data_5VKF # _entry.id 5VKF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VKF pdb_00005vkf 10.2210/pdb5vkf/pdb WWPDB D_1000227453 ? ? # _pdbx_database_related.content_type unspecified _pdbx_database_related.db_id 5VH0 _pdbx_database_related.db_name PDB _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VKF _pdbx_database_status.recvd_initial_deposition_date 2017-04-21 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'McDougall, M.' 1 ? 'Stetefeld, J.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 1058 _citation.page_last 1058 _citation.title 'Proteinaceous Nano container Encapsulate Polycyclic Aromatic Hydrocarbons.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41598-018-37323-x _citation.pdbx_database_id_PubMed 30705306 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'McDougall, M.' 1 ? primary 'Francisco, O.' 2 ? primary 'Harder-Viddal, C.' 3 ? primary 'Roshko, R.' 4 ? primary 'Heide, F.' 5 ? primary 'Sidhu, S.' 6 ? primary 'Khajehpour, M.' 7 ? primary 'Leslie, J.' 8 ? primary 'Palace, V.' 9 ? primary 'Tomy, G.T.' 10 ? primary 'Stetefeld, J.' 11 0000-0003-1478-3248 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5VKF _cell.details ? _cell.formula_units_Z ? _cell.length_a 110.359 _cell.length_a_esd ? _cell.length_b 110.359 _cell.length_b_esd ? _cell.length_c 70.827 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 24 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VKF _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Tetrabrachion 5898.720 4 ? ? 'UNP residues 1238-1287' ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn NAPHTHALENE 128.171 2 ? ? ? ? 4 water nat water 18.015 126 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSIINETADDIVYRLTVIIDDRYESLKNLITLRADRLEMIINDNVSTILASI _entity_poly.pdbx_seq_one_letter_code_can GSIINETADDIVYRLTVIIDDRYESLKNLITLRADRLEMIINDNVSTILASI _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ILE n 1 4 ILE n 1 5 ASN n 1 6 GLU n 1 7 THR n 1 8 ALA n 1 9 ASP n 1 10 ASP n 1 11 ILE n 1 12 VAL n 1 13 TYR n 1 14 ARG n 1 15 LEU n 1 16 THR n 1 17 VAL n 1 18 ILE n 1 19 ILE n 1 20 ASP n 1 21 ASP n 1 22 ARG n 1 23 TYR n 1 24 GLU n 1 25 SER n 1 26 LEU n 1 27 LYS n 1 28 ASN n 1 29 LEU n 1 30 ILE n 1 31 THR n 1 32 LEU n 1 33 ARG n 1 34 ALA n 1 35 ASP n 1 36 ARG n 1 37 LEU n 1 38 GLU n 1 39 MET n 1 40 ILE n 1 41 ILE n 1 42 ASN n 1 43 ASP n 1 44 ASN n 1 45 VAL n 1 46 SER n 1 47 THR n 1 48 ILE n 1 49 LEU n 1 50 ALA n 1 51 SER n 1 52 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 52 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylothermus marinus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q54436_STAMA _struct_ref.pdbx_db_accession Q54436 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code IINETADDIVYRLTVIIDDRYESLKNLITLRADRLEMIINDNVSTILASI _struct_ref.pdbx_align_begin 1238 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VKF A 3 ? 52 ? Q54436 1238 ? 1287 ? 3 52 2 1 5VKF B 3 ? 52 ? Q54436 1238 ? 1287 ? 3 52 3 1 5VKF C 3 ? 52 ? Q54436 1238 ? 1287 ? 3 52 4 1 5VKF D 3 ? 52 ? Q54436 1238 ? 1287 ? 3 52 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VKF GLY A 1 ? UNP Q54436 ? ? 'expression tag' 1 1 1 5VKF SER A 2 ? UNP Q54436 ? ? 'expression tag' 2 2 2 5VKF GLY B 1 ? UNP Q54436 ? ? 'expression tag' 1 3 2 5VKF SER B 2 ? UNP Q54436 ? ? 'expression tag' 2 4 3 5VKF GLY C 1 ? UNP Q54436 ? ? 'expression tag' 1 5 3 5VKF SER C 2 ? UNP Q54436 ? ? 'expression tag' 2 6 4 5VKF GLY D 1 ? UNP Q54436 ? ? 'expression tag' 1 7 4 5VKF SER D 2 ? UNP Q54436 ? ? 'expression tag' 2 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NPY non-polymer . NAPHTHALENE ? 'C10 H8' 128.171 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VKF _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 5.