HEADER HYDROLASE 08-MAY-17 5VQD TITLE BETA-GLUCOSIDE PHOSPHORYLASE BGLX COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GLUCOSIDE PHOSPHORYLASE BGLX; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNIDENTIFIED; SOURCE 3 ORGANISM_TAXID: 32644; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS BETA-GLUCOSIDE PHOSPHORYLASE, CAZY FAMILY 3 GH3 BGLX, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.PATEL,B.L.MARK REVDAT 5 04-OCT-23 5VQD 1 REMARK REVDAT 4 08-JAN-20 5VQD 1 REMARK REVDAT 3 14-MAR-18 5VQD 1 JRNL REVDAT 2 24-JAN-18 5VQD 1 JRNL REVDAT 1 17-JAN-18 5VQD 0 JRNL AUTH S.S.MACDONALD,A.PATEL,V.L.C.LARMOUR,C.MORGAN-LANG, JRNL AUTH 2 S.J.HALLAM,B.L.MARK,S.G.WITHERS JRNL TITL STRUCTURAL AND MECHANISTIC ANALYSIS OF A BETA-GLYCOSIDE JRNL TITL 2 PHOSPHORYLASE IDENTIFIED BY SCREENING A METAGENOMIC LIBRARY. JRNL REF J. BIOL. CHEM. V. 293 3451 2018 JRNL REFN ESSN 1083-351X JRNL PMID 29317495 JRNL DOI 10.1074/JBC.RA117.000948 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2481: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.13 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.4 REMARK 3 NUMBER OF REFLECTIONS : 30206 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1964 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.1308 - 5.0558 1.00 2281 162 0.1889 0.2079 REMARK 3 2 5.0558 - 4.0152 1.00 2206 151 0.1401 0.1619 REMARK 3 3 4.0152 - 3.5083 0.84 1826 125 0.1911 0.2283 REMARK 3 4 3.5083 - 3.1878 0.91 1981 134 0.1836 0.2463 REMARK 3 5 3.1878 - 2.9595 1.00 2151 158 0.1968 0.2489 REMARK 3 6 2.9595 - 2.7851 1.00 2137 147 0.1989 0.2308 REMARK 3 7 2.7851 - 2.6457 0.84 1810 116 0.1994 0.2584 REMARK 3 8 2.6457 - 2.5305 1.00 2137 149 0.1986 0.2550 REMARK 3 9 2.5305 - 2.4331 1.00 2156 152 0.2041 0.2857 REMARK 3 10 2.4331 - 2.3492 1.00 2152 144 0.2265 0.2901 REMARK 3 11 2.3492 - 2.2758 0.97 2066 149 0.2509 0.2933 REMARK 3 12 2.2758 - 2.2107 0.52 1094 80 0.5418 0.7047 REMARK 3 13 2.2107 - 2.1525 1.00 2119 139 0.2202 0.2965 REMARK 3 14 2.1525 - 2.1000 1.00 2126 158 0.1807 0.2275 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4408 REMARK 3 ANGLE : 0.565 5975 REMARK 3 CHIRALITY : 0.042 667 REMARK 3 PLANARITY : 0.003 773 REMARK 3 DIHEDRAL : 11.688 2663 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VQD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227857. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 HKL REMARK 200 DATA SCALING SOFTWARE : AIMLESS CCP4 7.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30635 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 54.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 10.10 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 10.30 REMARK 200 R MERGE FOR SHELL (I) : 0.25900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (DEV_2481: ???) REMARK 200 STARTING MODEL: 3BMX (SCULPTOR EDITED) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27% PEG 1000 AND 100 MM MES (PH 6.5), REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.59500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 80.59500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 