data_5VRF # _entry.id 5VRF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VRF pdb_00005vrf 10.2210/pdb5vrf/pdb WWPDB D_1000226318 ? ? EMDB EMD-8728 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-03-14 2 'Structure model' 1 1 2018-03-28 3 'Structure model' 1 2 2019-01-23 4 'Structure model' 1 3 2019-02-20 5 'Structure model' 1 4 2019-12-18 6 'Structure model' 1 5 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Refinement description' 6 4 'Structure model' 'Author supporting evidence' 7 4 'Structure model' 'Data collection' 8 5 'Structure model' 'Author supporting evidence' 9 5 'Structure model' Other 10 6 'Structure model' 'Data collection' 11 6 'Structure model' 'Database references' 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' cell 2 2 'Structure model' citation 3 3 'Structure model' em_3d_fitting_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' atom_sites 6 5 'Structure model' pdbx_audit_support 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond 9 6 'Structure model' database_2 10 6 'Structure model' em_3d_fitting_list 11 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_cell.Z_PDB' 2 2 'Structure model' '_cell.length_a' 3 2 'Structure model' '_cell.length_b' 4 2 'Structure model' '_cell.length_c' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 4 'Structure model' '_pdbx_audit_support.funding_organization' 9 5 'Structure model' '_atom_sites.fract_transf_matrix[1][1]' 10 5 'Structure model' '_atom_sites.fract_transf_matrix[2][2]' 11 5 'Structure model' '_atom_sites.fract_transf_matrix[3][3]' 12 5 'Structure model' '_pdbx_audit_support.funding_organization' 13 6 'Structure model' '_database_2.pdbx_DOI' 14 6 'Structure model' '_database_2.pdbx_database_accession' 15 6 'Structure model' '_em_3d_fitting_list.accession_code' 16 6 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 17 6 'Structure model' '_em_3d_fitting_list.source_name' 18 6 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VRF _pdbx_database_status.recvd_initial_deposition_date 2017-05-10 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type EMDB 'CryoEM Structure of the Zinc Transporter YiiP from helical crystals' EMD-8728 'associated EM volume' TargetTrack . TEMIMPS-GO.15206 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Coudray, N.' 1 ? 'Lopez-Redondo, M.' 2 ? 'Zhang, Z.' 3 ? 'Alexopoulos, J.' 4 ? 'Stokes, D.L.' 5 ? 'Transcontinental EM Initiative for Membrane Protein Structure (TEMIMPS)' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 115 _citation.language ? _citation.page_first 3042 _citation.page_last 3047 _citation.title 'Structural basis for the alternating access mechanism of the cation diffusion facilitator YiiP.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1715051115 _citation.pdbx_database_id_PubMed 29507252 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lopez-Redondo, M.L.' 1 ? primary 'Coudray, N.' 2 ? primary 'Zhang, Z.' 3 ? primary 'Alexopoulos, J.' 4 ? primary 'Stokes, D.L.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cadmium and zinc efflux pump FieF' 32485.211 2 ? ? ? ? 2 non-polymer man 'ZINC ION' 65.409 8 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MTQTSQYDFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKA EPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDL FLNAAVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQ AGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVEPTTQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MTQTSQYDFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKA EPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDL FLNAAVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQ AGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVEPTTQ ; _entity_poly.pdbx_strand_id B,A _entity_poly.pdbx_target_identifier TEMIMPS-GO.15206 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLN n 1 4 THR n 1 5 SER n 1 6 GLN n 1 7 TYR n 1 8 ASP n 1 9 PHE n 1 10 TRP n 1 11 VAL n 1 12 LYS n 1 13 LEU n 1 14 ALA n 1 15 SER n 1 16 ARG n 1 17 ALA n 1 18 SER n 1 19 VAL n 1 20 ALA n 1 21 THR n 1 22 ALA n 1 23 LEU n 1 24 THR n 1 25 LEU n 1 26 ILE n 1 27 THR n 1 28 ILE n 1 29 LYS n 1 30 LEU n 1 31 LEU n 1 32 ALA n 1 33 TRP n 1 34 LEU n 1 35 TYR n 1 36 SER n 1 37 GLY n 1 38 SER n 1 39 ALA n 1 40 SER n 1 41 MET n 1 42 LEU n 1 43 ALA n 1 44 SER n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 SER n 1 49 PHE n 1 50 ALA n 1 51 ASP n 1 52 THR n 1 53 LEU n 1 54 ALA n 1 55 SER n 1 56 ILE n 1 57 ILE n 1 58 ASN n 1 59 PHE n 1 60 ILE n 1 61 ALA n 1 62 ILE n 1 63 ARG n 1 64 TYR n 1 65 ALA n 1 66 ILE n 1 67 VAL n 1 68 PRO n 1 69 ALA n 1 70 ASP n 1 71 HIS n 1 72 ASP n 1 73 HIS n 1 74 ARG n 1 75 TYR n 1 76 GLY n 1 77 HIS n 1 78 GLY n 1 79 LYS n 1 80 ALA n 1 81 GLU n 1 82 PRO n 1 83 LEU n 1 84 ALA n 1 85 ALA n 1 86 LEU n 1 87 ALA n 1 88 GLN n 1 89 SER n 1 90 ALA n 1 91 PHE n 1 92 ILE n 1 93 MET n 1 94 GLY n 1 95 SER n 1 96 ALA n 1 97 PHE n 1 98 LEU n 1 99 LEU n 1 100 LEU n 1 101 PHE n 1 102 TYR n 1 103 GLY n 1 104 GLY n 1 105 GLU n 1 106 ARG n 1 107 LEU n 1 108 LEU n 1 109 ASN n 1 110 PRO n 1 111 SER n 1 112 PRO n 1 113 VAL n 1 114 GLU n 1 115 ASN n 1 116 ALA n 1 117 THR n 1 118 LEU n 1 119 GLY n 1 120 VAL n 1 121 VAL n 1 122 VAL n 1 123 SER n 1 124 VAL n 1 125 VAL n 1 126 ALA n 1 127 ILE n 1 128 VAL n 1 129 LEU n 1 130 THR n 1 131 LEU n 1 132 ALA n 1 133 LEU n 1 134 VAL n 1 135 LEU n 1 136 LEU n 1 137 GLN n 1 138 LYS n 1 139 ARG n 1 140 ALA n 1 141 LEU n 1 142 ALA n 1 143 ALA n 1 144 THR n 1 145 ASN n 1 146 SER n 1 147 THR n 1 148 VAL n 1 149 VAL n 1 150 GLU n 1 151 ALA n 1 152 ASP n 1 153 SER n 1 154 LEU n 1 155 HIS n 1 156 TYR n 1 157 LYS n 1 158 SER n 1 159 ASP n 1 160 LEU n 1 161 PHE n 1 162 LEU n 1 163 ASN n 1 164 ALA n 1 165 ALA n 1 166 VAL n 1 167 LEU n 1 168 LEU n 1 169 ALA n 1 170 LEU n 1 171 VAL n 1 172 LEU n 1 173 SER n 1 174 GLN n 1 175 TYR n 1 176 GLY n 1 177 TRP n 1 178 TRP n 1 179 TRP n 1 180 ALA n 1 181 ASP n 1 182 GLY n 1 183 LEU n 1 184 PHE n 1 185 ALA n 1 186 VAL n 1 187 LEU n 1 188 ILE n 1 189 ALA n 1 190 CYS n 1 191 TYR n 1 192 ILE n 1 193 GLY n 1 194 GLN n 1 195 GLN n 1 196 ALA n 1 197 PHE n 1 198 ASP n 1 199 LEU n 1 200 GLY n 1 201 TYR n 1 202 ARG n 1 203 SER n 1 204 ILE n 1 205 GLN n 1 206 ALA n 1 207 LEU n 1 208 LEU n 1 209 ASP n 1 210 ARG n 1 211 GLU n 1 212 LEU n 1 213 ASP n 1 214 GLU n 1 215 ASP n 1 216 THR n 1 217 ARG n 1 218 GLN n 1 219 ARG n 1 220 ILE n 1 221 LYS n 1 222 LEU n 1 223 ILE n 1 224 ALA n 1 225 LYS n 1 226 GLU n 1 227 ASP n 1 228 PRO