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 76.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.5M Ammonium Sulfate, 0.1M Tris pH 8.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-10-31 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5VKF _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.75 _reflns.d_resolution_low 19.12 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13074 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.1 _reflns.pdbx_Rmerge_I_obs 0.167 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 7.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.079 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.75 _reflns_shell.d_res_low 2.90 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1821 _reflns_shell.percent_possible_all 95.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.689 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.421 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.796 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VKF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.752 _refine.ls_d_res_low 19.115 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13041 _refine.ls_number_reflns_R_free 1348 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.05 _refine.ls_percent_reflns_R_free 10.34 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2032 _refine.ls_R_factor_R_free 0.2392 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1989 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1FE6 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.58 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.34 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1648 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 126 _refine_hist.number_atoms_total 1809 _refine_hist.d_res_high 2.752 _refine_hist.d_res_low 19.115 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 1746 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.355 ? 2379 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.093 ? 1080 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.034 ? 304 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.001 ? 297 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.7521 2.8502 . . 135 1087 93.00 . . . 0.3099 . 0.2652 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8502 2.9639 . . 117 1155 100.00 . . . 0.3250 . 0.2515 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9639 3.0982 . . 128 1177 100.00 . . . 0.2739 . 0.2437 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0982 3.2608 . . 135 1165 100.00 . . . 0.2988 . 0.2251 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2608 3.4640 . . 138 1163 100.00 . . . 0.2456 . 0.2056 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4640 3.7296 . . 134 1194 100.00 . . . 0.2270 . 0.1739 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7296 4.1016 . . 154 1151 100.00 . . . 0.2185 . 0.1725 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.1016 4.6874 . . 130 1184 99.00 . . . 0.1779 . 0.1535 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6874 5.8771 . . 135 1187 100.00 . . . 0.2041 . 0.1865 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.8771 19.1152 . . 142 1230 99.00 . . . 0.2577 . 0.2144 . . . . . . . . . . # _struct.entry_id 5VKF _struct.title 'RHCC in complex with Naphthalene' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VKF _struct_keywords.text 'nanotube, Polycyclic aromatic hydrocarbons, passive sample device, surface layer, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 2 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? SER A 51 ? SER A 2 SER A 51 1 ? 50 HELX_P HELX_P2 AA2 SER B 2 ? ALA B 50 ? SER B 2 ALA B 50 1 ? 