data_5VS0 # _entry.id 5VS0 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VS0 pdb_00005vs0 10.2210/pdb5vs0/pdb WWPDB D_1000227918 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5VRX unspecified PDB . 5VRY unspecified PDB . 5VRZ unspecified PDB . 5VS1 unspecified PDB . 5VS2 unspecified PDB . 5VS3 unspecified PDB . 5VS4 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VS0 _pdbx_database_status.recvd_initial_deposition_date 2017-05-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Reed, A.J.' 1 ? 'Suo, Z.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 139 _citation.language ? _citation.page_first 9684 _citation.page_last 9690 _citation.title 'Time-Dependent Extension from an 8-Oxoguanine Lesion by Human DNA Polymerase Beta.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/jacs.7b05048 _citation.pdbx_database_id_PubMed 28682600 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Reed, A.J.' 1 ? primary 'Suo, Z.' 2 ? # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 107.600 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 5VS0 _cell.details ? _cell.formula_units_Z ? _cell.length_a 50.600 _cell.length_a_esd ? _cell.length_b 80.300 _cell.length_b_esd ? _cell.length_c 55.400 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VS0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase beta' 39070.543 1 2.7.7.7,4.2.99.- ? ? ? 2 polymer syn ;DNA (5'-D(P*GP*TP*CP*GP*G)-3') ; 1536.035 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(*CP*TP*GP*AP*TP*GP*CP*GP*CP*CP*T)-3') ; 3325.172 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(*CP*CP*GP*AP*CP*AP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*G)-3') ; 4909.182 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 6 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 7 non-polymer syn IMIDAZOLE 69.085 1 ? ? ? ? 8 non-polymer syn PYROPHOSPHATE 177.975 1 ? ? ? ? 9 water nat water 18.015 145 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSEHHHHHH ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSEHHHHHH ; A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 3 polydeoxyribonucleotide no no '(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DC)(DC)(DT)' CTGATGCGCCT P ? 4 polydeoxyribonucleotide no yes '(DC)(DC)(DG)(DA)(DC)(DA)(8OG)(DG)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)' CCGACAGGCGCATCAG T ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 ARG n 1 5 LYS n 1 6 ALA n 1 7 PRO n 1 8 GLN n 1 9 GLU n 1 10 THR n 1 11 LEU n 1 12 ASN n 1 13 GLY n 1 14 GLY n 1 15 ILE n 1 16 THR n 1 17 ASP n 1 18 MET n 1 19 LEU n 1 20 THR n 1 21 GLU n 1 22 LEU n 1 23 ALA n 1 24 ASN n 1 25 PHE n 1 26 GLU n 1 27 LYS n 1 28 ASN n 1 29 VAL n 1 30 SER n 1 31 GLN n 1 32 ALA n 1 33 ILE n 1 34 HIS n 1 35 LYS n 1 36 TYR n 1 37 ASN n 1 38 ALA n 1 39 TYR n 1 40 ARG n 1 41 LYS n 1 42 ALA n 1 43 ALA n 1 44 SER n 1 45 VAL n 1 46 ILE n 1 47 ALA n 1 48 LYS n 1 49 TYR n 1 50 PRO n 1 51 HIS n 1 52 LYS n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 GLY n 1 57 ALA n 1 58 GLU n 1 59 ALA n 1 60 LYS n 1 61 LYS n 1 62 LEU n 1 63 PRO n 1 64 GLY n 1 65 VAL n 1 66 GLY n 1 67 THR n 1 68 LYS n 1 69 ILE n 1 70 ALA n 1 71 GLU n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 GLU n 1 76 PHE n 1 77 LEU n 1 78 ALA n 1 79 THR n 1 80 GLY n 1 81 LYS n 1 82 LEU n 1 83 ARG n 1 84 LYS n 1 85 LEU n 1 86 GLU n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 GLN n 1 91 ASP n 1 92 ASP n 1 93 THR n 1 94 SER n 1 95 SER n 1 96 SER n 1 97 ILE n 1 98 ASN n 1 99 PHE n 1 100 LEU n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 SER n 1 105 GLY n 1 106 ILE n 1 107 GLY n 1 108 PRO n 1 109 SER n 1 110 ALA n 1 111 ALA n 1 112 ARG n 1 113 LYS n 1 114 PHE n 1 115 VAL n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 ILE n 1 120 LYS n 1 121 THR n 1 122 LEU n 1 123 GLU n 1 124 ASP n 1 125 LEU n 1 126 ARG n 1 127 LYS n 1 128 ASN n 1 129 GLU n 1 130 ASP n 1 131 LYS n 1 132 LEU n 1 133 ASN n 1 134 HIS n 1 135 HIS n 1 136 GLN n 1 137 ARG n 1 138 ILE n 1 139 GLY n 1 140 LEU n 1 141 LYS n 1 142 TYR n 1 143 PHE n 1 144 GLY n 1 145 ASP n 1 146 PHE n 1 147 GLU n 1 148 LYS n 1 149 ARG n 1 150 ILE n 1 151 PRO n 1 152 ARG n 1 153 GLU n 1 154 GLU n 1 155 MET n 1 156 LEU n 1 157 GLN n 1 158 MET n 1 159 GLN n 1 160 ASP n 1 161 ILE n 1 162 VAL n 1 163 LEU n 1 164 ASN n 1 165 GLU n 1 166 VAL n 1 167 LYS n 1 168 LYS n 1 169 VAL n 1 170 ASP n 1 171 SER n 1 172 GLU n 1 173 TYR n 1 174 ILE n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 CYS n 1 179 GLY n 1 180 SER n 1 181 PHE n 1 182 ARG n 1 183 ARG n 1 184 GLY n 1 185 ALA n 1 186 GLU n 1 187 SER n 1 188 SER n 1 189 GLY n 1 190 ASP n 1 191 MET n 1 192 ASP n 1 193 VAL n 1 194 LEU n 1 195 LEU n 1 196 THR n 1 197 HIS n 1 198 PRO n 1 199 SER n 1 200 PHE n 1 201 THR n 1 202 SER n 1 203 GLU n 1 204 SER n 1 205 THR n 1 206 LYS n 1 207 GLN n 1 208 PRO n 1 209 LYS n 1 210 LEU n 1 211 LEU n 1 212 HIS n 1 213 GLN n 1 214 VAL n 1 215 VAL n 1 216 GLU n 1 217 GLN n 1 218 LEU n 1 219 GLN n 1 220 LYS n 1 221 VAL n 1 222 HIS n 1 223 PHE n 1 224 ILE n 1 225 THR n 1 226 ASP n 1 227 THR n 1 228 LEU n 1 229 SER n 1 230 LYS n 1 231 GLY n 1 232 GLU n 1 233 THR n 1 234 LYS n 1 235 PHE n 1 236 MET n 1 237 GLY n 1 238 VAL n 1 239 CYS n 1 240 GLN n 1 241 LEU n 1 242 PRO n 1 243 SER n 1 244 LYS n 1 245 ASN n 1 246 ASP n 1 247 GLU n 1 248 LYS n 1 249 GLU n 1 250 TYR n 1 251 PRO n 1 252 HIS n 1 253 ARG n 1 254 ARG n 1 255 ILE n 1 256 ASP n 1 257 ILE n 1 258 ARG n 1 259 LEU n 1 260 ILE n 1 261 PRO n 1 262 LYS n 1 263 ASP n 1 264 GLN n 1 265 TYR n 1 266 TYR n 1 267 CYS n 1 268 GLY n 1 269 VAL n 1 270 LEU n 1 271 TYR n 1 272 PHE n 1 273 THR n 1 274 GLY n 1 275 SER n 1 276 ASP n 1 277 ILE n 1 278 PHE n 1 279 ASN n 1 280 LYS n 1 281 ASN n 1 282 MET n 1 283 ARG n 1 284 ALA n 1 285 HIS n 1 286 ALA n 1 287 LEU n 1 288 GLU n 1 289 LYS n 1 290 GLY n 1 291 PHE n 1 292 THR n 1 293 ILE n 1 294 ASN n 1 295 GLU n 1 296 TYR n 1 297 THR n 1 298 ILE n 1 299 ARG n 1 300 PRO n 1 301 LEU n 1 302 GLY n 1 303 VAL n 1 304 THR n 1 305 GLY n 1 306 VAL n 1 307 ALA n 1 308 GLY n 1 309 GLU n 1 310 PRO n 1 311 LEU n 1 312 PRO n 1 313 VAL n 1 314 ASP n 1 315 SER n 1 316 GLU n 1 317 LYS n 1 318 ASP n 1 319 ILE n 1 320 PHE n 1 321 ASP n 1 322 TYR n 1 323 ILE n 1 324 GLN n 1 325 TRP n 1 326 LYS n 1 327 TYR n 1 328 ARG n 1 329 GLU n 1 330 PRO n 1 331 LYS n 1 332 ASP n 1 333 ARG n 1 334 SER n 1 335 GLU n 1 336 HIS n 1 337 HIS n 1 338 HIS n 1 339 HIS n 1 340 HIS n 1 341 HIS n 2 1 DG n 2 2 DT n 2 3 DC n 2 4 DG n 2 5 DG n 3 1 DC n 3 2 DT n 3 3 DG n 3 4 DA n 3 5 DT n 3 6 DG n 3 7 DC n 3 8 DG n 3 9 DC n 3 10 DC n 3 11 DT n 4 1 DC n 4 2 DC n 4 3 DG n 4 4 DA n 4 5 DC n 4 6 DA n 4 7 8OG n 4 8 DG n 4 9 DC n 4 10 DG n 4 11 DC n 4 12 DA n 4 13 DT n 4 14 DC n 4 15 DA n 4 16 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 341 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 5 'synthetic construct' ? 32630 ? 3 1 sample 1 11 'synthetic construct' ? 32630 ? 4 1 sample 1 16 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPOLB_HUMAN P06746 ? 1 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 1 2 PDB 5VS0 5VS0 ? 2 ? 1 3 PDB 5VS0 5VS0 ? 3 ? 1 4 PDB 5VS0 5VS0 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VS0 A 1 ? 335 ? P06746 1 ? 335 ? 1 335 2 2 5VS0 D 1 ? 5 ? 5VS0 1 ? 5 ? 1 5 3 3 5VS0 P 1 ? 11 ? 5VS0 1 ? 11 ? 1 11 4 4 5VS0 T 1 ? 16 ? 5VS0 1 ? 16 ? 1 16 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VS0 HIS A 336 ? UNP P06746 ? ? 'expression tag' 336 1 1 5VS0 HIS A 337 ? UNP P06746 ? ? 'expression tag' 337 2 1 5VS0 HIS A 338 ? UNP P06746 ? ? 'expression tag' 338 3 1 5VS0 HIS A 339 ? UNP P06746 ? ? 'expression tag' 339 4 1 5VS0 HIS A 340 ? UNP P06746 ? ? 'expression tag' 340 5 1 5VS0 HIS A 341 ? UNP P06746 ? ? 'expression tag' 341 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8OG 'DNA linking' n "8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" "8-OXO-7,8-DIHYDRO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE" 'C10 H14 N5 O8 P' 363.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IMD non-polymer . IMIDAZOLE ? 'C3 H5 N2 1' 69.085 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PPV non-polymer . PYROPHOSPHATE ? 'H4 O7 P2' 177.975 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VS0 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.23 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50 mM imidazole pH 7.0-7.5, 350 mM sodium acetate, 16-18% PEG 3350' _exptl_crystal_grow.pdbx_pH_range 7.0-7.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-11-12 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97931 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 31-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97931 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 31-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate 35.549 _reflns.entry_id 5VS0 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.100 _reflns.d_resolution_low 52.810 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 47060 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.000 _reflns.percent_possible_obs 96.800 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 1.928 _reflns.pdbx_Rmerge_I_obs 0.066 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.840 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.981 _reflns.pdbx_scaling_rejects 64 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.092 _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 90731 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.995 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 2.100 2.200 ? 2.450 ? ? ? ? 6261 98.700 ? ? ? ? 0.317 ? ? ? ? ? ? ? ? 1.906 ? ? ? ? 0.438 ? ? 1 1 0.728 ? 2.200 2.500 ? 2.940 ? ? ? ? 13298 98.700 ? ? ? ? 0.275 ? ? ? ? ? ? ? ? 1.917 ? ? ? ? 0.381 ? ? 2 1 0.862 ? 2.500 3.000 ? 6.050 ? ? ? ? 