n 1 229 ARG n 1 230 VAL n 1 231 LEU n 1 232 GLY n 1 233 LEU n 1 234 HIS n 1 235 ASP n 1 236 LEU n 1 237 ARG n 1 238 THR n 1 239 ARG n 1 240 GLN n 1 241 ALA n 1 242 GLY n 1 243 LYS n 1 244 THR n 1 245 VAL n 1 246 PHE n 1 247 ILE n 1 248 GLN n 1 249 PHE n 1 250 HIS n 1 251 LEU n 1 252 GLU n 1 253 LEU n 1 254 ASP n 1 255 GLY n 1 256 ASN n 1 257 LEU n 1 258 SER n 1 259 LEU n 1 260 ASN n 1 261 GLU n 1 262 ALA n 1 263 HIS n 1 264 SER n 1 265 ILE n 1 266 THR n 1 267 ASP n 1 268 THR n 1 269 THR n 1 270 GLY n 1 271 LEU n 1 272 ARG n 1 273 VAL n 1 274 LYS n 1 275 ALA n 1 276 ALA n 1 277 PHE n 1 278 GLU n 1 279 ASP n 1 280 ALA n 1 281 GLU n 1 282 VAL n 1 283 ILE n 1 284 ILE n 1 285 HIS n 1 286 GLN n 1 287 ASP n 1 288 PRO n 1 289 VAL n 1 290 GLN n 1 291 VAL n 1 292 GLU n 1 293 PRO n 1 294 THR n 1 295 THR n 1 296 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 296 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'fieF, SO_4475' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MR-1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Shewanella oneidensis MR-1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211586 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? B . n A 1 2 THR 2 2 ? ? ? B . n A 1 3 GLN 3 3 ? ? ? B . n A 1 4 THR 4 4 ? ? ? B . n A 1 5 SER 5 5 ? ? ? B . n A 1 6 GLN 6 6 ? ? ? B . n A 1 7 TYR 7 7 7 TYR TYR B . n A 1 8 ASP 8 8 8 ASP ASP B . n A 1 9 PHE 9 9 9 PHE PHE B . n A 1 10 TRP 10 10 10 TRP TRP B . n A 1 11 VAL 11 11 11 VAL VAL B . n A 1 12 LYS 12 12 12 LYS LYS B . n A 1 13 LEU 13 13 13 LEU LEU B . n A 1 14 ALA 14 14 14 ALA ALA B . n A 1 15 SER 15 15 15 SER SER B . n A 1 16 ARG 16 16 16 ARG ARG B . n A 1 17 ALA 17 17 17 ALA ALA B . n A 1 18 SER 18 18 18 SER SER B . n A 1 19 VAL 19 19 19 VAL VAL B . n A 1 20 ALA 20 20 20 ALA ALA B . n A 1 21 THR 21 21 21 THR THR B . n A 1 22 ALA 22 22 22 ALA ALA B . n A 1 23 LEU 23 23 23 LEU LEU B . n A 1 24 THR 24 24 24 THR THR B . n A 1 25 LEU 25 25 25 LEU LEU B . n A 1 26 ILE 26 26 26 ILE ILE B . n A 1 27 THR 27 27 27 THR THR B . n A 1 28 ILE 28 28 28 ILE ILE B . n A 1 29 LYS 29 29 29 LYS LYS B . n A 1 30 LEU 30 30 30 LEU LEU B . n A 1 31 LEU 31 31 31 LEU LEU B . n A 1 32 ALA 32 32 32 ALA ALA B . n A 1 33 TRP 33 33 33 TRP TRP B . n A 1 34 LEU 34 34 34 LEU LEU B . n A 1 35 TYR 35 35 35 TYR TYR B . n A 1 36 SER 36 36 36 SER SER B . n A 1 37 GLY 37 37 37 GLY GLY B . n A 1 38 SER 38 38 38 SER SER B . n A 1 39 ALA 39 39 39 ALA ALA B . n A 1 40 SER 40 40 40 SER SER B . n A 1 41 MET 41 41 41 MET MET B . n A 1 42 LEU 42 42 42 LEU LEU B . n A 1 43 ALA 43 43 43 ALA ALA B . n A 1 44 SER 44 44 44 SER SER B . n A 1 45 LEU 45 45 45 LEU LEU B . n A 1 46 THR 46 46 46 THR THR B . n A 1 47 ASP 47 47 47 ASP ASP B . n A 1 48 SER 48 48 48 SER SER B . n A 1 49 PHE 49 49 49 PHE PHE B . n A 1 50 ALA 50 50 50 ALA ALA B . n A 1 51 ASP 51 51 51 ASP ASP B . n A 1 52 THR 52 52 52 THR THR B . n A 1 53 LEU 53 53 53 LEU LEU B . n A 1 54 ALA 54 54 54 ALA ALA B . n A 1 55 SER 55 55 55 SER SER B . n A 1 56 ILE 56 56 56 ILE ILE B . n A 1 57 ILE 57 57 57 ILE ILE B . n A 1 58 ASN 58 58 58 ASN ASN B . n A 1 59 PHE 59 59 59 PHE PHE B . n A 1 60 ILE 60 60 60 ILE ILE B . n A 1 61 ALA 61 61 61 ALA ALA B . n A 1 62 ILE 62 62 62 ILE ILE B . n A 1 63 ARG 63 63 63 ARG ARG B . n A 1 64 TYR 64 64 64 TYR TYR B . n A 1 65 ALA 65 65 65 ALA ALA B . n A 1 66 ILE 66 66 66 ILE ILE B . n A 1 67 VAL 67 67 67 VAL VAL B . n A 1 68 PRO 68 68 68 PRO PRO B . n A 1 69 ALA 69 69 69 ALA ALA B . n A 1 70 ASP 70 70 70 ASP ASP B . n A 1 71 HIS 71 71 71 HIS HIS B . n A 1 72 ASP 72 72 72 ASP ASP B . n A 1 73 HIS 73 73 73 HIS HIS B . n A 1 74 ARG 74 74 74 ARG ARG B . n A 1 75 TYR 75 75 75 TYR TYR B . n A 1 76 GLY 76 76 76 GLY GLY B . n A 1 77 HIS 77 77 77 HIS HIS B . n A 1 78 GLY 78 78 78 GLY GLY B . n A 1 79 LYS 79 79 79 LYS LYS B . n A 1 80 ALA 80 80 80 ALA ALA B . n A 1 81 GLU 81 81 81 GLU GLU B . n A 1 82 PRO 82 82 82 PRO PRO B . n A 1 83 LEU 83 83 83 LEU LEU B . n A 1 84 ALA 84 84 84 ALA ALA B . n A 1 85 ALA 85 85 85 ALA ALA B . n A 1 86 LEU 86 86 86 LEU LEU B . n A 1 87 ALA 87 87 87 ALA ALA B . n A 1 88 GLN 88 88 88 GLN GLN B . n A 1 89 SER 89 89 89 SER SER B . n A 1 90 ALA 90 90 90 ALA ALA B . n A 1 91 PHE 91 91 91 PHE PHE B . n A 1 92 ILE 92 92 92 ILE ILE B . n A 1 93 MET 93 93 93 MET MET B . n A 1 94 GLY 94 94 94 GLY GLY B . n A 1 95 SER 95 95 95 SER SER B . n A 1 96 ALA 96 96 96 ALA ALA B . n A 1 97 PHE 97 97 97 PHE PHE B . n A 1 98 LEU 98 98 98 LEU LEU B . n A 1 99 LEU 99 99 99 LEU LEU B . n A 1 100 LEU 100 100 100 LEU LEU B . n A 1 101 PHE 101 101 101 PHE PHE B . n A 1 102 TYR 102 102 102 TYR TYR B . n A 1 103 GLY 103 103 103 GLY GLY B . n A 1 104 GLY 104 104 104 GLY GLY B . n A 1 105 GLU 105 105 105 GLU GLU B . n A 1 106 ARG 106 106 106 ARG ARG B . n A 1 107 LEU 107 107 107 LEU LEU B . n A 1 108 LEU 108 108 108 LEU LEU B . n A 1 109 ASN 109 109 109 ASN ASN B . n A 1 110 PRO 110 110 110 PRO PRO B . n A 1 111 SER 111 111 111 SER SER B . n A 1 112 PRO 112 112 112 PRO PRO B . n A 1 113 VAL 113 113 113 VAL VAL B . n A 1 114 GLU 114 114 114 GLU GLU B . n A 1 115 ASN 115 115 115 ASN ASN B . n A 1 116 ALA 116 116 116 ALA ALA B . n A 1 117 THR 117 117 117 THR THR B . n A 1 118 LEU 118 118 118 LEU LEU B . n A 1 119 GLY 119 119 119 GLY GLY B . n A 1 120 VAL 120 120 120 VAL VAL B . n A 1 121 VAL 121 121 121 VAL VAL B . n A 1 122 VAL 122 122 122 VAL VAL B . n A 1 123 SER 123 123 123 SER SER B . n A 1 124 VAL 124 124 124 VAL VAL B . n A 1 125 VAL 125 125 125 VAL VAL B . n A 1 126 ALA 126 126 126 ALA ALA B . n A 1 127 ILE 127 127 127 ILE ILE B . n A 1 128 VAL 128 128 128 VAL VAL B . n A 1 129 LEU 129 129 129 LEU LEU B . n A 1 130 THR 130 130 130 THR THR B . n A 1 131 LEU 131 131 131 LEU LEU B . n A 1 132 ALA 132 132 132 ALA ALA B . n A 1 133 LEU 133 133 133 LEU LEU B . n A 1 134 VAL 134 134 134 VAL VAL B . n A 1 135 LEU 135 135 135 LEU LEU B . n A 1 136 LEU 136 136 136 LEU LEU B . n A 1 137 GLN 137 137 137 GLN GLN B . n A 1 138 LYS 138 138 138 LYS LYS B . n A 1 139 ARG 139 139 139 ARG ARG B . n A 1 140 ALA 140 140 140 ALA ALA B . n A 1 141 LEU 141 141 141 LEU LEU B . n A 1 142 ALA 142 142 142 ALA ALA B . n A 1 143 ALA 143 143 143 ALA ALA B . n A 1 144 THR 144 144 144 THR THR B . n A 1 145 ASN 145 145 145 ASN ASN B . n A 1 146 SER 146 146 146 SER SER B . n A 1 147 THR 147 147 147 THR THR B . n A 1 148 VAL 148 148 148 VAL VAL B . n A 1 149 VAL 149 149 149 VAL VAL B . n A 1 150 GLU 150 150 150 GLU GLU B . n A 1 151 ALA 151 151 151 ALA ALA B . n A 1 152 ASP 152 152 152 ASP ASP B . n A 1 153 SER 153 153 153 SER SER B . n A 1 154 LEU 154 154 154 LEU LEU B . n A 1 155 HIS 155 155 155 HIS HIS B . n A 1 156 TYR 156 156 156 TYR TYR B . n A 1 157 LYS 157 157 157 LYS LYS B . n A 1 158 SER 158 158 158 SER SER B . n A 1 159 ASP 159 159 159 ASP ASP B . n A 1 160 LEU 160 160 160 LEU LEU B . n A 1 161 PHE 161 161 161 PHE PHE B . n A 1 162 LEU 162 162 162 LEU LEU B . n A 1 163 ASN 163 163 163 ASN ASN B . n A 1 164 ALA 164 164 164 ALA ALA B . n A 1 165 ALA 165 165 165 ALA ALA B . n A 1 166 VAL 166 166 166 VAL VAL B . n A 1 167 LEU 167 167 167 LEU LEU B . n A 1 168 LEU 168 168 168 LEU LEU B . n A 1 169 ALA 169 169 169 ALA ALA B . n A 1 170 LEU 170 170 170 LEU LEU B . n A 1 171 VAL 171 171 171 VAL VAL B . n A 1 172 LEU 172 172 172 LEU LEU B . n A 1 173 SER 173 173 173 SER SER B . n A 1 174 GLN 174 174 174 GLN GLN B . n A 1 175 TYR 175 175 175 TYR TYR B . n A 1 176 GLY 176 176 176 GLY GLY B . n A 1 177 TRP 177 177 177 TRP TRP B . n A 1 178 TRP 178 178 178 TRP TRP B . n A 1 179 TRP 179 179 179 TRP TRP B . n A 1 180 ALA 180 180 180 ALA ALA B . n A 1 181 ASP 181 181 181 ASP ASP B . n A 1 182 GLY 182 182 182 GLY GLY B . n A 1 183 LEU 183 183 183 LEU LEU B . n A 1 184 PHE 184 184 184 PHE PHE B . n A 1 185 ALA 185 185 185 ALA ALA B . n A 1 186 VAL 186 186 186 VAL VAL B . n A 1 187 LEU 187 187 187 LEU LEU B . n A 1 188 ILE 188 188 188 ILE ILE B . n A 1 189 ALA 189 189 189 ALA ALA B . n A 1 190 CYS 190 190 190 CYS CYS B . n A 1 191 TYR 191 191 191 TYR TYR B . n A 1 192 ILE 192 192 192 ILE ILE B . n A 1 193 GLY 193 193 193 GLY GLY B . n A 1 194 GLN 194 194 194 GLN GLN B . n A 1 195 GLN 195 195 195 GLN GLN B . n A 1 196 ALA 196 196 196 ALA ALA B . n A 1 197 PHE 197 197 197 PHE PHE B . n A 1 198 ASP 198 198 198 ASP ASP B . n A 1 199 LEU 199 199 199 LEU LEU B . n A 1 200 GLY 200 200 200 GLY GLY B . n A 1 201 TYR 201 201 201 TYR TYR B . n A 1 202 ARG 202 202 202 ARG ARG B . n A 1 203 SER 203 203 203 SER SER B . n A 1 204 ILE 204 204 204 ILE ILE B . n A 1 205 GLN 205 205 205 GLN GLN B . n A 1 206 ALA 206 206 206 ALA ALA B . n A 1 207 LEU 207 207 207 LEU LEU B . n A 1 208 LEU 208 208 208 LEU LEU B . n A 1 209 ASP 209 209 209 ASP ASP B . n A 1 210 ARG 210 210 210 ARG ARG B . n A 1 211 GLU 211 211 211 GLU GLU B . n A 1 212 LEU 212 212 212 LEU LEU B . n A 1 213 ASP 213 213 213 ASP ASP B . n A 1 214 GLU 214 214 214 GLU GLU B . n A 1 215 ASP 215 215 215 ASP ASP B . n A 1 216 THR 216 216 216 THR THR B . n A 1 217 ARG 217 217 217 ARG ARG B . n A 1 218 GLN 218 218 218 GLN GLN B . n A 1 219 ARG 219 219 219 ARG ARG B . n A 1 220 ILE 220 220 220 ILE ILE B . n A 1 221 LYS 221 221 221 LYS LYS B . n A 1 222 LEU 222 222 222 LEU LEU B . n A 1 223 ILE 223 223 223 ILE ILE B . n A 1 224 ALA 224 224 224 ALA ALA B . n A 1 225 LYS 225 225 225 LYS LYS B . n A 1 226 GLU 226 226 226 GLU GLU B . n A 1 227 ASP 227 227 227 ASP ASP B . n A 1 228 PRO 228 228 228 PRO PRO B . n A 1 229 ARG 229 229 229 ARG ARG B . n A 1 230 VAL 230 230 230 VAL VAL B . n A 1 231 LEU 231 231 231 LEU LEU B . n A 1 232 GLY 232 232 232 GLY GLY B . n A 1 233 LEU 233 233 233 LEU LEU B . n A 1 234 HIS 234 234 234 HIS HIS B . n A 1 235 ASP 235 235 235 ASP ASP B . n A 1 236 LEU 236 236 236 LEU LEU B . n A 1 237 ARG 237 237 237 ARG ARG B . n A 1 238 THR 238 238 238 THR THR B . n A 1 239 ARG 239 239 239 ARG ARG B . n A 1 240 GLN 240 240 240 GLN GLN B . n A 1 241 ALA 241 241 241 ALA ALA B . n A 1 242 GLY 242 242 242 GLY GLY B . n A 1 243 LYS 243 243 243 LYS LYS B . n A 1 244 THR 244 244 244 THR THR B . n A 1 245 VAL 245 245 245 VAL VAL B . n A 1 246 PHE 246 246 246 PHE PHE B . n A 1 247 ILE 247 247 247 ILE ILE B . n A 1 248 GLN 248 248 248 GLN GLN B . n A 1 249 PHE 249 249 249 PHE PHE B . n A 1 250 HIS 250 250 250 HIS HIS B . n A 1 251 LEU 251 251 251 LEU LEU B . n A 1 252 GLU 252 252 252 GLU GLU B . n A 1 253 LEU 253 253 253 LEU LEU B . n A 1 254 ASP 254 254 254 ASP ASP B . n A 1 255 GLY 255 255 255 GLY GLY B . n A 1 256 ASN 256 256 256 ASN ASN B . n A 1 257 LEU 257 257 257 LEU LEU B . n A 1 258 SER 258 258 258 SER SER B . n A 1 259 LEU 259 259 259 LEU LEU B . n A 1 260 ASN 260 260 260 ASN ASN B . n A 1 261 GLU 261 261 261 GLU GLU B . n A 1 262 ALA 262 262 262 ALA ALA B . n A 1 263 HIS 263 263 263 HIS HIS B . n A 1 264 SER 264 264 264 SER SER B . n A 1 265 ILE 265 265 265 ILE ILE B . n A 1 266 THR 266 266 266 THR THR B . n A 1 267 ASP 267 267 267 ASP ASP B . n A 1 268 THR 268 268 268 THR THR B . n A 1 269 THR 269 269 269 THR THR B . n A 1 270 GLY 270 270 270 GLY GLY B . n A 1 271 LEU 271 271 271 LEU LEU B . n A 1 272 ARG 272 272 272 ARG ARG B . n A 1 273 VAL 273 273 273 VAL VAL B . n A 1 274 LYS 274 274 274 LYS LYS B . n A 1 275 ALA 275 275 275 ALA ALA B . n A 1 276 ALA 276 276 276 ALA ALA B . n A 1 277 PHE 277 277 277 PHE PHE B . n A 1 278 GLU 278 278 278 GLU GLU B . n A 1 279 ASP 279 279 279 ASP ASP B . n A 1 280 ALA 280 280 280 ALA ALA B . n A 1 281 GLU 281 281 281 GLU GLU B . n A 1 282 VAL 282 282 282 VAL VAL B . n A 1 283 ILE 283 283 283 ILE ILE B . n A 1 284 ILE 284 284 284 ILE ILE B . n A 1 285 HIS 285 285 285 HIS HIS B . n A 1 286 GLN 286 286 286 GLN GLN B . n A 1 287 ASP 287 287 287 ASP ASP B . n A 1 288 PRO 288 288 288 PRO PRO B . n A 1 289 VAL 289 289 ? ? ? B . n A 1 290 GLN 290 290 ? ? ? B . n A 1 291 VAL 291 291 ? ? ? B . n A 1 292 GLU 292 292 ? ? ? B . n A 1 293 PRO 293 293 ? ? ? B . n A 1 294 THR 294 294 ? ? ? B . n A 1 295 THR 295 295 ? ? ? B . n A 1 296 GLN 296 296 ? ? ? B . n B 1 1 MET 1 1 ? ? ? A . n B 1 2 THR 2 2 ? ? ? A . n B 1 3 GLN 3 3 ? ? ? A . n B 1 4 THR 4 4 ? ? ? A . n B 1 5 SER 5 5 ? ? ? A . n B 1 6 GLN 6 6 ? ? ? A . n B 1 7 TYR 7 7 7 TYR TYR A . n B 1 8 ASP 8 8 8 ASP ASP A . n B 1 9 PHE 9 9 9 PHE PHE A . n B 1 10 TRP 10 10 10 TRP TRP A . n B 1 11 VAL 11 11 11 VAL VAL A . n B 1 12 LYS 12 12 12 LYS LYS A . n B 1 13 LEU 13 13 13 LEU LEU A . n B 1 14 ALA 14 14 14 ALA ALA A . n B 1 15 SER 15 15 15 SER SER A . n B 1 16 ARG 16 16 16 ARG ARG A . n B 1 17 ALA 17 17 17 ALA ALA A . n B 1 18 SER 18 18 18 SER SER A . n B 1 19 VAL 19 19 19 VAL VAL A . n B 1 20 ALA 20 20 20 ALA ALA A . n B 1 21 THR 21 21 21 THR THR A . n B 1 22 ALA 22 22 22 ALA ALA A . n B 1 23 LEU 23 23 23 LEU LEU A . n B 1 24 THR 24 24 24 THR THR A . n B 1 25 LEU 25 25 25 LEU LEU A . n B 1 26 ILE 26 26 26 ILE ILE A . n B 1 27 THR 27 27 27 THR THR A . n B 1 28 ILE 28 28 28 ILE ILE A . n B 1 29 LYS 29 29 29 LYS LYS A . n B 1 30 LEU 30 30 30 LEU LEU A . n B 1 31 LEU 31 31 31 LEU LEU A . n B 1 32 ALA 32 32 32 ALA ALA A . n B 1 33 TRP 33 33 33 TRP TRP A . n B 1 34 LEU 34 34 34 LEU LEU A . n B 1 35 TYR 35 35 35 TYR TYR A . n B 1 36 SER 36 36 36 SER SER A . n B 1 37 GLY 37 37 37 GLY GLY A . n B 1 38 SER 38 38 38 SER SER A . n B 1 39 ALA 39 39 39 ALA ALA A . n B 1 40 SER 40 40 40 SER SER A . n B 1 41 MET 41 41 41 MET MET A . n B 1 42 LEU 42 42 42 LEU LEU A . n B 1 43 ALA 43 43 43 ALA ALA A . n B 1 44 SER 44 44 44 SER SER A . n B 1 45 LEU 45 45 45 LEU LEU A . n B 1 46 THR 46 46 46 THR THR A . n B 1 47 ASP 47 47 47 ASP ASP A . n B 1 48 SER 48 48 48 SER SER A . n B 1 49 PHE 49 49 49 PHE PHE A . n B 1 50 ALA 50 50 50 ALA ALA A . n B 1 51 ASP 51 51 51 ASP ASP A . n B 1 52 THR 52 52 52 THR THR A . n B 1 53 LEU 53 53 53 LEU LEU A . n B 1 54 ALA 54 54 54 ALA ALA A . n B 1 55 SER 55 55 55 SER SER A . n B 1 56 ILE 56 56 56 ILE ILE A . n B 1 57 ILE 57 57 57 ILE ILE A . n B 1 58 ASN 58 58 58 ASN ASN A . n B 1 59 PHE 59 59 59 PHE PHE A . n B 1 60 ILE 60 60 60 ILE ILE A . n B 1 61 ALA 61 61 61 ALA ALA A . n B 1 62 ILE 62 62 62 ILE ILE A . n B 1 63 ARG 63 63 63 ARG ARG A . n B 1 64 TYR 64 64 64 TYR TYR A . n B 1 65 ALA 65 65 65 ALA ALA A . n B 1 66 ILE 66 66 66 ILE ILE A . n B 1 67 VAL 67 67 67 VAL VAL A . n B 1 68 PRO 68 68 68 PRO PRO A . n B 1 69 ALA 69 69 69 ALA ALA A . n B 1 70 ASP 70 70 70 ASP ASP A . n B 1 71 HIS 71 71 71 HIS HIS A . n B 1 72 ASP 72 72 72 ASP ASP A . n B 1 73 HIS 73 73 73 HIS HIS A . n B 1 74 ARG 74 74 74 ARG ARG A . n B 1 75 TYR 75 75 75 TYR TYR A . n B 1 76 GLY 76 76 76 GLY GLY A . n B 1 77 HIS 77 77 77 HIS HIS A . n B 1 78 GLY 78 78 78 GLY GLY A . n B 1 79 LYS 79 79 79 LYS LYS A . n B 1 80 ALA 80 80 80 ALA ALA A . n B 1 81 GLU 81 81 81 GLU GLU A . n B 1 82 PRO 82 82 82 PRO PRO A . n B 1 83 LEU 83 83 83 LEU LEU A . n B 1 84 ALA 84 84 84 ALA ALA A . n B 1 85 ALA 85 85 85 ALA ALA A . n B 1 86 LEU 86 86 86 LEU LEU A . n B 1 87 ALA 87 87 87 ALA ALA A . n B 1 88 GLN 88 88 88 GLN GLN A . n B 1 89 SER 89 89 89 SER SER A . n B 1 90 ALA 90 90 90 ALA ALA A . n B 1 91 PHE 91 91 91 PHE PHE A . n B 1 92 ILE 92 92 92 ILE ILE A . n B 1 93 MET 93 93 93 MET MET A . n B 1 94 GLY 94 94 94 GLY GLY A . n B 1 95 SER 95 95 95 SER SER A . n B 1 96 ALA 96 96 96 ALA ALA A . n B 1 97 PHE 97 97 97 PHE PHE A . n B 1 98 LEU 98 98 98 LEU LEU A . n B 1 99 LEU 99 99 99 LEU LEU A . n B 1 100 LEU 100 100 100 LEU LEU A . n B 1 101 PHE 101 101 101 PHE PHE A . n B 1 102 TYR 102 102 102 TYR TYR A . n B 1 103 GLY 103 103 103 GLY GLY A . n B 1 104 GLY 104 104 104 GLY GLY A . n B 1 105 GLU 105 105 105 GLU GLU A . n B 1 106 ARG 106 106 106 ARG ARG A . n B 1 107 LEU 107 107 107 LEU LEU A . n B 1 108 LEU 108 108 108 LEU LEU A . n B 1 109 ASN 109 109 109 ASN ASN A . n B 1 110 PRO 110 110 110 PRO PRO A . n B 1 111 SER 111 111 111 SER SER A . n B 1 112 PRO 112 112 112 PRO PRO A . n B 1 113 VAL 113 113 113 VAL VAL A . n B 1 114 GLU 114 114 114 GLU GLU A . n B 1 115 ASN 115 115 115 ASN ASN A . n B 1 116 ALA 116 116 116 ALA ALA A . n B 1 117 THR 117 117 117 THR THR A . n B 1 118 LEU 118 118 118 LEU LEU A . n B 1 119 GLY 119 119 119 GLY GLY A . n B 1 120 VAL 120 120 120 VAL VAL A . n B 1 121 VAL 121 121 121 VAL VAL A . n B 1 122 VAL 122 122 122 VAL VAL A . n B 1 123 SER 123 123 123 SER SER A . n B 1 124 VAL 124 124 124 VAL VAL A . n B 1 125 VAL 125 125 125 VAL VAL A . n B 1 126 ALA 126 126 126 ALA ALA A . n B 1 127 ILE 127 127 127 ILE ILE A . n B 1 128 VAL 128 128 128 VAL VAL A . n B 1 129 LEU 129 129 129 LEU LEU A . n B 1 130 THR 130 130 130 THR THR A . n B 1 131 LEU 131 131 131 LEU LEU A . n B 1 132 ALA 132 132 132 ALA ALA A . n B 1 133 LEU 133 133 133 LEU LEU A . n B 1 134 VAL 134 134 134 VAL VAL A . n B 1 135 LEU 135 135 135 LEU LEU A . n B 1 136 LEU 136 136 136 LEU LEU A . n B 1 137 GLN 137 137 137 GLN GLN A . n B 1 138 LYS 138 138 138 LYS LYS A . n B 1 139 ARG 139 139 139 ARG ARG A . n B 1 140 ALA 140 140 140 ALA ALA A . n B 1 141 LEU 141 141 141 LEU LEU A . n B 1 142 ALA 142 142 142 ALA ALA A . n B 1 143 ALA 143 143 143 ALA ALA A . n B 1 144 THR 144 144 144 THR THR A . n B 1 145 ASN 145 145 145 ASN ASN A . n B 1 146 SER 146 146 146 SER SER A . n B 1 147 THR 147 147 147 THR THR A . n B 1 148 VAL 148 148 148 VAL VAL A . n B 1 149 VAL 149 149 149 VAL VAL A . n B 1 150 GLU 150 150 150 GLU GLU A . n B 1 151 ALA 151 151 151 ALA ALA A . n B 1 152 ASP 152 152 152 ASP ASP A . n B 1 153 SER 153 153 153 SER SER A . n B 1 154 LEU 154 154 154 LEU LEU A . n B 1 155 HIS 155 155 155 HIS HIS A . n B 1 156 TYR 156 156 156 TYR TYR A . n B 1 157 LYS 157 157 157 LYS LYS A . n B 1 158 SER 158 158 158 SER SER A . n B 1 159 ASP 159 159 159 ASP ASP A . n B 1 160 LEU 160 160 160 LEU LEU A . n B 1 161 PHE 161 161 161 PHE PHE A . n B 1 162 LEU 162 162 162 LEU LEU A . n B 1 163 ASN 163 163 163 ASN ASN A . n B 1 164 ALA 164 164 164 ALA ALA A . n B 1 165 ALA 165 165 165 ALA ALA A . n B 1 166 VAL 166 166 166 VAL VAL A . n B 1 167 LEU 167 167 167 LEU LEU A . n B 1 168 LEU 168 168 168 LEU LEU A . n B 1 169 ALA 169 169 169 ALA ALA A . n B 1 170 LEU 170 170 170 LEU LEU A . n B 1 171 VAL 171 171 171 VAL VAL A . n B 1 172 LEU 172 172 172 LEU LEU A . n B 1 173 SER 173 173 173 SER SER A . n B 1 174 GLN 174 174 174 GLN GLN A . n B 1 175 TYR 175 175 175 TYR TYR A . n B 1 176 GLY 176 176 176 GLY GLY A . n B 1 177 TRP 177 177 177 TRP TRP A . n B 1 178 TRP 178 178 178 TRP TRP A . n B 1 179 TRP 179 179 179 TRP TRP A . n B 1 180 ALA 180 180 180 ALA ALA A . n B 1 181 ASP 181 181 181 ASP ASP A . n B 1 182 GLY 182 182 182 GLY GLY A . n B 1 183 LEU 183 183 183 LEU LEU A . n B 1 184 PHE 184 184 184 PHE PHE A . n B 1 185 ALA 185 185 185 ALA ALA A . n B 1 186 VAL 186 186 186 VAL VAL A . n B 1 187 LEU 187 187 187 LEU LEU A . n B 1 188 ILE 188 188 188 ILE ILE A . n B 1 189 ALA 189 189 189 ALA ALA A . n B 1 190 CYS 190 190 190 CYS CYS A . n B 1 191 TYR 191 191 191 TYR TYR A . n B 1 192 ILE 192 192 192 ILE ILE A . n B 1 193 GLY 193 193 193 GLY GLY A . n B 1 194 GLN 194 194 194 GLN GLN A . n B 1 195 GLN 195 195 195 GLN GLN A . n B 1 196 ALA 196 196 196 ALA ALA A . n B 1 197 PHE 197 197 197 PHE PHE A . n B 1 198 ASP 198 198 198 ASP ASP A . n B 1 199 LEU 199 199 199 LEU LEU A . n B 1 200 GLY 200 200 200 GLY GLY A . n B 1 201 TYR 201 201 201 TYR TYR A . n B 1 202 ARG 202 202 202 ARG ARG A . n B 1 203 SER 203 203 203 SER SER A . n B 1 204 ILE 204 204 204 ILE ILE A . n B 1 205 GLN 205 205 205 GLN GLN A . n B 1 206 ALA 206 206 206 ALA ALA A . n B 1 207 LEU 207 207 207 LEU LEU A . n B 1 208 LEU 208 208 208 LEU LEU A . n B 1 209 ASP 209 209 209 ASP ASP A . n B 1 210 ARG 210 210 210 ARG ARG A . n B 1 211 GLU 211 211 