49 HELX_P HELX_P3 AA3 SER C 2 ? ALA C 50 ? SER C 2 ALA C 50 1 ? 49 HELX_P HELX_P4 AA4 SER D 2 ? ALA D 50 ? SER D 2 ALA D 50 1 ? 49 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 101 ? 4 'binding site for residue SO4 B 101' AC2 Software B SO4 102 ? 3 'binding site for residue SO4 B 102' AC3 Software B NPY 103 ? 9 'binding site for residue NPY B 103' AC4 Software D SO4 101 ? 3 'binding site for residue SO4 D 101' AC5 Software D NPY 102 ? 4 'binding site for residue NPY D 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 1 ? GLY A 1 . ? 6_665 ? 2 AC1 4 HOH J . ? HOH A 107 . ? 6_665 ? 3 AC1 4 ARG B 36 ? ARG B 36 . ? 1_555 ? 4 AC1 4 HOH K . ? HOH B 205 . ? 1_555 ? 5 AC2 3 SER B 25 ? SER B 25 . ? 1_555 ? 6 AC2 3 ASN B 28 ? ASN B 28 . ? 1_555 ? 7 AC2 3 HOH K . ? HOH B 210 . ? 1_555 ? 8 AC3 9 ALA A 34 ? ALA A 34 . ? 1_555 ? 9 AC3 9 ILE B 30 ? ILE B 30 . ? 1_555 ? 10 AC3 9 ARG B 33 ? ARG B 33 . ? 1_555 ? 11 AC3 9 ILE C 30 ? ILE C 30 . ? 1_555 ? 12 AC3 9 ARG C 33 ? ARG C 33 . ? 1_555 ? 13 AC3 9 ALA C 34 ? ALA C 34 . ? 1_555 ? 14 AC3 9 ARG D 33 ? ARG D 33 . ? 1_555 ? 15 AC3 9 ALA D 34 ? ALA D 34 . ? 1_555 ? 16 AC3 9 LEU D 37 ? LEU D 37 . ? 1_555 ? 17 AC4 3 SER D 25 ? SER D 25 . ? 1_555 ? 18 AC4 3 ASN D 28 ? ASN D 28 . ? 1_555 ? 19 AC4 3 HOH M . ? HOH D 204 . ? 1_555 ? 20 AC5 4 ILE B 19 ? ILE B 19 . ? 1_555 ? 21 AC5 4 TYR B 23 ? TYR B 23 . ? 1_555 ? 22 AC5 4 ILE D 19 ? ILE D 19 . ? 1_555 ? 23 AC5 4 TYR D 23 ? TYR D 23 . ? 1_555 ? # _atom_sites.entry_id 5VKF _atom_sites.fract_transf_matrix[1][1] 0.009061 _atom_sites.fract_transf_matrix[1][2] 0.005232 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010463 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014119 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 ILE 4 4 4 ILE ILE A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ARG 22 22 22 ARG ARG A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 MET 39 39 39 MET MET A . n A 1 40 ILE 40 40 40 ILE ILE A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ALA 50 50 50 ALA ALA A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ILE 52 52 52 ILE ILE A . n B 1 1 GLY 1 1 1 GLY GLY B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 ILE 4 4 4 ILE ILE B . n B 1 5 ASN 5 5 5 ASN ASN B . n B 1 6 GLU 6 6 6 GLU GLU B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 ASP 10 10 10 ASP ASP B . n B 1 11 ILE 11 11 11 ILE ILE B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 TYR 13 13 13 TYR TYR B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 THR 16 16 16 THR THR B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 ILE 19 19 19 ILE ILE B . n B 1 20 ASP 20 20 20 ASP ASP B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 ARG 22 22 22 ARG ARG B . n B 1 23 TYR 23 23 23 TYR TYR B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 LEU 26 26 26 LEU LEU B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 ASN 28 28 28 ASN ASN B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 THR 31 31 31 THR THR B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 ARG 33 33 33 ARG ARG B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 ARG 36 36 36 ARG ARG B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 MET 39 39 39 MET MET B . n B 1 40 ILE 40 40 40 ILE ILE B . n B 1 41 ILE 41 41 41 ILE ILE B . n B 1 42 ASN 42 42 42 ASN ASN B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 VAL 45 45 45 VAL VAL B . n B 1 46 SER 46 46 46 SER SER B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 LEU 49 49 49 LEU LEU B . n B 1 50 ALA 50 50 50 ALA ALA B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 ILE 52 52 52 ILE ILE B . n C 1 1 GLY 1 1 1 GLY GLY C . n C 1 2 SER 2 2 2 SER SER C . n C 1 3 ILE 3 3 3 ILE ILE C . n C 1 4 ILE 4 4 4 ILE ILE C . n C 1 5 ASN 5 5 5 ASN ASN C . n C 1 6 GLU 6 6 6 GLU GLU C . n C 1 7 THR 7 7 7 THR THR C . n C 1 8 ALA 8 8 8 ALA ALA C . n C 1 9 ASP 9 9 9 ASP ASP C . n C 1 10 ASP 10 10 10 ASP ASP C . n C 1 11 ILE 11 11 11 ILE ILE C . n C 1 12 VAL 12 12 12 VAL VAL C . n C 1 13 TYR 13 13 13 TYR TYR C . n C 1 14 ARG 14 14 14 ARG ARG C . n C 1 15 LEU 15 15 15 LEU LEU C . n C 1 16 THR 16 16 16 THR THR C . n C 1 17 VAL 17 17 17 VAL VAL C . n C 1 18 ILE 18 18 18 ILE ILE C . n C 1 19 ILE 19 19 19 ILE ILE C . n C 1 20 ASP 20 20 20 ASP ASP C . n C 1 21 ASP 21 21 21 ASP ASP C . n C 1 22 ARG 22 22 22 ARG ARG C . n C 1 23 TYR 23 23 23 TYR TYR C . n C 1 24 GLU 24 24 24 GLU GLU C . n C 1 25 SER 25 25 25 SER SER C . n C 1 26 LEU 26 26 26 LEU LEU C . n C 1 27 LYS 27 27 27 LYS LYS C . n C 1 28 ASN 28 28 28 ASN ASN C . n C 1 29 LEU 29 29 29 LEU LEU C . n C 1 30 ILE 30 30 30 ILE ILE C . n C 1 31 THR 31 31 31 THR THR C . n C 1 32 LEU 32 32 32 LEU LEU C . n C 1 33 ARG 33 33 33 ARG ARG C . n C 1 34 ALA 34 34 34 ALA ALA C . n C 1 35 ASP 35 35 35 ASP ASP C . n C 1 36 ARG 36 36 36 ARG ARG C . n C 1 37 LEU 37 37 37 LEU LEU C . n C 1 38 GLU 38 38 38 GLU GLU C . n C 1 39 MET 39 39 39 MET MET C . n C 1 40 ILE 40 40 40 ILE ILE C . n C 1 41 ILE 41 41 41 ILE ILE C . n C 1 42 ASN 42 42 42 ASN ASN C . n C 1 43 ASP 43 43 43 ASP ASP C . n C 1 44 ASN 44 44 44 ASN ASN C . n C 1 45 VAL 45 45 45 VAL VAL C . n C 1 46 SER 46 46 46 SER SER C . n C 1 47 THR 47 47 47 THR THR C . n C 1 48 ILE 48 48 48 ILE ILE C . n C 1 49 LEU 49 49 49 LEU LEU C . n C 1 50 ALA 50 50 50 ALA ALA C . n C 1 51 SER 51 51 51 SER SER C . n C 1 52 ILE 52 52 52 ILE ILE C . n D 1 1 GLY 1 1 1 GLY GLY D . n D 1 2 SER 2 2 2 SER SER D . n D 1 3 ILE 3 3 3 ILE ILE D . n D 1 4 ILE 4 4 4 ILE ILE D . n D 1 5 ASN 5 5 5 ASN ASN D . n D 1 6 GLU 6 6 6 GLU GLU D . n D 1 7 THR 7 7 7 THR THR D . n D 1 8 ALA 8 8 8 ALA ALA D . n D 1 9 ASP 9 9 9 ASP ASP D . n D 1 10 ASP 10 10 10 ASP ASP D . n D 1 11 ILE 11 11 11 ILE ILE D . n D 1 12 VAL 12 12 12 VAL VAL D . n D 1 13 TYR 13 13 13 TYR TYR D . n D 1 14 ARG 14 14 14 ARG ARG D . n D 1 15 LEU 15 15 15 LEU LEU D . n D 1 16 THR 16 16 16 THR THR D . n D 1 17 VAL 17 17 17 VAL VAL D . n D 1 18 ILE 18 18 18 ILE ILE D . n D 1 19 ILE 19 19 19 ILE ILE D . n D 1 20 ASP 20 20 20 ASP ASP D . n D 1 21 ASP 21 21 21 ASP ASP D . n D 1 22 ARG 22 22 22 ARG ARG D . n D 1 23 TYR 23 23 23 TYR TYR D . n D 1 24 GLU 24 24 24 GLU GLU D . n D 1 25 SER 25 25 25 SER SER D . n D 1 26 LEU 26 26 26 LEU LEU D . n D 1 27 LYS 27 27 27 LYS LYS D . n D 1 28 ASN 28 28 28 ASN ASN D . n D 1 29 LEU 29 29 29 LEU LEU D . n D 1 30 ILE 30 30 30 ILE ILE D . n D 1 31 THR 31 31 31 THR THR D . n D 1 32 LEU 32 32 32 LEU LEU D . n D 1 33 ARG 33 33 33 ARG ARG D . n D 1 34 ALA 34 34 34 ALA ALA D . n D 1 35 ASP 35 35 35 ASP ASP D . n D 1 36 ARG 36 36 36 ARG ARG D . n D 1 37 LEU 37 37 37 LEU LEU D . n D 1 38 GLU 38 38 38 GLU GLU D . n D 1 39 MET 39 39 39 MET MET D . n D 1 40 ILE 40 40 40 ILE ILE D . n D 1 41 ILE 41 41 41 ILE ILE D . n D 1 42 ASN 42 42 42 ASN ASN D . n D 1 43 ASP 43 43 43 ASP ASP D . n D 1 44 ASN 44 44 44 ASN ASN D . n D 1 45 VAL 45 45 45 VAL VAL D . n D 1 46 SER 46 46 46 SER SER D . n D 1 47 THR 47 47 47 THR THR D . n D 1 48 ILE 48 48 48 ILE ILE D . n D 1 49 LEU 49 49 49 LEU LEU D . n D 1 50 ALA 50 50 50 ALA ALA D . n D 1 51 SER 51 51 51 SER SER D . n D 1 52 ILE 52 52 52 ILE ILE D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 1 101 1 SO4 SO4 B . F 2 SO4 1 102 2 SO4 SO4 B . G 3 NPY 1 103 1 NPY NPY B . H 2 SO4 1 101 3 SO4 SO4 D . I 3 NPY 1 102 1 NPY NPY D . J 4 HOH 1 101 35 HOH HOH A . J 4 HOH 2 102 90 HOH HOH A . J 4 HOH 3 103 16 HOH HOH A . J 4 HOH 4 104 41 HOH HOH A . J 4 HOH 5 105 8 HOH HOH A . J 4 HOH 6 106 98 HOH HOH A . J 4 HOH 7 107 104 HOH HOH A . J 4 HOH 8 108 91 HOH HOH A . J 4 HOH 9 109 112 HOH HOH A . J 4 HOH 10 110 55 HOH HOH A . J 4 HOH 11 111 86 HOH HOH A . J 4 HOH 12 112 19 HOH HOH A . J 4 HOH 13 113 110 HOH HOH A . J 4 HOH 14 114 70 HOH HOH A . J 4 HOH 15 115 82 HOH HOH A . J 4 HOH 16 116 53 HOH HOH A . J 4 HOH 17 117 94 HOH HOH A . J 4 HOH 18 118 44 HOH HOH A . J 4 HOH 19 119 116 HOH HOH A . J 4 HOH 20 120 24 HOH HOH A . J 4 HOH 21 121 81 HOH HOH A . J 4 HOH 22 122 21 HOH HOH A . J 4 HOH 23 123 125 HOH HOH A . J 4 HOH 24 124 12 HOH HOH A . J 4 HOH 25 125 95 HOH HOH A . J 4 HOH 26 126 31 HOH HOH A . J 4 HOH 27 127 124 HOH HOH A . J 4 HOH 28 128 108 HOH HOH A . J 4 HOH 29 129 106 HOH HOH A . J 4 HOH 30 130 51 HOH HOH A . K 4 HOH 1 201 43 HOH HOH B . K 4 HOH 2 202 38 HOH HOH B . K 4 HOH 3 203 129 HOH HOH B . K 4 HOH 4 204 58 HOH HOH B . K 4 HOH 5 205 85 HOH HOH B . K 4 HOH 6 206 128 HOH HOH B . K 4 HOH 7 207 65 HOH HOH B . K 4 HOH 8 208 22 HOH HOH B . K 4 HOH 9 209 59 HOH HOH B . K 4 HOH 10 210 4 HOH HOH B . K 4 HOH 11 211 7 HOH HOH B . K 4 HOH 12 212 52 HOH HOH B . K 4 HOH 13 213 97 HOH HOH B . K 4 HOH 14 214 9 HOH HOH B . K 4 HOH 15 215 13 HOH HOH B . K 4 HOH 16 216 1 HOH HOH B . K 4 HOH 17 217 54 HOH HOH B . K 4 HOH 18 218 102 HOH HOH B . K 4 HOH 19 219 111 HOH HOH B . K 4 HOH 20 220 105 HOH HOH B . K 4 HOH 21 221 109 HOH HOH B . K 4 HOH 22 222 17 HOH HOH B . K 4 HOH 23 223 127 HOH HOH B . K 4 HOH 24 224 18 HOH HOH B . K 4 HOH 25 225 101 HOH HOH B . K 4 HOH 26 226 76 HOH HOH B . K 4 HOH 27 227 123 HOH HOH B . K 4 HOH 28 228 34 HOH HOH B . K 4 HOH 29 229 88 HOH HOH B . K 4 HOH 30 230 61 HOH HOH B . K 4 HOH 31 231 92 HOH HOH B . K 4 HOH 32 232 62 HOH HOH B . K 4 HOH 33 233 126 HOH HOH B . K 4 HOH 34 234 117 HOH HOH B . K 4 HOH 35 235 56 HOH HOH B . K 4 HOH 36 236 121 HOH HOH B . K 4 HOH 37 237 131 HOH HOH B . L 4 HOH 1 101 10 HOH HOH C . L 4 HOH 2 102 25 HOH HOH C . L 4 HOH 3 103 26 HOH HOH C . L 4 HOH 4 104 119 HOH HOH C . L 4 HOH 5 105 83 HOH HOH C . L 4 HOH 6 106 11 HOH HOH C . L 4 HOH 7 107 23 HOH HOH C . L 4 HOH 8 108 39 HOH HOH C . L 4 HOH 9 109 72 HOH HOH C . L 4 HOH 10 110 20 HOH HOH C . L 4 HOH 11 111 120 HOH HOH C . L 4 HOH 12 112 96 HOH HOH C . L 4 HOH 13 113 66 HOH HOH C . L 4 HOH 14 114 78 HOH HOH C . L 4 HOH 15 115 100 HOH HOH C . L 4 HOH 16 116 71 HOH HOH C . L 4 HOH 17 117 36 HOH HOH C . L 4 HOH 18 118 74 HOH HOH C . L 4 HOH 19 119 73 HOH HOH C . L 4 HOH 20 120 122 HOH HOH C . L 4 HOH 21 121 67 HOH HOH C . L 4 HOH 22 122 30 HOH HOH C . L 4 HOH 23 123 113 HOH HOH C . L 4 HOH 24 124 45 HOH HOH C . M 4 HOH 1 201 99 HOH HOH D . M 4 HOH 2 202 80 HOH HOH D . M 4 HOH 3 203 37 HOH HOH D . M 4 HOH 4 204 40 HOH HOH D . M 4 HOH 5 205 6 HOH HOH D . M 4 HOH 6 206 15 HOH HOH D . M 4 HOH 7 207 93 HOH HOH D . M 4 HOH 8 208 89 HOH HOH D . M 4 HOH 9 209 57 HOH HOH D . M 4 HOH 10 210 47 HOH HOH D . M 4 HOH 11 211 32 HOH HOH D . M 4 HOH 12 212 3 HOH HOH D . M 4 HOH 13 213 33 HOH HOH D . M 4 HOH 14 214 46 HOH HOH D . M 4 HOH 15 215 79 HOH HOH D . M 4 HOH 16 216 42 HOH HOH D . M 4 HOH 17 217 84 HOH HOH D . M 4 HOH 18 218 50 HOH HOH D . M 4 HOH 19 219 29 HOH HOH D . M 4 HOH 20 220 103 HOH HOH D . M 4 HOH 21 221 115 HOH HOH D . M 4 HOH 22 222 118 HOH HOH D . M 4 HOH 23 223 14 HOH HOH D . M 4 HOH 24 224 27 HOH HOH D . M 4 HOH 25 225 107 HOH HOH D . M 4 HOH 26 226 68 HOH HOH D . M 4 HOH 27 227 48 HOH HOH D . M 4 HOH 28 228 87 HOH HOH D . M 4 HOH 29 229 114 HOH HOH D . M 4 HOH 30 230 28 HOH HOH D . M 4 HOH 31 231 49 HOH HOH D . M 4 HOH 32 232 69 HOH HOH D . M 4 HOH 33 233 75 HOH HOH D . M 4 HOH 34 234 63 HOH HOH D . M 4 HOH 35 235 130 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8630 ? 1 MORE -81 ? 