11913 98.300 ? ? ? ? 0.127 ? ? ? ? ? ? ? ? 1.936 ? ? ? ? 0.175 ? ? 3 1 0.971 ? 3.000 4.000 ? 15.650 ? ? ? ? 9048 94.000 ? ? ? ? 0.045 ? ? ? ? ? ? ? ? 1.936 ? ? ? ? 0.062 ? ? 4 1 0.995 ? 4.000 6.000 ? 21.920 ? ? ? ? 4644 93.900 ? ? ? ? 0.031 ? ? ? ? ? ? ? ? 1.951 ? ? ? ? 0.042 ? ? 5 1 0.996 ? 6.000 7.000 ? 22.370 ? ? ? ? 753 96.700 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 1.960 ? ? ? ? 0.040 ? ? 6 1 0.996 ? 7.000 8.000 ? 24.580 ? ? ? ? 427 96.000 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 1.970 ? ? ? ? 0.041 ? ? 7 1 0.995 ? 8.000 10.000 ? 26.420 ? ? ? ? 387 91.300 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 1.930 ? ? ? ? 0.039 ? ? 8 1 0.995 ? 10.000 12.000 ? 26.770 ? ? ? ? 159 82.400 ? ? ? ? 0.027 ? ? ? ? ? ? ? ? 1.836 ? ? ? ? 0.038 ? ? 9 1 0.995 ? 12.000 52.810 ? 24.040 ? ? ? ? 170 64.900 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 1.753 ? ? ? ? 0.040 ? ? 10 1 0.995 ? # _refine.aniso_B[1][1] 0.0800 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][2] -0.1800 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.0900 _refine.B_iso_max 86.070 _refine.B_iso_mean 32.5880 _refine.B_iso_min 13.150 _refine.correlation_coeff_Fo_to_Fc 0.9430 _refine.correlation_coeff_Fo_to_Fc_free 0.8780 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : REFINED INDIVIDUALLY' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VS0 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.1000 _refine.ls_d_res_low 52.8100 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 23241 _refine.ls_number_reflns_R_free 1224 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.8800 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2048 _refine.ls_R_factor_R_free 0.2621 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2019 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4rpx _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.2590 _refine.pdbx_overall_ESU_R_Free 0.2160 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.8300 _refine.overall_SU_ML 0.1520 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.1000 _refine_hist.d_res_low 52.8100 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 145 _refine_hist.number_atoms_total 3425 _refine_hist.pdbx_number_residues_total 358 _refine_hist.pdbx_B_iso_mean_ligand 34.74 _refine_hist.pdbx_B_iso_mean_solvent 32.26 _refine_hist.pdbx_number_atoms_protein 2606 _refine_hist.pdbx_number_atoms_nucleic_acid 652 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.010 0.018 3397 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 2936 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.490 1.799 4709 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.093 3.000 6806 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.621 5.000 325 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.331 24.240 125 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 15.691 15.000 505 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 15.135 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.093 0.200 484 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.007 0.020 3364 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 765 ? r_gen_planes_other ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.1000 _refine_ls_shell.d_res_low 2.1550 _refine_ls_shell.number_reflns_all 1815 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 91 _refine_ls_shell.number_reflns_R_work 1724 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2990 _refine_ls_shell.R_factor_R_free_error 0.0000 _refine_ls_shell.R_factor_R_work 0.2700 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 5VS0 _struct.title 'Human DNA polymerase beta 8-oxoG:dC extension with dTTP after 80 s' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VS0 _struct_keywords.text '8-oxoguanine, polymerase, BER, transferase, lyase-dna complex' _struct_keywords.pdbx_keywords 'transferase, lyase/dna' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 6 ? J N N 6 ? K N N 7 ? L N N 8 ? M N N 5 ? N N N 5 ? O N N 9 ? P N N 9 ? Q N N 9 ? R N N 9 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? VAL A 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 AA2 ALA A 32 ? TYR A 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 AA3 SER A 55 ? LYS A 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 AA4 GLY A 66 ? GLY A 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 AA5 LEU A 82 ? ASP A 91 ? LEU A 82 ASP A 91 1 ? 10 HELX_P HELX_P6 AA6 ASP A 91 ? THR A 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 AA7 GLY A 107 ? GLU A 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 AA8 THR A 121 ? ASN A 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 AA9 GLU A 129 ? LEU A 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 AB1 ASN A 133 ? TYR A 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 AB2 TYR A 142 ? GLU A 147 ? TYR A 142 GLU A 147 1 ? 6 HELX_P HELX_P12 AB3 ARG A 152 ? ASP A 170 ? ARG A 152 ASP A 170 1 ? 19 HELX_P HELX_P13 AB4 CYS A 178 ? ARG A 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 AB5 LYS A 209 ? VAL A 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 AB6 PRO A 261 ? ASP A 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 AB7 GLN A 264 ? GLY A 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 AB8 SER A 275 ? LYS A 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 AB9 SER A 315 ? ILE A 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 AC1 GLU A 329 ? SER A 334 ? GLU A 329 SER A 334 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? D DA 6 "O3'" ? ? ? 1_555 D 8OG 7 P ? ? T DA 6 T 8OG 7 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale2 covale both ? D 8OG 7 "O3'" ? ? ? 1_555 D DG 8 P ? ? T 8OG 7 T DG 8 1_555 ? ? ? ? ? ? ? 1.590 ? ? metalc1 metalc ? ? A LYS 60 O ? ? ? 1_555 H MG . MG ? ? A LYS 60 A MG 404 1_555 ? ? ? ? ? ? ? 2.276 ? ? metalc2 metalc ? ? A LEU 62 O ? ? ? 1_555 H MG . MG ? ? A LEU 62 A MG 404 1_555 ? ? ? ? ? ? ? 2.339 ? ? metalc3 metalc ? ? A VAL 65 O ? ? ? 1_555 H MG . MG ? ? A VAL 65 A MG 404 1_555 ? ? ? ? ? ? ? 2.319 ? ? metalc4 metalc ? ? A THR 101 O ? ? ? 1_555 G MG . MG ? ? A THR 101 A MG 403 1_555 ? ? ? ? ? ? ? 2.176 ? ? metalc5 metalc ? ? A VAL 103 O ? ? ? 1_555 G MG . MG ? ? A VAL 103 A MG 403 1_555 ? ? ? ? ? ? ? 2.445 ? ? metalc6 metalc ? ? A ILE 106 O ? ? ? 1_555 G MG . MG ? ? A ILE 106 A MG 403 1_555 ? ? ? ? ? ? ? 2.420 ? ? metalc7 metalc ? ? A ASP 190 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 401 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc8 metalc ? ? A ASP 190 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 190 A MG 402 1_555 ? ? ? ? ? ? ? 1.947 ? ? metalc9 metalc ? ? A ASP 192 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 401 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc10 metalc ? ? A ASP 192 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 192 A MG 402 1_555 ? ? ? ? ? ? ? 2.172 ? ? metalc11 metalc ? ? A ASP 256 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 256 A MG 402 1_555 ? ? ? ? ? ? ? 2.090 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 L PPV . O11 ? ? A MG 401 A PPV 408 1_555 ? ? ? ? ? ? ? 2.053 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 L PPV . O12 ? ? A MG 401 A PPV 408 1_555 ? ? ? ? ? ? ? 2.447 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 401 A HOH 558 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 C DT 11 OP1 ? ? A MG 401 P DT 11 1_555 ? ? ? ? ? ? ? 2.134 ? ? metalc16 metalc ? ? F MG . MG ? ? ? 1_555 C DC 10 "O3'" ? ? A MG 402 P DC 10 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc17 metalc ? ? F MG . MG ? ? ? 1_555 C DT 11 OP1 ? ? A MG 402 P DT 11 1_555 ? ? ? ? ? ? ? 2.568 ? ? metalc18 metalc ? ? G MG . MG ? ? ? 1_555 O HOH . O ? ? A MG 403 A HOH 589 1_555 ? ? ? ? ? ? ? 2.438 ? ? metalc19 metalc ? ? G MG . MG ? ? ? 1_555 C DC 9 OP1 ? ? A MG 403 P DC 9 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 Q HOH . O ? ? A MG 403 P HOH 201 1_555 ? ? ? ? ? ? ? 2.397 ? ? metalc21 metalc ? ? H MG . MG ? ? ? 1_555 B DC 3 OP1 ? ? A MG 404 D DC 3 1_555 ? ? ? ? ? ? ? 2.711 ? ? metalc22 metalc ? ? L PPV . O21 ? ? ? 1_555 M MG . MG ? ? A PPV 408 P MG 101 1_555 ? ? ? ? ? ? ? 1.982 ? ? metalc23 metalc ? ? O HOH . O ? ? ? 1_555 M MG . MG ? ? A HOH 501 P MG 101 1_555 ? ? ? ? ? ? ? 2.085 ? ? metalc24 metalc ? ? O HOH . O ? ? ? 1_555 M MG . MG ? ? A HOH 564 P MG 101 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc25 metalc ? ? C DT 11 OP2 ? ? ? 1_555 M MG . MG ? ? P DT 11 P MG 101 1_555 ? ? ? ? ? ? ? 2.297 ? ? metalc26 metalc ? ? M MG . MG ? ? ? 1_555 Q HOH . O ? ? P MG 101 P HOH 203 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc27 metalc ? ? N MG . MG ? ? ? 1_555 Q HOH . O ? ? P MG 102 P HOH 202 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc28 metalc ? ? N MG . MG ? ? ? 1_555 Q HOH . O ? ? P MG 102 P HOH 204 1_555 ? ? ? ? ? ? ? 1.862 ? ? metalc29 metalc ? ? N MG . MG ? ? ? 1_555 R HOH . O ? ? P MG 102 T HOH 119 1_555 ? ? ? ? ? ? ? 2.136 ? ? metalc30 metalc ? ? N MG . MG ? ? ? 1_555 R HOH . O ? ? P MG 102 T HOH 120 1_555 ? ? ? ? ? ? ? 1.793 ? ? hydrog1 hydrog ? ? B DG 1 N1 ? ? ? 1_555 D DC 5 N3 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DG 1 N2 ? ? ? 1_555 D DC 5 O2 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DG 1 O6 ? ? ? 1_555 D DC 5 N4 ? ? D DG 1 T DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DT 2 N3 ? ? ? 1_555 D DA 4 N1 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DT 2 O4 ? ? ? 1_555 D DA 4 N6 ? ? D DT 2 T DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 3 N3 ? ? ? 1_555 D DG 3 N1 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DC 3 N4 ? ? ? 1_555 D DG 3 O6 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DC 3 O2 ? ? ? 1_555 D DG 3 N2 ? ? D DC 3 T DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 4 N1 ? ? ? 