40.26000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.07500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 40.26000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.07500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 80.59500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 40.26000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 42.07500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 80.59500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 40.26000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 42.07500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -80.59500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 44 REMARK 465 LYS A 45 REMARK 465 PRO A 46 REMARK 465 GLY A 47 REMARK 465 CYS A 48 REMARK 465 ASP A 49 REMARK 465 PRO A 50 REMARK 465 ASP A 491 REMARK 465 PHE A 492 REMARK 465 LEU A 567 REMARK 465 HIS A 568 REMARK 465 HIS A 569 REMARK 465 HIS A 570 REMARK 465 HIS A 571 REMARK 465 HIS A 572 REMARK 465 HIS A 573 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 15 CD CE NZ REMARK 470 GLU A 16 CD OE1 OE2 REMARK 470 TRP A 43 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 43 CZ3 CH2 REMARK 470 LEU A 51 CG CD1 CD2 REMARK 470 LYS A 55 CD CE NZ REMARK 470 LYS A 68 CE NZ REMARK 470 LYS A 70 CD CE NZ REMARK 470 ARG A 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 81 NZ REMARK 470 LYS A 84 CE NZ REMARK 470 LYS A 185 CG CD CE NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 LYS A 268 CE NZ REMARK 470 GLU A 361 CG CD OE1 OE2 REMARK 470 ARG A 362 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 363 CG CD CE NZ REMARK 470 ASP A 364 CG OD1 OD2 REMARK 470 LYS A 378 CD CE NZ REMARK 470 LYS A 381 CD CE NZ REMARK 470 LYS A 382 CD CE NZ REMARK 470 LYS A 398 CE NZ REMARK 470 LYS A 400 CG CD CE NZ REMARK 470 LYS A 422 NZ REMARK 470 GLU A 424 CD OE1 OE2 REMARK 470 LYS A 440 CD CE NZ REMARK 470 LYS A 477 CE NZ REMARK 470 SER A 490 CA C O CB OG REMARK 470 LEU A 493 N CA CB CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 989 O HOH A 1099 1.99 REMARK 500 O LYS A 464 O HOH A 701 1.99 REMARK 500 O HOH A 1108 O HOH A 1162 2.00 REMARK 500 O HOH A 799 O HOH A 1146 2.00 REMARK 500 OE2 GLU A 3 O HOH A 702 2.01 REMARK 500 O HOH A 907 O HOH A 1092 2.03 REMARK 500 O HOH A 1055 O HOH A 1088 2.04 REMARK 500 OD2 ASP A 466 O HOH A 703 2.06 REMARK 500 O HOH A 1113 O HOH A 1132 2.06 REMARK 500 O HOH A 1145 O HOH A 1166 2.07 REMARK 500 O HOH A 1016 O HOH A 1039 2.08 REMARK 500 O HOH A 980 O HOH A 1031 2.08 REMARK 500 O HOH A 845 O HOH A 1090 2.10 REMARK 500 O HOH A 807 O HOH A 1013 2.10 REMARK 500 O HOH A 1111 O HOH A 1132 2.11 REMARK 500 O PRO A 254 O HOH A 704 2.11 REMARK 500 OD1 ASP A 121 O HOH A 705 2.13 REMARK 500 NH1 ARG A 465 O HOH A 703 2.14 REMARK 500 OD1 ASP A 233 O HOH A 706 2.14 REMARK 500 O ASP A 364 O HOH A 707 2.14 REMARK 500 O HOH A 777 O HOH A 1159 2.15 REMARK 500 OE2 GLU A 218 O HOH A 708 2.15 REMARK 500 O HOH A 895 O HOH A 1054 2.16 REMARK 500 O GLU A 441 O HOH A 709 2.16 REMARK 500 OE2 GLU A 74 O HOH A 710 2.16 REMARK 500 OE1 GLU A 130 O HOH A 711 2.16 REMARK 500 O HOH A 985 O HOH A 1025 2.17 REMARK 500 OD2 ASP A 397 O HOH A 712 2.18 REMARK 500 O HOH A 1035 O HOH A 1089 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD2 ASP A 221 HZ2 LYS A 411 7544 1.56 REMARK 500 O HOH A 806 O HOH A 1029 5555 2.00 REMARK 500 O HOH A 1051 O HOH A 1158 3554 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 11 -67.37 -90.21 REMARK 500 PHE A 57 172.13 177.80 REMARK 500 ASN A 101 -0.07 67.39 REMARK 500 THR A 160 -97.53 -99.98 REMARK 500 ASN A 161 -133.32 59.24 REMARK 500 TYR A 165 30.29 -87.90 REMARK 500 THR A 222 -81.47 -114.29 REMARK 500 HIS A 242 44.15 -90.08 REMARK 500 ILE A 274 -60.99 -90.27 REMARK 500 MET A 299 147.59 -173.24 REMARK 500 PHE A 318 151.72 79.15 REMARK 500 LEU A 320 -77.91 -93.98 REMARK 500 ASP A 364 -35.44 -146.19 REMARK 500 VAL A 365 -77.21 83.68 REMARK 500 SER A 512 -94.29 -157.65 REMARK 500 TYR A 530 -21.67 72.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1169 DISTANCE = 6.95 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VQE RELATED DB: PDB DBREF 5VQD A 1 573 PDB 5VQD 5VQD 1 573 SEQRES 1 A 573 MET TYR GLU SER ILE LEU SER ILE LYS PRO TYR ASN LEU SEQRES 2 A 573 SER LYS GLU GLN ILE THR TRP VAL ASN GLN THR LEU VAL SEQRES 3 A 573 SER LEU SER ASP ASP GLU LYS LEU GLY GLN LEU ILE CYS SEQRES 4 A 573 GLU ILE ILE TRP ASP LYS PRO GLY CYS ASP PRO LEU ASP SEQRES 5 A 573 VAL MET LYS HIS PHE LEU PRO GLY ALA VAL MET TYR ARG SEQRES 6 A 573 PRO PHE LYS ALA LYS ARG MET ARG GLU PHE THR GLN ARG SEQRES 7 A 573 LEU GLN LYS ALA SER LYS ILE PRO LEU LEU ILE ALA CYS SEQRES 8 A 573 ASN LEU GLU ARG GLY GLY SER GLY GLY ASN GLY GLY MET SEQRES 9 A 573 GLU ASP GLY THR TYR VAL ALA SER PRO MET GLY VAL ALA SEQRES 10 A 573 ALA THR ASP ASP GLU SER SER ALA GLU HIS LEU GLY GLU SEQRES 11 A 573 VAL CYS ALA SER GLU GLY SER ALA VAL GLY VAL ASN TRP SEQRES 12 A 573 THR TYR GLU PRO ILE ILE ASP ILE ASP MET ASN PRO GLU SEQRES 13 A 573 ASN PRO ILE THR ASN VAL ARG THR TYR GLY SER ASP PRO SEQRES 14 A 573 GLU ARG ILE ILE ARG MET ALA LYS ALA TYR CYS ARG GLY SEQRES 15 A 573 CYS ARG LYS TRP GLY VAL LEU THR THR ILE LYS HIS PHE SEQRES 16 A 573 PRO GLY ASP GLY VAL ASP TYR ARG ASP GLN HIS LEU MET SEQRES 17 A 573 SER SER VAL ASN ASN LEU SER ALA ASP GLU TRP MET ASP SEQRES 18 A 573 THR TYR GLY ARG ILE TYR GLN ALA LEU ILE GLU ASP GLY SEQRES 19 A 573 ALA GLU THR LEU MET SER ALA HIS ILE ARG GLN PRO ASN SEQRES 20 A 573 VAL THR ARG MET VAL ASN PRO LEU ILE LYS ASP GLU GLU SEQRES 21 A 573 ILE MET PRO GLY SER LEU SER LYS GLU LEU MET GLN GLY SEQRES 22 A 573 ILE LEU ARG GLY ARG PHE HIS PHE ASN GLY LEU ILE CYS SEQRES 23 A 573 THR ASP ALA THR GLN MET VAL GLY TYR THR CYS SER MET SEQRES 24 A 573 PRO ARG HIS GLU ALA LEU PRO THR SER ILE GLN ASN GLY SEQRES 25 A 573 ALA ASP MET LEU THR PHE THR LEU ASN PRO THR GLU ASP SEQRES 26 A 573 PHE LYS ALA LEU GLN GLU GLY LEU SER CYS GLY LEU LEU SEQRES 27 A 573 THR HIS GLU ARG LEU ASP GLU ALA VAL ALA ARG ILE LEU SEQRES 28 A 573 GLY MET LYS ALA LYS LEU ARG LEU PRO GLU ARG LYS ASP SEQRES 29 A 573 VAL VAL PRO PRO LEU HIS ALA MET GLU ARG ILE GLN SER SEQRES 30 A 573 LYS LYS HIS LYS LYS TRP ALA LEU GLU ILE ALA ASP GLU SEQRES 31 A 573 SER ILE THR LEU VAL LYS ASP LYS GLN LYS GLY LEU LEU SEQRES 32 A 573 PRO LEU SER PRO GLN LYS THR LYS ARG ILE ILE LEU VAL SEQRES 33 A 573 GLN ALA THR ASN GLU LYS PRO GLU GLY GLY TYR LEU SER SEQRES 34 A 573 GLU ALA ARG LEU PHE LYS GLY LEU LEU GLU LYS GLU GLY SEQRES 35 A 573 PHE ILE VAL HIS TRP PHE GLU GLU VAL PRO ARG PRO GLY SEQRES 36 A 573 THR GLY TYR SER ILE GLU ASP LEU LYS ARG ASP THR ASP SEQRES 37 A 573 LEU PHE ILE TYR TYR ALA ASN PHE LYS VAL SER SER ASN SEQRES 38 A 573 GLN THR THR ILE ARG LEU VAL TRP SER ASP PHE LEU GLY SEQRES 39 A 573 ASP SER SER PRO LYS PHE VAL CYS ASP VAL PRO THR LEU SEQRES 40 A 573 PHE LEU SER PHE SER ASN PRO TYR HIS LEU VAL ASP VAL SEQRES 41 A 573 PRO MET VAL LYS THR TYR ILE ASN ALA TYR THR SER ASN SEQRES 42 A 573 GLU ALA THR VAL ARG MET MET ILE GLU LYS LEU MET GLY SEQRES 43 A 573 ARG SER SER PHE LYS GLY LYS SER PRO VAL ASP PRO PHE SEQRES 44 A 573 ALA GLY LEU TRP ASP ALA ARG LEU HIS HIS HIS HIS HIS SEQRES 45 A 573 HIS HET GOL A 601 14 HET GOL A 602 14 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 HOH *469(H2 O) HELIX 1 AA1 TYR A 2 SER A 7 1 6 HELIX 2 AA2 SER A 14 LEU A 28 1 15 HELIX 3 AA3 SER A 29 LEU A 37 1 9 HELIX 4 AA4 LYS A 68 SER A 83 1 16 HELIX 5 AA5 SER A 112 THR A 119 1 8 HELIX 6 AA6 ASP A 121 VAL A 139 1 19 HELIX 7 AA7 THR A 160 THR A 164 5 5 HELIX 8 AA8 ASP A 168 LYS A 185 1 18 HELIX 9 AA9 SER A 215 THR A 222 1 8 HELIX 10 AB1 THR A 222 GLY A 234 1 13 HELIX 11 AB2 GLN A 245 ASN A 253 1 9 HELIX 12 AB3 PRO A 263 LEU A 266 5 4 HELIX 13 AB4 SER A 267 GLN A 272 1 6 HELIX 14 AB5 MET A 292 CYS A 297 1 6 HELIX 15 AB6 PRO A 300 ASN A 311 1 12 HELIX 16 AB7 ASN A 321 GLY A 336 1 16 HELIX 17 AB8 THR A 339 LEU A 357 1 19 HELIX 18 AB9 PRO A 368 ILE A 375 5 8 HELIX 19 AC1 SER A 377 ILE A 392 1 16 HELIX 20 AC2 LEU A 428 GLY A 442 1 15 HELIX 21 AC3 GLU A 449 VAL A 451 5 3 HELIX 22 AC4 SER A 459 THR A 467 1 9 HELIX 23 AC5 TYR A 515 ASP A 519 5 5 HELIX 24 AC6 ASN A 533 MET A 545 1 13 HELIX 25 AC7 LEU A 562 ARG A 566 5 5 SHEET 1 AA1 8 TRP A 143 THR A 144 0 SHEET 2 AA1 8 LEU A 88 CYS A 91 1 N CYS A 91 O TRP A 143 SHEET 3 AA1 8 ALA A 61 TYR A 64 1 N VAL A 62 O ALA A 90 SHEET 4 AA1 8 ILE A 38 ILE A 42 1 N ILE A 42 O MET A 63 SHEET 5 AA1 8 MET A 315 THR A 317 1 O LEU A 316 N CYS A 39 SHEET 6 AA1 8 LEU A 284 ALA A 289 1 N THR A 287 O MET A 315 SHEET 7 AA1 8 THR A 237 SER A 240 1 N LEU A 238 O LEU A 284 SHEET 8 AA1 8 THR A 191 PHE A 195 1 N ILE A 192 O MET A 239 SHEET 1 AA2 6 THR A 393 ASP A 397 0 SHEET 2 AA2 6 THR A 525 ASN A 528 -1 O ASN A 528 N THR A 393 SHEET 3 AA2 6 THR A 506 SER A 510 1 N SER A 510 O ILE A 527 SHEET 4 AA2 6 LEU A 469 ASN A 475 1 N PHE A 470 O LEU A 507 SHEET 5 AA2 6 ARG A 412 THR A 419 1 N VAL A 416 O ILE A 471 SHEET 6 AA2 6 ILE A 444 TRP A 447 1 O ILE A 444 N ILE A 413 CISPEP 1 LYS A 9 PRO A 10 0 0.61 CISPEP 2 GLU A 146 PRO A 147 0 5.46 CISPEP 3 LYS A 193 HIS A 194 0 -0.43 CISPEP 4 PHE A 195 PRO A 196 0 4.11 CISPEP 5 LEU A 403 PRO A 404 0 0.88 SITE 1 AC1 6 ASN A 92 LYS A 193 HIS A 194 MET A 239 SITE 2 AC1 6 ASP A 288 HOH A 766 SITE 1 AC2 6 THR A 119 ASP A 121 GLU A 390 LYS A 551 SITE 2 AC2 6 HOH A 747 HOH A 987 CRYST1 80.520 84.150 161.190 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012419 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011884 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006204 0.00000