74 TYR I 76 0 SHEET 2 AA9 2 SER I 90 SER I 92 -1 O PHE I 91 N VAL I 75 SHEET 1 AB1 2 ILE K 74 TYR K 76 0 SHEET 2 AB1 2 SER K 90 SER K 92 -1 O PHE K 91 N VAL K 75 SHEET 1 AB2 2 ARG M 29 PRO M 30 0 SHEET 2 AB2 2 LEU M 107 VAL M 108 -1 O VAL M 108 N ARG M 29 SHEET 1 AB3 2 ILE M 74 TYR M 76 0 SHEET 2 AB3 2 SER M 90 SER M 92 -1 O PHE M 91 N VAL M 75 SHEET 1 AB4 2 ILE O 74 TYR O 76 0 SHEET 2 AB4 2 SER O 90 SER O 92 -1 O PHE O 91 N VAL O 75 SHEET 1 AB5 2 ARG Q 29 PRO Q 30 0 SHEET 2 AB5 2 LEU Q 107 VAL Q 108 -1 O VAL Q 108 N ARG Q 29 SHEET 1 AB6 2 ILE Q 74 TYR Q 76 0 SHEET 2 AB6 2 SER Q 90 SER Q 92 -1 O PHE Q 91 N VAL Q 75 SHEET 1 AB7 2 LEU S 27 VAL S 28 0 SHEET 2 AB7 2 TYR S 48 THR S 49 -1 O TYR S 48 N VAL S 28 SHEET 1 AB8 2 ILE S 74 TYR S 76 0 SHEET 2 AB8 2 SER S 90 SER S 92 -1 O PHE S 91 N VAL S 75 SHEET 1 AB9 2 ILE U 74 TYR U 76 0 SHEET 2 AB9 2 SER U 90 SER U 92 -1 O PHE U 91 N VAL U 75 SHEET 1 AC1 2 LEU W 27 VAL W 28 0 SHEET 2 AC1 2 TYR W 48 THR W 49 -1 O TYR W 48 N VAL W 28 SHEET 1 AC2 2 ILE W 74 TYR W 76 0 SHEET 2 AC2 2 SER W 90 SER W 92 -1 O PHE W 91 N VAL W 75 LINK C ACE B 0 N THR B 1 1555 1555 1.32 LINK C TRP B 7 N 9E7 B 8 1555 1555 1.31 LINK C 9E7 B 8 N LEU B 9 1555 1555 1.32 LINK C1 9E7 B 8 SG CYS B 12 1555 1555 1.62 LINK C CYS B 12 N NH2 B 13 1555 1555 1.27 LINK C ACE D 0 N THR D 1 1555 1555 1.33 LINK C TRP D 7 N 9E7 D 8 1555 1555 1.27 LINK C 9E7 D 8 N LEU D 9 1555 1555 1.32 LINK C1 9E7 D 8 SG CYS D 12 1555 1555 1.61 LINK C CYS D 12 N NH2 D 13 1555 1555 1.29 LINK C ACE F 0 N THR F 1 1555 1555 1.33 LINK C TRP F 7 N 9E7 F 8 1555 1555 1.29 LINK C 9E7 F 8 N LEU F 9 1555 1555 1.35 LINK C1 9E7 F 8 SG CYS F 12 1555 1555 1.64 LINK C CYS F 12 N NH2 F 13 1555 1555 1.29 LINK C ACE H 0 N THR H 1 1555 1555 1.32 LINK C TRP H 7 N 9E7 H 8 1555 1555 1.27 LINK C 9E7 H 8 N LEU H 9 1555 1555 1.32 LINK C1 9E7 H 8 SG CYS H 12 1555 1555 1.64 LINK C CYS H 12 N NH2 H 13 1555 1555 1.29 LINK C ACE J 0 N THR J 1 1555 1555 1.31 LINK C TRP J 7 N 9E7 J 8 1555 1555 1.27 LINK C 9E7 J 8 N LEU J 9 1555 1555 1.31 LINK C1 9E7 J 8 SG CYS J 12 1555 1555 1.62 LINK C CYS J 12 N NH2 J 13 1555 1555 1.28 LINK C ACE L 0 N THR L 1 1555 1555 1.32 LINK C TRP L 7 N 9E7 L 8 1555 1555 1.33 LINK C 9E7 L 8 N LEU L 9 1555 1555 1.34 LINK C1 9E7 L 8 SG CYS L 12 1555 1555 1.61 LINK C CYS L 12 N NH2 L 13 1555 1555 1.28 LINK C ACE N 0 N THR N 1 1555 1555 1.32 LINK C TRP N 7 N 9E7 N 8 1555 1555 1.29 LINK C 9E7 N 8 N LEU N 9 1555 1555 1.35 LINK C1 9E7 N 8 SG CYS N 12 1555 1555 1.66 LINK C CYS N 12 N NH2 N 13 1555 1555 1.28 LINK C ACE P 0 N THR P 1 1555 1555 1.34 LINK C TRP P 7 N 9E7 P 8 1555 1555 1.26 LINK C 9E7 P 8 N LEU P 9 1555 1555 1.34 LINK C1 9E7 P 8 SG CYS P 12 1555 1555 1.65 LINK C CYS P 12 N NH2 P 13 1555 1555 1.26 LINK C ACE R 0 N THR R 1 1555 1555 1.33 LINK C TRP R 7 N 9E7 R 8 1555 1555 1.24 LINK C 9E7 R 8 N LEU R 9 1555 1555 1.33 LINK C1 9E7 R 8 SG CYS R 12 1555 1555 1.69 LINK C CYS R 12 N NH2 R 13 1555 1555 1.28 LINK C ACE T 0 N THR T 1 1555 1555 1.30 LINK C TRP T 7 N 9E7 T 8 1555 1555 1.31 LINK C 9E7 T 8 N LEU T 9 1555 1555 1.32 LINK C1 9E7 T 8 SG CYS T 12 1555 1555 1.63 LINK C CYS T 12 N NH2 T 13 1555 1555 1.27 LINK C ACE V 0 N THR V 1 1555 1555 1.33 LINK C TRP V 7 N 9E7 V 8 1555 1555 1.27 LINK C 9E7 V 8 N LEU V 9 1555 1555 1.35 LINK C1 9E7 V 8 SG CYS V 12 1555 1555 1.67 LINK C CYS V 12 N NH2 V 13 1555 1555 1.29 LINK C ACE X 0 N THR X 1 1555 1555 1.33 LINK C TRP X 7 N 9E7 X 8 1555 1555 1.28 LINK C 9E7 X 8 N LEU X 9 1555 1555 1.35 LINK C1 9E7 X 8 SG CYS X 12 1555 1555 1.67 LINK C CYS X 12 N NH2 X 13 1555 1555 1.29 SITE 1 AC1 1 LEU C 33 SITE 1 AC2 1 SER X 11 CRYST1 90.838 157.470 196.650 90.00 90.00 90.00 C 2 2 21 96 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011009 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006350 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005085 0.00000