211 GLU GLU A . n B 1 212 LEU 212 212 212 LEU LEU A . n B 1 213 ASP 213 213 213 ASP ASP A . n B 1 214 GLU 214 214 214 GLU GLU A . n B 1 215 ASP 215 215 215 ASP ASP A . n B 1 216 THR 216 216 216 THR THR A . n B 1 217 ARG 217 217 217 ARG ARG A . n B 1 218 GLN 218 218 218 GLN GLN A . n B 1 219 ARG 219 219 219 ARG ARG A . n B 1 220 ILE 220 220 220 ILE ILE A . n B 1 221 LYS 221 221 221 LYS LYS A . n B 1 222 LEU 222 222 222 LEU LEU A . n B 1 223 ILE 223 223 223 ILE ILE A . n B 1 224 ALA 224 224 224 ALA ALA A . n B 1 225 LYS 225 225 225 LYS LYS A . n B 1 226 GLU 226 226 226 GLU GLU A . n B 1 227 ASP 227 227 227 ASP ASP A . n B 1 228 PRO 228 228 228 PRO PRO A . n B 1 229 ARG 229 229 229 ARG ARG A . n B 1 230 VAL 230 230 230 VAL VAL A . n B 1 231 LEU 231 231 231 LEU LEU A . n B 1 232 GLY 232 232 232 GLY GLY A . n B 1 233 LEU 233 233 233 LEU LEU A . n B 1 234 HIS 234 234 234 HIS HIS A . n B 1 235 ASP 235 235 235 ASP ASP A . n B 1 236 LEU 236 236 236 LEU LEU A . n B 1 237 ARG 237 237 237 ARG ARG A . n B 1 238 THR 238 238 238 THR THR A . n B 1 239 ARG 239 239 239 ARG ARG A . n B 1 240 GLN 240 240 240 GLN GLN A . n B 1 241 ALA 241 241 241 ALA ALA A . n B 1 242 GLY 242 242 242 GLY GLY A . n B 1 243 LYS 243 243 243 LYS LYS A . n B 1 244 THR 244 244 244 THR THR A . n B 1 245 VAL 245 245 245 VAL VAL A . n B 1 246 PHE 246 246 246 PHE PHE A . n B 1 247 ILE 247 247 247 ILE ILE A . n B 1 248 GLN 248 248 248 GLN GLN A . n B 1 249 PHE 249 249 249 PHE PHE A . n B 1 250 HIS 250 250 250 HIS HIS A . n B 1 251 LEU 251 251 251 LEU LEU A . n B 1 252 GLU 252 252 252 GLU GLU A . n B 1 253 LEU 253 253 253 LEU LEU A . n B 1 254 ASP 254 254 254 ASP ASP A . n B 1 255 GLY 255 255 255 GLY GLY A . n B 1 256 ASN 256 256 256 ASN ASN A . n B 1 257 LEU 257 257 257 LEU LEU A . n B 1 258 SER 258 258 258 SER SER A . n B 1 259 LEU 259 259 259 LEU LEU A . n B 1 260 ASN 260 260 260 ASN ASN A . n B 1 261 GLU 261 261 261 GLU GLU A . n B 1 262 ALA 262 262 262 ALA ALA A . n B 1 263 HIS 263 263 263 HIS HIS A . n B 1 264 SER 264 264 264 SER SER A . n B 1 265 ILE 265 265 265 ILE ILE A . n B 1 266 THR 266 266 266 THR THR A . n B 1 267 ASP 267 267 267 ASP ASP A . n B 1 268 THR 268 268 268 THR THR A . n B 1 269 THR 269 269 269 THR THR A . n B 1 270 GLY 270 270 270 GLY GLY A . n B 1 271 LEU 271 271 271 LEU LEU A . n B 1 272 ARG 272 272 272 ARG ARG A . n B 1 273 VAL 273 273 273 VAL VAL A . n B 1 274 LYS 274 274 274 LYS LYS A . n B 1 275 ALA 275 275 275 ALA ALA A . n B 1 276 ALA 276 276 276 ALA ALA A . n B 1 277 PHE 277 277 277 PHE PHE A . n B 1 278 GLU 278 278 278 GLU GLU A . n B 1 279 ASP 279 279 279 ASP ASP A . n B 1 280 ALA 280 280 280 ALA ALA A . n B 1 281 GLU 281 281 281 GLU GLU A . n B 1 282 VAL 282 282 282 VAL VAL A . n B 1 283 ILE 283 283 283 ILE ILE A . n B 1 284 ILE 284 284 284 ILE ILE A . n B 1 285 HIS 285 285 285 HIS HIS A . n B 1 286 GLN 286 286 286 GLN GLN A . n B 1 287 ASP 287 287 287 ASP ASP A . n B 1 288 PRO 288 288 288 PRO PRO A . n B 1 289 VAL 289 289 ? ? ? A . n B 1 290 GLN 290 290 ? ? ? A . n B 1 291 VAL 291 291 ? ? ? A . n B 1 292 GLU 292 292 ? ? ? A . n B 1 293 PRO 293 293 ? ? ? A . n B 1 294 THR 294 294 ? ? ? A . n B 1 295 THR 295 295 ? ? ? A . n B 1 296 GLN 296 296 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN 1 301 301 ZN ZN B . D 2 ZN 1 302 302 ZN ZN B . E 2 ZN 1 303 303 ZN ZN B . F 2 ZN 1 304 304 ZN ZN B . G 2 ZN 1 303 303 ZN ZN A . H 2 ZN 1 301 301 ZN ZN A . I 2 ZN 1 302 302 ZN ZN A . J 2 ZN 1 304 304 ZN ZN A . # _software.citation_id ? _software.classification refinement _software.compiler_name ? _software.compiler_version ? _software.contact_author ? _software.contact_author_email ? _software.date ? _software.description ? _software.dependencies ? _software.hardware ? _software.language ? _software.location ? _software.mods ? _software.name PHENIX _software.os ? _software.os_version ? _software.type ? _software.version 1.11.1_2575: _software.pdbx_ordinal 1 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5VRF _cell.details ? _cell.formula_units_Z ? _cell.length_a 1 _cell.length_a_esd ? _cell.length_b 1 _cell.length_b_esd ? _cell.length_c 1 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 1 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VRF _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VRF _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VRF _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.011 ? ? 4458 'ELECTRON MICROSCOPY' ? f_angle_d 1.274 ? ? 6074 'ELECTRON MICROSCOPY' ? f_dihedral_angle_d 3.765 ? ? 2622 'ELECTRON MICROSCOPY' ? f_chiral_restr 0.056 ? ? 730 'ELECTRON MICROSCOPY' ? f_plane_restr 0.008 ? ? 760 'ELECTRON MICROSCOPY' ? # _struct.entry_id 5VRF _struct.title 'CryoEM Structure of the Zinc Transporter YiiP from helical crystals' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VRF _struct_keywords.text ;zinc antiporter, membrane protein, cation diffusion facilitator, metal transport, helical crystals, Structural Genomics, PSI-Biology, Transcontinental EM Initiative for Membrane Protein Structure, TEMIMPS ; _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8E919_SHEON _struct_ref.pdbx_db_accession Q8E919 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MTQTSQYDFWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKA EPLAALAQSAFIMGSAFLLLFYGGERLLNPSPVENATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDL FLNAAVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKEDPRVLGLHDLRTRQ AGKTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQVEPTTQ ; _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VRF B 1 ? 296 ? Q8E919 1 ? 296 ? 1 296 2 1 5VRF A 1 ? 296 ? Q8E919 1 ? 296 ? 1 296 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5350 ? 1 MORE -249 ? 1 'SSA (A^2)' 31850 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PHE A 9 ? GLY A 37 ? PHE B 9 GLY B 37 1 ? 29 HELX_P HELX_P2 AA2 SER A 38 ? ILE A 66 ? SER B 38 ILE B 66 1 ? 29 HELX_P HELX_P3 AA3 LYS A 79 ? ASN A 109 ? LYS B 79 ASN B 109 1 ? 31 HELX_P HELX_P4 AA4 ASN A 115 ? ALA A 142 ? ASN B 115 ALA B 142 1 ? 28 HELX_P HELX_P5 AA5 VAL A 149 ? GLN A 174 ? VAL B 149 GLN B 174 1 ? 26 HELX_P HELX_P6 AA6 TRP A 178 ? LEU A 208 ? TRP B 178 LEU B 208 1 ? 31 HELX_P HELX_P7 AA7 ASP A 213 ? GLU A 226 ? ASP B 213 GLU B 226 1 ? 14 HELX_P HELX_P8 AA8 SER A 258 ? PHE A 277 ? SER B 258 PHE B 277 1 ? 20 HELX_P HELX_P9 AA9 PHE B 9 ? GLY B 37 ? PHE A 9 GLY A 37 1 ? 29 HELX_P HELX_P10 AB1 SER B 38 ? ILE B 66 ? SER A 38 ILE A 66 1 ? 29 HELX_P HELX_P11 AB2 LYS B 79 ? ASN B 109 ? LYS A 79 ASN A 109 1 ? 31 HELX_P HELX_P12 AB3 ASN B 115 ? ALA B 142 ? ASN A 115 ALA A 142 1 ? 28 HELX_P HELX_P13 AB4 VAL B 149 ? GLN B 174 ? VAL A 149 GLN A 174 1 ? 26 HELX_P HELX_P14 AB5 TRP B 178 ? LEU B 208 ? TRP A 178 LEU A 208 1 ? 31 HELX_P HELX_P15 AB6 ASP B 213 ? GLU B 226 ? ASP A 213 GLU A 226 1 ? 14 HELX_P HELX_P16 AB7 SER B 258 ? PHE B 277 ? SER A 258 PHE A 277 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 47 OD2 ? ? ? 1_555 C ZN . ZN ? ? B ASP 47 B ZN 301 1_555 ? ? ? ? ? ? ? 2.067 ? ? metalc2 metalc ? ? A ASP 51 OD1 ? ? ? 1_555 C ZN . ZN ? ? B ASP 51 B ZN 301 1_555 ? ? ? ? ? ? ? 2.623 ? ? metalc3 metalc ? ? A ASP 51 OD2 ? ? ? 1_555 C ZN . ZN ? ? B ASP 51 B ZN 301 1_555 ? ? ? ? ? ? ? 2.114 ? ? metalc4 metalc ? ? A ASP 70 OD2 ? ? ? 1_555 D ZN . ZN ? ? B ASP 70 B ZN 302 1_555 ? ? ? ? ? ? ? 2.252 ? ? metalc5 metalc ? ? A HIS 73 ND1 ? ? ? 1_555 D ZN . ZN ? ? B HIS 73 B ZN 302 1_555 ? ? ? ? ? ? ? 2.432 ? ? metalc6 metalc ? ? A HIS 77 NE2 ? ? ? 1_555 D ZN . ZN ? ? B HIS 77 B ZN 302 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc7 metalc ? ? A HIS 155 NE2 ? ? ? 1_555 C ZN . ZN ? ? B HIS 155 B ZN 301 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc8 metalc ? ? A ASP 159 OD2 ? ? ? 1_555 C ZN . ZN ? ? B ASP 159 B ZN 301 1_555 ? ? ? ? ? ? ? 2.479 ? ? metalc9 metalc ? ? A HIS 234 NE2 ? ? ? 1_555 F ZN . ZN ? ? B HIS 234 B ZN 304 1_555 ? ? ? ? ? ? ? 2.164 ? ? metalc10 metalc ? ? A HIS 250 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 250 B ZN 304 1_555 ? ? ? ? ? ? ? 2.255 ? ? metalc11 metalc ? ? A HIS 263 NE2 ? ? ? 1_555 G ZN . ZN ? ? B HIS 263 A ZN 303 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc12 metalc ? ? A HIS 285 NE2 ? ? ? 1_555 E ZN . ZN ? ? B HIS 285 B ZN 303 1_555 ? ? ? ? ? ? ? 2.459 ? ? metalc13 metalc ? ? A ASP 287 OD1 ? ? ? 1_555 E ZN . ZN ? ? B ASP 287 B ZN 303 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc14 metalc ? ? A ASP 287 OD2 ? ? ? 1_555 F ZN . ZN ? ? B ASP 287 B ZN 304 1_555 ? ? ? ? ? ? ? 2.020 ? ? metalc15 metalc ? ? E ZN . ZN ? ? ? 1_555 B HIS 263 NE2 ? ? B ZN 303 A HIS 263 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc16 metalc ? ? B ASP 47 OD2 ? ? ? 1_555 H ZN . ZN ? ? A ASP 47 A ZN 301 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc17 metalc ? ? B ASP 51 OD1 ? ? ? 1_555 H ZN . ZN ? ? A ASP 51 A ZN 301 1_555 ? ? ? ? ? ? ? 2.627 ? ? metalc18 metalc ? ? B ASP 51 OD2 ? ? ? 1_555 H ZN . ZN ? ? A ASP 51 A ZN 301 1_555 ? ? ? ? ? ? ? 2.131 ? ? metalc19 metalc ? ? B ASP 70 OD2 ? ? ? 1_555 I ZN . ZN ? ? A ASP 70 A ZN 302 1_555 ? ? ? ? ? ? ? 2.435 ? ? metalc20 metalc ? ? B HIS 73 ND1 ? ? ? 1_555 I ZN . ZN ? ? A HIS 73 A ZN 302 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc21 metalc ? ? B HIS 77 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 77 A ZN 302 1_555 ? ? ? ? ? ? ? 2.335 ? ? metalc22 metalc ? ? B HIS 155 NE2 ? ? ? 1_555 H ZN . ZN ? ? A HIS 155 A ZN 301 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc23 metalc ? ? B ASP 159 OD2 ? ? ? 1_555 H ZN . ZN ? ? A ASP 159 A ZN 301 1_555 ? ? ? ? ? ? ? 2.514 ? ? metalc24 metalc ? ? B HIS 234 NE2 ? ? ? 1_555 J ZN . ZN ? ? A HIS 234 A ZN 304 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc25 metalc ? ? B HIS 250 ND1 ? ? ? 1_555 J ZN . ZN ? ? A HIS 250 A ZN 304 1_555 ? ? ? ? ? ? ? 2.355 ? ? metalc26 metalc ? ? B HIS 285 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 285 A ZN 303 1_555 ? ? ? ? ? ? ? 2.300 ? ? metalc27 metalc ? ? B ASP 287 OD1 ? ? ? 1_555 G ZN . ZN ? ? A ASP 287 A ZN 303 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc28 metalc ? ? B ASP 287 OD2 ? ? ? 1_555 J ZN . ZN ? ? A ASP 287 A ZN 304 1_555 ? ? ? ? ? ? ? 1.994 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 47 ? B ASP 47 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD1 ? A ASP 51 ? B ASP 51 ? 1_555 133.9 ? 2 OD2 ? A ASP 47 ? B ASP 47 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 51 ? B ASP 51 ? 1_555 97.7 ? 3 OD1 ? A ASP 51 ? B ASP 51 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 51 ? B ASP 51 ? 1_555 53.9 ? 4 OD2 ? A ASP 47 ? B ASP 47 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 155 ? B HIS 155 ? 1_555 155.2 ? 5 OD1 ? A ASP 51 ? B ASP 51 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 155 ? B HIS 155 ? 1_555 61.1 ? 6 OD2 ? A ASP 51 ? B ASP 51 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 NE2 ? A HIS 155 ? B HIS 155 ? 1_555 106.2 ? 7 OD2 ? A ASP 47 ? B ASP 47 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 159 ? B ASP 159 ? 1_555 107.5 ? 8 OD1 ? A ASP 51 ? B ASP 51 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 159 ? B ASP 159 ? 1_555 105.0 ? 9 OD2 ? A ASP 51 ? B ASP 51 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 159 ? B ASP 159 ? 1_555 84.6 ? 10 NE2 ? A HIS 155 ? B HIS 155 ? 1_555 ZN ? C ZN . ? B ZN 301 ? 1_555 OD2 ? A ASP 159 ? B ASP 159 ? 1_555 81.4 ? 11 OD2 ? A ASP 70 ? B ASP 70 ? 1_555 ZN ? D ZN . ? B ZN 302 ? 1_555 ND1 ? A HIS 73 ? B HIS 73 ? 1_555 90.2 ? 12 OD2 ? A ASP 70 ? B ASP 70 ? 1_555 ZN ? D ZN . ? B ZN 302 ? 1_555 NE2 ? A HIS 77 ? B HIS 77 ? 1_555 135.9 ? 13 ND1 ? A HIS 73 ? B HIS 73 ? 1_555 ZN ? D ZN . ? B ZN 302 ? 1_555 NE2 ? A HIS 77 ? B HIS 77 ? 1_555 82.9 ? 14 NE2 ? A HIS 234 ? B HIS 234 ? 1_555 ZN ? F ZN . ? B ZN 304 ? 1_555 ND1 ? A HIS 250 ? B HIS 250 ? 1_555 109.9 ? 15 NE2 ? A HIS 234 ? B HIS 234 ? 1_555 ZN ? F ZN . ? B ZN 304 ? 1_555 OD2 ? A ASP 287 ? B ASP 287 ? 1_555 109.8 ? 16 ND1 ? A HIS 250 ? B HIS 250 ? 1_555 ZN ? F ZN . ? B ZN 304 ? 1_555 OD2 ? A ASP 287 ? B ASP 287 ? 1_555 138.7 ? 17 NE2 ? A HIS 263 ? B HIS 263 ? 1_555 ZN ? G ZN . ? A ZN 303 ? 1_555 NE2 ? B HIS 285 ? A HIS 285 ? 1_555 89.4 ? 18 NE2 ? A HIS 263 ? B HIS 263 ? 1_555 ZN ? G ZN . ? A ZN 303 ? 1_555 OD1 ? B ASP 287 ? A ASP 287 ? 1_555 143.7 ? 19 NE2 ? B HIS 285 ? A HIS 285 ? 1_555 ZN ? G ZN . ? A ZN 303 ? 1_555 OD1 ? B ASP 287 ? A ASP 287 ? 1_555 114.6 ? 20 NE2 ? A HIS 285 ? B HIS 285 ? 1_555 ZN ? E ZN . ? B ZN 303 ? 1_555 OD1 ? A ASP 287 ? B ASP 287 ? 1_555 113.2 ? 21 NE2 ? A HIS 285 ? B HIS 285 ? 1_555 ZN ? E ZN . ? B ZN 303 ? 1_555 NE2 ? B HIS 263 ? A HIS 263 ? 1_555 79.4 ? 22 OD1 ? A ASP 287 ? B ASP 287 ? 1_555 ZN ? E ZN . ? B ZN 303 ? 1_555 NE2 ? B HIS 263 ? A HIS 263 ? 1_555 124.7 ? 23 OD2 ? B ASP 47 ? A ASP 47 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD1 ? B ASP 51 ? A ASP 51 ? 1_555 134.6 ? 24 OD2 ? B ASP 47 ? A ASP 47 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 51 ? A ASP 51 ? 1_555 97.7 ? 25 OD1 ? B ASP 51 ? A ASP 51 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 51 ? A ASP 51 ? 1_555 53.7 ? 26 OD2 ? B ASP 47 ? A ASP 47 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 NE2 ? B HIS 155 ? A HIS 155 ? 1_555 156.6 ? 27 OD1 ? B ASP 51 ? A ASP 51 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 NE2 ? B HIS 155 ? A HIS 155 ? 1_555 61.0 ? 28 OD2 ? B ASP 51 ? A ASP 51 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 NE2 ? B HIS 155 ? A HIS 155 ? 1_555 105.3 ? 29 OD2 ? B ASP 47 ? A ASP 47 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 159 ? A ASP 159 ? 1_555 106.9 ? 30 OD1 ? B ASP 51 ? A ASP 51 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 159 ? A ASP 159 ? 1_555 103.8 ? 31 OD2 ? B ASP 51 ? A ASP 51 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 159 ? A ASP 159 ? 1_555 83.4 ? 32 NE2 ? B HIS 155 ? A HIS 155 ? 1_555 ZN ? H ZN . ? A ZN 301 ? 1_555 OD2 ? B ASP 159 ? A ASP 159 ? 1_555 80.5 ? 33 OD2 ? B ASP 70 ? A ASP 70 ? 1_555 ZN ? I ZN . ? A ZN 302 ? 1_555 ND1 ? B HIS 73 ? A HIS 73 ? 1_555 88.8 ? 34 OD2 ? B ASP 70 ? A ASP 70 ? 1_555 ZN ? I ZN . ? A ZN 302 ? 1_555 NE2 ? B HIS 77 ? A HIS 77 ? 1_555 120.1 ? 35 ND1 ? B HIS 73 ? A HIS 73 ? 1_555 ZN ? I ZN . ? A ZN 302 ? 1_555 NE2 ? B HIS 77 ? A HIS 77 ? 1_555 83.0 ? 36 NE2 ? B HIS 234 ? A HIS 234 ? 1_555 ZN ? J ZN . ? A ZN 304 ? 1_555 ND1 ? B HIS 250 ? A HIS 250 ? 1_555 104.0 ? 37 NE2 ? B HIS 234 ? A HIS 234 ? 1_555 ZN ? J ZN . ? A ZN 304 ? 1_555 OD2 ? B ASP 287 ? A ASP 287 ? 1_555 108.0 ? 38 ND1 ? B HIS 250 ? A HIS 250 ? 1_555 ZN ? J ZN . ? A ZN 304 ? 1_555 OD2 ? B ASP 287 ? A ASP 287 ? 1_555 133.7 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 232 ? ALA A 241 ? GLY B 232 ALA B 241 AA1 2 THR A 244 ? GLU A 252 ? THR B 244 GLU B 252 AA1 3 ALA A 280 ? ASP A 287 ? ALA B 280 ASP B 287 AA2 1 GLY B 232 ? ALA B 241 ? GLY A 232 ALA A 241 AA2 2 THR B 244 ? GLU B 252 ? THR A 244 GLU A 252 AA2 3 ALA B 280 ? ASP B 287 ? ALA A 280 ASP A 287 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ARG A 239 ? N ARG B 239 O PHE A 246 ? O PHE B 246 AA1 2 3 N LEU A 251 ? N LEU B 251 O ASP A 287 ? O ASP B 287 AA2 1 2 N ARG B 239 ? N ARG A 239 O PHE B 246 ? O PHE A 246 AA2 2 3 N LEU B 251 ? N LEU A 251 O ASP B 287 ? O ASP A 287 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B ZN 301 ? 4 'binding site for residue ZN B 301' AC2 Software B ZN 302 ? 3 'binding site for residue ZN B 302' AC3 Software B ZN 303 ? 3 'binding site for residue ZN B 303' AC4 Software B ZN 304 ? 4 'binding site for residue ZN B 304' AC5 Software A ZN 303 ? 3 'binding site for residue ZN A 303' AC6 Software A ZN 301 ? 4 'binding site for residue ZN A 301' AC7 Software A ZN 302 ? 3 'binding site for residue ZN A 302' AC8 Software A ZN 304 ? 4 'binding site for residue ZN A 304' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP A 47 ? ASP B 47 . ? 1_555 ? 2 AC1 4 ASP A 51 ? ASP B 51 . ? 1_555 ? 3 AC1 4 HIS A 155 ? HIS B 155 . ? 1_555 ? 4 AC1 4 ASP A 159 ? ASP B 159 . ? 1_555 ? 5 AC2 3 ASP A 70 ? ASP B 70 . ? 1_555 ? 6 AC2 3 HIS A 73 ? HIS B 73 . ? 1_555 ? 7 AC2 3 HIS A 77 ? HIS B 77 . ? 1_555 ? 8 AC3 3 HIS B 263 ? HIS A 263 . ? 1_555 ? 9 AC3 3 HIS A 285 ? HIS B 285 . ? 1_555 ? 10 AC3 3 ASP A 287 ? ASP B 287 . ? 1_555 ? 11 AC4 4 HIS A 234 ? HIS B 234 . ? 1_555 ? 12 AC4 4 ASP A 235 ? ASP B 235 . ? 1_555 ? 13 AC4 4 HIS A 250 ? HIS B 250 . ? 1_555 ? 14 AC4 4 ASP A 287 ? ASP B 287 . ? 1_555 ? 15 AC5 3 HIS B 285 ? HIS A 285 . ? 1_555 ? 16 AC5 3 ASP B 287 ? ASP A 287 . ? 1_555 ? 17 AC5 3 HIS A 263 ? HIS B 263 . ? 1_555 ? 18 AC6 4 ASP B 47 ? ASP A 47 . ? 1_555 ? 19 AC6 4 ASP B 51 ? ASP A 51 . ? 1_555 ? 20 AC6 4 HIS B 155 ? HIS A 155 . ? 1_555 ? 21 AC6 4 ASP B 159 ? ASP A 159 . ? 1_555 ? 22 AC7 3 ASP B 70 ? ASP A 70 . ? 1_555 ? 23 AC7 3 HIS B 73 ? HIS A 73 . ? 1_555 ? 24 AC7 3 HIS B 77 ? HIS A 77 . ? 1_555 ? 25 AC8 4 HIS B 234 ? HIS A 234 . ? 1_555 ? 26 AC8 4 ASP B 235 ? ASP A 235 . ? 1_555 ? 27 AC8 4 HIS B 250 ? HIS A 250 . ? 1_555 ? 28 AC8 4 ASP B 287 ? ASP A 287 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OH B TYR 75 ? ? NH1 B ARG 239 ? ? 2.17 2 1 OH A TYR 75 ? ? NH1 A ARG 239 ? ? 2.17 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB B TYR 75 ? ? CG B TYR 75 ? ? 1.419 1.512 -0.093 0.015 N 2 1 CD1 B TYR 75 ? ? CE1 B TYR 75 ? ? 1.245 1.389 -0.144 0.015 N 3 1 CZ B TYR 75 ? ? OH B TYR 75 ? ? 1.264 1.374 -0.110 0.017 N 4 1 CE2 B TYR 75 ? ? CD2 B TYR 75 ? ? 1.256 1.389 -0.133 0.015 N 5 1 CB A TYR 75 ? ? CG A TYR 75 ? ? 1.419 1.512 -0.093 0.015 N 6 1 CD1 A TYR 75 ? ? CE1 A TYR 75 ? ? 1.244 1.389 -0.145 0.015 N 7 1 CZ A TYR 75 ? ? OH A TYR 75 ? ? 1.264 1.374 -0.110 0.017 N 8 1 CE2 A TYR 75 ? ? CD2 A TYR 75 ? ? 1.256 1.389 -0.133 0.015 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE B ARG 239 ? ? CZ B ARG 239 ? ? NH1 B ARG 239 ? ? 114.36 120.30 -5.94 0.50 N 2 1 NE B ARG 239 ? ? CZ B ARG 239 ? ? NH2 B ARG 239 ? ? 124.11 120.30 3.81 0.50 N 3 1 NE A ARG 239 ? ? CZ A ARG 239 ? ? NH1 A ARG 239 ? ? 114.40 120.30 -5.90 0.50 N 4 1 NE A ARG 239 ? ? CZ A ARG 239 ? ? NH2 A ARG 239 ? ? 124.08 120.30 3.78 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU B 226 ? ? -92.31 30.58 2 1 ASN B 256 ? ? -130.67 -30.23 3 1 GLU A 226 ? ? -92.25 30.43 4 1 ASN A 256 ? ? -130.68 -30.23 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Transcontinental EM Initiative for Membrane Protein Structure' _pdbx_SG_project.initial_of_center TEMIMPS # _em_3d_fitting.entry_id 5VRF _em_3d_fitting.id 1 _em_3d_fitting.details ;The residues were manually adjusted in COOT relying on the large side-chain residues, and the whole system was further optimized using the real_space_refine algorithm in Phenix to ensure proper fit. The conformation was subjected to 13 rounds of COOT/Phenix refinements. ; _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_protocol 'FLEXIBLE FIT' _em_3d_fitting.ref_space REAL _em_3d_fitting.target_criteria 'cross-correlation coefficient' _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.details _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code 1 1 ? A 7-288 3J1Z 1 ? ? PDB 'experimental model' 3J1Z 1 2 ? B 7-288 3J1Z 1 ? ? PDB 'experimental model' 3J1Z # _em_3d_reconstruction.entry_id 5VRF _em_3d_reconstruction.id 1 _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.details 'Reconstruction was achieved using the IHRSR method implemented in RELION 2.0.' _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles 72333 _em_3d_reconstruction.resolution 4.1 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.symmetry_type HELICAL _em_3d_reconstruction.method ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.euler_angles_details ? # _em_buffer.id 1 _em_buffer.details 'Buffer was changed twice per day.' _em_buffer.pH 7 _em_buffer.specimen_id 1 _em_buffer.name ? # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.details ? _em_entity_assembly.name 'YiiP dimer in an inward-facing conformation' _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.entity_id_list 1 _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? # _em_image_scans.entry_id 5VRF _em_image_scans.id 1 _em_image_scans.dimension_height 3838 _em_image_scans.dimension_width 3710 _em_image_scans.frames_per_image 50 _em_image_scans.image_recording_id 1 _em_image_scans.sampling_size ? _em_image_scans.scanner_model ? _em_image_scans.used_frames_per_image 2-16 _em_image_scans.citation_id ? _em_image_scans.number_digital_images ? _em_image_scans.od_range ? _em_image_scans.quant_bit_size ? _em_image_scans.details ? # _em_imaging.id 1 _em_imaging.entry_id 5VRF _em_imaging.accelerating_voltage 300 _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter ? _em_imaging.calibrated_defocus_max 5400 _em_imaging.calibrated_defocus_min 1000 _em_imaging.calibrated_magnification ? _em_imaging.cryogen NITROGEN _em_imaging.details ? _em_imaging.electron_source LAB6 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_max 2500 _em_imaging.nominal_defocus_min 1200 _em_imaging.nominal_magnification 22500 _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.residual_tilt ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.specimen_id 1 _em_imaging.citation_id ? _em_imaging.date ? _em_imaging.temperature ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.astigmatism ? _em_imaging.detector_distance ? _em_imaging.electron_beam_tilt_params ? _em_imaging.specimen_holder_type ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 400 _em_sample_support.grid_type EMS _em_sample_support.method ? _em_sample_support.film_material ? _em_sample_support.citation_id ? # _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.chamber_temperature ? _em_vitrification.cryogen_name ETHANE _em_vitrification.details ? _em_vitrification.humidity 90 _em_vitrification.instrument 'HOMEMADE PLUNGER' _em_vitrification.entry_id 5VRF _em_vitrification.citation_id ? _em_vitrification.method ? _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 5VRF _em_experiment.id 1 _em_experiment.aggregation_state 'HELICAL ARRAY' _em_experiment.reconstruction_method HELICAL _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET 1 ? A MET 1 2 1 Y 1 B THR 2 ? A THR 2 3 1 Y 1 B GLN 3 ? A GLN 3 4 1 Y 1 B THR 4 ? A THR 4 5 1 Y 1 B SER 5 ? A SER 5 6 1 Y 1 B GLN 6 ? A GLN 6 7 1 Y 1 B VAL 289 ? A VAL 289 8 1 Y 1 B GLN 290 ? A GLN 290 9 1 Y 1 B VAL 291 ? A VAL 291 10 1 Y 1 B GLU 292 ? A GLU 292 11 1 Y 1 B PRO 293 ? A PRO 293 12 1 Y 1 B THR 294 ? A THR 294 13 1 Y 1 B THR 295 ? A THR 295 14 1 Y 1 B GLN 296 ? A GLN 296 15 1 Y 1 A MET 1 ? B MET 1 16 1 Y 1 A THR 2 ? B THR 2 17 1 Y 1 A GLN 3 ? B GLN 3 18 1 Y 1 A THR 4 ? B THR 4 19 1 Y 1 A SER 5 ? B SER 5 20 1 Y 1 A GLN 6 ? B GLN 6 21 1 Y 1 A VAL 289 ? B VAL 289 22 1 Y 1 A GLN 290 ? B GLN 290 23 1 Y 1 A VAL 291 ? B VAL 291 24 1 Y 1 A GLU 292 ? B GLU 292 25 1 Y 1 A PRO 293 ? B PRO 293 26 1 Y 1 A THR 294 ? B THR 294 27 1 Y 1 A THR 295 ? B THR 295 28 1 Y 1 A GLN 296 ? B GLN 296 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 ZN ZN ZN N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # loop_ _em_buffer_component.buffer_id _em_buffer_component.id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.name 1 1 100 mM NaCl 'sodium chloride' 1 2 5 mM MgCl2 'magnesium chloride' 1 3 5 mM NaN3 'sodium azide' # _em_ctf_correction.id 1 _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' _em_ctf_correction.details ? # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.experimental_flag YES _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.06 # _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.ncbi_tax_id 211586 _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organism 'Shewanella oneidensis MR-1' _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? # _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.ncbi_tax_id 469008 _em_entity_assembly_recombinant.organism 'Escherichia coli BL21(DE3)' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain 'BL21 (DE3)' # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.angular_rotation_per_subunit -17.0 _em_helical_entity.axial_rise_per_subunit 28.2 _em_helical_entity.axial_symmetry D5 _em_helical_entity.details ? # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.avg_electron_dose_per_image 70 _em_image_recording.average_exposure_time 10 _em_image_recording.details ? _em_image_recording.detector_mode COUNTING _em_image_recording.film_or_detector_model 'GATAN K2 SUMMIT (4k x 4k)' _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 3 _em_image_recording.num_real_images 2743 # _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.details '2293 filaments selected with SPARX/EMAN2, then windowed into 141,904 segments (450x450 pixel overlapping segments)' _em_particle_selection.method ? _em_particle_selection.num_particles_selected 141904 _em_particle_selection.reference_model ? # loop_ _em_software.id _em_software.category _em_software.details _em_software.name _em_software.version _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id 1 'PARTICLE SELECTION' sxhelixboxer.py SPARX/EMAN2 EMAN2.1 1 ? ? 2 'PARTICLE SELECTION' '2D Classissification' RELION 2.0 1 ? ? 3 'IMAGE ACQUISITION' ? Leginon ? ? ? 1 4 'IMAGE ACQUISITION' ? ? ? ? ? 1 5 MASKING ? ? ? ? ? ? 6 'CTF CORRECTION' ? CTFFIND 4.1 1 ? ? 7 'CTF CORRECTION' ? Gctf 0.50 1 ? ? 8 'LAYERLINE INDEXING' ? ? ? ? ? ? 9 'DIFFRACTION INDEXING' ? ? ? ? ? ? 10 'MODEL FITTING' ? Coot 0.8.6 ? 1 ? 11 OTHER ? ? ? ? ? ? 12 'INITIAL EULER ASSIGNMENT' ? RELION 2.0 1 ? ? 13 'FINAL EULER ASSIGNMENT' ? RELION 2.0 1 ? ? 14 CLASSIFICATION ? RELION 2.0 1 ? ? 15 RECONSTRUCTION ? RELION 2.0 1 ? ? 16 'MODEL REFINEMENT' real_space_refine PHENIX 1.11 ? 1 ? # _em_specimen.id 1 _em_specimen.experiment_id 1 _em_specimen.concentration 0.6 _em_specimen.details 'The protein was purified in 0.2% n-dodecyl beta-D-maltoside' _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'U54 GM94598' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R01 GM095747' 2 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3J1Z # _atom_sites.entry_id 5VRF _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_