1_555 D DC 2 N3 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 4 N2 ? ? ? 1_555 D DC 2 O2 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 4 O6 ? ? ? 1_555 D DC 2 N4 ? ? D DG 4 T DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 5 N1 ? ? ? 1_555 D DC 1 N3 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 5 N2 ? ? ? 1_555 D DC 1 O2 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 5 O6 ? ? ? 1_555 D DC 1 N4 ? ? D DG 5 T DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DC 1 N3 ? ? ? 1_555 D DG 16 N1 ? ? P DC 1 T DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 1 N4 ? ? ? 1_555 D DG 16 O6 ? ? P DC 1 T DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C DC 1 O2 ? ? ? 1_555 D DG 16 N2 ? ? P DC 1 T DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 2 N3 ? ? ? 1_555 D DA 15 N1 ? ? P DT 2 T DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DT 2 O4 ? ? ? 1_555 D DA 15 N6 ? ? P DT 2 T DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 14 N3 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 14 O2 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 14 N4 ? ? P DG 3 T DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 13 N3 ? ? P DA 4 T DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 13 O4 ? ? P DA 4 T DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 5 N3 ? ? ? 1_555 D DA 12 N1 ? ? P DT 5 T DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DT 5 O4 ? ? ? 1_555 D DA 12 N6 ? ? P DT 5 T DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 6 N1 ? ? ? 1_555 D DC 11 N3 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DC 11 O2 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 6 O6 ? ? ? 1_555 D DC 11 N4 ? ? P DG 6 T DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 7 N3 ? ? ? 1_555 D DG 10 N1 ? ? P DC 7 T DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 7 N4 ? ? ? 1_555 D DG 10 O6 ? ? P DC 7 T DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 10 N2 ? ? P DC 7 T DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 9 N3 ? ? P DG 8 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 9 O2 ? ? P DG 8 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 9 N4 ? ? P DG 8 T DC 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 9 N3 ? ? ? 1_555 D DG 8 N1 ? ? P DC 9 T DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 9 N4 ? ? ? 1_555 D DG 8 O6 ? ? P DC 9 T DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 9 O2 ? ? ? 1_555 D DG 8 N2 ? ? P DC 9 T DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D 8OG 7 N1 ? ? P DC 10 T 8OG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D 8OG 7 O6 ? ? P DC 10 T 8OG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D 8OG 7 N2 ? ? P DC 10 T 8OG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DT 11 N3 ? ? ? 1_555 D DA 6 N1 ? ? P DT 11 T DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DT 11 O4 ? ? ? 1_555 D DA 6 N6 ? ? P DT 11 T DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 150 ? PRO A 151 ? ILE A 150 PRO A 151 AA1 2 SER A 187 ? SER A 188 ? SER A 187 SER A 188 AA2 1 ILE A 174 ? VAL A 177 ? ILE A 174 VAL A 177 AA2 2 MET A 191 ? THR A 196 ? MET A 191 THR A 196 AA2 3 ARG A 253 ? LEU A 259 ? ARG A 253 LEU A 259 AA2 4 LYS A 234 ? CYS A 239 ? LYS A 234 CYS A 239 AA2 5 ILE A 224 ? LYS A 230 ? ILE A 224 LYS A 230 AA3 1 PHE A 200 ? THR A 201 ? PHE A 200 THR A 201 AA3 2 SER A 204 ? THR A 205 ? SER A 204 THR A 205 AA4 1 PHE A 291 ? ILE A 293 ? PHE A 291 ILE A 293 AA4 2 ILE A 298 ? PRO A 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ILE A 150 ? N ILE A 150 O SER A 188 ? O SER A 188 AA2 1 2 N THR A 176 ? N THR A 176 O LEU A 194 ? O LEU A 194 AA2 2 3 N LEU A 195 ? N LEU A 195 O ARG A 258 ? O ARG A 258 AA2 3 4 O ARG A 253 ? O ARG A 253 N CYS A 239 ? N CYS A 239 AA2 4 5 O MET A 236 ? O MET A 236 N SER A 229 ? N SER A 229 AA3 1 2 N THR A 201 ? N THR A 201 O SER A 204 ? O SER A 204 AA4 1 2 N THR A 292 ? N THR A 292 O ARG A 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 401 ? 5 'binding site for residue MG A 401' AC2 Software A MG 402 ? 5 'binding site for residue MG A 402' AC3 Software A MG 403 ? 6 'binding site for residue MG A 403' AC4 Software A MG 404 ? 4 'binding site for residue MG A 404' AC5 Software A CL 405 ? 2 'binding site for residue CL A 405' AC6 Software A CL 406 ? 2 'binding site for residue CL A 406' AC7 Software A IMD 407 ? 4 'binding site for residue IMD A 407' AC8 Software A PPV 408 ? 16 'binding site for residue PPV A 408' AC9 Software P MG 101 ? 5 'binding site for residue MG P 101' AD1 Software P MG 102 ? 4 'binding site for residue MG P 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 2 AC1 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 3 AC1 5 PPV L . ? PPV A 408 . ? 1_555 ? 4 AC1 5 HOH O . ? HOH A 558 . ? 1_555 ? 5 AC1 5 DT C 11 ? DT P 11 . ? 1_555 ? 6 AC2 5 ASP A 190 ? ASP A 190 . ? 1_555 ? 7 AC2 5 ASP A 192 ? ASP A 192 . ? 1_555 ? 8 AC2 5 ASP A 256 ? ASP A 256 . ? 1_555 ? 9 AC2 5 DC C 10 ? DC P 10 . ? 1_555 ? 10 AC2 5 DT C 11 ? DT P 11 . ? 1_555 ? 11 AC3 6 THR A 101 ? THR A 101 . ? 1_555 ? 12 AC3 6 VAL A 103 ? VAL A 103 . ? 1_555 ? 13 AC3 6 ILE A 106 ? ILE A 106 . ? 1_555 ? 14 AC3 6 HOH O . ? HOH A 589 . ? 1_555 ? 15 AC3 6 DC C 9 ? DC P 9 . ? 1_555 ? 16 AC3 6 HOH Q . ? HOH P 201 . ? 1_555 ? 17 AC4 4 LYS A 60 ? LYS A 60 . ? 1_555 ? 18 AC4 4 LEU A 62 ? LEU A 62 . ? 1_555 ? 19 AC4 4 VAL A 65 ? VAL A 65 . ? 1_555 ? 20 AC4 4 DC B 3 ? DC D 3 . ? 1_555 ? 21 AC5 2 ASN A 294 ? ASN A 294 . ? 1_555 ? 22 AC5 2 THR A 297 ? THR A 297 . ? 1_555 ? 23 AC6 2 LEU A 82 ? LEU A 82 . ? 1_555 ? 24 AC6 2 ARG A 89 ? ARG A 89 . ? 1_555 ? 25 AC7 4 ILE A 174 ? ILE A 174 . ? 1_555 ? 26 AC7 4 THR A 196 ? THR A 196 . ? 1_555 ? 27 AC7 4 LYS A 262 ? LYS A 262 . ? 1_555 ? 28 AC7 4 TYR A 265 ? TYR A 265 . ? 1_555 ? 29 AC8 16 ARG A 149 ? ARG A 149 . ? 1_555 ? 30 AC8 16 GLY A 179 ? GLY A 179 . ? 1_555 ? 31 AC8 16 SER A 180 ? SER A 180 . ? 1_555 ? 32 AC8 16 ARG A 183 ? ARG A 183 . ? 1_555 ? 33 AC8 16 SER A 188 ? SER A 188 . ? 1_555 ? 34 AC8 16 GLY A 189 ? GLY A 189 . ? 1_555 ? 35 AC8 16 ASP A 190 ? ASP A 190 . ? 1_555 ? 36 AC8 16 ASP A 192 ? ASP A 192 . ? 1_555 ? 37 AC8 16 MG E . ? MG A 401 . ? 1_555 ? 38 AC8 16 HOH O . ? HOH A 501 . ? 1_555 ? 39 AC8 16 HOH O . ? HOH A 512 . ? 1_555 ? 40 AC8 16 HOH O . ? HOH A 558 . ? 1_555 ? 41 AC8 16 HOH O . ? HOH A 564 . ? 1_555 ? 42 AC8 16 DT C 11 ? DT P 11 . ? 1_555 ? 43 AC8 16 MG M . ? MG P 101 . ? 1_555 ? 44 AC8 16 HOH Q . ? HOH P 203 . ? 1_555 ? 45 AC9 5 PPV L . ? PPV A 408 . ? 1_555 ? 46 AC9 5 HOH O . ? HOH A 501 . ? 1_555 ? 47 AC9 5 HOH O . ? HOH A 564 . ? 1_555 ? 48 AC9 5 DT C 11 ? DT P 11 . ? 1_555 ? 49 AC9 5 HOH Q . ? HOH P 203 . ? 1_555 ? 50 AD1 4 HOH Q . ? HOH P 202 . ? 1_555 ? 51 AD1 4 HOH Q . ? HOH P 204 . ? 1_555 ? 52 AD1 4 HOH R . ? HOH T 119 . ? 1_555 ? 53 AD1 4 HOH R . ? HOH T 120 . ? 1_555 ? # _atom_sites.entry_id 5VS0 _atom_sites.fract_transf_matrix[1][1] 0.019763 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006269 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012453 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018937 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CL MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 LYS 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 LYS 5 5 ? ? ? A . n A 1 6 ALA 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLN 8 8 ? ? ? A . n A 1 9 GLU 9 9 ? ? ? A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ASN 12 12 12 ASN ASN A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 PHE 25 25 25 PHE PHE A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASN 28 28 28 ASN ASN A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 HIS 34 34 34 HIS HIS A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ARG 40 40 40 ARG ARG A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 VAL 45 45 45 VAL VAL A . n A 1 46 ILE 46 46 46 ILE ILE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 HIS 51 51 51 HIS HIS A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 PRO 63 63 63 PRO PRO A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ILE 73 73 73 ILE ILE A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 LYS 87 87 87 LYS LYS A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 ILE 97 97 97 ILE ILE A . n A 1 98 ASN 98 98 98 ASN ASN A . n A 1 99 PHE 99 99 99 PHE PHE A . n A 1 100 LEU 100 100 100 LEU LEU A . n A 1 101 THR 101 101 101 THR THR A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 PRO 108 108 108 PRO PRO A . n A 1 109 SER 109 109 109 SER SER A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 PHE 114 114 114 PHE PHE A . n A 1 115 VAL 115 115 115 VAL VAL A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LYS 120 120 120 LYS LYS A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 GLU 123 123 123 GLU GLU A . n A 1 124 ASP 124 124 124 ASP ASP A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 ARG 126 126 126 ARG ARG A . n A 1 127 LYS 127 127 127 LYS LYS A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 ASN 133 133 133 ASN ASN A . n A 1 134 HIS 134 134 134 HIS HIS A . n A 1 135 HIS 135 135 135 HIS HIS A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 GLY 139 139 139 GLY GLY A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 TYR 142 142 142 TYR TYR A . n A 1 143 PHE 143 143 143 PHE PHE A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 ILE 150 150 150 ILE ILE A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 ARG 152 152 152 ARG ARG A . n A 1 153 GLU 153 153 153 GLU GLU A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 MET 158 158 158 MET MET A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 VAL 162 162 162 VAL VAL A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ASN 164 164 164 ASN ASN A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 LYS 167 167 167 LYS LYS A . n A 1 168 LYS 168 168 168 LYS LYS A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 ASP 170 170 170 ASP ASP A . n A 1 171 SER 171 171 171 SER SER A . n A 1 172 GLU 172 172 172 GLU GLU A . n A 1 173 TYR 173 173 173 TYR TYR A . n A 1 174 ILE 174 174 174 ILE ILE A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 CYS 178 178 178 CYS CYS A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PHE 181 181 181 PHE PHE A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 GLY 184 184 184 GLY GLY A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 SER 187 187 187 SER SER A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 GLY 189 189 189 GLY GLY A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 MET 191 191 191 MET MET A . n A 1 192 ASP 192 192 192 ASP ASP A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 THR 196 196 196 THR THR A . n A 1 197 HIS 197 197 197 HIS HIS A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 PHE 200 200 200 PHE PHE A . n A 1 201 THR 201 201 201 THR THR A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 SER 204 204 204 SER SER A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 PRO 208 208 208 PRO PRO A . n A 1 209 LYS 209 209 209 LYS LYS A . n A 1 210 LEU 210 210 210 LEU LEU A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 HIS 212 212 212 HIS HIS A . n A 1 213 GLN 213 213 213 GLN GLN A . n A 1 214 VAL 214 214 214 VAL VAL A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 GLU 216 216 216 GLU GLU A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 PHE 223 223 223 PHE PHE A . n A 1 224 ILE 224 224 224 ILE ILE A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 LEU 228 228 228 LEU LEU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 LYS 234 234 234 LYS LYS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 MET 236 236 236 MET MET A . n A 1 237 GLY 237 237 237 GLY GLY A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 LEU 241 241 241 LEU LEU A . n A 1 242 PRO 242 242 242 PRO PRO A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 ASN 245 245 245 ASN ASN A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 GLU 247 247 247 GLU GLU A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 PRO 251 251 251 PRO PRO A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ARG 253 253 253 ARG ARG A . n A 1 254 ARG 254 254 254 ARG ARG A . n A 1 255 ILE 255 255 255 ILE ILE A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ILE 260 260 260 ILE ILE A . n A 1 261 PRO 261 261 261 PRO PRO A . n A 1 262 LYS 262 262 262 LYS LYS A . n A 1 263 ASP 263 263 263 ASP ASP A . n A 1 264 GLN 264 264 264 GLN GLN A . n A 1 265 TYR 265 265 265 TYR TYR A . n A 1 266 TYR 266 266 266 TYR TYR A . n A 1 267 CYS 267 267 267 CYS CYS A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 TYR 271 271 271 TYR TYR A . n A 1 272 PHE 272 272 272 PHE PHE A . n A 1 273 THR 273 273 273 THR THR A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 SER 275 275 275 SER SER A . n A 1 276 ASP 276 276 276 ASP ASP A . n A 1 277 ILE 277 277 277 ILE ILE A . n A 1 278 PHE 278 278 278 PHE PHE A . n A 1 279 ASN 279 279 279 ASN ASN A . n A 1 280 LYS 280 280 280 LYS LYS A . n A 1 281 ASN 281 281 281 ASN ASN A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 ALA 284 284 284 ALA ALA A . n A 1 285 HIS 285 285 285 HIS HIS A . n A 1 286 ALA 286 286 286 ALA ALA A . n A 1 287 LEU 287 287 287 LEU LEU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 PHE 291 291 291 PHE PHE A . n A 1 292 THR 292 292 292 THR THR A . n A 1 293 ILE 293 293 293 ILE ILE A . n A 1 294 ASN 294 294 294 ASN ASN A . n A 1 295 GLU 295 295 295 GLU GLU A . n A 1 296 TYR 296 296 296 TYR TYR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 ARG 299 299 299 ARG ARG A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 VAL 303 303 303 VAL VAL A . n A 1 304 THR 304 304 304 THR THR A . n A 1 305 GLY 305 305 305 GLY GLY A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 ALA 307 307 307 ALA ALA A . n A 1 308 GLY 308 308 308 GLY GLY A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 PRO 310 310 310 PRO PRO A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 PRO 312 312 312 PRO PRO A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 SER 315 315 315 SER SER A . n A 1 316 GLU 316 316 316 GLU GLU A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 ASP 318 318 318 ASP ASP A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 ASP 321 321 321 ASP ASP A . n A 1 322 TYR 322 322 322 TYR TYR A . n A 1 323 ILE 323 323 323 ILE ILE A . n A 1 324 GLN 324 324 324 GLN GLN A . n A 1 325 TRP 325 325 325 TRP TRP A . n A 1 326 LYS 326 326 326 LYS LYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 ARG 328 328 328 ARG ARG A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 PRO 330 330 330 PRO PRO A . n A 1 331 LYS 331 331 331 LYS LYS A . n A 1 332 ASP 332 332 332 ASP ASP A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 GLU 335 335 335 GLU GLU A . n A 1 336 HIS 336 336 ? ? ? A . n A 1 337 HIS 337 337 ? ? ? A . n A 1 338 HIS 338 338 ? ? ? A . n A 1 339 HIS 339 339 ? ? ? A . n A 1 340 HIS 340 340 ? ? ? A . n A 1 341 HIS 341 341 ? ? ? A . n B 2 1 DG 1 1 1 DG DG D . n B 2 2 DT 2 2 2 DT DT D . n B 2 3 DC 3 3 3 DC DC D . n B 2 4 DG 4 4 4 DG DG D . n B 2 5 DG 5 5 5 DG DG D . n C 3 1 DC 1 1 1 DC DC P . n C 3 2 DT 2 2 2 DT DT P . n C 3 3 DG 3 3 3 DG DG P . n C 3 4 DA 4 4 4 DA DA P . n C 3 5 DT 5 5 5 DT DT P . n C 3 6 DG 6 6 6 DG DG P . n C 3 7 DC 7 7 7 DC DC P . n C 3 8 DG 8 8 8 DG DG P . n C 3 9 DC 9 9 9 DC DC P . n C 3 10 DC 10 10 10 DC DC P . n C 3 11 DT 11 11 11 DT DT P . n D 4 1 DC 1 1 1 DC DC T . n D 4 2 DC 2 2 2 DC DC T . n D 4 3 DG 3 3 3 DG DG T . n D 4 4 DA 4 4 4 DA DA T . n D 4 5 DC 5 5 5 DC DC T . n D 4 6 DA 6 6 6 DA DA T . n D 4 7 8OG 7 7 7 8OG 8OG T . n D 4 8 DG 8 8 8 DG DG T . n D 4 9 DC 9 9 9 DC DC T . n D 4 10 DG 10 10 10 DG DG T . n D 4 11 DC 11 11 11 DC DC T . n D 4 12 DA 12 12 12 DA DA T . n D 4 13 DT 13 13 13 DT DT T . n D 4 14 DC 14 14 14 DC DC T . n D 4 15 DA 15 15 15 DA DA T . n D 4 16 DG 16 16 16 DG DG T . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 401 400 MG MG A . F 5 MG 1 402 401 MG MG A . G 5 MG 1 403 403 MG MG A . H 5 MG 1 404 405 MG MG A . I 6 CL 1 405 407 CL CL A . J 6 CL 1 406 408 CL CL A . K 7 IMD 1 407 410 IMD IMD A . L 8 PPV 1 408 12 PPV PPV A . M 5 MG 1 101 402 MG MG P . N 5 MG 1 102 404 MG MG P . O 9 HOH 1 501 2 HOH HOH A . O 9 HOH 2 502 146 HOH HOH A . O 9 HOH 3 503 66 HOH HOH A . O 9 HOH 4 504 9 HOH HOH A . O 9 HOH 5 505 25 HOH HOH A . O 9 HOH 6 506 112 HOH HOH A . O 9 HOH 7 507 76 HOH HOH A . O 9 HOH 8 508 26 HOH HOH A . O 9 HOH 9 509 8 HOH HOH A . O 9 HOH 10 510 144 HOH HOH A . O 9 HOH 11 511 35 HOH HOH A . O 9 HOH 12 512 4 HOH HOH A . O 9 HOH 13 513 138 HOH HOH A . O 9 HOH 14 514 77 HOH HOH A . O 9 HOH 15 515 122 HOH HOH A . O 9 HOH 16 516 20 HOH HOH A . O 9 HOH 17 517 61 HOH HOH A . O 9 HOH 18 518 24 HOH HOH A . O 9 HOH 19 519 64 HOH HOH A . O 9 HOH 20 520 111 HOH HOH A . O 9 HOH 21 521 84 HOH HOH A . O 9 HOH 22 522 70 HOH HOH A . O 9 HOH 23 523 130 HOH HOH A . O 9 HOH 24 524 40 HOH HOH A . O 9 HOH 25 525 56 HOH HOH A . O 9 HOH 26 526 33 HOH HOH A . O 9 HOH 27 527 142 HOH HOH A . O 9 HOH 28 528 73 HOH HOH A . O 9 HOH 29 529 12 HOH HOH A . O 9 HOH 30 530 60 HOH HOH A . O 9 HOH 31 531 103 HOH HOH A . O 9 HOH 32 532 94 HOH HOH A . O 9 HOH 33 533 125 HOH HOH A . O 9 HOH 34 534 71 HOH HOH A . O 9 HOH 35 535 58 HOH HOH A . O 9 HOH 36 536 18 HOH HOH A . O 9 HOH 37 537 52 HOH HOH A . O 9 HOH 38 538 106 HOH HOH A . O 9 HOH 39 539 30 HOH HOH A . O 9 HOH 40 540 69 HOH HOH A . O 9 HOH 41 541 53 HOH HOH A . O 9 HOH 42 542 113 HOH HOH A . O 9 HOH 43 543 97 HOH HOH A . O 9 HOH 44 544 102 HOH HOH A . O 9 HOH 45 545 143 HOH HOH A . O 9 HOH 46 546 95 HOH HOH A . O 9 HOH 47 547 57 HOH HOH A . O 9 HOH 48 548 105 HOH HOH A . O 9 HOH 49 549 141 HOH HOH A . O 9 HOH 50 550 59 HOH HOH A . O 9 HOH 51 551 80 HOH HOH A . O 9 HOH 52 552 67 HOH HOH A . O 9 HOH 53 553 27 HOH HOH A . O 9 HOH 54 554 45 HOH HOH A . O 9 HOH 55 555 74 HOH HOH A . O 9 HOH 56 556 147 HOH HOH A . O 9 HOH 57 557 65 HOH HOH A . O 9 HOH 58 558 5 HOH HOH A . O 9 HOH 59 559 16 HOH HOH A . O 9 HOH 60 560 49 HOH HOH A . O 9 HOH 61 561 43 HOH HOH A . O 9 HOH 62 562 50 HOH HOH A . O 9 HOH 63 563 85 HOH HOH A . O 9 HOH 64 564 1 HOH HOH A . O 9 HOH 65 565 41 HOH HOH A . O 9 HOH 66 566 75 HOH HOH A . O 9 HOH 67 567 21 HOH HOH A . O 9 HOH 68 568 120 HOH HOH A . O 9 HOH 69 569 96 HOH HOH A . O 9 HOH 70 570 101 HOH HOH A . O 9 HOH 71 571 110 HOH HOH A . O 9 HOH 72 572 51 HOH HOH A . O 9 HOH 73 573 140 HOH HOH A . O 9 HOH 74 574 68 HOH HOH A . O 9 HOH 75 575 14 HOH HOH A . O 9 HOH 76 576 63 HOH HOH A . O 9 HOH 77 577 44 HOH HOH A . O 9 HOH 78 578 116 HOH HOH A . O 9 HOH 79 579 123 HOH HOH A . O 9 HOH 80 580 124 HOH HOH A . O 9 HOH 81 581 107 HOH HOH A . O 9 HOH 82 582 6 HOH HOH A . O 9 HOH 83 583 62 HOH HOH A . O 9 HOH 84 584 100 HOH HOH A . O 9 HOH 85 585 72 HOH HOH A . O 9 HOH 86 586 31 HOH HOH A . O 9 HOH 87 587 104 HOH HOH A . O 9 HOH 88 588 32 HOH HOH A . O 9 HOH 89 589 29 HOH HOH A . O 9 HOH 90 590 23 HOH HOH A . O 9 HOH 91 591 79 HOH HOH A . O 9 HOH 92 592 47 HOH HOH A . O 9 HOH 93 593 115 HOH HOH A . O 9 HOH 94 594 46 HOH HOH A . O 9 HOH 95 595 7 HOH HOH A . O 9 HOH 96 596 83 HOH HOH A . O 9 HOH 97 597 148 HOH HOH A . O 9 HOH 98 598 98 HOH HOH A . O 9 HOH 99 599 37 HOH HOH A . O 9 HOH 100 600 99 HOH HOH A . O 9 HOH 101 601 119 HOH HOH A . O 9 HOH 102 602 139 HOH HOH A . O 9 HOH 103 603 10 HOH HOH A . O 9 HOH 104 604 42 HOH HOH A . O 9 HOH 105 605 114 HOH HOH A . O 9 HOH 106 606 36 HOH HOH A . O 9 HOH 107 607 127 HOH HOH A . O 9 HOH 108 608 82 HOH HOH A . O 9 HOH 109 609 22 HOH HOH A . O 9 HOH 110 610 15 HOH HOH A . O 9 HOH 111 611 34 HOH HOH A . O 9 HOH 112 612 81 HOH HOH A . O 9 HOH 113 613 145 HOH HOH A . O 9 HOH 114 614 19 HOH HOH A . O 9 HOH 115 615 11 HOH HOH A . O 9 HOH 116 616 121 HOH HOH A . O 9 HOH 117 617 126 HOH HOH A . P 9 HOH 1 101 39 HOH HOH D . Q 9 HOH 1 201 28 HOH HOH P . Q 9 HOH 2 202 131 HOH HOH P . Q 9 HOH 3 203 3 HOH HOH P . Q 9 HOH 4 204 133 HOH HOH P . Q 9 HOH 5 205 135 HOH HOH P . Q 9 HOH 6 206 38 HOH HOH P . Q 9 HOH 7 207 128 HOH HOH P . R 9 HOH 1 101 137 HOH HOH T . R 9 HOH 2 102 86 HOH HOH T . R 9 HOH 3 103 117 HOH HOH T . R 9 HOH 4 104 89 HOH HOH T . R 9 HOH 5 105 91 HOH HOH T . R 9 HOH 6 106 109 HOH HOH T . R 9 HOH 7 107 149 HOH HOH T . R 9 HOH 8 108 87 HOH HOH T . R 9 HOH 9 109 88 HOH HOH T . R 9 HOH 10 110 92 HOH HOH T . R 9 HOH 11 111 118 HOH HOH T . R 9 HOH 12 112 136 HOH HOH T . R 9 HOH 13 113 48 HOH HOH T . R 9 HOH 14 114 54 HOH HOH T . R 9 HOH 15 115 90 HOH HOH T . R 9 HOH 16 116 55 HOH HOH T . R 9 HOH 17 117 129 HOH HOH T . R 9 HOH 18 118 93 HOH HOH T . R 9 HOH 19 119 132 HOH HOH T . R 9 HOH 20 120 134 HOH HOH T . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7020 ? 1 MORE -105 ? 1 'SSA (A^2)' 19640 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A LYS 60 ? A LYS 60 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 O ? A LEU 62 ? A LEU 62 ? 1_555 94.1 ? 2 O ? A LYS 60 ? A LYS 60 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 93.0 ? 3 O ? A LEU 62 ? A LEU 62 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 O ? A VAL 65 ? A VAL 65 ? 1_555 92.0 ? 4 O ? A LYS 60 ? A LYS 60 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 178.4 ? 5 O ? A LEU 62 ? A LEU 62 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 87.1 ? 6 O ? A VAL 65 ? A VAL 65 ? 1_555 MG ? H MG . ? A MG 404 ? 1_555 OP1 ? B DC 3 ? D DC 3 ? 1_555 85.8 ? 7 O ? A THR 101 ? A THR 101 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? A VAL 103 ? A VAL 103 ? 1_555 94.9 ? 8 O ? A THR 101 ? A THR 101 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 90.2 ? 9 O ? A VAL 103 ? A VAL 103 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? A ILE 106 ? A ILE 106 ? 1_555 91.3 ? 10 O ? A THR 101 ? A THR 101 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? O HOH . ? A HOH 589 ? 1_555 80.3 ? 11 O ? A VAL 103 ? A VAL 103 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? O HOH . ? A HOH 589 ? 1_555 94.9 ? 12 O ? A ILE 106 ? A ILE 106 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? O HOH . ? A HOH 589 ? 1_555 169.1 ? 13 O ? A THR 101 ? A THR 101 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 OP1 ? C DC 9 ? P DC 9 ? 1_555 161.6 ? 14 O ? A VAL 103 ? A VAL 103 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 OP1 ? C DC 9 ? P DC 9 ? 1_555 99.4 ? 15 O ? A ILE 106 ? A ILE 106 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 OP1 ? C DC 9 ? P DC 9 ? 1_555 100.9 ? 16 O ? O HOH . ? A HOH 589 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 OP1 ? C DC 9 ? P DC 9 ? 1_555 86.9 ? 17 O ? A THR 101 ? A THR 101 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? Q HOH . ? P HOH 201 ? 1_555 81.9 ? 18 O ? A VAL 103 ? A VAL 103 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? Q HOH . ? P HOH 201 ? 1_555 176.2 ? 19 O ? A ILE 106 ? A ILE 106 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? Q HOH . ? P HOH 201 ? 1_555 90.8 ? 20 O ? O HOH . ? A HOH 589 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? Q HOH . ? P HOH 201 ? 1_555 82.6 ? 21 OP1 ? C DC 9 ? P DC 9 ? 1_555 MG ? G MG . ? A MG 403 ? 1_555 O ? Q HOH . ? P HOH 201 ? 1_555 83.3 ? 22 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 92.4 ? 23 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O11 ? L PPV . ? A PPV 408 ? 1_555 171.6 ? 24 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O11 ? L PPV . ? A PPV 408 ? 1_555 93.0 ? 25 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O12 ? L PPV . ? A PPV 408 ? 1_555 97.0 ? 26 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O12 ? L PPV . ? A PPV 408 ? 1_555 164.3 ? 27 O11 ? L PPV . ? A PPV 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O12 ? L PPV . ? A PPV 408 ? 1_555 76.3 ? 28 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? O HOH . ? A HOH 558 ? 1_555 86.8 ? 29 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? O HOH . ? A HOH 558 ? 1_555 88.2 ? 30 O11 ? L PPV . ? A PPV 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? O HOH . ? A HOH 558 ? 1_555 87.1 ? 31 O12 ? L PPV . ? A PPV 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 O ? O HOH . ? A HOH 558 ? 1_555 80.0 ? 32 OD1 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 91.5 ? 33 OD2 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 88.1 ? 34 O11 ? L PPV . ? A PPV 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 95.0 ? 35 O12 ? L PPV . ? A PPV 408 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 104.0 ? 36 O ? O HOH . ? A HOH 558 ? 1_555 MG ? E MG . ? A MG 401 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 175.9 ? 37 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 110.8 ? 38 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 102.7 ? 39 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 106.7 ? 40 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 121.9 ? 41 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 112.9 ? 42 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 "O3'" ? C DC 10 ? P DC 10 ? 1_555 99.5 ? 43 OD2 ? A ASP 190 ? A ASP 190 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 85.1 ? 44 OD1 ? A ASP 192 ? A ASP 192 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 87.1 ? 45 OD2 ? A ASP 256 ? A ASP 256 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 160.0 ? 46 "O3'" ? C DC 10 ? P DC 10 ? 1_555 MG ? F MG . ? A MG 402 ? 1_555 OP1 ? C DT 11 ? P DT 11 ? 1_555 61.2 ? 47 O21 ? L PPV . ? A PPV 408 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? O HOH . ? A HOH 501 ? 1_555 91.6 ? 48 O21 ? L PPV . ? A PPV 408 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? O HOH . ? A HOH 564 ? 1_555 85.8 ? 49 O ? O HOH . ? A HOH 501 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? O HOH . ? A HOH 564 ? 1_555 105.7 ? 50 O21 ? L PPV . ? A PPV 408 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 OP2 ? C DT 11 ? P DT 11 ? 1_555 88.7 ? 51 O ? O HOH . ? A HOH 501 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 OP2 ? C DT 11 ? P DT 11 ? 1_555 157.6 ? 52 O ? O HOH . ? A HOH 564 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 OP2 ? C DT 11 ? P DT 11 ? 1_555 96.6 ? 53 O21 ? L PPV . ? A PPV 408 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? Q HOH . ? P HOH 203 ? 1_555 93.5 ? 54 O ? O HOH . ? A HOH 501 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? Q HOH . ? P HOH 203 ? 1_555 83.5 ? 55 O ? O HOH . ? A HOH 564 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? Q HOH . ? P HOH 203 ? 1_555 170.8 ? 56 OP2 ? C DT 11 ? P DT 11 ? 1_555 MG ? M MG . ? P MG 101 ? 1_555 O ? Q HOH . ? P HOH 203 ? 1_555 74.2 ? 57 O ? Q HOH . ? P HOH 202 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? Q HOH . ? P HOH 204 ? 1_555 90.8 ? 58 O ? Q HOH . ? P HOH 202 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? R HOH . ? T HOH 119 ? 1_555 77.2 ? 59 O ? Q HOH . ? P HOH 204 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? R HOH . ? T HOH 119 ? 1_555 166.6 ? 60 O ? Q HOH . ? P HOH 202 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? R HOH . ? T HOH 120 ? 1_555 152.7 ? 61 O ? Q HOH . ? P HOH 204 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? R HOH . ? T HOH 120 ? 1_555 101.7 ? 62 O ? R HOH . ? T HOH 119 ? 1_555 MG ? N MG . ? P MG 102 ? 1_555 O ? R HOH . ? T HOH 120 ? 1_555 91.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-19 2 'Structure model' 1 1 2017-07-26 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2022-03-23 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' software 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_audit_support 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' struct_conn 7 4 'Structure model' struct_conn_type 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 3 'Structure model' '_software.classification' 5 4 'Structure model' '_database_2.pdbx_DOI' 6 4 'Structure model' '_database_2.pdbx_database_accession' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.value' 22 4 'Structure model' '_struct_conn.conn_type_id' 23 4 'Structure model' '_struct_conn.id' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 40 4 'Structure model' '_struct_conn_type.id' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0073 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O32 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 PPV _pdbx_validate_close_contact.auth_seq_id_1 408 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 501 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.05 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.476 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.131 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" T DC 1 ? ? "C4'" T DC 1 ? ? "C3'" T DC 1 ? ? 123.86 115.70 8.16 1.20 N 2 1 "C5'" T DC 1 ? ? "C4'" T DC 1 ? ? "O4'" T DC 1 ? ? 118.93 109.80 9.13 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 12 ? ? -118.07 50.96 2 1 CYS A 178 ? ? -118.93 -137.57 3 1 SER A 275 ? ? -58.01 170.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 248 ? CG ? A LYS 248 CG 2 1 Y 1 A LYS 248 ? CD ? A LYS 248 CD 3 1 Y 1 A LYS 248 ? CE ? A LYS 248 CE 4 1 Y 1 A LYS 248 ? NZ ? A LYS 248 NZ 5 1 Y 1 A VAL 303 ? CG1 ? A VAL 303 CG1 6 1 Y 1 A VAL 303 ? CG2 ? A VAL 303 CG2 7 1 Y 1 A THR 304 ? OG1 ? A THR 304 OG1 8 1 Y 1 A THR 304 ? CG2 ? A THR 304 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A LYS 3 ? A LYS 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A LYS 5 ? A LYS 5 6 1 Y 1 A ALA 6 ? A ALA 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLN 8 ? A GLN 8 9 1 Y 1 A GLU 9 ? A GLU 9 10 1 Y 1 A HIS 336 ? A HIS 336 11 1 Y 1 A HIS 337 ? A HIS 337 12 1 Y 1 A HIS 338 ? A HIS 338 13 1 Y 1 A HIS 339 ? A HIS 339 14 1 Y 1 A HIS 340 ? A HIS 340 15 1 Y 1 A HIS 341 ? A HIS 341 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8OG OP3 O N N 1 8OG P P N N 2 8OG OP1 O N N 3 8OG OP2 O N N 4 8OG "O5'" O N N 5 8OG "C5'" C N N 6 8OG "C4'" C N R 7 8OG "O4'" O N N 8 8OG "C3'" C N S 9 8OG "O3'" O N N 10 8OG "C2'" C N N 11 8OG "C1'" C N R 12 8OG N9 N N N 13 8OG C8 C N N 14 8OG N7 N N N 15 8OG C5 C N N 16 8OG C6 C N N 17 8OG O6 O N N 18 8OG N1 N N N 19 8OG C2 C N N 20 8OG N2 N N N 21 8OG N3 N N N 22 8OG C4 C N N 23 8OG O8 O N N 24 8OG HOP3 H N N 25 8OG HOP2 H N N 26 8OG "H5'" H N N 27 8OG "H5''" H N N 28 8OG "H4'" H N N 29 8OG "H3'" H N N 30 8OG "HO3'" H N N 31 8OG "H2'" H N N 32 8OG "H2''" H N N 33 8OG "H1'" H N N 34 8OG H7 H N N 35 8OG H1 H N N 36 8OG H21 H N N 37 8OG H22 H N N 38 ALA N N N N 39 ALA CA C N S 40 ALA C C N N 41 ALA O O N N 42 ALA CB C N N 43 ALA OXT O N N 44 ALA H H N N 45 ALA H2 H N N 46 ALA HA H N N 47 ALA HB1 H N N 48 ALA HB2 H N N 49 ALA HB3 H N N 50 ALA HXT H N N 51 ARG N N N N 52 ARG CA C N S 53 ARG C C N N 54 ARG O O N N 55 ARG CB C N N 56 ARG CG C N N 57 ARG CD C N N 58 ARG NE N N N 59 ARG CZ C N N 60 ARG NH1 N N N 61 ARG NH2 N N N 62 ARG OXT O N N 63 ARG H H N N 64 ARG H2 H N N 65 ARG HA H N N 66 ARG HB2 H N N 67 ARG HB3 H N N 68 ARG HG2 H N N 69 ARG HG3 H N N 70 ARG HD2 H N N 71 ARG HD3 H N N 72 ARG HE H N N 73 ARG HH11 H N N 74 ARG HH12 H N N 75 ARG HH21 H N N 76 ARG HH22 H N N 77 ARG HXT H N N 78 ASN N N N N 79 ASN CA C N S 80 ASN C C N N 81 ASN O O N N 82 ASN CB C N N 83 ASN CG C N N 84 ASN OD1 O N N 85 ASN ND2 N N N 86 ASN OXT O N N 87 ASN H H N N 88 ASN H2 H N N 89 ASN HA H N N 90 ASN HB2 H N N 91 ASN HB3 H N N 92 ASN HD21 H N N 93 ASN HD22 H N N 94 ASN HXT H N N 95 ASP N N N N 96 ASP CA C N S 97 ASP C C N N 98 ASP O O N N 99 ASP CB C N N 100 ASP CG C N N 101 ASP OD1 O N N 102 ASP OD2 O N N 103 ASP OXT O N N 104 ASP H H N N 105 ASP H2 H N N 106 ASP HA H N N 107 ASP HB2 H N N 108 ASP HB3 H N N 109 ASP HD2 H N N 110 ASP HXT H N N 111 CL CL CL N N 112 CYS N N N N 113 CYS CA C N R 114 CYS C C N N 115 CYS O O N N 116 CYS CB C N N 117 CYS SG S N N 118 CYS OXT O N N 119 CYS H H N N 120 CYS H2 H N N 121 CYS HA H N N 122 CYS HB2 H N N 123 CYS HB3 H N N 124 CYS HG H N N 125 CYS HXT H N N 126 DA OP3 O N N 127 DA P P N N 128 DA OP1 O N N 129 DA OP2 O N N 130 DA "O5'" O N N 131 DA "C5'" C N N 132 DA "C4'" C N R 133 DA "O4'" O N N 134 DA "C3'" C N S 135 DA "O3'" O N N 136 DA "C2'" C N N 137 DA "C1'" C N R 138 DA N9 N Y N 139 DA C8 C Y N 140 DA N7 N Y N 141 DA C5 C Y N 142 DA C6 C Y N 143 DA N6 N N N 144 DA N1 N Y N 145 DA C2 C Y N 146 DA N3 N Y N 147 DA C4 C Y N 148 DA HOP3 H N N 149 DA HOP2 H N N 150 DA "H5'" H N N 151 DA "H5''" H N N 152 DA "H4'" H N N 153 DA "H3'" H N N 154 DA "HO3'" H N N 155 DA "H2'" H N N 156 DA "H2''" H N N 157 DA "H1'" H N N 158 DA H8 H N N 159 DA H61 H N N 160 DA H62 H N N 161 DA H2 H N N 162 DC OP3 O N N 163 DC P P N N 164 DC OP1 O N N 165 DC OP2 O N N 166 DC "O5'" O N N 167 DC "C5'" C N N 168 DC "C4'" C N R 169 DC "O4'" O N N 170 DC "C3'" C N S 171 DC "O3'" O N N 172 DC "C2'" C N N 173 DC "C1'" C N R 174 DC N1 N N N 175 DC C2 C N N 176 DC O2 O N N 177 DC N3 N N N 178 DC C4 C N N 179 DC N4 N N N 180 DC C5 C N N 181 DC C6 C N N 182 DC HOP3 H N N 183 DC HOP2 H N N 184 DC "H5'" H N N 185 DC "H5''" H N N 186 DC "H4'" H N N 187 DC "H3'" H N N 188 DC "HO3'" H N N 189 DC "H2'" H N N 190 DC "H2''" H N N 191 DC "H1'" H N N 192 DC H41 H N N 193 DC H42 H N N 194 DC H5 H N N 195 DC H6 H N N 196 DG OP3 O N N 197 DG P P N N 198 DG OP1 O N N 199 DG OP2 O N N 200 DG "O5'" O N N 201 DG "C5'" C N N 202 DG "C4'" C N R 203 DG "O4'" O N N 204 DG "C3'" C N S 205 DG "O3'" O N N 206 DG "C2'" C N N 207 DG "C1'" C N R 208 DG N9 N Y N 209 DG C8 C Y N 210 DG N7 N Y N 211 DG C5 C Y N 212 DG C6 C N N 213 DG O6 O N N 214 DG N1 N N N 215 DG C2 C N N 216 DG N2 N N N 217 DG N3 N N N 218 DG C4 C Y N 219 DG HOP3 H N N 220 DG HOP2 H N N 221 DG "H5'" H N N 222 DG "H5''" H N N 223 DG "H4'" H N N 224 DG "H3'" H N N 225 DG "HO3'" H N N 226 DG "H2'" H N N 227 DG "H2''" H N N 228 DG "H1'" H N N 229 DG H8 H N N 230 DG H1 H N N 231 DG H21 H N N 232 DG H22 H N N 233 DT OP3 O N N 234 DT P P N N 235 DT OP1 O N N 236 DT OP2 O N N 237 DT "O5'" O N N 238 DT "C5'" C N N 239 DT "C4'" C N R 240 DT "O4'" O N N 241 DT "C3'" C N S 242 DT "O3'" O N N 243 DT "C2'" C N N 244 DT "C1'" C N R 245 DT N1 N N N 246 DT C2 C N N 247 DT O2 O N N 248 DT N3 N N N 249 DT C4 C N N 250 DT O4 O N N 251 DT C5 C N N 252 DT C7 C N N 253 DT C6 C N N 254 DT HOP3 H N N 255 DT HOP2 H N N 256 DT "H5'" H N N 257 DT "H5''" H N N 258 DT "H4'" H N N 259 DT "H3'" H N N 260 DT "HO3'" H N N 261 DT "H2'" H N N 262 DT "H2''" H N N 263 DT "H1'" H N N 264 DT H3 H N N 265 DT H71 H N N 266 DT H72 H N N 267 DT H73 H N N 268 DT H6 H N N 269 GLN N N N N 270 GLN CA C N S 271 GLN C C N N 272 GLN O O N N 273 GLN CB C N N 274 GLN CG C N N 275 GLN CD C N N 276 GLN OE1 O N N 277 GLN NE2 N N N 278 GLN OXT O N N 279 GLN H H N N 280 GLN H2 H N N 281 GLN HA H N N 282 GLN HB2 H N N 283 GLN HB3 H N N 284 GLN HG2 H N N 285 GLN HG3 H N N 286 GLN HE21 H N N 287 GLN HE22 H N N 288 GLN HXT H N N 289 GLU N N N N 290 GLU CA C N S 291 GLU C C N N 292 GLU O O N N 293 GLU CB C N N 294 GLU CG C N N 295 GLU CD C N N 296 GLU OE1 O N N 297 GLU OE2 O N N 298 GLU OXT O N N 299 GLU H H N N 300 GLU H2 H N N 301 GLU HA H N N 302 GLU HB2 H N N 303 GLU HB3 H N N 304 GLU HG2 H N N 305 GLU HG3 H N N 306 GLU HE2 H N N 307 GLU HXT H N N 308 GLY N N N N 309 GLY CA C N N 310 GLY C C N N 311 GLY O O N N 312 GLY OXT O N N 313 GLY H H N N 314 GLY H2 H N N 315 GLY HA2 H N N 316 GLY HA3 H N N 317 GLY HXT H N N 318 HIS N N N N 319 HIS CA C N S 320 HIS C C N N 321 HIS O O N N 322 HIS CB C N N 323 HIS CG C Y N 324 HIS ND1 N Y N 325 HIS CD2 C Y N 326 HIS CE1 C Y N 327 HIS NE2 N Y N 328 HIS OXT O N N 329 HIS H H N N 330 HIS H2 H N N 331 HIS HA H N N 332 HIS HB2 H N N 333 HIS HB3 H N N 334 HIS HD1 H N N 335 HIS HD2 H N N 336 HIS HE1 H N N 337 HIS HE2 H N N 338 HIS HXT H N N 339 HOH O O N N 340 HOH H1 H N N 341 HOH H2 H N N 342 ILE N N N N 343 ILE CA C N S 344 ILE C C N N 345 ILE O O N N 346 ILE CB C N S 347 ILE CG1 C N N 348 ILE CG2 C N N 349 ILE CD1 C N N 350 ILE OXT O N N 351 ILE H H N N 352 ILE H2 H N N 353 ILE HA H N N 354 ILE HB H N N 355 ILE HG12 H N N 356 ILE HG13 H N N 357 ILE HG21 H N N 358 ILE HG22 H N N 359 ILE HG23 H N N 360 ILE HD11 H N N 361 ILE HD12 H N N 362 ILE HD13 H N N 363 ILE HXT H N N 364 IMD N1 N Y N 365 IMD C2 C Y N 366 IMD N3 N Y N 367 IMD C4 C Y N 368 IMD C5 C Y N 369 IMD HN1 H N N 370 IMD H2 H N N 371 IMD HN3 H N N 372 IMD H4 H N N 373 IMD H5 H N N 374 LEU N N N N 375 LEU CA C N S 376 LEU C C N N 377 LEU O O N N 378 LEU CB C N N 379 LEU CG C N N 380 LEU CD1 C N N 381 LEU CD2 C N N 382 LEU OXT O N N 383 LEU H H N N 384 LEU H2 H N N 385 LEU HA H N N 386 LEU HB2 H N N 387 LEU HB3 H N N 388 LEU HG H N N 389 LEU HD11 H N N 390 LEU HD12 H N N 391 LEU HD13 H N N 392 LEU HD21 H N N 393 LEU HD22 H N N 394 LEU HD23 H N N 395 LEU HXT H N N 396 LYS N N N N 397 LYS CA C N S 398 LYS C C N N 399 LYS O O N N 400 LYS CB C N N 401 LYS CG C N N 402 LYS CD C N N 403 LYS CE C N N 404 LYS NZ N N N 405 LYS OXT O N N 406 LYS H H N N 407 LYS H2 H N N 408 LYS HA H N N 409 LYS HB2 H N N 410 LYS HB3 H N N 411 LYS HG2 H N N 412 LYS HG3 H N N 413 LYS HD2 H N N 414 LYS HD3 H N N 415 LYS HE2 H N N 416 LYS HE3 H N N 417 LYS HZ1 H N N 418 LYS HZ2 H N N 419 LYS HZ3 H N N 420 LYS HXT H N N 421 MET N N N N 422 MET CA C N S 423 MET C C N N 424 MET O O N N 425 MET CB C N N 426 MET CG C N N 427 MET SD S N N 428 MET CE C N N 429 MET OXT O N N 430 MET H H N N 431 MET H2 H N N 432 MET HA H N N 433 MET HB2 H N N 434 MET HB3 H N N 435 MET HG2 H N N 436 MET HG3 H N N 437 MET HE1 H N N 438 MET HE2 H N N 439 MET HE3 H N N 440 MET HXT H N N 441 MG MG MG N N 442 PHE N N N N 443 PHE CA C N S 444 PHE C C N N 445 PHE O O N N 446 PHE CB C N N 447 PHE CG C Y N 448 PHE CD1 C Y N 449 PHE CD2 C Y N 450 PHE CE1 C Y N 451 PHE CE2 C Y N 452 PHE CZ C Y N 453 PHE OXT O N N 454 PHE H H N N 455 PHE H2 H N N 456 PHE HA H N N 457 PHE HB2 H N N 458 PHE HB3 H N N 459 PHE HD1 H N N 460 PHE HD2 H N N 461 PHE HE1 H N N 462 PHE HE2 H N N 463 PHE HZ H N N 464 PHE HXT H N N 465 PPV O11 O N N 466 PPV P1 P N N 467 PPV O21 O N N 468 PPV O31 O N N 469 PPV OPP O N N 470 PPV P2 P N N 471 PPV O12 O N N 472 PPV O22 O N N 473 PPV O32 O N N 474 PPV H11 H N N 475 PPV H21 H N N 476 PPV H12 H N N 477 PPV H32 H N N 478 PRO N N N N 479 PRO CA C N S 480 PRO C C N N 481 PRO O O N N 482 PRO CB C N N 483 PRO CG C N N 484 PRO CD C N N 485 PRO OXT O N N 486 PRO H H N N 487 PRO HA H N N 488 PRO HB2 H N N 489 PRO HB3 H N N 490 PRO HG2 H N N 491 PRO HG3 H N N 492 PRO HD2 H N N 493 PRO HD3 H N N 494 PRO HXT H N N 495 SER N N N N 496 SER CA C N S 497 SER C C N N 498 SER O O N N 499 SER CB C N N 500 SER OG O N N 501 SER OXT O N N 502 SER H H N N 503 SER H2 H N N 504 SER HA H N N 505 SER HB2 H N N 506 SER HB3 H N N 507 SER HG H N N 508 SER HXT H N N 509 THR N N N N 510 THR CA C N S 511 THR C C N N 512 THR O O N N 513 THR CB C N R 514 THR OG1 O N N 515 THR CG2 C N N 516 THR OXT O N N 517 THR H H N N 518 THR H2 H N N 519 THR HA H N N 520 THR HB H N N 521 THR HG1 H N N 522 THR HG21 H N N 523 THR HG22 H N N 524 THR HG23 H N N 525 THR HXT H N N 526 TRP N N N N 527 TRP CA C N S 528 TRP C C N N 529 TRP O O N N 530 TRP CB C N N 531 TRP CG C Y N 532 TRP CD1 C Y N 533 TRP CD2 C Y N 534 TRP NE1 N Y N 535 TRP CE2 C Y N 536 TRP CE3 C Y N 537 TRP CZ2 C Y N 538 TRP CZ3 C Y N 539 TRP CH2 C Y N 540 TRP OXT O N N 541 TRP H H N N 542 TRP H2 H N N 543 TRP HA H N N 544 TRP HB2 H N N 545 TRP HB3 H N N 546 TRP HD1 H N N 547 TRP HE1 H N N 548 TRP HE3 H N N 549 TRP HZ2 H N N 550 TRP HZ3 H N N 551 TRP HH2 H N N 552 TRP HXT H N N 553 TYR N N N N 554 TYR CA C N S 555 TYR C C N N 556 TYR O O N N 557 TYR CB C N N 558 TYR CG C Y N 559 TYR CD1 C Y N 560 TYR CD2 C Y N 561 TYR CE1 C Y N 562 TYR CE2 C Y N 563 TYR CZ C Y N 564 TYR OH O N N 565 TYR OXT O N N 566 TYR H H N N 567 TYR H2 H N N 568 TYR HA H N N 569 TYR HB2 H N N 570 TYR HB3 H N N 571 TYR HD1 H N N 572 TYR HD2 H N N 573 TYR HE1 H N N 574 TYR HE2 H N N 575 TYR HH H N N 576 TYR HXT H N N 577 VAL N N N N 578 VAL CA C N S 579 VAL C C N N 580 VAL O O N N 581 VAL CB C N N 582 VAL CG1 C N N 583 VAL CG2 C N N 584 VAL OXT O N N 585 VAL H H N N 586 VAL H2 H N N 587 VAL HA H N N 588 VAL HB H N N 589 VAL HG11 H N N 590 VAL HG12 H N N 591 VAL HG13 H N N 592 VAL HG21 H N N 593 VAL HG22 H N N 594 VAL HG23 H N N 595 VAL HXT H N N 596 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8OG OP3 P sing N N 1 8OG OP3 HOP3 sing N N 2 8OG P OP1 doub N N 3 8OG P OP2 sing N N 4 8OG P "O5'" sing N N 5 8OG OP2 HOP2 sing N N 6 8OG "O5'" "C5'" sing N N 7 8OG "C5'" "C4'" sing N N 8 8OG "C5'" "H5'" sing N N 9 8OG "C5'" "H5''" sing N N 10 8OG "C4'" "O4'" sing N N 11 8OG "C4'" "C3'" sing N N 12 8OG "C4'" "H4'" sing N N 13 8OG "O4'" "C1'" sing N N 14 8OG "C3'" "O3'" sing N N 15 8OG "C3'" "C2'" sing N N 16 8OG "C3'" "H3'" sing N N 17 8OG "O3'" "HO3'" sing N N 18 8OG "C2'" "C1'" sing N N 19 8OG "C2'" "H2'" sing N N 20 8OG "C2'" "H2''" sing N N 21 8OG "C1'" N9 sing N N 22 8OG "C1'" "H1'" sing N N 23 8OG N9 C8 sing N N 24 8OG N9 C4 sing N N 25 8OG C8 N7 sing N N 26 8OG C8 O8 doub N N 27 8OG N7 C5 sing N N 28 8OG N7 H7 sing N N 29 8OG C5 C6 sing N N 30 8OG C5 C4 doub N N 31 8OG C6 O6 doub N N 32 8OG C6 N1 sing N N 33 8OG N1 C2 sing N N 34 8OG N1 H1 sing N N 35 8OG C2 N2 sing N N 36 8OG C2 N3 doub N N 37 8OG N2 H21 sing N N 38 8OG N2 H22 sing N N 39 8OG N3 C4 sing N N 40 ALA N CA sing N N 41 ALA N H sing N N 42 ALA N H2 sing N N 43 ALA CA C sing N N 44 ALA CA CB sing N N 45 ALA CA HA sing N N 46 ALA C O doub N N 47 ALA C OXT sing N N 48 ALA CB HB1 sing N N 49 ALA CB HB2 sing N N 50 ALA CB HB3 sing N N 51 ALA OXT HXT sing N N 52 ARG N CA sing N N 53 ARG N H sing N N 54 ARG N H2 sing N N 55 ARG CA C sing N N 56 ARG CA CB sing N N 57 ARG CA HA sing N N 58 ARG C O doub N N 59 ARG C OXT sing N N 60 ARG CB CG sing N N 61 ARG CB HB2 sing N N 62 ARG CB HB3 sing N N 63 ARG CG CD sing N N 64 ARG CG HG2 sing N N 65 ARG CG HG3 sing N N 66 ARG CD NE sing N N 67 ARG CD HD2 sing N N 68 ARG CD HD3 sing N N 69 ARG NE CZ sing N N 70 ARG NE HE sing N N 71 ARG CZ NH1 sing N N 72 ARG CZ NH2 doub N N 73 ARG NH1 HH11 sing N N 74 ARG NH1 HH12 sing N N 75 ARG NH2 HH21 sing N N 76 ARG NH2 HH22 sing N N 77 ARG OXT HXT sing N N 78 ASN N CA sing N N 79 ASN N H sing N N 80 ASN N H2 sing N N 81 ASN CA C sing N N 82 ASN CA CB sing N N 83 ASN CA HA sing N N 84 ASN C O doub N N 85 ASN C OXT sing N N 86 ASN CB CG sing N N 87 ASN CB HB2 sing N N 88 ASN CB HB3 sing N N 89 ASN CG OD1 doub N N 90 ASN CG ND2 sing N N 91 ASN ND2 HD21 sing N N 92 ASN ND2 HD22 sing N N 93 ASN OXT HXT sing N N 94 ASP N CA sing N N 95 ASP N H sing N N 96 ASP N H2 sing N N 97 ASP CA C sing N N 98 ASP CA CB sing N N 99 ASP CA HA sing N N 100 ASP C O doub N N 101 ASP C OXT sing N N 102 ASP CB CG sing N N 103 ASP CB HB2 sing N N 104 ASP CB HB3 sing N N 105 ASP CG OD1 doub N N 106 ASP CG OD2 sing N N 107 ASP OD2 HD2 sing N N 108 ASP OXT HXT sing N N 109 CYS N CA sing N N 110 CYS N H sing N N 111 CYS N H2 sing N N 112 CYS CA C sing N N 113 CYS CA CB sing N N 114 CYS CA HA sing N N 115 CYS C O doub N N 116 CYS C OXT sing N N 117 CYS CB SG sing N N 118 CYS CB HB2 sing N N 119 CYS CB HB3 sing N N 120 CYS SG HG sing N N 121 CYS OXT HXT sing N N 122 DA OP3 P sing N N 123 DA OP3 HOP3 sing N N 124 DA P OP1 doub N N 125 DA P OP2 sing N N 126 DA P "O5'" sing N N 127 DA OP2 HOP2 sing N N 128 DA "O5'" "C5'" sing N N 129 DA "C5'" "C4'" sing N N 130 DA "C5'" "H5'" sing N N 131 DA "C5'" "H5''" sing N N 132 DA "C4'" "O4'" sing N N 133 DA "C4'" "C3'" sing N N 134 DA "C4'" "H4'" sing N N 135 DA "O4'" "C1'" sing N N 136 DA "C3'" "O3'" sing N N 137 DA "C3'" "C2'" sing N N 138 DA "C3'" "H3'" sing N N 139 DA "O3'" "HO3'" sing N N 140 DA "C2'" "C1'" sing N N 141 DA "C2'" "H2'" sing N N 142 DA "C2'" "H2''" sing N N 143 DA "C1'" N9 sing N N 144 DA "C1'" "H1'" sing N N 145 DA N9 C8 sing Y N 146 DA N9 C4 sing Y N 147 DA C8 N7 doub Y N 148 DA C8 H8 sing N N 149 DA N7 C5 sing Y N 150 DA C5 C6 sing Y N 151 DA C5 C4 doub Y N 152 DA C6 N6 sing N N 153 DA C6 N1 doub Y N 154 DA N6 H61 sing N N 155 DA N6 H62 sing N N 156 DA N1 C2 sing Y N 157 DA C2 N3 doub Y N 158 DA C2 H2 sing N N 159 DA N3 C4 sing Y N 160 DC OP3 P sing N N 161 DC OP3 HOP3 sing N N 162 DC P OP1 doub N N 163 DC P OP2 sing N N 164 DC P "O5'" sing N N 165 DC OP2 HOP2 sing N N 166 DC "O5'" "C5'" sing N N 167 DC "C5'" "C4'" sing N N 168 DC "C5'" "H5'" sing N N 169 DC "C5'" "H5''" sing N N 170 DC "C4'" "O4'" sing N N 171 DC "C4'" "C3'" sing N N 172 DC "C4'" "H4'" sing N N 173 DC "O4'" "C1'" sing N N 174 DC "C3'" "O3'" sing N N 175 DC "C3'" "C2'" sing N N 176 DC "C3'" "H3'" sing N N 177 DC "O3'" "HO3'" sing N N 178 DC "C2'" "C1'" sing N N 179 DC "C2'" "H2'" sing N N 180 DC "C2'" "H2''" sing N N 181 DC "C1'" N1 sing N N 182 DC "C1'" "H1'" sing N N 183 DC N1 C2 sing N N 184 DC N1 C6 sing N N 185 DC C2 O2 doub N N 186 DC C2 N3 sing N N 187 DC N3 C4 doub N N 188 DC C4 N4 sing N N 189 DC C4 C5 sing N N 190 DC N4 H41 sing N N 191 DC N4 H42 sing N N 192 DC C5 C6 doub N N 193 DC C5 H5 sing N N 194 DC C6 H6 sing N N 195 DG OP3 P sing N N 196 DG OP3 HOP3 sing N N 197 DG P OP1 doub N N 198 DG P OP2 sing N N 199 DG P "O5'" sing N N 200 DG OP2 HOP2 sing N N 201 DG "O5'" "C5'" sing N N 202 DG "C5'" "C4'" sing N N 203 DG "C5'" "H5'" sing N N 204 DG "C5'" "H5''" sing N N 205 DG "C4'" "O4'" sing N N 206 DG "C4'" "C3'" sing N N 207 DG "C4'" "H4'" sing N N 208 DG "O4'" "C1'" sing N N 209 DG "C3'" "O3'" sing N N 210 DG "C3'" "C2'" sing N N 211 DG "C3'" "H3'" sing N N 212 DG "O3'" "HO3'" sing N N 213 DG "C2'" "C1'" sing N N 214 DG "C2'" "H2'" sing N N 215 DG "C2'" "H2''" sing N N 216 DG "C1'" N9 sing N N 217 DG "C1'" "H1'" sing N N 218 DG N9 C8 sing Y N 219 DG N9 C4 sing Y N 220 DG C8 N7 doub Y N 221 DG C8 H8 sing N N 222 DG N7 C5 sing Y N 223 DG C5 C6 sing N N 224 DG C5 C4 doub Y N 225 DG C6 O6 doub N N 226 DG C6 N1 sing N N 227 DG N1 C2 sing N N 228 DG N1 H1 sing N N 229 DG C2 N2 sing N N 230 DG C2 N3 doub N N 231 DG N2 H21 sing N N 232 DG N2 H22 sing N N 233 DG N3 C4 sing N N 234 DT OP3 P sing N N 235 DT OP3 HOP3 sing N N 236 DT P OP1 doub N N 237 DT P OP2 sing N N 238 DT P "O5'" sing N N 239 DT OP2 HOP2 sing N N 240 DT "O5'" "C5'" sing N N 241 DT "C5'" "C4'" sing N N 242 DT "C5'" "H5'" sing N N 243 DT "C5'" "H5''" sing N N 244 DT "C4'" "O4'" sing N N 245 DT "C4'" "C3'" sing N N 246 DT "C4'" "H4'" sing N N 247 DT "O4'" "C1'" sing N N 248 DT "C3'" "O3'" sing N N 249 DT "C3'" "C2'" sing N N 250 DT "C3'" "H3'" sing N N 251 DT "O3'" "HO3'" sing N N 252 DT "C2'" "C1'" sing N N 253 DT "C2'" "H2'" sing N N 254 DT "C2'" "H2''" sing N N 255 DT "C1'" N1 sing N N 256 DT "C1'" "H1'" sing N N 257 DT N1 C2 sing N N 258 DT N1 C6 sing N N 259 DT C2 O2 doub N N 260 DT C2 N3 sing N N 261 DT N3 C4 sing N N 262 DT N3 H3 sing N N 263 DT C4 O4 doub N N 264 DT C4 C5 sing N N 265 DT C5 C7 sing N N 266 DT C5 C6 doub N N 267 DT C7 H71 sing N N 268 DT C7 H72 sing N N 269 DT C7 H73 sing N N 270 DT C6 H6 sing N N 271 GLN N CA sing N N 272 GLN N H sing N N 273 GLN N H2 sing N N 274 GLN CA C sing N N 275 GLN CA CB sing N N 276 GLN CA HA sing N N 277 GLN C O doub N N 278 GLN C OXT sing N N 279 GLN CB CG sing N N 280 GLN CB HB2 sing N N 281 GLN CB HB3 sing N N 282 GLN CG CD sing N N 283 GLN CG HG2 sing N N 284 GLN CG HG3 sing N N 285 GLN CD OE1 doub N N 286 GLN CD NE2 sing N N 287 GLN NE2 HE21 sing N N 288 GLN NE2 HE22 sing N N 289 GLN OXT HXT sing N N 290 GLU N CA sing N N 291 GLU N H sing N N 292 GLU N H2 sing N N 293 GLU CA C sing N N 294 GLU CA CB sing N N 295 GLU CA HA sing N N 296 GLU C O doub N N 297 GLU C OXT sing N N 298 GLU CB CG sing N N 299 GLU CB HB2 sing N N 300 GLU CB HB3 sing N N 301 GLU CG CD sing N N 302 GLU CG HG2 sing N N 303 GLU CG HG3 sing N N 304 GLU CD OE1 doub N N 305 GLU CD OE2 sing N N 306 GLU OE2 HE2 sing N N 307 GLU OXT HXT sing N N 308 GLY N CA sing N N 309 GLY N H sing N N 310 GLY N H2 sing N N 311 GLY CA C sing N N 312 GLY CA HA2 sing N N 313 GLY CA HA3 sing N N 314 GLY C O doub N N 315 GLY C OXT sing N N 316 GLY OXT HXT sing N N 317 HIS N CA sing N N 318 HIS N H sing N N 319 HIS N H2 sing N N 320 HIS CA C sing N N 321 HIS CA CB sing N N 322 HIS CA HA sing N N 323 HIS C O doub N N 324 HIS C OXT sing N N 325 HIS CB CG sing N N 326 HIS CB HB2 sing N N 327 HIS CB HB3 sing N N 328 HIS CG ND1 sing Y N 329 HIS CG CD2 doub Y N 330 HIS ND1 CE1 doub Y N 331 HIS ND1 HD1 sing N N 332 HIS CD2 NE2 sing Y N 333 HIS CD2 HD2 sing N N 334 HIS CE1 NE2 sing Y N 335 HIS CE1 HE1 sing N N 336 HIS NE2 HE2 sing N N 337 HIS OXT HXT sing N N 338 HOH O H1 sing N N 339 HOH O H2 sing N N 340 ILE N CA sing N N 341 ILE N H sing N N 342 ILE N H2 sing N N 343 ILE CA C sing N N 344 ILE CA CB sing N N 345 ILE CA HA sing N N 346 ILE C O doub N N 347 ILE C OXT sing N N 348 ILE CB CG1 sing N N 349 ILE CB CG2 sing N N 350 ILE CB HB sing N N 351 ILE CG1 CD1 sing N N 352 ILE CG1 HG12 sing N N 353 ILE CG1 HG13 sing N N 354 ILE CG2 HG21 sing N N 355 ILE CG2 HG22 sing N N 356 ILE CG2 HG23 sing N N 357 ILE CD1 HD11 sing N N 358 ILE CD1 HD12 sing N N 359 ILE CD1 HD13 sing N N 360 ILE OXT HXT sing N N 361 IMD N1 C2 sing Y N 362 IMD N1 C5 sing Y N 363 IMD N1 HN1 sing N N 364 IMD C2 N3 doub Y N 365 IMD C2 H2 sing N N 366 IMD N3 C4 sing Y N 367 IMD N3 HN3 sing N N 368 IMD C4 C5 doub Y N 369 IMD C4 H4 sing N N 370 IMD C5 H5 sing N N 371 LEU N CA sing N N 372 LEU N H sing N N 373 LEU N H2 sing N N 374 LEU CA C sing N N 375 LEU CA CB sing N N 376 LEU CA HA sing N N 377 LEU C O doub N N 378 LEU C OXT sing N N 379 LEU CB CG sing N N 380 LEU CB HB2 sing N N 381 LEU CB HB3 sing N N 382 LEU CG CD1 sing N N 383 LEU CG CD2 sing N N 384 LEU CG HG sing N N 385 LEU CD1 HD11 sing N N 386 LEU CD1 HD12 sing N N 387 LEU CD1 HD13 sing N N 388 LEU CD2 HD21 sing N N 389 LEU CD2 HD22 sing N N 390 LEU CD2 HD23 sing N N 391 LEU OXT HXT sing N N 392 LYS N CA sing N N 393 LYS N H sing N N 394 LYS N H2 sing N N 395 LYS CA C sing N N 396 LYS CA CB sing N N 397 LYS CA HA sing N N 398 LYS C O doub N N 399 LYS C OXT sing N N 400 LYS CB CG sing N N 401 LYS CB HB2 sing N N 402 LYS CB HB3 sing N N 403 LYS CG CD sing N N 404 LYS CG HG2 sing N N 405 LYS CG HG3 sing N N 406 LYS CD CE sing N N 407 LYS CD HD2 sing N N 408 LYS CD HD3 sing N N 409 LYS CE NZ sing N N 410 LYS CE HE2 sing N N 411 LYS CE HE3 sing N N 412 LYS NZ HZ1 sing N N 413 LYS NZ HZ2 sing N N 414 LYS NZ HZ3 sing N N 415 LYS OXT HXT sing N N 416 MET N CA sing N N 417 MET N H sing N N 418 MET N H2 sing N N 419 MET CA C sing N N 420 MET CA CB sing N N 421 MET CA HA sing N N 422 MET C O doub N N 423 MET C OXT sing N N 424 MET CB CG sing N N 425 MET CB HB2 sing N N 426 MET CB HB3 sing N N 427 MET CG SD sing N N 428 MET CG HG2 sing N N 429 MET CG HG3 sing N N 430 MET SD CE sing N N 431 MET CE HE1 sing N N 432 MET CE HE2 sing N N 433 MET CE HE3 sing N N 434 MET OXT HXT sing N N 435 PHE N CA sing N N 436 PHE N H sing N N 437 PHE N H2 sing N N 438 PHE CA C sing N N 439 PHE CA CB sing N N 440 PHE CA HA sing N N 441 PHE C O doub N N 442 PHE C OXT sing N N 443 PHE CB CG sing N N 444 PHE CB HB2 sing N N 445 PHE CB HB3 sing N N 446 PHE CG CD1 doub Y N 447 PHE CG CD2 sing Y N 448 PHE CD1 CE1 sing Y N 449 PHE CD1 HD1 sing N N 450 PHE CD2 CE2 doub Y N 451 PHE CD2 HD2 sing N N 452 PHE CE1 CZ doub Y N 453 PHE CE1 HE1 sing N N 454 PHE CE2 CZ sing Y N 455 PHE CE2 HE2 sing N N 456 PHE CZ HZ sing N N 457 PHE OXT HXT sing N N 458 PPV O11 P1 sing N N 459 PPV O11 H11 sing N N 460 PPV P1 O21 sing N N 461 PPV P1 O31 doub N N 462 PPV P1 OPP sing N N 463 PPV O21 H21 sing N N 464 PPV OPP P2 sing N N 465 PPV P2 O12 sing N N 466 PPV P2 O22 doub N N 467 PPV P2 O32 sing N N 468 PPV O12 H12 sing N N 469 PPV O32 H32 sing N N 470 PRO N CA sing N N 471 PRO N CD sing N N 472 PRO N H sing N N 473 PRO CA C sing N N 474 PRO CA CB sing N N 475 PRO CA HA sing N N 476 PRO C O doub N N 477 PRO C OXT sing N N 478 PRO CB CG sing N N 479 PRO CB HB2 sing N N 480 PRO CB HB3 sing N N 481 PRO CG CD sing N N 482 PRO CG HG2 sing N N 483 PRO CG HG3 sing N N 484 PRO CD HD2 sing N N 485 PRO CD HD3 sing N N 486 PRO OXT HXT sing N N 487 SER N CA sing N N 488 SER N H sing N N 489 SER N H2 sing N N 490 SER CA C sing N N 491 SER CA CB sing N N 492 SER CA HA sing N N 493 SER C O doub N N 494 SER C OXT sing N N 495 SER CB OG sing N N 496 SER CB HB2 sing N N 497 SER CB HB3 sing N N 498 SER OG HG sing N N 499 SER OXT HXT sing N N 500 THR N CA sing N N 501 THR N H sing N N 502 THR N H2 sing N N 503 THR CA C sing N N 504 THR CA CB sing N N 505 THR CA HA sing N N 506 THR C O doub N N 507 THR C OXT sing N N 508 THR CB OG1 sing N N 509 THR CB CG2 sing N N 510 THR CB HB sing N N 511 THR OG1 HG1 sing N N 512 THR CG2 HG21 sing N N 513 THR CG2 HG22 sing N N 514 THR CG2 HG23 sing N N 515 THR OXT HXT sing N N 516 TRP N CA sing N N 517 TRP N H sing N N 518 TRP N H2 sing N N 519 TRP CA C sing N N 520 TRP CA CB sing N N 521 TRP CA HA sing N N 522 TRP C O doub N N 523 TRP C OXT sing N N 524 TRP CB CG sing N N 525 TRP CB HB2 sing N N 526 TRP CB HB3 sing N N 527 TRP CG CD1 doub Y N 528 TRP CG CD2 sing Y N 529 TRP CD1 NE1 sing Y N 530 TRP CD1 HD1 sing N N 531 TRP CD2 CE2 doub Y N 532 TRP CD2 CE3 sing Y N 533 TRP NE1 CE2 sing Y N 534 TRP NE1 HE1 sing N N 535 TRP CE2 CZ2 sing Y N 536 TRP CE3 CZ3 doub Y N 537 TRP CE3 HE3 sing N N 538 TRP CZ2 CH2 doub Y N 539 TRP CZ2 HZ2 sing N N 540 TRP CZ3 CH2 sing Y N 541 TRP CZ3 HZ3 sing N N 542 TRP CH2 HH2 sing N N 543 TRP OXT HXT sing N N 544 TYR N CA sing N N 545 TYR N H sing N N 546 TYR N H2 sing N N 547 TYR CA C sing N N 548 TYR CA CB sing N N 549 TYR CA HA sing N N 550 TYR C O doub N N 551 TYR C OXT sing N N 552 TYR CB CG sing N N 553 TYR CB HB2 sing N N 554 TYR CB HB3 sing N N 555 TYR CG CD1 doub Y N 556 TYR CG CD2 sing Y N 557 TYR CD1 CE1 sing Y N 558 TYR CD1 HD1 sing N N 559 TYR CD2 CE2 doub Y N 560 TYR CD2 HD2 sing N N 561 TYR CE1 CZ doub Y N 562 TYR CE1 HE1 sing N N 563 TYR CE2 CZ sing Y N 564 TYR CE2 HE2 sing N N 565 TYR CZ OH sing N N 566 TYR OH HH sing N N 567 TYR OXT HXT sing N N 568 VAL N CA sing N N 569 VAL N H sing N N 570 VAL N H2 sing N N 571 VAL CA C sing N N 572 VAL CA CB sing N N 573 VAL CA HA sing N N 574 VAL C O doub N N 575 VAL C OXT sing N N 576 VAL CB CG1 sing N N 577 VAL CB CG2 sing N N 578 VAL CB HB sing N N 579 VAL CG1 HG11 sing N N 580 VAL CG1 HG12 sing N N 581 VAL CG1 HG13 sing N N 582 VAL CG2 HG21 sing N N 583 VAL CG2 HG22 sing N N 584 VAL CG2 HG23 sing N N 585 VAL OXT HXT sing N N 586 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5VS0 'double helix' 5VS0 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DG 1 1_555 D DC 5 1_555 -0.283 -0.188 -0.210 -10.528 4.546 -1.825 1 D_DG1:DC5_T D 1 ? T 5 ? 19 1 1 B DT 2 1_555 D DA 4 1_555 -0.083 -0.039 0.095 -9.127 -6.976 0.753 2 D_DT2:DA4_T D 2 ? T 4 ? 20 1 1 B DC 3 1_555 D DG 3 1_555 0.246 -0.127 0.052 -0.424 -9.950 -1.708 3 D_DC3:DG3_T D 3 ? T 3 ? 19 1 1 B DG 4 1_555 D DC 2 1_555 0.186 -0.181 0.055 -1.356 -5.389 -6.791 4 D_DG4:DC2_T D 4 ? T 2 ? 19 1 1 B DG 5 1_555 D DC 1 1_555 -0.656 -0.211 -0.509 -1.377 -13.937 -5.329 5 D_DG5:DC1_T D 5 ? T 1 ? 19 1 1 C DC 1 1_555 D DG 16 1_555 0.317 -0.082 0.917 -23.022 -12.097 3.618 6 P_DC1:DG16_T P 1 ? T 16 ? 19 1 1 C DT 2 1_555 D DA 15 1_555 -0.150 -0.228 0.236 -7.337 -7.791 0.527 7 P_DT2:DA15_T P 2 ? T 15 ? 20 1 1 C DG 3 1_555 D DC 14 1_555 -0.677 -0.263 -0.085 -2.358 -9.648 0.545 8 P_DG3:DC14_T P 3 ? T 14 ? 19 1 1 C DA 4 1_555 D DT 13 1_555 0.111 -0.069 0.078 -0.415 -10.498 2.182 9 P_DA4:DT13_T P 4 ? T 13 ? 20 1 1 C DT 5 1_555 D DA 12 1_555 -0.119 -0.044 -0.023 4.001 -7.078 2.014 10 P_DT5:DA12_T P 5 ? T 12 ? 20 1 1 C DG 6 1_555 D DC 11 1_555 -0.221 0.031 0.133 2.436 -10.125 3.416 11 P_DG6:DC11_T P 6 ? T 11 ? 19 1 1 C DC 7 1_555 D DG 10 1_555 0.315 -0.103 0.483 -8.519 -9.536 -1.055 12 P_DC7:DG10_T P 7 ? T 10 ? 19 1 1 C DG 8 1_555 D DC 9 1_555 -0.020 -0.128 0.079 -0.225 -6.651 -3.578 13 P_DG8:DC9_T P 8 ? T 9 ? 19 1 1 C DC 9 1_555 D DG 8 1_555 0.127 -0.082 -0.102 -12.336 -6.487 2.562 14 P_DC9:DG8_T P 9 ? T 8 ? 19 1 1 C DC 10 1_555 D 8OG 7 1_555 0.210 -0.193 0.421 -7.695 2.095 -0.327 15 P_DC10:8OG7_T P 10 ? T 7 ? 19 1 1 C DT 11 1_555 D DA 6 1_555 0.039 -0.129 -0.067 7.596 10.449 -2.466 16 P_DT11:DA6_T P 11 ? T 6 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DG 1 1_555 D DC 5 1_555 B DT 2 1_555 D DA 4 1_555 -0.594 -0.492 3.348 -0.882 3.406 28.543 -1.768 0.995 3.285 6.874 1.780 28.755 1 DD_DG1DT2:DA4DC5_TT D 1 ? T 5 ? D 2 ? T 4 ? 1 B DT 2 1_555 D DA 4 1_555 B DC 3 1_555 D DG 3 1_555 -0.087 0.151 3.027 1.241 4.208 33.587 -0.369 0.334 3.018 7.244 -2.136 33.864 2 DD_DT2DC3:DG3DA4_TT D 2 ? T 4 ? D 3 ? T 3 ? 1 B DC 3 1_555 D DG 3 1_555 B DG 4 1_555 D DC 2 1_555 -0.121 2.096 3.428 1.221 -2.592 43.431 3.085 0.284 3.300 -3.498 -1.648 43.521 3 DD_DC3DG4:DC2DG3_TT D 3 ? T 3 ? D 4 ? T 2 ? 1 B DG 4 1_555 D DC 2 1_555 B DG 5 1_555 D DC 1 1_555 0.475 0.840 3.437 7.782 10.912 25.767 -1.032 0.985 3.498 22.624 -16.133 28.992 4 DD_DG4DG5:DC1DC2_TT D 4 ? T 2 ? D 5 ? T 1 ? 1 C DC 1 1_555 D DG 16 1_555 C DT 2 1_555 D DA 15 1_555 -0.749 -0.563 2.851 7.063 8.004 28.629 -2.382 2.581 2.364 15.521 -13.696 30.515 5 PP_DC1DT2:DA15DG16_TT P 1 ? T 16 ? P 2 ? T 15 ? 1 C DT 2 1_555 D DA 15 1_555 C DG 3 1_555 D DC 14 1_555 0.628 0.129 3.170 2.683 9.151 31.881 -1.280 -0.656 3.128 16.212 -4.753 33.241 6 PP_DT2DG3:DC14DA15_TT P 2 ? T 15 ? P 3 ? T 14 ? 1 C DG 3 1_555 D DC 14 1_555 C DA 4 1_555 D DT 13 1_555 -0.122 -0.247 3.098 -2.685 5.415 37.637 -1.025 -0.133 3.036 8.328 4.129 38.102 7 PP_DG3DA4:DT13DC14_TT P 3 ? T 14 ? P 4 ? T 13 ? 1 C DA 4 1_555 D DT 13 1_555 C DT 5 1_555 D DA 12 1_555 -0.069 -0.614 3.167 0.716 3.068 28.902 -1.869 0.288 3.084 6.123 -1.430 29.070 8 PP_DA4DT5:DA12DT13_TT P 4 ? T 13 ? P 5 ? T 12 ? 1 C DT 5 1_555 D DA 12 1_555 C DG 6 1_555 D DC 11 1_555 0.330 0.053 3.309 0.275 7.454 32.976 -1.132 -0.522 3.246 12.926 -0.477 33.786 9 PP_DT5DG6:DC11DA12_TT P 5 ? T 12 ? P 6 ? T 11 ? 1 C DG 6 1_555 D DC 11 1_555 C DC 7 1_555 D DG 10 1_555 -0.667 -0.215 3.579 -3.303 0.232 39.280 -0.350 0.559 3.620 0.344 4.902 39.414 10 PP_DG6DC7:DG10DC11_TT P 6 ? T 11 ? P 7 ? T 10 ? 1 C DC 7 1_555 D DG 10 1_555 C DG 8 1_555 D DC 9 1_555 0.175 0.028 3.120 3.890 5.635 28.886 -1.082 0.444 3.067 11.101 -7.663 29.670 11 PP_DC7DG8:DC9DG10_TT P 7 ? T 10 ? P 8 ? T 9 ? 1 C DG 8 1_555 D DC 9 1_555 C DC 9 1_555 D DG 8 1_555 1.340 -0.113 3.519 2.817 1.436 42.661 -0.311 -1.531 3.591 1.970 -3.866 42.773 12 PP_DG8DC9:DG8DC9_TT P 8 ? T 9 ? P 9 ? T 8 ? 1 C DC 9 1_555 D DG 8 1_555 C DC 10 1_555 D 8OG 7 1_555 -0.322 -0.600 3.407 -2.200 9.933 28.092 -3.267 0.160 3.039 19.666 4.355 29.843 13 PP_DC9DC10:8OG7DG8_TT P 9 ? T 8 ? P 10 ? T 7 ? 1 C DC 10 1_555 D 8OG 7 1_555 C DT 11 1_555 D DA 6 1_555 -0.254 -0.509 3.016 6.160 10.680 22.120 -3.897 2.156 2.370 25.451 -14.680 25.287 14 PP_DC10DT11:DA68OG7_TT P 10 ? T 7 ? P 11 ? T 6 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES024585 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' ES026821 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'CHLORIDE ION' CL 7 IMIDAZOLE IMD 8 PYROPHOSPHATE PPV 9 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4RPX _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #