HEADER TRANSFERASE 17-MAY-17 5VTP TITLE X-RAY DIFFRACTION DATA OF DNA POLYMERASE ETA (RAD30) OF SACCHAROMYCES TITLE 2 CEREVISIAE WITH A SINGLE MAGNESIUM BOUND IN ABSENCE OF DNA AND TITLE 3 INCOMING DNTP COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE ETA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN FRAGMENT (UNP RESIDUES 1-528); COMPND 5 SYNONYM: RADIATION-SENSITIVE PROTEIN 30; COMPND 6 EC: 2.7.7.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292; SOURCE 6 STRAIN: ATCC 204508 / S288C; SOURCE 7 GENE: RAD30, DBH1, YDR419W; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS RAD30, DNA POLYMERASE ETA, DNA TRANSFERASE, CATALYTIC DOMAIN, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.T.POWERS,M.T.WASHINGTON REVDAT 5 04-OCT-23 5VTP 1 REMARK REVDAT 4 01-JAN-20 5VTP 1 REMARK REVDAT 3 14-MAR-18 5VTP 1 JRNL REVDAT 2 14-FEB-18 5VTP 1 JRNL REVDAT 1 24-JAN-18 5VTP 0 JRNL AUTH K.T.POWERS,A.H.ELCOCK,M.T.WASHINGTON JRNL TITL THE C-TERMINAL REGION OF TRANSLESION SYNTHESIS DNA JRNL TITL 2 POLYMERASE ETA IS PARTIALLY UNSTRUCTURED AND HAS HIGH JRNL TITL 3 CONFORMATIONAL FLEXIBILITY. JRNL REF NUCLEIC ACIDS RES. V. 46 2107 2018 JRNL REFN ESSN 1362-4962 JRNL PMID 29385534 JRNL DOI 10.1093/NAR/GKY031 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 23171 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2264 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.3747 - 7.0462 1.00 2655 104 0.2182 0.2405 REMARK 3 2 7.0462 - 5.5966 1.00 2654 114 0.2237 0.2569 REMARK 3 3 5.5966 - 4.8902 1.00 2620 130 0.1835 0.2270 REMARK 3 4 4.8902 - 4.4436 1.00 2617 142 0.1655 0.1889 REMARK 3 5 4.4436 - 4.1254 1.00 2582 182 0.1787 0.2212 REMARK 3 6 4.1254 - 3.8823 1.00 2601 168 0.1948 0.2030 REMARK 3 7 3.8823 - 3.6880 1.00 2613 162 0.2096 0.2537 REMARK 3 8 3.6880 - 3.5275 1.00 2616 128 0.2238 0.2337 REMARK 3 9 3.5275 - 3.3918 1.00 2626 156 0.2359 0.2629 REMARK 3 10 3.3918 - 3.2748 1.00 2543 166 0.2661 0.3156 REMARK 3 11 3.2748 - 3.1724 1.00 2613 150 0.2728 0.3030 REMARK 3 12 3.1724 - 3.0817 1.00 2672 128 0.2952 0.3519 REMARK 3 13 3.0817 - 3.0006 1.00 2625 126 0.2854 0.3080 REMARK 3 14 3.0006 - 2.9274 1.00 2629 104 0.3011 0.2856 REMARK 3 15 2.9274 - 2.8609 1.00 2612 172 0.3180 0.3406 REMARK 3 16 2.8609 - 2.8000 1.00 2635 132 0.3583 0.4152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.420 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 69.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 79.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4040 REMARK 3 ANGLE : 0.619 5470 REMARK 3 CHIRALITY : 0.041 622 REMARK 3 PLANARITY : 0.004 698 REMARK 3 DIHEDRAL : 13.139 2434 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VTP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000227943. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK SI(111) SAGITALLY REMARK 200 FOCUSED MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : NOIR-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS NOVEMBER 1, 2016 REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23171 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 56.587 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 10.60 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 18.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : 1.02400 REMARK 200 R SYM FOR SHELL (I) : 1.02400 REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1JIH REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% V/V GLYCERIN (ADDITIVE), 14.4% W/V REMARK 280 PEG 8000 (PRECIPITANT), 0.08 M NACAC 6.5 PH (BUFFER), 0.16 M REMARK 280 CA(OAC)2 (SALT), PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.30267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.60533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.60533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.30267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 46080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 62.60533 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 ASP A 510 REMARK 465 LEU A 511 REMARK 465 GLN A 512 REMARK 465 LYS A 513 REMARK 465 THR A 514 REMARK 465 VAL A 515 REMARK 465 VAL A 516 REMARK 465 ASP A 517 REMARK 465 MET A 518 REMARK 465 PHE A 519 REMARK 465 GLY A 520 REMARK 465 ASN A 521 REMARK 465 GLN A 522 REMARK 465 VAL A 523 REMARK 465 HIS A 524 REMARK 465 THR A 525 REMARK 465 PHE A 526 REMARK 465 LYS A 527 REMARK 465 SER A 528 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 17 CG CD CE NZ REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 MET A 74 CG SD CE REMARK 470 LYS A 82 CG CD CE NZ REMARK 470 LYS A 117 CG CD CE NZ REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 ASP A 180 CG OD1 OD2 REMARK 470 LEU A 181 CG CD1 CD2 REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 216 CG CD CE NZ REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 LYS A 351 CG CD CE NZ REMARK 470 ASP A 354 CG OD1 OD2 REMARK 470 ASP A 356 CG OD1 OD2 REMARK 470 ARG A 357 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 404 CG CD CE NZ REMARK 470 LYS A 464 CG CD CE NZ REMARK 470 ILE A 466 CG1 CG2 CD1 REMARK 470 ASN A 467 CG OD1 ND2 REMARK 470 GLN A 469 CG CD OE1 NE2 REMARK 470 LYS A 475 CG CD CE NZ REMARK 470 LYS A 479 CG CD CE NZ REMARK 470 LYS A 487 CG CD CE NZ REMARK 470 LYS A 489 CG CD CE NZ REMARK 470 ASN A 490 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLN A 55 NE2 HIS A 91 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 55 -75.05 -107.97 REMARK 500 TRP A 56 -81.47 -119.45 REMARK 500 HIS A 105 63.61 -112.51 REMARK 500 LYS A 117 40.63 -92.72 REMARK 500 ASN A 223 67.78 -151.73 REMARK 500 SER A 265 -160.45 -163.20 REMARK 500 SER A 405 2.25 -62.58 REMARK 500 CYS A 406 82.03 -152.98 REMARK 500 PHE A 468 54.67 -96.37 REMARK 500 GLN A 469 -162.84 -74.12 REMARK 500 SER A 470 4.11 54.27 REMARK 500 HIS A 471 -55.95 -132.11 REMARK 500 LEU A 473 -8.83 86.55 REMARK 500 LYS A 489 -129.04 53.04 REMARK 500 TYR A 493 -81.61 -131.66 REMARK 500 ASN A 505 77.35 51.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 30 OD2 REMARK 620 2 GLU A 156 OE1 96.9 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 98 O REMARK 620 2 GLU A 417 OE2 89.5 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 DBREF 5VTP A 1 528 UNP Q04049 POLH_YEAST 1 528 SEQADV 5VTP MET A -6 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A -5 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A -4 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A -3 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A -2 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A -1 UNP Q04049 EXPRESSION TAG SEQADV 5VTP HIS A 0 UNP Q04049 EXPRESSION TAG SEQRES 1 A 535 MET HIS HIS HIS HIS HIS HIS MET SER LYS PHE THR TRP SEQRES 2 A 535 LYS GLU LEU ILE GLN LEU GLY SER PRO SER LYS ALA TYR SEQRES 3 A 535 GLU SER SER LEU ALA CYS ILE ALA HIS ILE ASP MET ASN SEQRES 4 A 535 ALA PHE PHE ALA GLN VAL GLU GLN MET ARG CYS GLY LEU SEQRES 5 A 535 SER LYS GLU ASP PRO VAL VAL CYS VAL GLN TRP ASN SER SEQRES 6 A 535 ILE ILE ALA VAL SER TYR ALA ALA ARG LYS TYR GLY ILE SEQRES 7 A 535 SER ARG MET ASP THR ILE GLN GLU ALA LEU LYS LYS CYS SEQRES 8 A 535 SER ASN LEU ILE PRO ILE HIS THR ALA VAL PHE LYS LYS SEQRES 9 A 535 GLY GLU ASP PHE TRP GLN TYR HIS ASP GLY CYS GLY SER SEQRES 10 A 535 TRP VAL GLN ASP PRO ALA LYS GLN ILE SER VAL GLU ASP SEQRES 11 A 535 HIS LYS VAL SER LEU GLU PRO TYR ARG ARG GLU SER ARG SEQRES 12 A 535 LYS ALA LEU LYS ILE PHE LYS SER ALA CYS ASP LEU VAL SEQRES 13 A 535 GLU ARG ALA SER ILE ASP GLU VAL PHE LEU ASP LEU GLY SEQRES 14 A 535 ARG ILE CYS PHE ASN MET LEU MET PHE ASP ASN GLU TYR SEQRES 15 A 535 GLU LEU THR GLY ASP LEU LYS LEU LYS ASP ALA LEU SER SEQRES 16 A 535 ASN ILE ARG GLU ALA PHE ILE GLY GLY ASN TYR ASP ILE SEQRES 17 A 535 ASN SER HIS LEU PRO LEU ILE PRO GLU LYS ILE LYS SER SEQRES 18 A 535 LEU LYS PHE GLU GLY ASP VAL PHE ASN PRO GLU GLY ARG SEQRES 19 A 535 ASP LEU ILE THR ASP TRP ASP ASP VAL ILE LEU ALA LEU SEQRES 20 A 535 GLY SER GLN VAL CYS LYS GLY ILE ARG ASP SER ILE LYS SEQRES 21 A 535 ASP ILE LEU GLY TYR THR THR SER CYS GLY LEU SER SER SEQRES 22 A 535 THR LYS ASN VAL CYS LYS LEU ALA SER ASN TYR LYS LYS SEQRES 23 A 535 PRO ASP ALA GLN THR ILE VAL LYS ASN ASP CYS LEU LEU SEQRES 24 A 535 ASP PHE LEU ASP CYS GLY LYS PHE GLU ILE THR SER PHE SEQRES 25 A 535 TRP THR LEU GLY GLY VAL LEU GLY LYS GLU LEU ILE ASP SEQRES 26 A 535 VAL LEU ASP LEU PRO HIS GLU ASN SER ILE LYS HIS ILE SEQRES 27 A 535 ARG GLU THR TRP PRO ASP ASN ALA GLY GLN LEU LYS GLU SEQRES 28 A 535 PHE LEU ASP ALA LYS VAL LYS GLN SER ASP TYR ASP ARG SEQRES 29 A 535 SER THR SER ASN ILE ASP PRO LEU LYS THR ALA ASP LEU SEQRES 30 A 535 ALA GLU LYS LEU PHE LYS LEU SER ARG GLY ARG TYR GLY SEQRES 31 A 535 LEU PRO LEU SER SER ARG PRO VAL VAL LYS SER MET MET SEQRES 32 A 535 SER ASN LYS ASN LEU ARG GLY LYS SER CYS ASN SER ILE SEQRES 33 A 535 VAL ASP CYS ILE SER TRP LEU GLU VAL PHE CYS ALA GLU SEQRES 34 A 535 LEU THR SER ARG ILE GLN ASP LEU GLU GLN GLU TYR ASN SEQRES 35 A 535 LYS ILE VAL ILE PRO ARG THR VAL SER ILE SER LEU LYS SEQRES 36 A 535 THR LYS SER TYR GLU VAL TYR ARG LYS SER GLY PRO VAL SEQRES 37 A 535 ALA TYR LYS GLY ILE ASN PHE GLN SER HIS GLU LEU LEU SEQRES 38 A 535 LYS VAL GLY ILE LYS PHE VAL THR ASP LEU ASP ILE LYS SEQRES 39 A 535 GLY LYS ASN LYS SER TYR TYR PRO LEU THR LYS LEU SER SEQRES 40 A 535 MET THR ILE THR ASN PHE ASP ILE ILE ASP LEU GLN LYS SEQRES 41 A 535 THR VAL VAL ASP MET PHE GLY ASN GLN VAL HIS THR PHE SEQRES 42 A 535 LYS SER HET MG A 601 1 HET MG A 602 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 HOH *23(H2 O) HELIX 1 AA1 THR A 5 GLN A 11 1 7 HELIX 2 AA2 LEU A 12 SER A 14 5 3 HELIX 3 AA3 LYS A 17 SER A 21 5 5 HELIX 4 AA4 ALA A 33 CYS A 43 1 11 HELIX 5 AA5 SER A 63 LYS A 68 1 6 HELIX 6 AA6 THR A 76 CYS A 84 1 9 HELIX 7 AA7 LEU A 128 CYS A 146 1 19 HELIX 8 AA8 LEU A 161 ASP A 172 1 12 HELIX 9 AA9 LYS A 182 LEU A 187 1 6 HELIX 10 AB1 LEU A 187 GLY A 197 1 11 HELIX 11 AB2 PRO A 209 LEU A 215 5 7 HELIX 12 AB3 ASP A 232 LEU A 256 1 25 HELIX 13 AB4 THR A 267 ASN A 276 1 10 HELIX 14 AB5 LYS A 287 ASP A 289 5 3 HELIX 15 AB6 CYS A 290 ASP A 296 1 7 HELIX 16 AB7 GLU A 301 PHE A 305 5 5 HELIX 17 AB8 GLY A 310 LEU A 320 1 11 HELIX 18 AB9 ASN A 326 TRP A 335 1 10 HELIX 19 AC1 ASN A 338 GLN A 352 1 15 HELIX 20 AC2 LYS A 366 SER A 378 1 13 HELIX 21 AC3 SER A 408 ASN A 435 1 28 HELIX 22 AC4 LEU A 474 LYS A 489 1 16 SHEET 1 AA1 6 VAL A 149 SER A 153 0 SHEET 2 AA1 6 GLU A 156 ASP A 160 -1 O PHE A 158 N GLU A 150 SHEET 3 AA1 6 ILE A 26 ASP A 30 -1 N ALA A 27 O LEU A 159 SHEET 4 AA1 6 SER A 261 SER A 265 -1 O SER A 265 N ILE A 26 SHEET 5 AA1 6 GLN A 283 ILE A 285 1 O THR A 284 N CYS A 262 SHEET 6 AA1 6 ASP A 220 VAL A 221 1 N ASP A 220 O GLN A 283 SHEET 1 AA2 3 ILE A 59 VAL A 62 0 SHEET 2 AA2 3 VAL A 51 VAL A 54 -1 N CYS A 53 O ILE A 60 SHEET 3 AA2 3 ILE A 88 HIS A 91 1 O ILE A 90 N VAL A 52 SHEET 1 AA3 3 TRP A 102 GLN A 103 0 SHEET 2 AA3 3 VAL A 94 LYS A 96 -1 N VAL A 94 O GLN A 103 SHEET 3 AA3 3 HIS A 124 VAL A 126 -1 O LYS A 125 N PHE A 95 SHEET 1 AA4 4 SER A 394 ASN A 400 0 SHEET 2 AA4 4 LYS A 498 ILE A 509 -1 O MET A 501 N SER A 397 SHEET 3 AA4 4 ILE A 437 LYS A 448 -1 N SER A 444 O THR A 502 SHEET 4 AA4 4 VAL A 454 PRO A 460 -1 O GLY A 459 N VAL A 443 LINK OD2 ASP A 30 MG MG A 601 1555 1555 2.16 LINK O GLY A 98 MG MG A 602 1555 1555 2.15 LINK OE1 GLU A 156 MG MG A 601 1555 1555 2.16 LINK OE2 GLU A 417 MG MG A 602 1555 1555 2.08 CISPEP 1 LYS A 279 PRO A 280 0 1.59 CISPEP 2 TYR A 494 PRO A 495 0 0.98 SITE 1 AC1 2 ASP A 30 GLU A 156 SITE 1 AC2 2 GLY A 98 GLU A 417 CRYST1 130.681 130.681 93.908 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007652 0.004418 0.000000 0.00000 SCALE2 0.000000 0.008836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010649 0.00000