1 'SSA (A^2)' 11220 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-04-25 2 'Structure model' 1 1 2019-11-06 3 'Structure model' 1 2 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' 12 3 'Structure model' '_database_2.pdbx_DOI' 13 3 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 52.4160 21.7346 7.8532 0.2348 0.3057 0.2552 -0.0099 -0.0215 0.0063 0.4179 2.8691 0.5426 0.4098 -0.3331 -1.1562 -0.1801 0.0698 -0.0502 -0.5597 0.1851 -0.4101 0.0869 0.1211 -0.0563 'X-RAY DIFFRACTION' 2 ? refined 41.9569 24.2914 7.5772 0.2762 0.3403 0.1918 0.0055 -0.0493 0.0428 3.0116 6.5902 0.7942 3.8483 0.6239 0.2441 -0.1826 0.0781 0.1481 -0.8463 0.2952 0.8816 0.0014 -0.1750 -0.1933 'X-RAY DIFFRACTION' 3 ? refined 41.8254 24.6088 18.2528 0.2122 0.2878 0.2521 0.0552 -0.0311 -0.0074 0.5375 7.7396 1.2764 0.3540 -0.4522 -0.5178 0.0585 -0.2086 0.0897 0.7282 -0.0770 0.7051 0.0447 -0.0441 -0.0233 'X-RAY DIFFRACTION' 4 ? refined 51.8782 21.1615 18.4427 0.2082 0.2685 0.2295 0.0537 -0.0429 0.0196 1.4045 7.6146 1.3871 2.2111 0.0882 -0.7247 0.0811 -0.0338 -0.0407 0.5791 0.0201 -0.1985 -0.0391 0.2375 -0.0842 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;(chain 'A' and resid 1 through 52) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;(chain 'B' and resid 1 through 52) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;(chain 'C' and resid 1 through 52) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;(chain 'D' and resid 1 through 52) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.11.1-2575_2575 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OD1 B ASP 21 ? B O B HOH 201 ? ? 2.06 2 1 OD1 D ASP 21 ? A O D HOH 201 ? ? 2.12 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 214 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 D _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 207 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 6_665 _pdbx_validate_symm_contact.dist 2.02 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER B 2 ? ? -128.57 -168.22 2 1 SER B 51 ? ? -110.84 56.39 3 1 SER D 51 ? ? -113.76 51.92 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 130 ? 6.02 . 2 1 O ? B HOH 237 ? 5.85 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLU N N N N 74 GLU CA C N S 75 GLU C C N N 76 GLU O O N N 77 GLU CB C N N 78 GLU CG C N N 79 GLU CD C N N 80 GLU OE1 O N N 81 GLU OE2 O N N 82 GLU OXT O N N 83 GLU H H N N 84 GLU H2 H N N 85 GLU HA H N N 86 GLU HB2 H N N 87 GLU HB3 H N N 88 GLU HG2 H N N 89 GLU HG3 H N N 90 GLU HE2 H N N 91 GLU HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HOH O O N N 103 HOH H1 H N N 104 HOH H2 H N N 105 ILE N N N N 106 ILE CA C N S 107 ILE C C N N 108 ILE O O N N 109 ILE CB C N S 110 ILE CG1 C N N 111 ILE CG2 C N N 112 ILE CD1 C N N 113 ILE OXT O N N 114 ILE H H N N 115 ILE H2 H N N 116 ILE HA H N N 117 ILE HB H N N 118 ILE HG12 H N N 119 ILE HG13 H N N 120 ILE HG21 H N N 121 ILE HG22 H N N 122 ILE HG23 H N N 123 ILE HD11 H N N 124 ILE HD12 H N N 125 ILE HD13 H N N 126 ILE HXT H N N 127 LEU N N N N 128 LEU CA C N S 129 LEU C C N N 130 LEU O O N N 131 LEU CB C N N 132 LEU CG C N N 133 LEU CD1 C N N 134 LEU CD2 C N N 135 LEU OXT O N N 136 LEU H H N N 137 LEU H2 H N N 138 LEU HA H N N 139 LEU HB2 H N N 140 LEU HB3 H N N 141 LEU HG H N N 142 LEU HD11 H N N 143 LEU HD12 H N N 144 LEU HD13 H N N 145 LEU HD21 H N N 146 LEU HD22 H N N 147 LEU HD23 H N N 148 LEU HXT H N N 149 LYS N N N N 150 LYS CA C N S 151 LYS C C N N 152 LYS O O N N 153 LYS CB C N N 154 LYS CG C N N 155 LYS CD C N N 156 LYS CE C N N 157 LYS NZ N N N 158 LYS OXT O N N 159 LYS H H N N 160 LYS H2 H N N 161 LYS HA H N N 162 LYS HB2 H N N 163 LYS HB3 H N N 164 LYS HG2 H N N 165 LYS HG3 H N N 166 LYS HD2 H N N 167 LYS HD3 H N N 168 LYS HE2 H N N 169 LYS HE3 H N N 170 LYS HZ1 H N N 171 LYS HZ2 H N N 172 LYS HZ3 H N N 173 LYS HXT H N N 174 MET N N N N 175 MET CA C N S 176 MET C C N N 177 MET O O N N 178 MET CB C N N 179 MET CG C N N 180 MET SD S N N 181 MET CE C N N 182 MET OXT O N N 183 MET H H N N 184 MET H2 H N N 185 MET HA H N N 186 MET HB2 H N N 187 MET HB3 H N N 188 MET HG2 H N N 189 MET HG3 H N N 190 MET HE1 H N N 191 MET HE2 H N N 192 MET HE3 H N N 193 MET HXT H N N 194 NPY C1 C Y N 195 NPY C2 C Y N 196 NPY C3 C Y N 197 NPY C4 C Y N 198 NPY C4A C Y N 199 NPY C5 C Y N 200 NPY C6 C Y N 201 NPY C7 C Y N 202 NPY C8 C Y N 203 NPY C8A C Y N 204 NPY H11 H N N 205 NPY H2 H N N 206 NPY H3 H N N 207 NPY H4 H N N 208 NPY H5 H N N 209 NPY H6 H N N 210 NPY H7 H N N 211 NPY H8 H N N 212 SER N N N N 213 SER CA C N S 214 SER C C N N 215 SER O O N N 216 SER CB C N N 217 SER OG O N N 218 SER OXT O N N 219 SER H H N N 220 SER H2 H N N 221 SER HA H N N 222 SER HB2 H N N 223 SER HB3 H N N 224 SER HG H N N 225 SER HXT H N N 226 SO4 S S N N 227 SO4 O1 O N N 228 SO4 O2 O N N 229 SO4 O3 O N N 230 SO4 O4 O N N 231 THR N N N N 232 THR CA C N S 233 THR C C N N 234 THR O O N N 235 THR CB C N R 236 THR OG1 O N N 237 THR CG2 C N N 238 THR OXT O N N 239 THR H H N N 240 THR H2 H N N 241 THR HA H N N 242 THR HB H N N 243 THR HG1 H N N 244 THR HG21 H N N 245 THR HG22 H N N 246 THR HG23 H N N 247 THR HXT H N N 248 TYR N N N N 249 TYR CA C N S 250 TYR C C N N 251 TYR O O N N 252 TYR CB C N N 253 TYR CG C Y N 254 TYR CD1 C Y N 255 TYR CD2 C Y N 256 TYR CE1 C Y N 257 TYR CE2 C Y N 258 TYR CZ C Y N 259 TYR OH O N N 260 TYR OXT O N N 261 TYR H H N N 262 TYR H2 H N N 263 TYR HA H N N 264 TYR HB2 H N N 265 TYR HB3 H N N 266 TYR HD1 H N N 267 TYR HD2 H N N 268 TYR HE1 H N N 269 TYR HE2 H N N 270 TYR HH H N N 271 TYR HXT H N N 272 VAL N N N N 273 VAL CA C N S 274 VAL C C N N 275 VAL O O N N 276 VAL CB C N N 277 VAL CG1 C N N 278 VAL CG2 C N N 279 VAL OXT O N N 280 VAL H H N N 281 VAL H2 H N N 282 VAL HA H N N 283 VAL HB H N N 284 VAL HG11 H N N 285 VAL HG12 H N N 286 VAL HG13 H N N 287 VAL HG21 H N N 288 VAL HG22 H N N 289 VAL HG23 H N N 290 VAL HXT H N N 291 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLU N CA sing N N 70 GLU N H sing N N 71 GLU N H2 sing N N 72 GLU CA C sing N N 73 GLU CA CB sing N N 74 GLU CA HA sing N N 75 GLU C O doub N N 76 GLU C OXT sing N N 77 GLU CB CG sing N N 78 GLU CB HB2 sing N N 79 GLU CB HB3 sing N N 80 GLU CG CD sing N N 81 GLU CG HG2 sing N N 82 GLU CG HG3 sing N N 83 GLU CD OE1 doub N N 84 GLU CD OE2 sing N N 85 GLU OE2 HE2 sing N N 86 GLU OXT HXT sing N N 87 GLY N CA sing N N 88 GLY N H sing N N 89 GLY N H2 sing N N 90 GLY CA C sing N N 91 GLY CA HA2 sing N N 92 GLY CA HA3 sing N N 93 GLY C O doub N N 94 GLY C OXT sing N N 95 GLY OXT HXT sing N N 96 HOH O H1 sing N N 97 HOH O H2 sing N N 98 ILE N CA sing N N 99 ILE N H sing N N 100 ILE N H2 sing N N 101 ILE CA C sing N N 102 ILE CA CB sing N N 103 ILE CA HA sing N N 104 ILE C O doub N N 105 ILE C OXT sing N N 106 ILE CB CG1 sing N N 107 ILE CB CG2 sing N N 108 ILE CB HB sing N N 109 ILE CG1 CD1 sing N N 110 ILE CG1 HG12 sing N N 111 ILE CG1 HG13 sing N N 112 ILE CG2 HG21 sing N N 113 ILE CG2 HG22 sing N N 114 ILE CG2 HG23 sing N N 115 ILE CD1 HD11 sing N N 116 ILE CD1 HD12 sing N N 117 ILE CD1 HD13 sing N N 118 ILE OXT HXT sing N N 119 LEU N CA sing N N 120 LEU N H sing N N 121 LEU N H2 sing N N 122 LEU CA C sing N N 123 LEU CA CB sing N N 124 LEU CA HA sing N N 125 LEU C O doub N N 126 LEU C OXT sing N N 127 LEU CB CG sing N N 128 LEU CB HB2 sing N N 129 LEU CB HB3 sing N N 130 LEU CG CD1 sing N N 131 LEU CG CD2 sing N N 132 LEU CG HG sing N N 133 LEU CD1 HD11 sing N N 134 LEU CD1 HD12 sing N N 135 LEU CD1 HD13 sing N N 136 LEU CD2 HD21 sing N N 137 LEU CD2 HD22 sing N N 138 LEU CD2 HD23 sing N N 139 LEU OXT HXT sing N N 140 LYS N CA sing N N 141 LYS N H sing N N 142 LYS N H2 sing N N 143 LYS CA C sing N N 144 LYS CA CB sing N N 145 LYS CA HA sing N N 146 LYS C O doub N N 147 LYS C OXT sing N N 148 LYS CB CG sing N N 149 LYS CB HB2 sing N N 150 LYS CB HB3 sing N N 151 LYS CG CD sing N N 152 LYS CG HG2 sing N N 153 LYS CG HG3 sing N N 154 LYS CD CE sing N N 155 LYS CD HD2 sing N N 156 LYS CD HD3 sing N N 157 LYS CE NZ sing N N 158 LYS CE HE2 sing N N 159 LYS CE HE3 sing N N 160 LYS NZ HZ1 sing N N 161 LYS NZ HZ2 sing N N 162 LYS NZ HZ3 sing N N 163 LYS OXT HXT sing N N 164 MET N CA sing N N 165 MET N H sing N N 166 MET N H2 sing N N 167 MET CA C sing N N 168 MET CA CB sing N N 169 MET CA HA sing N N 170 MET C O doub N N 171 MET C OXT sing N N 172 MET CB CG sing N N 173 MET CB HB2 sing N N 174 MET CB HB3 sing N N 175 MET CG SD sing N N 176 MET CG HG2 sing N N 177 MET CG HG3 sing N N 178 MET SD CE sing N N 179 MET CE HE1 sing N N 180 MET CE HE2 sing N N 181 MET CE HE3 sing N N 182 MET OXT HXT sing N N 183 NPY C1 C2 doub Y N 184 NPY C1 C8A sing Y N 185 NPY C1 H11 sing N N 186 NPY C2 C3 sing Y N 187 NPY C2 H2 sing N N 188 NPY C3 C4 doub Y N 189 NPY C3 H3 sing N N 190 NPY C4 C4A sing Y N 191 NPY C4 H4 sing N N 192 NPY C4A C5 sing Y N 193 NPY C4A C8A doub Y N 194 NPY C5 C6 doub Y N 195 NPY C5 H5 sing N N 196 NPY C6 C7 sing Y N 197 NPY C6 H6 sing N N 198 NPY C7 C8 doub Y N 199 NPY C7 H7 sing N N 200 NPY C8 C8A sing Y N 201 NPY C8 H8 sing N N 202 SER N CA sing N N 203 SER N H sing N N 204 SER N H2 sing N N 205 SER CA C sing N N 206 SER CA CB sing N N 207 SER CA HA sing N N 208 SER C O doub N N 209 SER C OXT sing N N 210 SER CB OG sing N N 211 SER CB HB2 sing N N 212 SER CB HB3 sing N N 213 SER OG HG sing N N 214 SER OXT HXT sing N N 215 SO4 S O1 doub N N 216 SO4 S O2 doub N N 217 SO4 S O3 sing N N 218 SO4 S O4 sing N N 219 THR N CA sing N N 220 THR N H sing N N 221 THR N H2 sing N N 222 THR CA C sing N N 223 THR CA CB sing N N 224 THR CA HA sing N N 225 THR C O doub N N 226 THR C OXT sing N N 227 THR CB OG1 sing N N 228 THR CB CG2 sing N N 229 THR CB HB sing N N 230 THR OG1 HG1 sing N N 231 THR CG2 HG21 sing N N 232 THR CG2 HG22 sing N N 233 THR CG2 HG23 sing N N 234 THR OXT HXT sing N N 235 TYR N CA sing N N 236 TYR N H sing N N 237 TYR N H2 sing N N 238 TYR CA C sing N N 239 TYR CA CB sing N N 240 TYR CA HA sing N N 241 TYR C O doub N N 242 TYR C OXT sing N N 243 TYR CB CG sing N N 244 TYR CB HB2 sing N N 245 TYR CB HB3 sing N N 246 TYR CG CD1 doub Y N 247 TYR CG CD2 sing Y N 248 TYR CD1 CE1 sing Y N 249 TYR CD1 HD1 sing N N 250 TYR CD2 CE2 doub Y N 251 TYR CD2 HD2 sing N N 252 TYR CE1 CZ doub Y N 253 TYR CE1 HE1 sing N N 254 TYR CE2 CZ sing Y N 255 TYR CE2 HE2 sing N N 256 TYR CZ OH sing N N 257 TYR OH HH sing N N 258 TYR OXT HXT sing N N 259 VAL N CA sing N N 260 VAL N H sing N N 261 VAL N H2 sing N N 262 VAL CA C sing N N 263 VAL CA CB sing N N 264 VAL CA HA sing N N 265 VAL C O doub N N 266 VAL C OXT sing N N 267 VAL CB CG1 sing N N 268 VAL CB CG2 sing N N 269 VAL CB HB sing N N 270 VAL CG1 HG11 sing N N 271 VAL CG1 HG12 sing N N 272 VAL CG1 HG13 sing N N 273 VAL CG2 HG21 sing N N 274 VAL CG2 HG22 sing N N 275 VAL CG2 HG23 sing N N 276 VAL OXT HXT sing N N 277 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Natural Sciences and Engineering Research Council of Canada- Discovery Grants' Canada RGPIN-342077-2012 1 'Natural Sciences and Engineering Research Council of Canada- Strategic Partnership Grants' Canada STGP-479210-2015 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 NAPHTHALENE NPY 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1FE6 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #