HEADER VIRAL PROTEIN 27-APR-17 5VMF TITLE INFLUENZA HEMAGGLUTININ H1 MUTANT DH1D IN COMPLEX WITH 6'SLN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ HA1; COMPND 3 CHAIN: A, C, E; COMPND 4 FRAGMENT: DEL133/Q226L/G228S; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: HEMAGGLUTININ HA2; COMPND 8 CHAIN: B, D, F; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/BREVIG SOURCE 3 MISSION/1/1918 H1N1); SOURCE 4 ORGANISM_TAXID: 88776; SOURCE 5 STRAIN: A/BREVIG MISSION/1/1918 H1N1; SOURCE 6 GENE: HA; SOURCE 7 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 10469; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (STRAIN A/BREVIG SOURCE 11 MISSION/1/1918 H1N1); SOURCE 12 ORGANISM_TAXID: 88776; SOURCE 13 STRAIN: A/BREVIG MISSION/1/1918 H1N1; SOURCE 14 GENE: HA; SOURCE 15 EXPRESSION_SYSTEM: UNIDENTIFIED BACULOVIRUS; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 10469 KEYWDS INFLUENZA, HEMAGGLUTININ, RECEPTOR, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.NI,E.KONDRASHKINA,Q.WANG REVDAT 4 04-OCT-23 5VMF 1 REMARK REVDAT 3 23-MAR-22 5VMF 1 HETSYN LINK REVDAT 2 29-JUL-20 5VMF 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 08-NOV-17 5VMF 0 JRNL AUTH F.NI,E.KONDRASHKINA,Q.WANG JRNL TITL DETERMINANT OF RECEPTOR-PREFERENCE SWITCH IN INFLUENZA JRNL TITL 2 HEMAGGLUTININ. JRNL REF VIROLOGY V. 513 98 2017 JRNL REFN ISSN 1096-0341 JRNL PMID 29055255 JRNL DOI 10.1016/J.VIROL.2017.10.010 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.88 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 76761 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8870 - 7.1269 1.00 2684 166 0.2038 0.2513 REMARK 3 2 7.1269 - 5.6604 1.00 2656 129 0.1922 0.2585 REMARK 3 3 5.6604 - 4.9459 1.00 2647 145 0.1622 0.1918 REMARK 3 4 4.9459 - 4.4942 1.00 2621 119 0.1548 0.1857 REMARK 3 5 4.4942 - 4.1723 1.00 2598 146 0.1555 0.2124 REMARK 3 6 4.1723 - 3.9264 1.00 2612 149 0.1678 0.1993 REMARK 3 7 3.9264 - 3.7299 1.00 2625 138 0.1770 0.2349 REMARK 3 8 3.7299 - 3.5676 1.00 2574 158 0.1792 0.2184 REMARK 3 9 3.5676 - 3.4303 1.00 2661 114 0.1833 0.1767 REMARK 3 10 3.4303 - 3.3120 1.00 2579 131 0.1890 0.2302 REMARK 3 11 3.3120 - 3.2085 1.00 2579 135 0.1984 0.2422 REMARK 3 12 3.2085 - 3.1168 1.00 2621 142 0.2005 0.2206 REMARK 3 13 3.1168 - 3.0347 1.00 2593 140 0.2056 0.2474 REMARK 3 14 3.0347 - 2.9607 1.00 2593 128 0.2119 0.2363 REMARK 3 15 2.9607 - 2.8934 1.00 2601 161 0.2083 0.2496 REMARK 3 16 2.8934 - 2.8318 1.00 2576 130 0.2177 0.2652 REMARK 3 17 2.8318 - 2.7752 1.00 2586 148 0.2168 0.2584 REMARK 3 18 2.7752 - 2.7228 1.00 2597 140 0.2248 0.2678 REMARK 3 19 2.7228 - 2.6742 1.00 2598 135 0.2173 0.2926 REMARK 3 20 2.6742 - 2.6289 1.00 2610 134 0.2222 0.2609 REMARK 3 21 2.6289 - 2.5865 1.00 2556 135 0.2195 0.2267 REMARK 3 22 2.5865 - 2.5467 1.00 2586 130 0.2222 0.2922 REMARK 3 23 2.5467 - 2.5093 1.00 2595 137 0.2189 0.2582 REMARK 3 24 2.5093 - 2.4739 1.00 2624 117 0.2185 0.2477 REMARK 3 25 2.4739 - 2.4405 1.00 2564 157 0.2158 0.2335 REMARK 3 26 2.4405 - 2.4088 1.00 2578 125 0.2220 0.2354 REMARK 3 27 2.4088 - 2.3787 1.00 2627 130 0.2259 0.2753 REMARK 3 28 2.3787 - 2.3500 1.00 2566 135 0.2231 0.2622 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 11953 REMARK 3 ANGLE : 0.987 16222 REMARK 3 CHIRALITY : 0.041 1796 REMARK 3 PLANARITY : 0.004 2083 REMARK 3 DIHEDRAL : 11.732 4276 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-17. REMARK 100 THE DEPOSITION ID IS D_1000227669. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11130 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 54.470 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2WRG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.20 M NAF, 19% PEG3350, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.13000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56210 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -113.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G, H, I, J, REMARK 350 AND CHAINS: K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 322 REMARK 465 ILE A 323 REMARK 465 GLN A 324 REMARK 465 SER A 325 REMARK 465 ARG A 326 REMARK 465 GLU B 165 REMARK 465 SER B 166 REMARK 465 LYS B 167 REMARK 465 LEU B 168 REMARK 465 ASN B 169 REMARK 465 ARG B 170 REMARK 465 GLU B 171 REMARK 465 GLU B 172 REMARK 465 ILE B 173 REMARK 465 ASP B 174 REMARK 465 GLY B 175 REMARK 465 VAL B 176 REMARK 465 LYS B 177 REMARK 465 LEU B 178 REMARK 465 GLU B 179 REMARK 465 SER B 180 REMARK 465 MET B 181 REMARK 465 GLY B 182 REMARK 465 VAL B 183 REMARK 465 TYR B 184 REMARK 465 GLN B 185 REMARK 465 GLY B 186 REMARK 465 ALA B 187 REMARK 465 LEU B 188 REMARK 465 VAL B 189 REMARK 465 PRO B 190 REMARK 465 ARG B 191 REMARK 465 SER C 322 REMARK 465 ILE C 323 REMARK 465 GLN C 324 REMARK 465 SER C 325 REMARK 465 ARG C 326 REMARK 465 GLU D 165 REMARK 465 SER D 166 REMARK 465 LYS D 167 REMARK 465 LEU D 168 REMARK 465 ASN D 169 REMARK 465 ARG D 170 REMARK 465 GLU D 171 REMARK 465 GLU D 172 REMARK 465 ILE D 173 REMARK 465 ASP D 174 REMARK 465 GLY D 175 REMARK 465 VAL D 176 REMARK 465 LYS D 177 REMARK 465 LEU D 178 REMARK 465 GLU D 179 REMARK 465 SER D 180 REMARK 465 MET D 181 REMARK 465 GLY D 182 REMARK 465 VAL D 183 REMARK 465 TYR D 184 REMARK 465 GLN D 185 REMARK 465 GLY D 186 REMARK 465 ALA D 187 REMARK 465 LEU D 188 REMARK 465 VAL D 189 REMARK 465 PRO D 190 REMARK 465 ARG D 191 REMARK 465 SER E 322 REMARK 465 ILE E 323 REMARK 465 GLN E 324 REMARK 465 SER E 325 REMARK 465 ARG E 326 REMARK 465 GLU F 165 REMARK 465 SER F 166 REMARK 465 LYS F 167 REMARK 465 LEU F 168 REMARK 465 ASN F 169 REMARK 465 ARG F 170 REMARK 465 GLU F 171 REMARK 465 GLU F 172 REMARK 465 ILE F 173 REMARK 465 ASP F 174 REMARK 465 GLY F 175 REMARK 465 VAL F 176 REMARK 465 LYS F 177 REMARK 465 LEU F 178 REMARK 465 GLU F 179 REMARK 465 SER F 180 REMARK 465 MET F 181 REMARK 465 GLY F 182 REMARK 465 VAL F 183 REMARK 465 TYR F 184 REMARK 465 GLN F 185 REMARK 465 GLY F 186 REMARK 465 ALA F 187 REMARK 465 LEU F 188 REMARK 465 VAL F 189 REMARK 465 PRO F 190 REMARK 465 ARG F 191 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 68 CG OD1 OD2 REMARK 470 LEU A 69 CG CD1 CD2 REMARK 470 LEU A 70 CG CD1 CD2 REMARK 470 THR A 72 OG1 CG2 REMARK 470 ASP C 68 CG OD1 OD2 REMARK 470 LEU C 69 CG CD1 CD2 REMARK 470 LEU C 70 CG CD1 CD2 REMARK 470 LEU C 71 CG CD1 CD2 REMARK 470 THR C 72 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE1 TRP F 92 O HOH F 205 1.45 REMARK 500 HZ1 LYS F 127 O HOH F 207 1.46 REMARK 500 HE21 GLN F 62 O HOH F 202 1.49 REMARK 500 H1 ASP A 1 O HOH A 1101 1.50 REMARK 500 HH21 ARG A 145 O HOH A 1112 1.51 REMARK 500 OD1 ASN F 128 HH TYR F 159 1.52 REMARK 500 HH TYR A 229 O HOH A 1113 1.57 REMARK 500 HE ARG E 318 O HOH E 1123 1.57 REMARK 500 HE21 GLN E 51 O HOH E 1116 1.57 REMARK 500 O PHE B 3 HE ARG B 116 1.59 REMARK 500 H GLY F 16 O HOH F 209 1.60 REMARK 500 O HOH C 1148 O HOH C 1252 1.80 REMARK 500 O HOH A 1264 O HOH B 221 1.84 REMARK 500 O HOH C 1278 O HOH E 1229 1.86 REMARK 500 O6 GAL K 2 O6 SIA K 3 1.86 REMARK 500 O HOH E 1185 O HOH E 1317 1.88 REMARK 500 N ASP A 1 O HOH A 1101 1.93 REMARK 500 O HOH F 238 O HOH F 283 1.94 REMARK 500 O HOH B 256 O HOH B 261 1.95 REMARK 500 O LEU A 69 O HOH A 1102 1.96 REMARK 500 ND2 ASN E 286 O HOH E 1101 1.96 REMARK 500 O HOH C 1129 O HOH C 1274 1.98 REMARK 500 O SER E 109 O HOH E 1102 1.98 REMARK 500 O HOH E 1142 O HOH F 266 2.00 REMARK 500 O HOH E 1343 O HOH E 1356 2.00 REMARK 500 O GLY D 12 O HOH D 201 2.02 REMARK 500 O HOH E 1320 O HOH E 1341 2.03 REMARK 500 O HOH F 221 O HOH F 254 2.04 REMARK 500 OD1 ASN A 31 O HOH A 1103 2.05 REMARK 500 O HOH F 255 O HOH F 280 2.06 REMARK 500 OD1 ASN A 275 O HOH A 1104 2.07 REMARK 500 OD1 ASP E 68 O HOH E 1103 2.08 REMARK 500 O HOH C 1255 O HOH F 276 2.08 REMARK 500 O HOH B 260 O HOH B 262 2.09 REMARK 500 OD1 ASN C 31 O HOH C 1101 2.09 REMARK 500 O LEU E 70 O HOH E 1104 2.09 REMARK 500 O HOH A 1292 O HOH A 1296 2.09 REMARK 500 O HOH E 1336 O HOH E 1350 2.12 REMARK 500 O HOH A 1266 O HOH A 1300 2.12 REMARK 500 O6 BMA G 3 O HOH A 1105 2.12 REMARK 500 O HOH F 255 O HOH F 283 2.13 REMARK 500 OH TYR E 305 O HOH E 1105 2.13 REMARK 500 OE1 GLN E 192 O HOH E 1106 2.13 REMARK 500 O SER E 141 O HOH E 1107 2.13 REMARK 500 OG1 THR E 72 O HOH E 1108 2.14 REMARK 500 O6 GAL H 2 O6 SIA H 3 2.15 REMARK 500 OE2 GLU A 66 O HOH A 1106 2.16 REMARK 500 O HOH E 1244 O HOH E 1337 2.16 REMARK 500 O PRO E 321 O HOH E 1109 2.16 REMARK 500 O GLY A 53 O HOH A 1107 2.16 REMARK 500 REMARK 500 THIS ENTRY HAS 60 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH E 1333 O HOH E 1350 21059 1.89 REMARK 500 O HOH E 1321 O HOH F 264 21049 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG F 116 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG F 116 NE - CZ - NH2 ANGL. DEV. = -5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 71 66.52 70.12 REMARK 500 SER A 155 -3.18 70.56 REMARK 500 GLN A 192 -31.34 69.98 REMARK 500 ASN A 246 -2.69 67.64 REMARK 500 HIS A 295 136.32 -174.05 REMARK 500 ALA B 5 -64.36 -95.66 REMARK 500 LYS B 127 -133.25 56.27 REMARK 500 ASN B 135 -0.16 54.60 REMARK 500 SER B 163 -123.43 41.76 REMARK 500 LEU C 70 -6.78 63.18 REMARK 500 SER C 155 -3.44 68.40 REMARK 500 GLN C 192 -31.07 70.25 REMARK 500 ASN C 246 -3.44 67.53 REMARK 500 HIS C 295 135.53 -173.92 REMARK 500 ALA D 5 -64.58 -95.69 REMARK 500 LYS D 127 -132.60 56.15 REMARK 500 GLN E 192 -29.75 68.46 REMARK 500 ASN E 246 -3.37 67.92 REMARK 500 HIS E 295 136.69 -173.42 REMARK 500 ALA F 5 -62.09 -95.02 REMARK 500 ALA F 7 19.99 57.15 REMARK 500 LYS F 127 -132.65 53.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG J 2 REMARK 630 REMARK 630 MOLECULE TYPE: OLIGOSACCHARIDE GLYCAN COMPONENT REMARK 630 MOLECULE NAME: 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 NAG A 1004 REMARK 630 NAG C 1001 REMARK 630 NAG C 1002 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: NULL REMARK 630 DETAILS: OLIGOSACCHARIDE REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VMC RELATED DB: PDB REMARK 900 RELATED ID: 5VMG RELATED DB: PDB REMARK 900 RELATED ID: 5VMJ RELATED DB: PDB DBREF 5VMF A 1 326 UNP Q9WFX3 HEMA_I18A0 18 344 DBREF 5VMF B 1 185 UNP Q9WFX3 HEMA_I18A0 345 529 DBREF 5VMF C 1 326 UNP Q9WFX3 HEMA_I18A0 18 344 DBREF 5VMF D 1 185 UNP Q9WFX3 HEMA_I18A0 345 529 DBREF 5VMF E 1 326 UNP Q9WFX3 HEMA_I18A0 18 344 DBREF 5VMF F 1 185 UNP Q9WFX3 HEMA_I18A0 345 529 SEQADV 5VMF LEU A 222 UNP Q9WFX3 GLN 240 ENGINEERED MUTATION SEQADV 5VMF SER A 224 UNP Q9WFX3 GLY 242 ENGINEERED MUTATION SEQADV 5VMF GLY B 186 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ALA B 187 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF LEU B 188 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF VAL B 189 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF PRO B 190 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ARG B 191 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF LEU C 222 UNP Q9WFX3 GLN 240 ENGINEERED MUTATION SEQADV 5VMF SER C 224 UNP Q9WFX3 GLY 242 ENGINEERED MUTATION SEQADV 5VMF GLY D 186 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ALA D 187 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF LEU D 188 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF VAL D 189 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF PRO D 190 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ARG D 191 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF LEU E 222 UNP Q9WFX3 GLN 240 ENGINEERED MUTATION SEQADV 5VMF SER E 224 UNP Q9WFX3 GLY 242 ENGINEERED MUTATION SEQADV 5VMF GLY F 186 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ALA F 187 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF LEU F 188 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF VAL F 189 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF PRO F 190 UNP Q9WFX3 EXPRESSION TAG SEQADV 5VMF ARG F 191 UNP Q9WFX3 EXPRESSION TAG SEQRES 1 A 326 ASP THR ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 A 326 ASP THR VAL ASP THR VAL LEU GLU LYS ASN VAL THR VAL SEQRES 3 A 326 THR HIS SER VAL ASN LEU LEU GLU ASP SER HIS ASN GLY SEQRES 4 A 326 LYS LEU CYS LYS LEU LYS GLY ILE ALA PRO LEU GLN LEU SEQRES 5 A 326 GLY LYS CYS ASN ILE ALA GLY TRP LEU LEU GLY ASN PRO SEQRES 6 A 326 GLU CYS ASP LEU LEU LEU THR ALA SER SER TRP SER TYR SEQRES 7 A 326 ILE VAL GLU THR SER ASN SER GLU ASN GLY THR CYS TYR SEQRES 8 A 326 PRO GLY ASP PHE ILE ASP TYR GLU GLU LEU ARG GLU GLN SEQRES 9 A 326 LEU SER SER VAL SER SER PHE GLU LYS PHE GLU ILE PHE SEQRES 10 A 326 PRO LYS THR SER SER TRP PRO ASN HIS GLU THR THR GLY SEQRES 11 A 326 VAL THR ALA ALA CYS SER TYR ALA GLY ALA SER SER PHE SEQRES 12 A 326 TYR ARG ASN LEU LEU TRP LEU THR LYS LYS GLY SER SER SEQRES 13 A 326 TYR PRO LYS LEU SER LYS SER TYR VAL ASN ASN LYS GLY SEQRES 14 A 326 LYS GLU VAL LEU VAL LEU TRP GLY VAL HIS HIS PRO PRO SEQRES 15 A 326 THR GLY THR ASP GLN GLN SER LEU TYR GLN ASN ALA ASP SEQRES 16 A 326 ALA TYR VAL SER VAL GLY SER SER LYS TYR ASN ARG ARG SEQRES 17 A 326 PHE THR PRO GLU ILE ALA ALA ARG PRO LYS VAL ARG ASP SEQRES 18 A 326 LEU ALA SER ARG MET ASN TYR TYR TRP THR LEU LEU GLU SEQRES 19 A 326 PRO GLY ASP THR ILE THR PHE GLU ALA THR GLY ASN LEU SEQRES 20 A 326 ILE ALA PRO TRP TYR ALA PHE ALA LEU ASN ARG GLY SER SEQRES 21 A 326 GLY SER GLY ILE ILE THR SER ASP ALA PRO VAL HIS ASP SEQRES 22 A 326 CYS ASN THR LYS CYS GLN THR PRO HIS GLY ALA ILE ASN SEQRES 23 A 326 SER SER LEU PRO PHE GLN ASN ILE HIS PRO VAL THR ILE SEQRES 24 A 326 GLY GLU CYS PRO LYS TYR VAL ARG SER THR LYS LEU ARG SEQRES 25 A 326 MET ALA THR GLY LEU ARG ASN ILE PRO SER ILE GLN SER SEQRES 26 A 326 ARG SEQRES 1 B 191 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 B 191 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 B 191 GLN ASN GLU GLN GLY SER GLY TYR ALA ALA ASP GLN LYS SEQRES 4 B 191 SER THR GLN ASN ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 B 191 ASN SER VAL ILE GLU LYS MET ASN THR GLN PHE THR ALA SEQRES 6 B 191 VAL GLY LYS GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 B 191 ASN LEU ASN LYS LYS VAL ASP ASP GLY PHE LEU ASP ILE SEQRES 8 B 191 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 B 191 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL ARG ASN SEQRES 10 B 191 LEU TYR GLU LYS VAL LYS SER GLN LEU LYS ASN ASN ALA SEQRES 11 B 191 LYS GLU ILE GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 B 191 CYS ASP ASP ALA CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 B 191 TYR ASP TYR PRO LYS TYR SER GLU GLU SER LYS LEU ASN SEQRES 14 B 191 ARG GLU GLU ILE ASP GLY VAL LYS LEU GLU SER MET GLY SEQRES 15 B 191 VAL TYR GLN GLY ALA LEU VAL PRO ARG SEQRES 1 C 326 ASP THR ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 C 326 ASP THR VAL ASP THR VAL LEU GLU LYS ASN VAL THR VAL SEQRES 3 C 326 THR HIS SER VAL ASN LEU LEU GLU ASP SER HIS ASN GLY SEQRES 4 C 326 LYS LEU CYS LYS LEU LYS GLY ILE ALA PRO LEU GLN LEU SEQRES 5 C 326 GLY LYS CYS ASN ILE ALA GLY TRP LEU LEU GLY ASN PRO SEQRES 6 C 326 GLU CYS ASP LEU LEU LEU THR ALA SER SER TRP SER TYR SEQRES 7 C 326 ILE VAL GLU THR SER ASN SER GLU ASN GLY THR CYS TYR SEQRES 8 C 326 PRO GLY ASP PHE ILE ASP TYR GLU GLU LEU ARG GLU GLN SEQRES 9 C 326 LEU SER SER VAL SER SER PHE GLU LYS PHE GLU ILE PHE SEQRES 10 C 326 PRO LYS THR SER SER TRP PRO ASN HIS GLU THR THR GLY SEQRES 11 C 326 VAL THR ALA ALA CYS SER TYR ALA GLY ALA SER SER PHE SEQRES 12 C 326 TYR ARG ASN LEU LEU TRP LEU THR LYS LYS GLY SER SER SEQRES 13 C 326 TYR PRO LYS LEU SER LYS SER TYR VAL ASN ASN LYS GLY SEQRES 14 C 326 LYS GLU VAL LEU VAL LEU TRP GLY VAL HIS HIS PRO PRO SEQRES 15 C 326 THR GLY THR ASP GLN GLN SER LEU TYR GLN ASN ALA ASP SEQRES 16 C 326 ALA TYR VAL SER VAL GLY SER SER LYS TYR ASN ARG ARG SEQRES 17 C 326 PHE THR PRO GLU ILE ALA ALA ARG PRO LYS VAL ARG ASP SEQRES 18 C 326 LEU ALA SER ARG MET ASN TYR TYR TRP THR LEU LEU GLU SEQRES 19 C 326 PRO GLY ASP THR ILE THR PHE GLU ALA THR GLY ASN LEU SEQRES 20 C 326 ILE ALA PRO TRP TYR ALA PHE ALA LEU ASN ARG GLY SER SEQRES 21 C 326 GLY SER GLY ILE ILE THR SER ASP ALA PRO VAL HIS ASP SEQRES 22 C 326 CYS ASN THR LYS CYS GLN THR PRO HIS GLY ALA ILE ASN SEQRES 23 C 326 SER SER LEU PRO PHE GLN ASN ILE HIS PRO VAL THR ILE SEQRES 24 C 326 GLY GLU CYS PRO LYS TYR VAL ARG SER THR LYS LEU ARG SEQRES 25 C 326 MET ALA THR GLY LEU ARG ASN ILE PRO SER ILE GLN SER SEQRES 26 C 326 ARG SEQRES 1 D 191 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 D 191 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 D 191 GLN ASN GLU GLN GLY SER GLY TYR ALA ALA ASP GLN LYS SEQRES 4 D 191 SER THR GLN ASN ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 D 191 ASN SER VAL ILE GLU LYS MET ASN THR GLN PHE THR ALA SEQRES 6 D 191 VAL GLY LYS GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 D 191 ASN LEU ASN LYS LYS VAL ASP ASP GLY PHE LEU ASP ILE SEQRES 8 D 191 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 D 191 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL ARG ASN SEQRES 10 D 191 LEU TYR GLU LYS VAL LYS SER GLN LEU LYS ASN ASN ALA SEQRES 11 D 191 LYS GLU ILE GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 D 191 CYS ASP ASP ALA CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 D 191 TYR ASP TYR PRO LYS TYR SER GLU GLU SER LYS LEU ASN SEQRES 14 D 191 ARG GLU GLU ILE ASP GLY VAL LYS LEU GLU SER MET GLY SEQRES 15 D 191 VAL TYR GLN GLY ALA LEU VAL PRO ARG SEQRES 1 E 326 ASP THR ILE CYS ILE GLY TYR HIS ALA ASN ASN SER THR SEQRES 2 E 326 ASP THR VAL ASP THR VAL LEU GLU LYS ASN VAL THR VAL SEQRES 3 E 326 THR HIS SER VAL ASN LEU LEU GLU ASP SER HIS ASN GLY SEQRES 4 E 326 LYS LEU CYS LYS LEU LYS GLY ILE ALA PRO LEU GLN LEU SEQRES 5 E 326 GLY LYS CYS ASN ILE ALA GLY TRP LEU LEU GLY ASN PRO SEQRES 6 E 326 GLU CYS ASP LEU LEU LEU THR ALA SER SER TRP SER TYR SEQRES 7 E 326 ILE VAL GLU THR SER ASN SER GLU ASN GLY THR CYS TYR SEQRES 8 E 326 PRO GLY ASP PHE ILE ASP TYR GLU GLU LEU ARG GLU GLN SEQRES 9 E 326 LEU SER SER VAL SER SER PHE GLU LYS PHE GLU ILE PHE SEQRES 10 E 326 PRO LYS THR SER SER TRP PRO ASN HIS GLU THR THR GLY SEQRES 11 E 326 VAL THR ALA ALA CYS SER TYR ALA GLY ALA SER SER PHE SEQRES 12 E 326 TYR ARG ASN LEU LEU TRP LEU THR LYS LYS GLY SER SER SEQRES 13 E 326 TYR PRO LYS LEU SER LYS SER TYR VAL ASN ASN LYS GLY SEQRES 14 E 326 LYS GLU VAL LEU VAL LEU TRP GLY VAL HIS HIS PRO PRO SEQRES 15 E 326 THR GLY THR ASP GLN GLN SER LEU TYR GLN ASN ALA ASP SEQRES 16 E 326 ALA TYR VAL SER VAL GLY SER SER LYS TYR ASN ARG ARG SEQRES 17 E 326 PHE THR PRO GLU ILE ALA ALA ARG PRO LYS VAL ARG ASP SEQRES 18 E 326 LEU ALA SER ARG MET ASN TYR TYR TRP THR LEU LEU GLU SEQRES 19 E 326 PRO GLY ASP THR ILE THR PHE GLU ALA THR GLY ASN LEU SEQRES 20 E 326 ILE ALA PRO TRP TYR ALA PHE ALA LEU ASN ARG GLY SER SEQRES 21 E 326 GLY SER GLY ILE ILE THR SER ASP ALA PRO VAL HIS ASP SEQRES 22 E 326 CYS ASN THR LYS CYS GLN THR PRO HIS GLY ALA ILE ASN SEQRES 23 E 326 SER SER LEU PRO PHE GLN ASN ILE HIS PRO VAL THR ILE SEQRES 24 E 326 GLY GLU CYS PRO LYS TYR VAL ARG SER THR LYS LEU ARG SEQRES 25 E 326 MET ALA THR GLY LEU ARG ASN ILE PRO SER ILE GLN SER SEQRES 26 E 326 ARG SEQRES 1 F 191 GLY LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU GLY GLY SEQRES 2 F 191 TRP THR GLY MET ILE ASP GLY TRP TYR GLY TYR HIS HIS SEQRES 3 F 191 GLN ASN GLU GLN GLY SER GLY TYR ALA ALA ASP GLN LYS SEQRES 4 F 191 SER THR GLN ASN ALA ILE ASP GLY ILE THR ASN LYS VAL SEQRES 5 F 191 ASN SER VAL ILE GLU LYS MET ASN THR GLN PHE THR ALA SEQRES 6 F 191 VAL GLY LYS GLU PHE ASN ASN LEU GLU ARG ARG ILE GLU SEQRES 7 F 191 ASN LEU ASN LYS LYS VAL ASP ASP GLY PHE LEU ASP ILE SEQRES 8 F 191 TRP THR TYR ASN ALA GLU LEU LEU VAL LEU LEU GLU ASN SEQRES 9 F 191 GLU ARG THR LEU ASP PHE HIS ASP SER ASN VAL ARG ASN SEQRES 10 F 191 LEU TYR GLU LYS VAL LYS SER GLN LEU LYS ASN ASN ALA SEQRES 11 F 191 LYS GLU ILE GLY ASN GLY CYS PHE GLU PHE TYR HIS LYS SEQRES 12 F 191 CYS ASP ASP ALA CYS MET GLU SER VAL ARG ASN GLY THR SEQRES 13 F 191 TYR ASP TYR PRO LYS TYR SER GLU GLU SER LYS LEU ASN SEQRES 14 F 191 ARG GLU GLU ILE ASP GLY VAL LYS LEU GLU SER MET GLY SEQRES 15 F 191 VAL TYR GLN GLY ALA LEU VAL PRO ARG HET NAG G 1 27 HET NAG G 2 27 HET BMA G 3 21 HET NAG H 1 29 HET GAL H 2 21 HET SIA H 3 37 HET NAG I 1 29 HET GAL I 2 21 HET SIA I 3 37 HET NAG J 1 27 HET NAG J 2 25 HET NAG K 1 29 HET GAL K 2 21 HET SIA K 3 37 HET NAG A1004 28 HET NAG C1001 28 HET NAG C1002 28 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID FORMUL 7 NAG 10(C8 H15 N O6) FORMUL 7 BMA C6 H12 O6 FORMUL 8 GAL 3(C6 H12 O6) FORMUL 8 SIA 3(C11 H19 N O9) FORMUL 15 HOH *900(H2 O) HELIX 1 AA1 ASN A 56 GLY A 63 1 8 HELIX 2 AA2 ASP A 97 LEU A 105 1 9 HELIX 3 AA3 PRO A 118 TRP A 123 1 6 HELIX 4 AA4 THR A 183 GLN A 192 1 10 HELIX 5 AA5 ASP B 37 LYS B 58 1 22 HELIX 6 AA6 GLU B 74 LYS B 127 1 54 HELIX 7 AA7 ASP B 145 ASN B 154 1 10 HELIX 8 AA8 TYR B 159 SER B 163 5 5 HELIX 9 AA9 ASN C 56 GLY C 63 1 8 HELIX 10 AB1 ASP C 97 LEU C 105 1 9 HELIX 11 AB2 PRO C 118 TRP C 123 1 6 HELIX 12 AB3 THR C 183 GLN C 192 1 10 HELIX 13 AB4 ASP D 37 LYS D 58 1 22 HELIX 14 AB5 GLU D 74 LYS D 127 1 54 HELIX 15 AB6 ASP D 145 ASN D 154 1 10 HELIX 16 AB7 TYR D 159 SER D 163 5 5 HELIX 17 AB8 ASN E 56 GLY E 63 1 8 HELIX 18 AB9 ASN E 64 ASP E 68 5 5 HELIX 19 AC1 ASP E 97 LEU E 105 1 9 HELIX 20 AC2 PRO E 118 TRP E 123 1 6 HELIX 21 AC3 THR E 183 GLN E 192 1 10 HELIX 22 AC4 ASP F 37 LYS F 58 1 22 HELIX 23 AC5 GLU F 74 LYS F 127 1 54 HELIX 24 AC6 ASP F 145 ASN F 154 1 10 HELIX 25 AC7 TYR F 159 SER F 163 5 5 SHEET 1 AA1 5 GLY B 31 ALA B 36 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N TYR B 24 O ALA B 35 SHEET 3 AA1 5 THR A 2 TYR A 7 -1 N CYS A 4 O HIS B 25 SHEET 4 AA1 5 CYS B 137 PHE B 140 -1 O PHE B 138 N ILE A 3 SHEET 5 AA1 5 ALA B 130 GLY B 134 -1 N LYS B 131 O GLU B 139 SHEET 1 AA2 2 THR A 15 VAL A 16 0 SHEET 2 AA2 2 VAL A 24 THR A 25 -1 O VAL A 24 N VAL A 16 SHEET 1 AA3 2 SER A 29 ASN A 31 0 SHEET 2 AA3 2 ARG A 312 ALA A 314 -1 O MET A 313 N VAL A 30 SHEET 1 AA4 3 LEU A 33 GLU A 34 0 SHEET 2 AA4 3 PHE A 291 GLN A 292 1 O PHE A 291 N GLU A 34 SHEET 3 AA4 3 LYS A 304 TYR A 305 1 O LYS A 304 N GLN A 292 SHEET 1 AA5 2 LEU A 41 LEU A 44 0 SHEET 2 AA5 2 VAL A 271 THR A 276 1 O CYS A 274 N LYS A 43 SHEET 1 AA6 3 LEU A 50 GLN A 51 0 SHEET 2 AA6 3 ILE A 79 GLU A 81 1 O VAL A 80 N LEU A 50 SHEET 3 AA6 3 ILE A 264 THR A 266 1 O ILE A 265 N ILE A 79 SHEET 1 AA7 5 VAL A 108 GLU A 115 0 SHEET 2 AA7 5 TYR A 252 ARG A 258 -1 O ALA A 255 N GLU A 112 SHEET 3 AA7 5 GLU A 171 HIS A 180 -1 N LEU A 173 O PHE A 254 SHEET 4 AA7 5 LEU A 247 PRO A 250 -1 O ILE A 248 N GLY A 177 SHEET 5 AA7 5 LEU A 147 TRP A 149 -1 N LEU A 148 O ALA A 249 SHEET 1 AA8 4 VAL A 108 GLU A 115 0 SHEET 2 AA8 4 TYR A 252 ARG A 258 -1 O ALA A 255 N GLU A 112 SHEET 3 AA8 4 GLU A 171 HIS A 180 -1 N LEU A 173 O PHE A 254 SHEET 4 AA8 4 ARG A 225 LEU A 233 -1 O LEU A 233 N VAL A 172 SHEET 1 AA9 2 THR A 132 TYR A 137 0 SHEET 2 AA9 2 ALA A 140 SER A 142 -1 O SER A 142 N THR A 132 SHEET 1 AB1 4 LEU A 160 VAL A 165 0 SHEET 2 AB1 4 THR A 238 ALA A 243 -1 O PHE A 241 N LYS A 162 SHEET 3 AB1 4 VAL A 198 GLY A 201 -1 N SER A 199 O GLU A 242 SHEET 4 AB1 4 ASN A 206 PHE A 209 -1 O PHE A 209 N VAL A 198 SHEET 1 AB2 3 CYS A 278 GLN A 279 0 SHEET 2 AB2 3 ILE A 299 GLY A 300 -1 O ILE A 299 N GLN A 279 SHEET 3 AB2 3 THR B 64 ALA B 65 -1 O THR B 64 N GLY A 300 SHEET 1 AB3 5 GLY D 31 ALA D 36 0 SHEET 2 AB3 5 TYR D 22 ASN D 28 -1 N TYR D 24 O ALA D 35 SHEET 3 AB3 5 THR C 2 TYR C 7 -1 N GLY C 6 O GLY D 23 SHEET 4 AB3 5 CYS D 137 PHE D 140 -1 O PHE D 138 N ILE C 3 SHEET 5 AB3 5 ALA D 130 GLU D 132 -1 N LYS D 131 O GLU D 139 SHEET 1 AB4 2 THR C 15 VAL C 16 0 SHEET 2 AB4 2 VAL C 24 THR C 25 -1 O VAL C 24 N VAL C 16 SHEET 1 AB5 2 SER C 29 ASN C 31 0 SHEET 2 AB5 2 ARG C 312 ALA C 314 -1 O MET C 313 N VAL C 30 SHEET 1 AB6 3 LEU C 33 GLU C 34 0 SHEET 2 AB6 3 PHE C 291 GLN C 292 1 O PHE C 291 N GLU C 34 SHEET 3 AB6 3 LYS C 304 TYR C 305 1 O LYS C 304 N GLN C 292 SHEET 1 AB7 2 LEU C 41 LEU C 44 0 SHEET 2 AB7 2 VAL C 271 THR C 276 1 O CYS C 274 N LYS C 43 SHEET 1 AB8 3 LEU C 50 GLN C 51 0 SHEET 2 AB8 3 ILE C 79 GLU C 81 1 O VAL C 80 N LEU C 50 SHEET 3 AB8 3 ILE C 264 THR C 266 1 O ILE C 265 N ILE C 79 SHEET 1 AB9 5 VAL C 108 GLU C 115 0 SHEET 2 AB9 5 TYR C 252 ARG C 258 -1 O ALA C 255 N GLU C 112 SHEET 3 AB9 5 GLU C 171 HIS C 180 -1 N LEU C 173 O PHE C 254 SHEET 4 AB9 5 LEU C 247 PRO C 250 -1 O ILE C 248 N GLY C 177 SHEET 5 AB9 5 LEU C 147 TRP C 149 -1 N LEU C 148 O ALA C 249 SHEET 1 AC1 4 VAL C 108 GLU C 115 0 SHEET 2 AC1 4 TYR C 252 ARG C 258 -1 O ALA C 255 N GLU C 112 SHEET 3 AC1 4 GLU C 171 HIS C 180 -1 N LEU C 173 O PHE C 254 SHEET 4 AC1 4 ARG C 225 LEU C 233 -1 O ARG C 225 N HIS C 180 SHEET 1 AC2 2 THR C 132 TYR C 137 0 SHEET 2 AC2 2 ALA C 140 SER C 142 -1 O ALA C 140 N TYR C 137 SHEET 1 AC3 4 LEU C 160 VAL C 165 0 SHEET 2 AC3 4 THR C 238 ALA C 243 -1 O PHE C 241 N LYS C 162 SHEET 3 AC3 4 VAL C 198 GLY C 201 -1 N SER C 199 O GLU C 242 SHEET 4 AC3 4 ASN C 206 PHE C 209 -1 O PHE C 209 N VAL C 198 SHEET 1 AC4 3 CYS C 278 GLN C 279 0 SHEET 2 AC4 3 ILE C 299 GLY C 300 -1 O ILE C 299 N GLN C 279 SHEET 3 AC4 3 THR D 64 ALA D 65 -1 O THR D 64 N GLY C 300 SHEET 1 AC5 5 GLY F 31 ALA F 36 0 SHEET 2 AC5 5 TYR F 22 ASN F 28 -1 N TYR F 24 O ALA F 35 SHEET 3 AC5 5 THR E 2 TYR E 7 -1 N THR E 2 O GLN F 27 SHEET 4 AC5 5 CYS F 137 PHE F 140 -1 O PHE F 138 N ILE E 3 SHEET 5 AC5 5 ALA F 130 GLU F 132 -1 N LYS F 131 O GLU F 139 SHEET 1 AC6 2 THR E 15 VAL E 16 0 SHEET 2 AC6 2 VAL E 24 THR E 25 -1 O VAL E 24 N VAL E 16 SHEET 1 AC7 2 SER E 29 ASN E 31 0 SHEET 2 AC7 2 ARG E 312 ALA E 314 -1 O MET E 313 N VAL E 30 SHEET 1 AC8 3 LEU E 33 GLU E 34 0 SHEET 2 AC8 3 PHE E 291 GLN E 292 1 O PHE E 291 N GLU E 34 SHEET 3 AC8 3 LYS E 304 TYR E 305 1 O LYS E 304 N GLN E 292 SHEET 1 AC9 2 LEU E 41 LEU E 44 0 SHEET 2 AC9 2 VAL E 271 THR E 276 1 O CYS E 274 N LYS E 43 SHEET 1 AD1 3 LEU E 50 GLN E 51 0 SHEET 2 AD1 3 ILE E 79 GLU E 81 1 O VAL E 80 N LEU E 50 SHEET 3 AD1 3 ILE E 264 THR E 266 1 O ILE E 265 N ILE E 79 SHEET 1 AD2 5 GLU E 112 GLU E 115 0 SHEET 2 AD2 5 TYR E 252 LEU E 256 -1 O ALA E 255 N GLU E 112 SHEET 3 AD2 5 GLU E 171 HIS E 180 -1 N LEU E 173 O PHE E 254 SHEET 4 AD2 5 LEU E 247 PRO E 250 -1 O ILE E 248 N GLY E 177 SHEET 5 AD2 5 LEU E 147 TRP E 149 -1 N LEU E 148 O ALA E 249 SHEET 1 AD3 4 GLU E 112 GLU E 115 0 SHEET 2 AD3 4 TYR E 252 LEU E 256 -1 O ALA E 255 N GLU E 112 SHEET 3 AD3 4 GLU E 171 HIS E 180 -1 N LEU E 173 O PHE E 254 SHEET 4 AD3 4 ARG E 225 LEU E 233 -1 O LEU E 233 N VAL E 172 SHEET 1 AD4 2 HIS E 126 GLU E 127 0 SHEET 2 AD4 2 THR E 151 LYS E 152 -1 O THR E 151 N GLU E 127 SHEET 1 AD5 2 THR E 132 TYR E 137 0 SHEET 2 AD5 2 ALA E 140 SER E 142 -1 O ALA E 140 N TYR E 137 SHEET 1 AD6 4 LEU E 160 VAL E 165 0 SHEET 2 AD6 4 THR E 238 ALA E 243 -1 O PHE E 241 N LYS E 162 SHEET 3 AD6 4 VAL E 198 GLY E 201 -1 N SER E 199 O GLU E 242 SHEET 4 AD6 4 ASN E 206 PHE E 209 -1 O PHE E 209 N VAL E 198 SHEET 1 AD7 4 ALA E 284 ILE E 285 0 SHEET 2 AD7 4 CYS E 278 GLN E 279 -1 N CYS E 278 O ILE E 285 SHEET 3 AD7 4 ILE E 299 GLY E 300 -1 O ILE E 299 N GLN E 279 SHEET 4 AD7 4 THR F 64 ALA F 65 -1 O THR F 64 N GLY E 300 SSBOND 1 CYS A 4 CYS B 137 1555 1555 2.03 SSBOND 2 CYS A 42 CYS A 274 1555 1555 2.03 SSBOND 3 CYS A 55 CYS A 67 1555 1555 2.03 SSBOND 4 CYS A 90 CYS A 135 1555 1555 2.05 SSBOND 5 CYS A 278 CYS A 302 1555 1555 2.05 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.03 SSBOND 7 CYS C 4 CYS D 137 1555 1555 2.03 SSBOND 8 CYS C 42 CYS C 274 1555 1555 2.03 SSBOND 9 CYS C 55 CYS C 67 1555 1555 2.03 SSBOND 10 CYS C 90 CYS C 135 1555 1555 2.04 SSBOND 11 CYS C 278 CYS C 302 1555 1555 2.04 SSBOND 12 CYS D 144 CYS D 148 1555 1555 2.03 SSBOND 13 CYS E 4 CYS F 137 1555 1555 2.04 SSBOND 14 CYS E 42 CYS E 274 1555 1555 2.04 SSBOND 15 CYS E 55 CYS E 67 1555 1555 2.02 SSBOND 16 CYS E 90 CYS E 135 1555 1555 2.06 SSBOND 17 CYS E 278 CYS E 302 1555 1555 2.05 SSBOND 18 CYS F 144 CYS F 148 1555 1555 2.04 LINK ND2 ASN A 87 C1 NAG G 1 1555 1555 1.45 LINK ND2 ASN A 286 C1 NAG A1004 1555 1555 1.46 LINK ND2 ASN C 87 C1 NAG C1001 1555 1555 1.44 LINK ND2 ASN C 286 C1 NAG C1002 1555 1555 1.44 LINK ND2 ASN E 87 C1 NAG J 1 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O4 NAG H 1 C1 GAL H 2 1555 1555 1.44 LINK O6 GAL H 2 C2 SIA H 3 1555 1555 1.43 LINK O4 NAG I 1 C1 GAL I 2 1555 1555 1.44 LINK O6 GAL I 2 C2 SIA I 3 1555 1555 1.44 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG K 1 C1 GAL K 2 1555 1555 1.44 LINK O6 GAL K 2 C2 SIA K 3 1555 1555 1.43 CRYST1 95.750 80.260 121.230 90.00 91.35 90.00 P 1 21 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010444 0.000000 0.000246 0.00000 SCALE2 0.000000 0.012460 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008251 0.00000