data_5VU8 # _entry.id 5VU8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.288 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5VU8 WWPDB D_1000227877 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5VU5 unspecified PDB . 5VU6 unspecified PDB . 5VU7 unspecified PDB . 5VU9 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VU8 _pdbx_database_status.recvd_initial_deposition_date 2017-05-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chim, N.' 1 ? 'Chaput, J.C.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 8 _citation.language ? _citation.page_first 1810 _citation.page_last 1810 _citation.title 'Structural basis for TNA synthesis by an engineered TNA polymerase.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-017-02014-0 _citation.pdbx_database_id_PubMed 29180809 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Chim, N.' 1 primary 'Shi, C.' 2 primary 'Sau, S.P.' 3 primary 'Nikoomanzar, A.' 4 primary 'Chaput, J.C.' 5 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5VU8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.288 _cell.length_a_esd ? _cell.length_b 107.360 _cell.length_b_esd ? _cell.length_c 147.732 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA polymerase' 90130.617 1 2.7.7.7 ? ? ? 2 polymer syn 'DNA template' 4898.191 1 ? ? ? ? 3 polymer syn 'DNA/TNA hybrid primer' 3642.380 1 ? ? ? ? 4 non-polymer syn '[(3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate' 477.155 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 3 ? ? ? ? 6 water nat water 18.015 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Kod-RI # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHGTVVTVKRVEKVQKKFLGRPV EVWKLYFTHPQDVPAIRDKIREHPAVIDIYEYDIPFAKRYLIDKGLVPMEGDEELKMLAFAIATLYHEGEEFAEGPILMI SYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPK IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETGENLERVARYSMEDAKVTY ELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENI VYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLD YRQRRIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKA MEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVIDEEGKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAV RIVKEVTEKLSKYEVPPEKLVIHIQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVISYIVLKGSGRIGDRAIPFDEF DPTKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLSAWLKPKGT ; ;MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHGTVVTVKRVEKVQKKFLGRPV EVWKLYFTHPQDVPAIRDKIREHPAVIDIYEYDIPFAKRYLIDKGLVPMEGDEELKMLAFAIATLYHEGEEFAEGPILMI SYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPK IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETGENLERVARYSMEDAKVTY ELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENI VYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLD YRQRRIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKA MEFLKYINAKLPGALELEYEGFYKRGFFVTKKKYAVIDEEGKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAV RIVKEVTEKLSKYEVPPEKLVIHIQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVISYIVLKGSGRIGDRAIPFDEF DPTKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLSAWLKPKGT ; A ? 2 polydeoxyribonucleotide no no '(DA)(DA)(DA)(DT)(DT)(DC)(DG)(DC)(DA)(DG)(DT)(DT)(DC)(DG)(DC)(DG)' AAATTCGCAGTTCGCG T ? 3 polydeoxyribonucleotide no yes '(DC)(DG)(DC)(DG)(DA)(DA)(DC)(DT)(DG)(DC)(DG)(9O4)' CGCGAACTGCGX P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 LEU n 1 4 ASP n 1 5 THR n 1 6 ASP n 1 7 TYR n 1 8 ILE n 1 9 THR n 1 10 GLU n 1 11 ASP n 1 12 GLY n 1 13 LYS n 1 14 PRO n 1 15 VAL n 1 16 ILE n 1 17 ARG n 1 18 ILE n 1 19 PHE n 1 20 LYS n 1 21 LYS n 1 22 GLU n 1 23 ASN n 1 24 GLY n 1 25 GLU n 1 26 PHE n 1 27 LYS n 1 28 ILE n 1 29 GLU n 1 30 TYR n 1 31 ASP n 1 32 ARG n 1 33 THR n 1 34 PHE n 1 35 GLU n 1 36 PRO n 1 37 TYR n 1 38 PHE n 1 39 TYR n 1 40 ALA n 1 41 LEU n 1 42 LEU n 1 43 LYS n 1 44 ASP n 1 45 ASP n 1 46 SER n 1 47 ALA n 1 48 ILE n 1 49 GLU n 1 50 GLU n 1 51 VAL n 1 52 LYS n 1 53 LYS n 1 54 ILE n 1 55 THR n 1 56 ALA n 1 57 GLU n 1 58 ARG n 1 59 HIS n 1 60 GLY n 1 61 THR n 1 62 VAL n 1 63 VAL n 1 64 THR n 1 65 VAL n 1 66 LYS n 1 67 ARG n 1 68 VAL n 1 69 GLU n 1 70 LYS n 1 71 VAL n 1 72 GLN n 1 73 LYS n 1 74 LYS n 1 75 PHE n 1 76 LEU n 1 77 GLY n 1 78 ARG n 1 79 PRO n 1 80 VAL n 1 81 GLU n 1 82 VAL n 1 83 TRP n 1 84 LYS n 1 85 LEU n 1 86 TYR n 1 87 PHE n 1 88 THR n 1 89 HIS n 1 90 PRO n 1 91 GLN n 1 92 ASP n 1 93 VAL n 1 94 PRO n 1 95 ALA n 1 96 ILE n 1 97 ARG n 1 98 ASP n 1 99 LYS n 1 100 ILE n 1 101 ARG n 1 102 GLU n 1 103 HIS n 1 104 PRO n 1 105 ALA n 1 106 VAL n 1 107 ILE n 1 108 ASP n 1 109 ILE n 1 110 TYR n 1 111 GLU n 1 112 TYR n 1 113 ASP n 1 114 ILE n 1 115 PRO n 1 116 PHE n 1 117 ALA n 1 118 LYS n 1 119 ARG n 1 120 TYR n 1 121 LEU n 1 122 ILE n 1 123 ASP n 1 124 LYS n 1 125 GLY n 1 126 LEU n 1 127 VAL n 1 128 PRO n 1 129 MET n 1 130 GLU n 1 131 GLY n 1 132 ASP n 1 133 GLU n 1 134 GLU n 1 135 LEU n 1 136 LYS n 1 137 MET n 1 138 LEU n 1 139 ALA n 1 140 PHE n 1 141 ALA n 1 142 ILE n 1 143 ALA n 1 144 THR n 1 145 LEU n 1 146 TYR n 1 147 HIS n 1 148 GLU n 1 149 GLY n 1 150 GLU n 1 151 GLU n 1 152 PHE n 1 153 ALA n 1 154 GLU n 1 155 GLY n 1 156 PRO n 1 157 ILE n 1 158 LEU n 1 159 MET n 1 160 ILE n 1 161 SER n 1 162 TYR n 1 163 ALA n 1 164 ASP n 1 165 GLU n 1 166 GLU n 1 167 GLY n 1 168 ALA n 1 169 ARG n 1 170 VAL n 1 171 ILE n 1 172 THR n 1 173 TRP n 1 174 LYS n 1 175 ASN n 1 176 VAL n 1 177 ASP n 1 178 LEU n 1 179 PRO n 1 180 TYR n 1 181 VAL n 1 182 ASP n 1 183 VAL n 1 184 VAL n 1 185 SER n 1 186 THR n 1 187 GLU n 1 188 ARG n 1 189 GLU n 1 190 MET n 1 191 ILE n 1 192 LYS n 1 193 ARG n 1 194 PHE n 1 195 LEU n 1 196 ARG n 1 197 VAL n 1 198 VAL n 1 199 LYS n 1 200 GLU n 1 201 LYS n 1 202 ASP n 1 203 PRO n 1 204 ASP n 1 205 VAL n 1 206 LEU n 1 207 ILE n 1 208 THR n 1 209 TYR n 1 210 ASN n 1 211 GLY n 1 212 ASP n 1 213 ASN n 1 214 PHE n 1 215 ASP n 1 216 PHE n 1 217 ALA n 1 218 TYR n 1 219 LEU n 1 220 LYS n 1 221 LYS n 1 222 ARG n 1 223 CYS n 1 224 GLU n 1 225 LYS n 1 226 LEU n 1 227 GLY n 1 228 ILE n 1 229 ASN n 1 230 PHE n 1 231 ALA n 1 232 LEU n 1 233 GLY n 1 234 ARG n 1 235 ASP n 1 236 GLY n 1 237 SER n 1 238 GLU n 1 239 PRO n 1 240 LYS n 1 241 ILE n 1 242 GLN n 1 243 ARG n 1 244 MET n 1 245 GLY n 1 246 ASP n 1 247 ARG n 1 248 PHE n 1 249 ALA n 1 250 VAL n 1 251 GLU n 1 252 VAL n 1 253 LYS n 1 254 GLY n 1 255 ARG n 1 256 ILE n 1 257 HIS n 1 258 PHE n 1 259 ASP n 1 260 LEU n 1 261 TYR n 1 262 PRO n 1 263 VAL n 1 264 ILE n 1 265 ARG n 1 266 ARG n 1 267 THR n 1 268 ILE n 1 269 ASN n 1 270 LEU n 1 271 PRO n 1 272 THR n 1 273 TYR n 1 274 THR n 1 275 LEU n 1 276 GLU n 1 277 ALA n 1 278 VAL n 1 279 TYR n 1 280 GLU n 1 281 ALA n 1 282 VAL n 1 283 PHE n 1 284 GLY n 1 285 GLN n 1 286 PRO n 1 287 LYS n 1 288 GLU n 1 289 LYS n 1 290 VAL n 1 291 TYR n 1 292 ALA n 1 293 GLU n 1 294 GLU n 1 295 ILE n 1 296 THR n 1 297 THR n 1 298 ALA n 1 299 TRP n 1 300 GLU n 1 301 THR n 1 302 GLY n 1 303 GLU n 1 304 ASN n 1 305 LEU n 1 306 GLU n 1 307 ARG n 1 308 VAL n 1 309 ALA n 1 310 ARG n 1 311 TYR n 1 312 SER n 1 313 MET n 1 314 GLU n 1 315 ASP n 1 316 ALA n 1 317 LYS n 1 318 VAL n 1 319 THR n 1 320 TYR n 1 321 GLU n 1 322 LEU n 1 323 GLY n 1 324 LYS n 1 325 GLU n 1 326 PHE n 1 327 LEU n 1 328 PRO n 1 329 MET n 1 330 GLU n 1 331 ALA n 1 332 GLN n 1 333 LEU n 1 334 SER n 1 335 ARG n 1 336 LEU n 1 337 ILE n 1 338 GLY n 1 339 GLN n 1 340 SER n 1 341 LEU n 1 342 TRP n 1 343 ASP n 1 344 VAL n 1 345 SER n 1 346 ARG n 1 347 SER n 1 348 SER n 1 349 THR n 1 350 GLY n 1 351 ASN n 1 352 LEU n 1 353 VAL n 1 354 GLU n 1 355 TRP n 1 356 PHE n 1 357 LEU n 1 358 LEU n 1 359 ARG n 1 360 LYS n 1 361 ALA n 1 362 TYR n 1 363 GLU n 1 364 ARG n 1 365 ASN n 1 366 GLU n 1 367 LEU n 1 368 ALA n 1 369 PRO n 1 370 ASN n 1 371 LYS n 1 372 PRO n 1 373 ASP n 1 374 GLU n 1 375 LYS n 1 376 GLU n 1 377 LEU n 1 378 ALA n 1 379 ARG n 1 380 ARG n 1 381 ARG n 1 382 GLN n 1 383 SER n 1 384 TYR n 1 385 GLU n 1 386 GLY n 1 387 GLY n 1 388 TYR n 1 389 VAL n 1 390 LYS n 1 391 GLU n 1 392 PRO n 1 393 GLU n 1 394 ARG n 1 395 GLY n 1 396 LEU n 1 397 TRP n 1 398 GLU n 1 399 ASN n 1 400 ILE n 1 401 VAL n 1 402 TYR n 1 403 LEU n 1 404 ASP n 1 405 PHE n 1 406 ARG n 1 407 SER n 1 408 LEU n 1 409 TYR n 1 410 PRO n 1 411 SER n 1 412 ILE n 1 413 ILE n 1 414 ILE n 1 415 THR n 1 416 HIS n 1 417 ASN n 1 418 VAL n 1 419 SER n 1 420 PRO n 1 421 ASP n 1 422 THR n 1 423 LEU n 1 424 ASN n 1 425 ARG n 1 426 GLU n 1 427 GLY n 1 428 CYS n 1 429 LYS n 1 430 GLU n 1 431 TYR n 1 432 ASP n 1 433 VAL n 1 434 ALA n 1 435 PRO n 1 436 GLN n 1 437 VAL n 1 438 GLY n 1 439 HIS n 1 440 ARG n 1 441 PHE n 1 442 CYS n 1 443 LYS n 1 444 ASP n 1 445 PHE n 1 446 PRO n 1 447 GLY n 1 448 PHE n 1 449 ILE n 1 450 PRO n 1 451 SER n 1 452 LEU n 1 453 LEU n 1 454 GLY n 1 455 ASP n 1 456 LEU n 1 457 LEU n 1 458 GLU n 1 459 GLU n 1 460 ARG n 1 461 GLN n 1 462 LYS n 1 463 ILE n 1 464 LYS n 1 465 LYS n 1 466 LYS n 1 467 MET n 1 468 LYS n 1 469 ALA n 1 470 THR n 1 471 ILE n 1 472 ASP n 1 473 PRO n 1 474 ILE n 1 475 GLU n 1 476 ARG n 1 477 LYS n 1 478 LEU n 1 479 LEU n 1 480 ASP n 1 481 TYR n 1 482 ARG n 1 483 GLN n 1 484 ARG n 1 485 ARG n 1 486 ILE n 1 487 LYS n 1 488 ILE n 1 489 LEU n 1 490 ALA n 1 491 ASN n 1 492 SER n 1 493 TYR n 1 494 TYR n 1 495 GLY n 1 496 TYR n 1 497 TYR n 1 498 GLY n 1 499 TYR n 1 500 ALA n 1 501 ARG n 1 502 ALA n 1 503 ARG n 1 504 TRP n 1 505 TYR n 1 506 CYS n 1 507 LYS n 1 508 GLU n 1 509 CYS n 1 510 ALA n 1 511 GLU n 1 512 SER n 1 513 VAL n 1 514 THR n 1 515 ALA n 1 516 TRP n 1 517 GLY n 1 518 ARG n 1 519 GLU n 1 520 TYR n 1 521 ILE n 1 522 THR n 1 523 MET n 1 524 THR n 1 525 ILE n 1 526 LYS n 1 527 GLU n 1 528 ILE n 1 529 GLU n 1 530 GLU n 1 531 LYS n 1 532 TYR n 1 533 GLY n 1 534 PHE n 1 535 LYS n 1 536 VAL n 1 537 ILE n 1 538 TYR n 1 539 SER n 1 540 ASP n 1 541 THR n 1 542 ASP n 1 543 GLY n 1 544 PHE n 1 545 PHE n 1 546 ALA n 1 547 THR n 1 548 ILE n 1 549 PRO n 1 550 GLY n 1 551 ALA n 1 552 ASP n 1 553 ALA n 1 554 GLU n 1 555 THR n 1 556 VAL n 1 557 LYS n 1 558 LYS n 1 559 LYS n 1 560 ALA n 1 561 MET n 1 562 GLU n 1 563 PHE n 1 564 LEU n 1 565 LYS n 1 566 TYR n 1 567 ILE n 1 568 ASN n 1 569 ALA n 1 570 LYS n 1 571 LEU n 1 572 PRO n 1 573 GLY n 1 574 ALA n 1 575 LEU n 1 576 GLU n 1 577 LEU n 1 578 GLU n 1 579 TYR n 1 580 GLU n 1 581 GLY n 1 582 PHE n 1 583 TYR n 1 584 LYS n 1 585 ARG n 1 586 GLY n 1 587 PHE n 1 588 PHE n 1 589 VAL n 1 590 THR n 1 591 LYS n 1 592 LYS n 1 593 LYS n 1 594 TYR n 1 595 ALA n 1 596 VAL n 1 597 ILE n 1 598 ASP n 1 599 GLU n 1 600 GLU n 1 601 GLY n 1 602 LYS n 1 603 ILE n 1 604 THR n 1 605 THR n 1 606 ARG n 1 607 GLY n 1 608 LEU n 1 609 GLU n 1 610 ILE n 1 611 VAL n 1 612 ARG n 1 613 ARG n 1 614 ASP n 1 615 TRP n 1 616 SER n 1 617 GLU n 1 618 ILE n 1 619 ALA n 1 620 LYS n 1 621 GLU n 1 622 THR n 1 623 GLN n 1 624 ALA n 1 625 ARG n 1 626 VAL n 1 627 LEU n 1 628 GLU n 1 629 ALA n 1 630 LEU n 1 631 LEU n 1 632 LYS n 1 633 ASP n 1 634 GLY n 1 635 ASP n 1 636 VAL n 1 637 GLU n 1 638 LYS n 1 639 ALA n 1 640 VAL n 1 641 ARG n 1 642 ILE n 1 643 VAL n 1 644 LYS n 1 645 GLU n 1 646 VAL n 1 647 THR n 1 648 GLU n 1 649 LYS n 1 650 LEU n 1 651 SER n 1 652 LYS n 1 653 TYR n 1 654 GLU n 1 655 VAL n 1 656 PRO n 1 657 PRO n 1 658 GLU n 1 659 LYS n 1 660 LEU n 1 661 VAL n 1 662 ILE n 1 663 HIS n 1 664 ILE n 1 665 GLN n 1 666 ILE n 1 667 THR n 1 668 ARG n 1 669 ASP n 1 670 LEU n 1 671 LYS n 1 672 ASP n 1 673 TYR n 1 674 LYS n 1 675 ALA n 1 676 THR n 1 677 GLY n 1 678 PRO n 1 679 HIS n 1 680 VAL n 1 681 ALA n 1 682 VAL n 1 683 ALA n 1 684 LYS n 1 685 ARG n 1 686 LEU n 1 687 ALA n 1 688 ALA n 1 689 ARG n 1 690 GLY n 1 691 VAL n 1 692 LYS n 1 693 ILE n 1 694 ARG n 1 695 PRO n 1 696 GLY n 1 697 THR n 1 698 VAL n 1 699 ILE n 1 700 SER n 1 701 TYR n 1 702 ILE n 1 703 VAL n 1 704 LEU n 1 705 LYS n 1 706 GLY n 1 707 SER n 1 708 GLY n 1 709 ARG n 1 710 ILE n 1 711 GLY n 1 712 ASP n 1 713 ARG n 1 714 ALA n 1 715 ILE n 1 716 PRO n 1 717 PHE n 1 718 ASP n 1 719 GLU n 1 720 PHE n 1 721 ASP n 1 722 PRO n 1 723 THR n 1 724 LYS n 1 725 HIS n 1 726 LYS n 1 727 TYR n 1 728 ASP n 1 729 ALA n 1 730 GLU n 1 731 TYR n 1 732 TYR n 1 733 ILE n 1 734 GLU n 1 735 ASN n 1 736 GLN n 1 737 VAL n 1 738 LEU n 1 739 PRO n 1 740 ALA n 1 741 VAL n 1 742 GLU n 1 743 ARG n 1 744 ILE n 1 745 LEU n 1 746 ARG n 1 747 ALA n 1 748 PHE n 1 749 GLY n 1 750 TYR n 1 751 ARG n 1 752 LYS n 1 753 GLU n 1 754 ASP n 1 755 LEU n 1 756 ARG n 1 757 TYR n 1 758 GLN n 1 759 LYS n 1 760 THR n 1 761 ARG n 1 762 GLN n 1 763 VAL n 1 764 GLY n 1 765 LEU n 1 766 SER n 1 767 ALA n 1 768 TRP n 1 769 LEU n 1 770 LYS n 1 771 PRO n 1 772 LYS n 1 773 GLY n 1 774 THR n 2 1 DA n 2 2 DA n 2 3 DA n 2 4 DT n 2 5 DT n 2 6 DC n 2 7 DG n 2 8 DC n 2 9 DA n 2 10 DG n 2 11 DT n 2 12 DT n 2 13 DC n 2 14 DG n 2 15 DC n 2 16 DG n 3 1 DC n 3 2 DG n 3 3 DC n 3 4 DG n 3 5 DA n 3 6 DA n 3 7 DC n 3 8 DT n 3 9 DG n 3 10 DC n 3 11 DG n 3 12 9O4 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 774 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermococcus kodakarensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 311400 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 16 'synthetic construct' ? 32630 ? 3 1 sample 1 12 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP D0VWU9_THEKO D0VWU9 ? 1 ;MILDTDYITEDGKPVIRIFKKENGEFKIEYDRTFEPYFYALLKDDSAIEEVKKITAERHGTVVTVKRVEKVQKKFLGRPV EVWKLYFTHPQDVPAIRDKIREHPAVIDIYEYDIPFAKRYLIDKGLVPMEGDEELKMLAFDIETLYEEGEEFAEGPILMI SYADEEGARVITWKNVDLPYVDVVSTEREMIKRFLRVVKEKDPDVLITYNGDNFDFAYLKKRCEKLGINFALGRDGSEPK IQRMGDRFAVEVKGRIHFDLYPVIRRTINLPTYTLEAVYEAVFGQPKEKVYAEEITTAWETGENLERVARYSMEDAKVTY ELGKEFLPMEAQLSRLIGQSLWDVSRSSTGNLVEWFLLRKAYERNELAPNKPDEKELARRRQSYEGGYVKEPERGLWENI VYLDFRSLYPSIIITHNVSPDTLNREGCKEYDVAPQVGHRFCKDFPGFIPSLLGDLLEERQKIKKKMKATIDPIERKLLD YRQRAIKILANSYYGYYGYARARWYCKECAESVTAWGREYITMTIKEIEEKYGFKVIYSDTDGFFATIPGADAETVKKKA MEFLKYINAKLPGALELEYEGFYERGFFVTKKKYAVIDEEGKITTRGLEIVRRDWSEIAKETQARVLEALLKDGDVEKAV RIVKEVTEKLSKYEVPPEKLVIHEQITRDLKDYKATGPHVAVAKRLAARGVKIRPGTVISYIVLKGSGRIGDRAIPFDEF DPTKHKYDAEYYIENQVLPAVERILRAFGYRKEDLRYQKTRQVGLSAWLKPKGT ; 1 2 PDB 5VU8 5VU8 ? 2 ? 1 3 PDB 5VU8 5VU8 ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VU8 A 1 ? 774 ? D0VWU9 1 ? 774 ? 1 774 2 2 5VU8 T 1 ? 16 ? 5VU8 1 ? 16 ? 1 16 3 3 5VU8 P 1 ? 12 ? 5VU8 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VU8 ALA A 141 ? UNP D0VWU9 ASP 141 'engineered mutation' 141 1 1 5VU8 ALA A 143 ? UNP D0VWU9 GLU 143 'engineered mutation' 143 2 1 5VU8 HIS A 147 ? UNP D0VWU9 GLU 147 'engineered mutation' 147 3 1 5VU8 ARG A 485 ? UNP D0VWU9 ALA 485 'engineered mutation' 485 4 1 5VU8 LYS A 584 ? UNP D0VWU9 GLU 584 'engineered mutation' 584 5 1 5VU8 ILE A 664 ? UNP D0VWU9 GLU 664 'engineered mutation' 664 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 9O4 'DNA linking' . '(3R,5R)-5-(6-amino-9H-purin-9-yl)oxolan-3-yl dihydrogen phosphate' ? 'C9 H12 N5 O5 P' 301.196 9O7 non-polymer . '[(3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate' ? 'C9 H14 N5 O12 P3' 477.155 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VU8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.90 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 57.66 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M sodium sulfate, 0.1 M MES, pH 4.0, 3% w/v 1,6-hexanediol, 19% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-10-02 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'double crystal Si(111)' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5VU8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 43.424 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 19544 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.0 _reflns.pdbx_Rmerge_I_obs 0.275 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.2 _reflns_shell.d_res_low 3.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.100 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VU8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.200 _refine.ls_d_res_low 43.424 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 19544 _refine.ls_number_reflns_R_free 1616 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.58 _refine.ls_percent_reflns_R_free 8.27 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2608 _refine.ls_R_factor_R_free 0.2946 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2577 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 35.98 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.51 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 6120 _refine_hist.pdbx_number_atoms_nucleic_acid 528 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 6681 _refine_hist.d_res_high 3.200 _refine_hist.d_res_low 43.424 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 6880 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.540 ? 9410 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.321 ? 4056 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.039 ? 1019 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 1108 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.2000 3.2941 . . 134 1472 100.00 . . . 0.3855 . 0.3656 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2941 3.4004 . . 131 1456 100.00 . . . 0.3672 . 0.3442 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4004 3.5219 . . 130 1465 99.00 . . . 0.3267 . 0.3324 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5219 3.6629 . . 134 1468 99.00 . . . 0.3783 . 0.3288 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.6629 3.8295 . . 135 1488 100.00 . . . 0.3067 . 0.2966 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.8295 4.0312 . . 132 1474 100.00 . . . 0.3842 . 0.2986 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0312 4.2836 . . 134 1476 99.00 . . . 0.2639 . 0.2333 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.2836 4.6140 . . 133 1472 100.00 . . . 0.2634 . 0.2134 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.6140 5.0777 . . 134 1496 100.00 . . . 0.2725 . 0.1999 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0777 5.8109 . . 136 1508 100.00 . . . 0.2692 . 0.2319 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.8109 7.3155 . . 138 1542 100.00 . . . 0.2775 . 0.2808 . . . . . . . . . . 'X-RAY DIFFRACTION' 7.3155 43.4283 . . 145 1611 100.00 . . . 0.2734 . 0.2292 . . . . . . . . . . # _struct.entry_id 5VU8 _struct.title 'TNA polymerase, closed ternary complex' _struct.pdbx_descriptor 'DNA polymerase/DNA Complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VU8 _struct_keywords.text 'protein-nucleic acid complex, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 44 ? ILE A 48 ? ASP A 44 ILE A 48 5 ? 5 HELX_P HELX_P2 AA2 GLN A 91 ? GLU A 102 ? GLN A 91 GLU A 102 1 ? 12 HELX_P HELX_P3 AA3 PRO A 115 ? ASP A 123 ? PRO A 115 ASP A 123 1 ? 9 HELX_P HELX_P4 AA4 THR A 186 ? ASP A 202 ? THR A 186 ASP A 202 1 ? 17 HELX_P HELX_P5 AA5 PHE A 214 ? GLY A 227 ? PHE A 214 GLY A 227 1 ? 14 HELX_P HELX_P6 AA6 LEU A 260 ? ILE A 268 ? LEU A 260 ILE A 268 1 ? 9 HELX_P HELX_P7 AA7 THR A 274 ? GLY A 284 ? THR A 274 GLY A 284 1 ? 11 HELX_P HELX_P8 AA8 TYR A 291 ? THR A 301 ? TYR A 291 THR A 301 1 ? 11 HELX_P HELX_P9 AA9 ASN A 304 ? PHE A 326 ? ASN A 304 PHE A 326 1 ? 23 HELX_P HELX_P10 AB1 PHE A 326 ? GLY A 338 ? PHE A 326 GLY A 338 1 ? 13 HELX_P HELX_P11 AB2 SER A 340 ? SER A 347 ? SER A 340 SER A 347 1 ? 8 HELX_P HELX_P12 AB3 SER A 348 ? ARG A 364 ? SER A 348 ARG A 364 1 ? 17 HELX_P HELX_P13 AB4 ASP A 373 ? ARG A 380 ? ASP A 373 ARG A 380 1 ? 8 HELX_P HELX_P14 AB5 SER A 407 ? ASN A 417 ? SER A 407 ASN A 417 1 ? 11 HELX_P HELX_P15 AB6 ILE A 449 ? ALA A 469 ? ILE A 449 ALA A 469 1 ? 21 HELX_P HELX_P16 AB7 ASP A 472 ? TYR A 499 ? ASP A 472 TYR A 499 1 ? 28 HELX_P HELX_P17 AB8 CYS A 506 ? GLU A 530 ? CYS A 506 GLU A 530 1 ? 25 HELX_P HELX_P18 AB9 ASP A 552 ? ALA A 569 ? ASP A 552 ALA A 569 1 ? 18 HELX_P HELX_P19 AC1 SER A 616 ? GLY A 634 ? SER A 616 GLY A 634 1 ? 19 HELX_P HELX_P20 AC2 ASP A 635 ? LYS A 652 ? ASP A 635 LYS A 652 1 ? 18 HELX_P HELX_P21 AC3 VAL A 680 ? ARG A 685 ? VAL A 680 ARG A 685 1 ? 6 HELX_P HELX_P22 AC4 LEU A 738 ? ARG A 746 ? LEU A 738 ARG A 746 1 ? 9 HELX_P HELX_P23 AC5 ALA A 747 ? GLY A 749 ? ALA A 747 GLY A 749 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 428 SG ? ? ? 1_555 A CYS 442 SG ? ? A CYS 428 A CYS 442 1_555 ? ? ? ? ? ? ? 2.030 ? disulf2 disulf ? ? A CYS 506 SG ? ? ? 1_555 A CYS 509 SG ? ? A CYS 506 A CYS 509 1_555 ? ? ? ? ? ? ? 2.030 ? metalc1 metalc ? ? A GLU 580 OE1 ? ? ? 1_555 F MG . MG ? ? A GLU 580 A MG 803 1_555 ? ? ? ? ? ? ? 2.887 ? covale1 covale both ? C DG 11 "O3'" ? ? ? 1_555 C 9O4 12 P ? ? P DG 11 P 9O4 12 1_555 ? ? ? ? ? ? ? 1.600 ? metalc2 metalc ? ? C 9O4 12 O1P ? ? ? 1_555 G MG . MG ? ? P 9O4 12 P MG 101 1_555 ? ? ? ? ? ? ? 2.741 ? metalc3 metalc ? ? D 9O7 . O1A ? ? ? 1_555 E MG . MG ? ? A 9O7 801 A MG 802 1_555 ? ? ? ? ? ? ? 2.433 ? metalc4 metalc ? ? D 9O7 . O1A ? ? ? 1_555 G MG . MG ? ? A 9O7 801 P MG 101 1_555 ? ? ? ? ? ? ? 2.464 ? metalc5 metalc ? ? D 9O7 . O2G ? ? ? 1_555 F MG . MG ? ? A 9O7 801 A MG 803 1_555 ? ? ? ? ? ? ? 2.020 ? metalc6 metalc ? ? D 9O7 . O3G ? ? ? 1_555 F MG . MG ? ? A 9O7 801 A MG 803 1_555 ? ? ? ? ? ? ? 2.842 ? metalc7 metalc ? ? D 9O7 . O1G ? ? ? 1_555 F MG . MG ? ? A 9O7 801 A MG 803 1_555 ? ? ? ? ? ? ? 2.415 ? hydrog1 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 11 N1 ? ? T DC 6 P DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog2 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 11 O6 ? ? T DC 6 P DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 11 N2 ? ? T DC 6 P DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B DG 7 N1 ? ? ? 1_555 C DC 10 N3 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B DG 7 N2 ? ? ? 1_555 C DC 10 O2 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog6 hydrog ? ? B DG 7 O6 ? ? ? 1_555 C DC 10 N4 ? ? T DG 7 P DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog7 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? hydrog8 hydrog ? ? B DA 9 N1 ? ? ? 1_555 C DT 8 N3 ? ? T DA 9 P DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog9 hydrog ? ? B DA 9 N6 ? ? ? 1_555 C DT 8 O4 ? ? T DA 9 P DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B DG 10 N1 ? ? ? 1_555 C DC 7 N3 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B DG 10 N2 ? ? ? 1_555 C DC 7 O2 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog12 hydrog ? ? B DG 10 O6 ? ? ? 1_555 C DC 7 N4 ? ? T DG 10 P DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog13 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 6 N1 ? ? T DT 11 P DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 6 N6 ? ? T DT 11 P DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B DT 12 N3 ? ? ? 1_555 C DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog16 hydrog ? ? B DT 12 O4 ? ? ? 1_555 C DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog17 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog18 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog19 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B DC 15 N4 ? ? ? 1_555 C DG 2 O6 ? ? T DC 15 P DG 2 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? covale ? ? hydrog ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ARG 709 A . ? ARG 709 A ILE 710 A ? ILE 710 A 1 20.99 2 ALA 714 A . ? ALA 714 A ILE 715 A ? ILE 715 A 1 12.12 3 ARG 756 A . ? ARG 756 A TYR 757 A ? TYR 757 A 1 12.85 4 GLN 758 A . ? GLN 758 A LYS 759 A ? LYS 759 A 1 0.97 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 2 ? AA4 ? 6 ? AA5 ? 2 ? AA6 ? 6 ? AA7 ? 2 ? AA8 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? parallel AA4 5 6 ? parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA7 1 2 ? anti-parallel AA8 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 2 ? GLU A 10 ? ILE A 2 GLU A 10 AA1 2 LYS A 13 ? GLU A 22 ? LYS A 13 GLU A 22 AA1 3 GLU A 25 ? ASP A 31 ? GLU A 25 ASP A 31 AA2 1 VAL A 68 ? PHE A 75 ? VAL A 68 PHE A 75 AA2 2 ARG A 78 ? TYR A 86 ? ARG A 78 TYR A 86 AA2 3 TYR A 37 ? LEU A 42 ? TYR A 37 LEU A 42 AA2 4 VAL A 106 ? TYR A 110 ? VAL A 106 TYR A 110 AA3 1 ALA A 56 ? GLU A 57 ? ALA A 56 GLU A 57 AA3 2 VAL A 62 ? VAL A 63 ? VAL A 62 VAL A 63 AA4 1 VAL A 181 ? VAL A 183 ? VAL A 181 VAL A 183 AA4 2 ALA A 168 ? THR A 172 ? ALA A 168 THR A 172 AA4 3 ILE A 157 ? ALA A 163 ? ILE A 157 ALA A 163 AA4 4 MET A 137 ? THR A 144 ? MET A 137 THR A 144 AA4 5 VAL A 205 ? THR A 208 ? VAL A 205 THR A 208 AA4 6 ILE A 256 ? ASP A 259 ? ILE A 256 ASP A 259 AA5 1 LYS A 240 ? MET A 244 ? LYS A 240 MET A 244 AA5 2 ARG A 247 ? GLU A 251 ? ARG A 247 GLU A 251 AA6 1 TYR A 538 ? SER A 539 ? TYR A 538 SER A 539 AA6 2 GLY A 543 ? ALA A 546 ? GLY A 543 ALA A 546 AA6 3 GLY A 395 ? PHE A 405 ? GLY A 395 PHE A 405 AA6 4 LEU A 577 ? THR A 590 ? LEU A 577 THR A 590 AA6 5 LYS A 593 ? ILE A 597 ? LYS A 593 ILE A 597 AA6 6 ILE A 603 ? ARG A 606 ? ILE A 603 ARG A 606 AA7 1 TYR A 431 ? VAL A 433 ? TYR A 431 VAL A 433 AA7 2 ARG A 440 ? CYS A 442 ? ARG A 440 CYS A 442 AA8 1 ILE A 662 ? ILE A 666 ? ILE A 662 ILE A 666 AA8 2 THR A 697 ? TYR A 701 ? THR A 697 TYR A 701 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 6 ? N ASP A 6 O ARG A 17 ? O ARG A 17 AA1 2 3 N ILE A 18 ? N ILE A 18 O GLU A 29 ? O GLU A 29 AA2 1 2 N GLU A 69 ? N GLU A 69 O LYS A 84 ? O LYS A 84 AA2 2 3 O TRP A 83 ? O TRP A 83 N ALA A 40 ? N ALA A 40 AA2 3 4 N LEU A 41 ? N LEU A 41 O ILE A 107 ? O ILE A 107 AA3 1 2 N ALA A 56 ? N ALA A 56 O VAL A 63 ? O VAL A 63 AA4 1 2 O ASP A 182 ? O ASP A 182 N VAL A 170 ? N VAL A 170 AA4 2 3 O ARG A 169 ? O ARG A 169 N TYR A 162 ? N TYR A 162 AA4 3 4 O LEU A 158 ? O LEU A 158 N ALA A 143 ? N ALA A 143 AA4 4 5 N LEU A 138 ? N LEU A 138 O ILE A 207 ? O ILE A 207 AA4 5 6 N LEU A 206 ? N LEU A 206 O PHE A 258 ? O PHE A 258 AA5 1 2 N LYS A 240 ? N LYS A 240 O GLU A 251 ? O GLU A 251 AA6 1 2 N TYR A 538 ? N TYR A 538 O PHE A 545 ? O PHE A 545 AA6 2 3 O ALA A 546 ? O ALA A 546 N VAL A 401 ? N VAL A 401 AA6 3 4 N ASN A 399 ? N ASN A 399 O LYS A 584 ? O LYS A 584 AA6 4 5 N PHE A 587 ? N PHE A 587 O ALA A 595 ? O ALA A 595 AA6 5 6 N VAL A 596 ? N VAL A 596 O THR A 604 ? O THR A 604 AA7 1 2 N ASP A 432 ? N ASP A 432 O PHE A 441 ? O PHE A 441 AA8 1 2 N ILE A 666 ? N ILE A 666 O THR A 697 ? O THR A 697 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 9O7 801 ? 16 'binding site for residue 9O7 A 801' AC2 Software A MG 802 ? 3 'binding site for residue MG A 802' AC3 Software A MG 803 ? 3 'binding site for residue MG A 803' AC4 Software P MG 101 ? 3 'binding site for residue MG P 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 ASP A 404 ? ASP A 404 . ? 1_555 ? 2 AC1 16 PHE A 405 ? PHE A 405 . ? 1_555 ? 3 AC1 16 SER A 407 ? SER A 407 . ? 1_555 ? 4 AC1 16 ARG A 460 ? ARG A 460 . ? 1_555 ? 5 AC1 16 LYS A 487 ? LYS A 487 . ? 1_555 ? 6 AC1 16 ASN A 491 ? ASN A 491 . ? 1_555 ? 7 AC1 16 THR A 541 ? THR A 541 . ? 1_555 ? 8 AC1 16 ASP A 542 ? ASP A 542 . ? 1_555 ? 9 AC1 16 GLU A 578 ? GLU A 578 . ? 1_555 ? 10 AC1 16 GLU A 580 ? GLU A 580 . ? 1_555 ? 11 AC1 16 MG E . ? MG A 802 . ? 1_555 ? 12 AC1 16 MG F . ? MG A 803 . ? 1_555 ? 13 AC1 16 9O4 C 12 ? 9O4 P 12 . ? 1_555 ? 14 AC1 16 MG G . ? MG P 101 . ? 1_555 ? 15 AC1 16 DT B 4 ? DT T 4 . ? 1_555 ? 16 AC1 16 DT B 5 ? DT T 5 . ? 1_555 ? 17 AC2 3 TYR A 402 ? TYR A 402 . ? 1_555 ? 18 AC2 3 ASP A 542 ? ASP A 542 . ? 1_555 ? 19 AC2 3 9O7 D . ? 9O7 A 801 . ? 1_555 ? 20 AC3 3 GLU A 578 ? GLU A 578 . ? 1_555 ? 21 AC3 3 GLU A 580 ? GLU A 580 . ? 1_555 ? 22 AC3 3 9O7 D . ? 9O7 A 801 . ? 1_555 ? 23 AC4 3 LYS A 487 ? LYS A 487 . ? 1_555 ? 24 AC4 3 9O7 D . ? 9O7 A 801 . ? 1_555 ? 25 AC4 3 9O4 C 12 ? 9O4 P 12 . ? 1_555 ? # _atom_sites.entry_id 5VU8 _atom_sites.fract_transf_matrix[1][1] 0.013834 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009314 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006769 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 PHE 19 19 19 PHE PHE A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 LYS 21 21 21 LYS LYS A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 PRO 36 36 36 PRO PRO A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 SER 46 46 46 SER SER A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 VAL 65 65 65 VAL VAL A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 LYS 73 73 73 LYS LYS A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 PHE 75 75 75 PHE PHE A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 ARG 78 78 78 ARG ARG A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 VAL 80 80 80 VAL VAL A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 TRP 83 83 83 TRP TRP A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 TYR 86 86 86 TYR TYR A . n A 1 87 PHE 87 87 87 PHE PHE A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 HIS 89 89 89 HIS HIS A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 ASP 92 92 92 ASP ASP A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 HIS 103 103 103 HIS HIS A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 VAL 106 106 106 VAL VAL A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 ILE 109 109 109 ILE ILE A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 TYR 112 112 112 TYR TYR A . n A 1 113 ASP 113 113 113 ASP ASP A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 PRO 115 115 115 PRO PRO A . n A 1 116 PHE 116 116 116 PHE PHE A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 TYR 120 120 120 TYR TYR A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ILE 122 122 122 ILE ILE A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 MET 129 129 129 MET MET A . n A 1 130 GLU 130 130 130 GLU GLU A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 GLU 133 133 133 GLU GLU A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 MET 137 137 137 MET MET A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 THR 144 144 144 THR THR A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 TYR 146 146 146 TYR TYR A . n A 1 147 HIS 147 147 147 HIS HIS A . n A 1 148 GLU 148 148 148 GLU GLU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 GLU 150 150 150 GLU ALA A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 GLU 154 154 154 GLU ALA A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 PRO 156 156 156 PRO PRO A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 MET 159 159 159 MET MET A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 SER 161 161 161 SER SER A . n A 1 162 TYR 162 162 162 TYR TYR A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 ASP 164 164 164 ASP ASP A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 ALA 168 168 168 ALA ALA A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 THR 172 172 172 THR THR A . n A 1 173 TRP 173 173 173 TRP TRP A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 VAL 176 176 176 VAL VAL A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 VAL 181 181 181 VAL VAL A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 SER 185 185 185 SER SER A . n A 1 186 THR 186 186 186 THR THR A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 MET 190 190 190 MET MET A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 LYS 192 192 192 LYS LYS A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 ARG 196 196 196 ARG ARG A . n A 1 197 VAL 197 197 197 VAL VAL A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 LYS 199 199 199 LYS LYS A . n A 1 200 GLU 200 200 200 GLU ALA A . n A 1 201 LYS 201 201 201 LYS LYS A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 PRO 203 203 203 PRO PRO A . n A 1 204 ASP 204 204 204 ASP ASP A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 THR 208 208 208 THR THR A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 ASN 210 210 210 ASN ASN A . n A 1 211 GLY 211 211 211 GLY GLY A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 ASN 213 213 213 ASN ASN A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 ASP 215 215 215 ASP ASP A . n A 1 216 PHE 216 216 216 PHE PHE A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 LYS 220 220 220 LYS LYS A . n A 1 221 LYS 221 221 221 LYS ALA A . n A 1 222 ARG 222 222 222 ARG ARG A . n A 1 223 CYS 223 223 223 CYS CYS A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 LYS 225 225 225 LYS LYS A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 GLY 227 227 227 GLY GLY A . n A 1 228 ILE 228 228 228 ILE ILE A . n A 1 229 ASN 229 229 229 ASN ASN A . n A 1 230 PHE 230 230 230 PHE PHE A . n A 1 231 ALA 231 231 231 ALA ALA A . n A 1 232 LEU 232 232 232 LEU LEU A . n A 1 233 GLY 233 233 233 GLY GLY A . n A 1 234 ARG 234 234 234 ARG ARG A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 GLU 238 238 238 GLU GLU A . n A 1 239 PRO 239 239 239 PRO PRO A . n A 1 240 LYS 240 240 240 LYS LYS A . n A 1 241 ILE 241 241 241 ILE ILE A . n A 1 242 GLN 242 242 242 GLN GLN A . n A 1 243 ARG 243 243 243 ARG ARG A . n A 1 244 MET 244 244 244 MET MET A . n A 1 245 GLY 245 245 245 GLY GLY A . n A 1 246 ASP 246 246 246 ASP ASP A . n A 1 247 ARG 247 247 247 ARG ARG A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 VAL 250 250 250 VAL VAL A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 VAL 252 252 252 VAL VAL A . n A 1 253 LYS 253 253 253 LYS LYS A . n A 1 254 GLY 254 254 254 GLY GLY A . n A 1 255 ARG 255 255 255 ARG ARG A . n A 1 256 ILE 256 256 256 ILE ILE A . n A 1 257 HIS 257 257 257 HIS HIS A . n A 1 258 PHE 258 258 258 PHE PHE A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 LEU 260 260 260 LEU LEU A . n A 1 261 TYR 261 261 261 TYR TYR A . n A 1 262 PRO 262 262 262 PRO PRO A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 ILE 264 264 264 ILE ILE A . n A 1 265 ARG 265 265 265 ARG ARG A . n A 1 266 ARG 266 266 266 ARG ARG A . n A 1 267 THR 267 267 267 THR THR A . n A 1 268 ILE 268 268 268 ILE ILE A . n A 1 269 ASN 269 269 269 ASN ASN A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 THR 272 272 272 THR THR A . n A 1 273 TYR 273 273 273 TYR TYR A . n A 1 274 THR 274 274 274 THR THR A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 ALA 277 277 277 ALA ALA A . n A 1 278 VAL 278 278 278 VAL VAL A . n A 1 279 TYR 279 279 279 TYR TYR A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 ALA 281 281 281 ALA ALA A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 PHE 283 283 283 PHE PHE A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 GLN 285 285 285 GLN ALA A . n A 1 286 PRO 286 286 286 PRO PRO A . n A 1 287 LYS 287 287 287 LYS LYS A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 LYS 289 289 289 LYS LYS A . n A 1 290 VAL 290 290 290 VAL VAL A . n A 1 291 TYR 291 291 291 TYR TYR A . n A 1 292 ALA 292 292 292 ALA ALA A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 GLU 294 294 294 GLU GLU A . n A 1 295 ILE 295 295 295 ILE ILE A . n A 1 296 THR 296 296 296 THR THR A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ALA 298 298 298 ALA ALA A . n A 1 299 TRP 299 299 299 TRP TRP A . n A 1 300 GLU 300 300 300 GLU GLU A . n A 1 301 THR 301 301 301 THR THR A . n A 1 302 GLY 302 302 302 GLY GLY A . n A 1 303 GLU 303 303 303 GLU GLU A . n A 1 304 ASN 304 304 304 ASN ASN A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 ARG 307 307 307 ARG ARG A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 ALA 309 309 309 ALA ALA A . n A 1 310 ARG 310 310 310 ARG ARG A . n A 1 311 TYR 311 311 311 TYR TYR A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 MET 313 313 313 MET MET A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 ASP 315 315 315 ASP ASP A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 LYS 317 317 317 LYS LYS A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 THR 319 319 319 THR THR A . n A 1 320 TYR 320 320 320 TYR TYR A . n A 1 321 GLU 321 321 321 GLU GLU A . n A 1 322 LEU 322 322 322 LEU LEU A . n A 1 323 GLY 323 323 323 GLY GLY A . n A 1 324 LYS 324 324 324 LYS LYS A . n A 1 325 GLU 325 325 325 GLU GLU A . n A 1 326 PHE 326 326 326 PHE PHE A . n A 1 327 LEU 327 327 327 LEU LEU A . n A 1 328 PRO 328 328 328 PRO PRO A . n A 1 329 MET 329 329 329 MET MET A . n A 1 330 GLU 330 330 330 GLU GLU A . n A 1 331 ALA 331 331 331 ALA ALA A . n A 1 332 GLN 332 332 332 GLN GLN A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 SER 334 334 334 SER SER A . n A 1 335 ARG 335 335 335 ARG ARG A . n A 1 336 LEU 336 336 336 LEU LEU A . n A 1 337 ILE 337 337 337 ILE ILE A . n A 1 338 GLY 338 338 338 GLY GLY A . n A 1 339 GLN 339 339 339 GLN GLN A . n A 1 340 SER 340 340 340 SER SER A . n A 1 341 LEU 341 341 341 LEU LEU A . n A 1 342 TRP 342 342 342 TRP TRP A . n A 1 343 ASP 343 343 343 ASP ASP A . n A 1 344 VAL 344 344 344 VAL VAL A . n A 1 345 SER 345 345 345 SER SER A . n A 1 346 ARG 346 346 346 ARG ALA A . n A 1 347 SER 347 347 347 SER SER A . n A 1 348 SER 348 348 348 SER SER A . n A 1 349 THR 349 349 349 THR THR A . n A 1 350 GLY 350 350 350 GLY GLY A . n A 1 351 ASN 351 351 351 ASN ASN A . n A 1 352 LEU 352 352 352 LEU LEU A . n A 1 353 VAL 353 353 353 VAL VAL A . n A 1 354 GLU 354 354 354 GLU GLU A . n A 1 355 TRP 355 355 355 TRP TRP A . n A 1 356 PHE 356 356 356 PHE PHE A . n A 1 357 LEU 357 357 357 LEU LEU A . n A 1 358 LEU 358 358 358 LEU LEU A . n A 1 359 ARG 359 359 359 ARG ARG A . n A 1 360 LYS 360 360 360 LYS LYS A . n A 1 361 ALA 361 361 361 ALA ALA A . n A 1 362 TYR 362 362 362 TYR TYR A . n A 1 363 GLU 363 363 363 GLU GLU A . n A 1 364 ARG 364 364 364 ARG ARG A . n A 1 365 ASN 365 365 365 ASN ASN A . n A 1 366 GLU 366 366 366 GLU GLU A . n A 1 367 LEU 367 367 367 LEU LEU A . n A 1 368 ALA 368 368 368 ALA ALA A . n A 1 369 PRO 369 369 369 PRO PRO A . n A 1 370 ASN 370 370 370 ASN ASN A . n A 1 371 LYS 371 371 371 LYS LYS A . n A 1 372 PRO 372 372 372 PRO PRO A . n A 1 373 ASP 373 373 373 ASP ASP A . n A 1 374 GLU 374 374 374 GLU GLU A . n A 1 375 LYS 375 375 375 LYS LYS A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 LEU 377 377 377 LEU LEU A . n A 1 378 ALA 378 378 378 ALA ALA A . n A 1 379 ARG 379 379 379 ARG ARG A . n A 1 380 ARG 380 380 380 ARG ARG A . n A 1 381 ARG 381 381 381 ARG ARG A . n A 1 382 GLN 382 382 382 GLN GLN A . n A 1 383 SER 383 383 383 SER SER A . n A 1 384 TYR 384 384 384 TYR TYR A . n A 1 385 GLU 385 385 385 GLU ALA A . n A 1 386 GLY 386 386 386 GLY GLY A . n A 1 387 GLY 387 387 387 GLY GLY A . n A 1 388 TYR 388 388 388 TYR TYR A . n A 1 389 VAL 389 389 389 VAL VAL A . n A 1 390 LYS 390 390 390 LYS LYS A . n A 1 391 GLU 391 391 391 GLU GLU A . n A 1 392 PRO 392 392 392 PRO PRO A . n A 1 393 GLU 393 393 393 GLU GLU A . n A 1 394 ARG 394 394 394 ARG ALA A . n A 1 395 GLY 395 395 395 GLY GLY A . n A 1 396 LEU 396 396 396 LEU LEU A . n A 1 397 TRP 397 397 397 TRP TRP A . n A 1 398 GLU 398 398 398 GLU GLU A . n A 1 399 ASN 399 399 399 ASN ASN A . n A 1 400 ILE 400 400 400 ILE ILE A . n A 1 401 VAL 401 401 401 VAL VAL A . n A 1 402 TYR 402 402 402 TYR TYR A . n A 1 403 LEU 403 403 403 LEU LEU A . n A 1 404 ASP 404 404 404 ASP ASP A . n A 1 405 PHE 405 405 405 PHE PHE A . n A 1 406 ARG 406 406 406 ARG ARG A . n A 1 407 SER 407 407 407 SER SER A . n A 1 408 LEU 408 408 408 LEU LEU A . n A 1 409 TYR 409 409 409 TYR TYR A . n A 1 410 PRO 410 410 410 PRO PRO A . n A 1 411 SER 411 411 411 SER SER A . n A 1 412 ILE 412 412 412 ILE ILE A . n A 1 413 ILE 413 413 413 ILE ILE A . n A 1 414 ILE 414 414 414 ILE ILE A . n A 1 415 THR 415 415 415 THR THR A . n A 1 416 HIS 416 416 416 HIS HIS A . n A 1 417 ASN 417 417 417 ASN ASN A . n A 1 418 VAL 418 418 418 VAL VAL A . n A 1 419 SER 419 419 419 SER SER A . n A 1 420 PRO 420 420 420 PRO PRO A . n A 1 421 ASP 421 421 421 ASP ASP A . n A 1 422 THR 422 422 422 THR THR A . n A 1 423 LEU 423 423 423 LEU LEU A . n A 1 424 ASN 424 424 424 ASN ASN A . n A 1 425 ARG 425 425 425 ARG ARG A . n A 1 426 GLU 426 426 426 GLU GLU A . n A 1 427 GLY 427 427 427 GLY GLY A . n A 1 428 CYS 428 428 428 CYS CYS A . n A 1 429 LYS 429 429 429 LYS LYS A . n A 1 430 GLU 430 430 430 GLU GLU A . n A 1 431 TYR 431 431 431 TYR TYR A . n A 1 432 ASP 432 432 432 ASP ASP A . n A 1 433 VAL 433 433 433 VAL VAL A . n A 1 434 ALA 434 434 434 ALA ALA A . n A 1 435 PRO 435 435 435 PRO PRO A . n A 1 436 GLN 436 436 436 GLN GLN A . n A 1 437 VAL 437 437 437 VAL VAL A . n A 1 438 GLY 438 438 438 GLY GLY A . n A 1 439 HIS 439 439 439 HIS HIS A . n A 1 440 ARG 440 440 440 ARG ARG A . n A 1 441 PHE 441 441 441 PHE PHE A . n A 1 442 CYS 442 442 442 CYS CYS A . n A 1 443 LYS 443 443 443 LYS LYS A . n A 1 444 ASP 444 444 444 ASP ASP A . n A 1 445 PHE 445 445 445 PHE PHE A . n A 1 446 PRO 446 446 446 PRO PRO A . n A 1 447 GLY 447 447 447 GLY GLY A . n A 1 448 PHE 448 448 448 PHE PHE A . n A 1 449 ILE 449 449 449 ILE ILE A . n A 1 450 PRO 450 450 450 PRO PRO A . n A 1 451 SER 451 451 451 SER SER A . n A 1 452 LEU 452 452 452 LEU LEU A . n A 1 453 LEU 453 453 453 LEU LEU A . n A 1 454 GLY 454 454 454 GLY GLY A . n A 1 455 ASP 455 455 455 ASP ASP A . n A 1 456 LEU 456 456 456 LEU LEU A . n A 1 457 LEU 457 457 457 LEU LEU A . n A 1 458 GLU 458 458 458 GLU GLU A . n A 1 459 GLU 459 459 459 GLU GLU A . n A 1 460 ARG 460 460 460 ARG ARG A . n A 1 461 GLN 461 461 461 GLN GLN A . n A 1 462 LYS 462 462 462 LYS LYS A . n A 1 463 ILE 463 463 463 ILE ILE A . n A 1 464 LYS 464 464 464 LYS LYS A . n A 1 465 LYS 465 465 465 LYS LYS A . n A 1 466 LYS 466 466 466 LYS LYS A . n A 1 467 MET 467 467 467 MET MET A . n A 1 468 LYS 468 468 468 LYS LYS A . n A 1 469 ALA 469 469 469 ALA ALA A . n A 1 470 THR 470 470 470 THR THR A . n A 1 471 ILE 471 471 471 ILE ILE A . n A 1 472 ASP 472 472 472 ASP ASP A . n A 1 473 PRO 473 473 473 PRO PRO A . n A 1 474 ILE 474 474 474 ILE ILE A . n A 1 475 GLU 475 475 475 GLU GLU A . n A 1 476 ARG 476 476 476 ARG ALA A . n A 1 477 LYS 477 477 477 LYS LYS A . n A 1 478 LEU 478 478 478 LEU LEU A . n A 1 479 LEU 479 479 479 LEU LEU A . n A 1 480 ASP 480 480 480 ASP ASP A . n A 1 481 TYR 481 481 481 TYR TYR A . n A 1 482 ARG 482 482 482 ARG ARG A . n A 1 483 GLN 483 483 483 GLN GLN A . n A 1 484 ARG 484 484 484 ARG ARG A . n A 1 485 ARG 485 485 485 ARG ARG A . n A 1 486 ILE 486 486 486 ILE ILE A . n A 1 487 LYS 487 487 487 LYS LYS A . n A 1 488 ILE 488 488 488 ILE ILE A . n A 1 489 LEU 489 489 489 LEU LEU A . n A 1 490 ALA 490 490 490 ALA ALA A . n A 1 491 ASN 491 491 491 ASN ASN A . n A 1 492 SER 492 492 492 SER SER A . n A 1 493 TYR 493 493 493 TYR TYR A . n A 1 494 TYR 494 494 494 TYR TYR A . n A 1 495 GLY 495 495 495 GLY GLY A . n A 1 496 TYR 496 496 496 TYR TYR A . n A 1 497 TYR 497 497 497 TYR TYR A . n A 1 498 GLY 498 498 498 GLY GLY A . n A 1 499 TYR 499 499 499 TYR TYR A . n A 1 500 ALA 500 500 500 ALA ALA A . n A 1 501 ARG 501 501 501 ARG ARG A . n A 1 502 ALA 502 502 502 ALA ALA A . n A 1 503 ARG 503 503 503 ARG ARG A . n A 1 504 TRP 504 504 504 TRP TRP A . n A 1 505 TYR 505 505 505 TYR TYR A . n A 1 506 CYS 506 506 506 CYS CYS A . n A 1 507 LYS 507 507 507 LYS LYS A . n A 1 508 GLU 508 508 508 GLU GLU A . n A 1 509 CYS 509 509 509 CYS CYS A . n A 1 510 ALA 510 510 510 ALA ALA A . n A 1 511 GLU 511 511 511 GLU GLU A . n A 1 512 SER 512 512 512 SER SER A . n A 1 513 VAL 513 513 513 VAL VAL A . n A 1 514 THR 514 514 514 THR THR A . n A 1 515 ALA 515 515 515 ALA ALA A . n A 1 516 TRP 516 516 516 TRP TRP A . n A 1 517 GLY 517 517 517 GLY GLY A . n A 1 518 ARG 518 518 518 ARG ARG A . n A 1 519 GLU 519 519 519 GLU GLU A . n A 1 520 TYR 520 520 520 TYR TYR A . n A 1 521 ILE 521 521 521 ILE ILE A . n A 1 522 THR 522 522 522 THR THR A . n A 1 523 MET 523 523 523 MET MET A . n A 1 524 THR 524 524 524 THR THR A . n A 1 525 ILE 525 525 525 ILE ILE A . n A 1 526 LYS 526 526 526 LYS LYS A . n A 1 527 GLU 527 527 527 GLU GLU A . n A 1 528 ILE 528 528 528 ILE ALA A . n A 1 529 GLU 529 529 529 GLU GLU A . n A 1 530 GLU 530 530 530 GLU GLU A . n A 1 531 LYS 531 531 531 LYS ALA A . n A 1 532 TYR 532 532 532 TYR TYR A . n A 1 533 GLY 533 533 533 GLY GLY A . n A 1 534 PHE 534 534 534 PHE PHE A . n A 1 535 LYS 535 535 535 LYS LYS A . n A 1 536 VAL 536 536 536 VAL VAL A . n A 1 537 ILE 537 537 537 ILE ILE A . n A 1 538 TYR 538 538 538 TYR TYR A . n A 1 539 SER 539 539 539 SER SER A . n A 1 540 ASP 540 540 540 ASP ASP A . n A 1 541 THR 541 541 541 THR THR A . n A 1 542 ASP 542 542 542 ASP ASP A . n A 1 543 GLY 543 543 543 GLY GLY A . n A 1 544 PHE 544 544 544 PHE PHE A . n A 1 545 PHE 545 545 545 PHE PHE A . n A 1 546 ALA 546 546 546 ALA ALA A . n A 1 547 THR 547 547 547 THR THR A . n A 1 548 ILE 548 548 548 ILE ILE A . n A 1 549 PRO 549 549 549 PRO PRO A . n A 1 550 GLY 550 550 550 GLY GLY A . n A 1 551 ALA 551 551 551 ALA ALA A . n A 1 552 ASP 552 552 552 ASP ASP A . n A 1 553 ALA 553 553 553 ALA ALA A . n A 1 554 GLU 554 554 554 GLU GLU A . n A 1 555 THR 555 555 555 THR THR A . n A 1 556 VAL 556 556 556 VAL VAL A . n A 1 557 LYS 557 557 557 LYS LYS A . n A 1 558 LYS 558 558 558 LYS LYS A . n A 1 559 LYS 559 559 559 LYS LYS A . n A 1 560 ALA 560 560 560 ALA ALA A . n A 1 561 MET 561 561 561 MET MET A . n A 1 562 GLU 562 562 562 GLU GLU A . n A 1 563 PHE 563 563 563 PHE PHE A . n A 1 564 LEU 564 564 564 LEU LEU A . n A 1 565 LYS 565 565 565 LYS LYS A . n A 1 566 TYR 566 566 566 TYR TYR A . n A 1 567 ILE 567 567 567 ILE ILE A . n A 1 568 ASN 568 568 568 ASN ASN A . n A 1 569 ALA 569 569 569 ALA ALA A . n A 1 570 LYS 570 570 570 LYS LYS A . n A 1 571 LEU 571 571 571 LEU LEU A . n A 1 572 PRO 572 572 572 PRO PRO A . n A 1 573 GLY 573 573 573 GLY GLY A . n A 1 574 ALA 574 574 574 ALA ALA A . n A 1 575 LEU 575 575 575 LEU LEU A . n A 1 576 GLU 576 576 576 GLU GLU A . n A 1 577 LEU 577 577 577 LEU LEU A . n A 1 578 GLU 578 578 578 GLU GLU A . n A 1 579 TYR 579 579 579 TYR TYR A . n A 1 580 GLU 580 580 580 GLU GLU A . n A 1 581 GLY 581 581 581 GLY GLY A . n A 1 582 PHE 582 582 582 PHE PHE A . n A 1 583 TYR 583 583 583 TYR TYR A . n A 1 584 LYS 584 584 584 LYS LYS A . n A 1 585 ARG 585 585 585 ARG ARG A . n A 1 586 GLY 586 586 586 GLY GLY A . n A 1 587 PHE 587 587 587 PHE PHE A . n A 1 588 PHE 588 588 588 PHE PHE A . n A 1 589 VAL 589 589 589 VAL VAL A . n A 1 590 THR 590 590 590 THR THR A . n A 1 591 LYS 591 591 591 LYS LYS A . n A 1 592 LYS 592 592 592 LYS LYS A . n A 1 593 LYS 593 593 593 LYS LYS A . n A 1 594 TYR 594 594 594 TYR TYR A . n A 1 595 ALA 595 595 595 ALA ALA A . n A 1 596 VAL 596 596 596 VAL VAL A . n A 1 597 ILE 597 597 597 ILE ILE A . n A 1 598 ASP 598 598 598 ASP ASP A . n A 1 599 GLU 599 599 599 GLU GLU A . n A 1 600 GLU 600 600 600 GLU GLU A . n A 1 601 GLY 601 601 601 GLY GLY A . n A 1 602 LYS 602 602 602 LYS LYS A . n A 1 603 ILE 603 603 603 ILE ILE A . n A 1 604 THR 604 604 604 THR THR A . n A 1 605 THR 605 605 605 THR THR A . n A 1 606 ARG 606 606 606 ARG ARG A . n A 1 607 GLY 607 607 607 GLY GLY A . n A 1 608 LEU 608 608 608 LEU LEU A . n A 1 609 GLU 609 609 609 GLU GLU A . n A 1 610 ILE 610 610 610 ILE ILE A . n A 1 611 VAL 611 611 611 VAL VAL A . n A 1 612 ARG 612 612 612 ARG ARG A . n A 1 613 ARG 613 613 613 ARG ARG A . n A 1 614 ASP 614 614 614 ASP ASP A . n A 1 615 TRP 615 615 615 TRP TRP A . n A 1 616 SER 616 616 616 SER SER A . n A 1 617 GLU 617 617 617 GLU GLU A . n A 1 618 ILE 618 618 618 ILE ILE A . n A 1 619 ALA 619 619 619 ALA ALA A . n A 1 620 LYS 620 620 620 LYS LYS A . n A 1 621 GLU 621 621 621 GLU GLU A . n A 1 622 THR 622 622 622 THR THR A . n A 1 623 GLN 623 623 623 GLN GLN A . n A 1 624 ALA 624 624 624 ALA ALA A . n A 1 625 ARG 625 625 625 ARG ARG A . n A 1 626 VAL 626 626 626 VAL VAL A . n A 1 627 LEU 627 627 627 LEU LEU A . n A 1 628 GLU 628 628 628 GLU GLU A . n A 1 629 ALA 629 629 629 ALA ALA A . n A 1 630 LEU 630 630 630 LEU LEU A . n A 1 631 LEU 631 631 631 LEU LEU A . n A 1 632 LYS 632 632 632 LYS LYS A . n A 1 633 ASP 633 633 633 ASP ASP A . n A 1 634 GLY 634 634 634 GLY GLY A . n A 1 635 ASP 635 635 635 ASP ASP A . n A 1 636 VAL 636 636 636 VAL VAL A . n A 1 637 GLU 637 637 637 GLU GLU A . n A 1 638 LYS 638 638 638 LYS ALA A . n A 1 639 ALA 639 639 639 ALA ALA A . n A 1 640 VAL 640 640 640 VAL VAL A . n A 1 641 ARG 641 641 641 ARG ARG A . n A 1 642 ILE 642 642 642 ILE ILE A . n A 1 643 VAL 643 643 643 VAL VAL A . n A 1 644 LYS 644 644 644 LYS LYS A . n A 1 645 GLU 645 645 645 GLU GLU A . n A 1 646 VAL 646 646 646 VAL VAL A . n A 1 647 THR 647 647 647 THR THR A . n A 1 648 GLU 648 648 648 GLU GLU A . n A 1 649 LYS 649 649 649 LYS LYS A . n A 1 650 LEU 650 650 650 LEU LEU A . n A 1 651 SER 651 651 651 SER SER A . n A 1 652 LYS 652 652 652 LYS LYS A . n A 1 653 TYR 653 653 653 TYR TYR A . n A 1 654 GLU 654 654 654 GLU GLU A . n A 1 655 VAL 655 655 655 VAL VAL A . n A 1 656 PRO 656 656 656 PRO PRO A . n A 1 657 PRO 657 657 657 PRO PRO A . n A 1 658 GLU 658 658 ? ? ? A . n A 1 659 LYS 659 659 659 LYS LYS A . n A 1 660 LEU 660 660 660 LEU LEU A . n A 1 661 VAL 661 661 661 VAL VAL A . n A 1 662 ILE 662 662 662 ILE ILE A . n A 1 663 HIS 663 663 663 HIS HIS A . n A 1 664 ILE 664 664 664 ILE ILE A . n A 1 665 GLN 665 665 665 GLN GLN A . n A 1 666 ILE 666 666 666 ILE ILE A . n A 1 667 THR 667 667 667 THR THR A . n A 1 668 ARG 668 668 668 ARG ALA A . n A 1 669 ASP 669 669 669 ASP ASP A . n A 1 670 LEU 670 670 670 LEU LEU A . n A 1 671 LYS 671 671 671 LYS LYS A . n A 1 672 ASP 672 672 672 ASP ASP A . n A 1 673 TYR 673 673 673 TYR TYR A . n A 1 674 LYS 674 674 674 LYS LYS A . n A 1 675 ALA 675 675 675 ALA ALA A . n A 1 676 THR 676 676 676 THR THR A . n A 1 677 GLY 677 677 677 GLY GLY A . n A 1 678 PRO 678 678 678 PRO PRO A . n A 1 679 HIS 679 679 679 HIS HIS A . n A 1 680 VAL 680 680 680 VAL VAL A . n A 1 681 ALA 681 681 681 ALA ALA A . n A 1 682 VAL 682 682 682 VAL VAL A . n A 1 683 ALA 683 683 683 ALA ALA A . n A 1 684 LYS 684 684 684 LYS LYS A . n A 1 685 ARG 685 685 685 ARG ARG A . n A 1 686 LEU 686 686 686 LEU LEU A . n A 1 687 ALA 687 687 687 ALA ALA A . n A 1 688 ALA 688 688 688 ALA ALA A . n A 1 689 ARG 689 689 ? ? ? A . n A 1 690 GLY 690 690 690 GLY GLY A . n A 1 691 VAL 691 691 691 VAL VAL A . n A 1 692 LYS 692 692 692 LYS LYS A . n A 1 693 ILE 693 693 693 ILE ILE A . n A 1 694 ARG 694 694 694 ARG ARG A . n A 1 695 PRO 695 695 695 PRO PRO A . n A 1 696 GLY 696 696 696 GLY GLY A . n A 1 697 THR 697 697 697 THR THR A . n A 1 698 VAL 698 698 698 VAL VAL A . n A 1 699 ILE 699 699 699 ILE ILE A . n A 1 700 SER 700 700 700 SER SER A . n A 1 701 TYR 701 701 701 TYR TYR A . n A 1 702 ILE 702 702 702 ILE ILE A . n A 1 703 VAL 703 703 703 VAL VAL A . n A 1 704 LEU 704 704 704 LEU ALA A . n A 1 705 LYS 705 705 705 LYS ALA A . n A 1 706 GLY 706 706 706 GLY GLY A . n A 1 707 SER 707 707 707 SER SER A . n A 1 708 GLY 708 708 708 GLY GLY A . n A 1 709 ARG 709 709 709 ARG ARG A . n A 1 710 ILE 710 710 710 ILE ALA A . n A 1 711 GLY 711 711 711 GLY GLY A . n A 1 712 ASP 712 712 712 ASP ASP A . n A 1 713 ARG 713 713 713 ARG ALA A . n A 1 714 ALA 714 714 714 ALA ALA A . n A 1 715 ILE 715 715 715 ILE ILE A . n A 1 716 PRO 716 716 716 PRO PRO A . n A 1 717 PHE 717 717 717 PHE PHE A . n A 1 718 ASP 718 718 718 ASP ASP A . n A 1 719 GLU 719 719 719 GLU GLU A . n A 1 720 PHE 720 720 720 PHE PHE A . n A 1 721 ASP 721 721 721 ASP ASP A . n A 1 722 PRO 722 722 722 PRO PRO A . n A 1 723 THR 723 723 723 THR THR A . n A 1 724 LYS 724 724 724 LYS LYS A . n A 1 725 HIS 725 725 725 HIS ALA A . n A 1 726 LYS 726 726 726 LYS ALA A . n A 1 727 TYR 727 727 727 TYR ALA A . n A 1 728 ASP 728 728 728 ASP ALA A . n A 1 729 ALA 729 729 729 ALA ALA A . n A 1 730 GLU 730 730 730 GLU GLU A . n A 1 731 TYR 731 731 731 TYR TYR A . n A 1 732 TYR 732 732 732 TYR TYR A . n A 1 733 ILE 733 733 733 ILE ILE A . n A 1 734 GLU 734 734 734 GLU GLU A . n A 1 735 ASN 735 735 735 ASN ASN A . n A 1 736 GLN 736 736 736 GLN ALA A . n A 1 737 VAL 737 737 737 VAL VAL A . n A 1 738 LEU 738 738 738 LEU LEU A . n A 1 739 PRO 739 739 739 PRO PRO A . n A 1 740 ALA 740 740 740 ALA ALA A . n A 1 741 VAL 741 741 741 VAL VAL A . n A 1 742 GLU 742 742 742 GLU GLU A . n A 1 743 ARG 743 743 743 ARG ARG A . n A 1 744 ILE 744 744 744 ILE ILE A . n A 1 745 LEU 745 745 745 LEU LEU A . n A 1 746 ARG 746 746 746 ARG ARG A . n A 1 747 ALA 747 747 747 ALA ALA A . n A 1 748 PHE 748 748 748 PHE PHE A . n A 1 749 GLY 749 749 749 GLY GLY A . n A 1 750 TYR 750 750 750 TYR TYR A . n A 1 751 ARG 751 751 751 ARG ALA A . n A 1 752 LYS 752 752 752 LYS LYS A . n A 1 753 GLU 753 753 753 GLU GLU A . n A 1 754 ASP 754 754 754 ASP ASP A . n A 1 755 LEU 755 755 755 LEU LEU A . n A 1 756 ARG 756 756 756 ARG ARG A . n A 1 757 TYR 757 757 757 TYR TYR A . n A 1 758 GLN 758 758 758 GLN GLN A . n A 1 759 LYS 759 759 759 LYS LYS A . n A 1 760 THR 760 760 ? ? ? A . n A 1 761 ARG 761 761 ? ? ? A . n A 1 762 GLN 762 762 ? ? ? A . n A 1 763 VAL 763 763 ? ? ? A . n A 1 764 GLY 764 764 ? ? ? A . n A 1 765 LEU 765 765 ? ? ? A . n A 1 766 SER 766 766 ? ? ? A . n A 1 767 ALA 767 767 ? ? ? A . n A 1 768 TRP 768 768 ? ? ? A . n A 1 769 LEU 769 769 ? ? ? A . n A 1 770 LYS 770 770 ? ? ? A . n A 1 771 PRO 771 771 ? ? ? A . n A 1 772 LYS 772 772 ? ? ? A . n A 1 773 GLY 773 773 ? ? ? A . n A 1 774 THR 774 774 ? ? ? A . n B 2 1 DA 1 1 ? ? ? T . n B 2 2 DA 2 2 ? ? ? T . n B 2 3 DA 3 3 3 DA DA T . n B 2 4 DT 4 4 4 DT DT T . n B 2 5 DT 5 5 5 DT DT T . n B 2 6 DC 6 6 6 DC DC T . n B 2 7 DG 7 7 7 DG DG T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DA 9 9 9 DA DA T . n B 2 10 DG 10 10 10 DG DG T . n B 2 11 DT 11 11 11 DT DT T . n B 2 12 DT 12 12 12 DT DT T . n B 2 13 DC 13 13 13 DC DC T . n B 2 14 DG 14 14 14 DG DG T . n B 2 15 DC 15 15 15 DC DC T . n B 2 16 DG 16 16 16 DG DG T . n C 3 1 DC 1 1 1 DC DC P . n C 3 2 DG 2 2 2 DG DG P . n C 3 3 DC 3 3 3 DC DC P . n C 3 4 DG 4 4 4 DG DG P . n C 3 5 DA 5 5 5 DA DA P . n C 3 6 DA 6 6 6 DA DA P . n C 3 7 DC 7 7 7 DC DC P . n C 3 8 DT 8 8 8 DT DT P . n C 3 9 DG 9 9 9 DG DG P . n C 3 10 DC 10 10 10 DC DC P . n C 3 11 DG 11 11 11 DG DG P . n C 3 12 9O4 12 12 12 9O4 FA3 P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 9O7 1 801 1 9O7 TAT A . E 5 MG 1 802 2 MG MG A . F 5 MG 1 803 3 MG MG A . G 5 MG 1 101 1 MG MG P . H 6 HOH 1 901 1 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5100 ? 1 MORE -49 ? 1 'SSA (A^2)' 37850 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 580 ? A GLU 580 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O2G ? D 9O7 . ? A 9O7 801 ? 1_555 78.1 ? 2 OE1 ? A GLU 580 ? A GLU 580 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O3G ? D 9O7 . ? A 9O7 801 ? 1_555 109.5 ? 3 O2G ? D 9O7 . ? A 9O7 801 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O3G ? D 9O7 . ? A 9O7 801 ? 1_555 53.5 ? 4 OE1 ? A GLU 580 ? A GLU 580 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O1G ? D 9O7 . ? A 9O7 801 ? 1_555 139.6 ? 5 O2G ? D 9O7 . ? A 9O7 801 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O1G ? D 9O7 . ? A 9O7 801 ? 1_555 62.0 ? 6 O3G ? D 9O7 . ? A 9O7 801 ? 1_555 MG ? F MG . ? A MG 803 ? 1_555 O1G ? D 9O7 . ? A 9O7 801 ? 1_555 51.3 ? 7 O1P ? C 9O4 12 ? P 9O4 12 ? 1_555 MG ? G MG . ? P MG 101 ? 1_555 O1A ? D 9O7 . ? A 9O7 801 ? 1_555 95.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-12-06 2 'Structure model' 1 1 2017-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 101.3459 143.6048 483.5694 0.8711 0.7755 0.8494 -0.0765 0.0027 -0.0414 3.3297 2.0447 0.8314 -1.6776 0.5963 -0.0637 -0.0172 -0.0090 0.1208 0.1733 -0.0579 -0.1305 0.0815 -0.0392 0.0000 'X-RAY DIFFRACTION' 2 ? refined 88.9518 126.4301 468.5344 0.8089 0.8687 0.8614 -0.0386 0.0558 0.0596 0.4117 1.4023 1.1904 -0.2256 0.0915 0.7327 0.0648 0.0675 0.0874 -0.1769 -0.0914 0.1076 0.0951 -0.1910 -0.0000 'X-RAY DIFFRACTION' 3 ? refined 78.2455 137.4132 443.3424 1.6120 1.2490 1.2106 0.2254 -0.0451 0.1128 0.8290 1.2130 1.4039 -0.8331 -0.6362 0.0168 0.1161 0.4472 0.4819 -0.3707 0.1822 0.4877 -0.5770 -0.5662 0.0001 'X-RAY DIFFRACTION' 4 ? refined 95.3501 131.1330 445.1907 1.6975 1.1681 1.2435 -0.0571 -0.0620 0.2696 0.5321 0.2310 0.0626 -0.3609 0.1943 -0.1238 -0.3327 0.6253 0.9054 -0.8580 -0.0309 -0.4669 -0.7154 0.6000 -0.0003 'X-RAY DIFFRACTION' 5 ? refined 93.9169 131.3241 441.4398 2.0844 1.4894 0.9649 0.0067 -0.1040 0.1114 0.0096 0.0605 -0.0042 0.0366 -0.0032 -0.0038 0.4038 0.3457 0.0619 -0.1185 0.0069 -0.3386 0.1882 0.1587 0.0002 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 214 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 215 through 588 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 589 through 758 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'T' and (resid 3 through 16 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'P' and (resid 1 through 11 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.11.1_2575: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 580 ? ? MG A MG 803 ? ? 1.26 2 1 O2A A 9O7 801 ? ? MG A MG 802 ? ? 1.33 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "C3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 P _pdbx_validate_rmsd_angle.auth_comp_id_1 DG _pdbx_validate_rmsd_angle.auth_seq_id_1 11 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_2 P _pdbx_validate_rmsd_angle.auth_comp_id_2 DG _pdbx_validate_rmsd_angle.auth_seq_id_2 11 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 P _pdbx_validate_rmsd_angle.auth_asym_id_3 P _pdbx_validate_rmsd_angle.auth_comp_id_3 9O4 _pdbx_validate_rmsd_angle.auth_seq_id_3 12 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 148.27 _pdbx_validate_rmsd_angle.angle_target_value 119.70 _pdbx_validate_rmsd_angle.angle_deviation 28.57 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.20 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 52 ? ? -66.38 1.95 2 1 LYS A 66 ? ? -65.33 -80.08 3 1 LYS A 124 ? ? 63.19 -32.83 4 1 ALA A 153 ? ? -104.15 41.66 5 1 ASP A 164 ? ? -124.56 -140.31 6 1 SER A 185 ? ? -76.58 -70.34 7 1 PHE A 214 ? ? -128.77 -71.41 8 1 ARG A 255 ? ? -119.98 -166.33 9 1 ARG A 364 ? ? -67.71 1.34 10 1 GLN A 436 ? ? 59.06 -64.14 11 1 ILE A 449 ? ? 109.12 -51.55 12 1 TRP A 504 ? ? -88.79 48.68 13 1 TYR A 532 ? ? 67.46 -30.71 14 1 ASP A 540 ? ? -110.54 -70.43 15 1 THR A 541 ? ? -148.99 -43.67 16 1 TYR A 566 ? ? -103.18 59.74 17 1 ILE A 567 ? ? -168.62 -37.62 18 1 ASP A 614 ? ? -95.19 49.88 19 1 ASP A 633 ? ? -158.54 44.18 20 1 PRO A 656 ? ? -45.90 109.92 21 1 ARG A 668 ? ? 56.41 -127.65 22 1 ASP A 669 ? ? -160.04 103.72 23 1 LEU A 670 ? ? 50.15 -76.32 24 1 HIS A 679 ? ? -79.84 -166.78 25 1 VAL A 680 ? ? 62.05 -52.28 26 1 LEU A 704 ? ? -132.87 -151.25 27 1 LYS A 705 ? ? 59.47 -117.63 28 1 ILE A 710 ? ? 68.94 -115.77 29 1 ILE A 715 ? ? 65.02 99.54 30 1 PRO A 716 ? ? -78.24 -142.42 31 1 GLU A 719 ? ? -112.82 75.72 32 1 THR A 723 ? ? -99.95 -63.25 33 1 TYR A 731 ? ? 59.88 -56.36 34 1 GLN A 736 ? ? -97.55 -83.79 35 1 LEU A 738 ? ? 112.32 -54.62 36 1 ARG A 751 ? ? -80.12 34.84 37 1 LYS A 752 ? ? 48.46 14.95 38 1 ASP A 754 ? ? -75.40 -160.12 39 1 LEU A 755 ? ? 60.31 109.66 40 1 ARG A 756 ? ? 70.76 178.08 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 150 ? CG ? A GLU 150 CG 2 1 Y 1 A GLU 150 ? CD ? A GLU 150 CD 3 1 Y 1 A GLU 150 ? OE1 ? A GLU 150 OE1 4 1 Y 1 A GLU 150 ? OE2 ? A GLU 150 OE2 5 1 Y 1 A GLU 154 ? CG ? A GLU 154 CG 6 1 Y 1 A GLU 154 ? CD ? A GLU 154 CD 7 1 Y 1 A GLU 154 ? OE1 ? A GLU 154 OE1 8 1 Y 1 A GLU 154 ? OE2 ? A GLU 154 OE2 9 1 Y 1 A GLU 200 ? CG ? A GLU 200 CG 10 1 Y 1 A GLU 200 ? CD ? A GLU 200 CD 11 1 Y 1 A GLU 200 ? OE1 ? A GLU 200 OE1 12 1 Y 1 A GLU 200 ? OE2 ? A GLU 200 OE2 13 1 Y 1 A LYS 221 ? CG ? A LYS 221 CG 14 1 Y 1 A LYS 221 ? CD ? A LYS 221 CD 15 1 Y 1 A LYS 221 ? CE ? A LYS 221 CE 16 1 Y 1 A LYS 221 ? NZ ? A LYS 221 NZ 17 1 Y 1 A GLN 285 ? CG ? A GLN 285 CG 18 1 Y 1 A GLN 285 ? CD ? A GLN 285 CD 19 1 Y 1 A GLN 285 ? OE1 ? A GLN 285 OE1 20 1 Y 1 A GLN 285 ? NE2 ? A GLN 285 NE2 21 1 Y 1 A ARG 346 ? CG ? A ARG 346 CG 22 1 Y 1 A ARG 346 ? CD ? A ARG 346 CD 23 1 Y 1 A ARG 346 ? NE ? A ARG 346 NE 24 1 Y 1 A ARG 346 ? CZ ? A ARG 346 CZ 25 1 Y 1 A ARG 346 ? NH1 ? A ARG 346 NH1 26 1 Y 1 A ARG 346 ? NH2 ? A ARG 346 NH2 27 1 Y 1 A GLU 385 ? CG ? A GLU 385 CG 28 1 Y 1 A GLU 385 ? CD ? A GLU 385 CD 29 1 Y 1 A GLU 385 ? OE1 ? A GLU 385 OE1 30 1 Y 1 A GLU 385 ? OE2 ? A GLU 385 OE2 31 1 Y 1 A ARG 394 ? CG ? A ARG 394 CG 32 1 Y 1 A ARG 394 ? CD ? A ARG 394 CD 33 1 Y 1 A ARG 394 ? NE ? A ARG 394 NE 34 1 Y 1 A ARG 394 ? CZ ? A ARG 394 CZ 35 1 Y 1 A ARG 394 ? NH1 ? A ARG 394 NH1 36 1 Y 1 A ARG 394 ? NH2 ? A ARG 394 NH2 37 1 Y 1 A ARG 476 ? CG ? A ARG 476 CG 38 1 Y 1 A ARG 476 ? CD ? A ARG 476 CD 39 1 Y 1 A ARG 476 ? NE ? A ARG 476 NE 40 1 Y 1 A ARG 476 ? CZ ? A ARG 476 CZ 41 1 Y 1 A ARG 476 ? NH1 ? A ARG 476 NH1 42 1 Y 1 A ARG 476 ? NH2 ? A ARG 476 NH2 43 1 Y 1 A ILE 528 ? CG1 ? A ILE 528 CG1 44 1 Y 1 A ILE 528 ? CG2 ? A ILE 528 CG2 45 1 Y 1 A ILE 528 ? CD1 ? A ILE 528 CD1 46 1 Y 1 A LYS 531 ? CG ? A LYS 531 CG 47 1 Y 1 A LYS 531 ? CD ? A LYS 531 CD 48 1 Y 1 A LYS 531 ? CE ? A LYS 531 CE 49 1 Y 1 A LYS 531 ? NZ ? A LYS 531 NZ 50 1 Y 1 A LYS 638 ? CG ? A LYS 638 CG 51 1 Y 1 A LYS 638 ? CD ? A LYS 638 CD 52 1 Y 1 A LYS 638 ? CE ? A LYS 638 CE 53 1 Y 1 A LYS 638 ? NZ ? A LYS 638 NZ 54 1 Y 1 A ARG 668 ? CG ? A ARG 668 CG 55 1 Y 1 A ARG 668 ? CD ? A ARG 668 CD 56 1 Y 1 A ARG 668 ? NE ? A ARG 668 NE 57 1 Y 1 A ARG 668 ? CZ ? A ARG 668 CZ 58 1 Y 1 A ARG 668 ? NH1 ? A ARG 668 NH1 59 1 Y 1 A ARG 668 ? NH2 ? A ARG 668 NH2 60 1 Y 1 A LEU 704 ? CG ? A LEU 704 CG 61 1 Y 1 A LEU 704 ? CD1 ? A LEU 704 CD1 62 1 Y 1 A LEU 704 ? CD2 ? A LEU 704 CD2 63 1 Y 1 A LYS 705 ? CG ? A LYS 705 CG 64 1 Y 1 A LYS 705 ? CD ? A LYS 705 CD 65 1 Y 1 A LYS 705 ? CE ? A LYS 705 CE 66 1 Y 1 A LYS 705 ? NZ ? A LYS 705 NZ 67 1 Y 1 A ILE 710 ? CG1 ? A ILE 710 CG1 68 1 Y 1 A ILE 710 ? CG2 ? A ILE 710 CG2 69 1 Y 1 A ILE 710 ? CD1 ? A ILE 710 CD1 70 1 Y 1 A ARG 713 ? CG ? A ARG 713 CG 71 1 Y 1 A ARG 713 ? CD ? A ARG 713 CD 72 1 Y 1 A ARG 713 ? NE ? A ARG 713 NE 73 1 Y 1 A ARG 713 ? CZ ? A ARG 713 CZ 74 1 Y 1 A ARG 713 ? NH1 ? A ARG 713 NH1 75 1 Y 1 A ARG 713 ? NH2 ? A ARG 713 NH2 76 1 Y 1 A HIS 725 ? CG ? A HIS 725 CG 77 1 Y 1 A HIS 725 ? ND1 ? A HIS 725 ND1 78 1 Y 1 A HIS 725 ? CD2 ? A HIS 725 CD2 79 1 Y 1 A HIS 725 ? CE1 ? A HIS 725 CE1 80 1 Y 1 A HIS 725 ? NE2 ? A HIS 725 NE2 81 1 Y 1 A LYS 726 ? CG ? A LYS 726 CG 82 1 Y 1 A LYS 726 ? CD ? A LYS 726 CD 83 1 Y 1 A LYS 726 ? CE ? A LYS 726 CE 84 1 Y 1 A LYS 726 ? NZ ? A LYS 726 NZ 85 1 Y 1 A TYR 727 ? CG ? A TYR 727 CG 86 1 Y 1 A TYR 727 ? CD1 ? A TYR 727 CD1 87 1 Y 1 A TYR 727 ? CD2 ? A TYR 727 CD2 88 1 Y 1 A TYR 727 ? CE1 ? A TYR 727 CE1 89 1 Y 1 A TYR 727 ? CE2 ? A TYR 727 CE2 90 1 Y 1 A TYR 727 ? CZ ? A TYR 727 CZ 91 1 Y 1 A TYR 727 ? OH ? A TYR 727 OH 92 1 Y 1 A ASP 728 ? CG ? A ASP 728 CG 93 1 Y 1 A ASP 728 ? OD1 ? A ASP 728 OD1 94 1 Y 1 A ASP 728 ? OD2 ? A ASP 728 OD2 95 1 Y 1 A GLN 736 ? CG ? A GLN 736 CG 96 1 Y 1 A GLN 736 ? CD ? A GLN 736 CD 97 1 Y 1 A GLN 736 ? OE1 ? A GLN 736 OE1 98 1 Y 1 A GLN 736 ? NE2 ? A GLN 736 NE2 99 1 Y 1 A ARG 751 ? CG ? A ARG 751 CG 100 1 Y 1 A ARG 751 ? CD ? A ARG 751 CD 101 1 Y 1 A ARG 751 ? NE ? A ARG 751 NE 102 1 Y 1 A ARG 751 ? CZ ? A ARG 751 CZ 103 1 Y 1 A ARG 751 ? NH1 ? A ARG 751 NH1 104 1 Y 1 A ARG 751 ? NH2 ? A ARG 751 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 658 ? A GLU 658 2 1 Y 1 A ARG 689 ? A ARG 689 3 1 Y 1 A THR 760 ? A THR 760 4 1 Y 1 A ARG 761 ? A ARG 761 5 1 Y 1 A GLN 762 ? A GLN 762 6 1 Y 1 A VAL 763 ? A VAL 763 7 1 Y 1 A GLY 764 ? A GLY 764 8 1 Y 1 A LEU 765 ? A LEU 765 9 1 Y 1 A SER 766 ? A SER 766 10 1 Y 1 A ALA 767 ? A ALA 767 11 1 Y 1 A TRP 768 ? A TRP 768 12 1 Y 1 A LEU 769 ? A LEU 769 13 1 Y 1 A LYS 770 ? A LYS 770 14 1 Y 1 A PRO 771 ? A PRO 771 15 1 Y 1 A LYS 772 ? A LYS 772 16 1 Y 1 A GLY 773 ? A GLY 773 17 1 Y 1 A THR 774 ? A THR 774 18 1 Y 1 T DA 1 ? B DA 1 19 1 Y 1 T DA 2 ? B DA 2 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5VU8 'double helix' 5VU8 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 6 1_555 C DG 11 1_555 0.548 -0.465 0.194 -12.395 8.368 4.839 1 T_DC6:DG11_P T 6 ? P 11 ? 19 1 1 B DG 7 1_555 C DC 10 1_555 0.219 -0.089 -0.245 -8.262 -5.838 6.681 2 T_DG7:DC10_P T 7 ? P 10 ? 19 1 1 B DC 8 1_555 C DG 9 1_555 -0.074 0.940 0.649 -11.417 -8.149 25.954 3 T_DC8:DG9_P T 8 ? P 9 ? ? 1 1 B DA 9 1_555 C DT 8 1_555 1.050 -0.208 -0.295 12.854 -2.334 -2.286 4 T_DA9:DT8_P T 9 ? P 8 ? 20 1 1 B DG 10 1_555 C DC 7 1_555 -0.095 -0.298 1.190 8.051 4.134 10.399 5 T_DG10:DC7_P T 10 ? P 7 ? 19 1 1 B DT 11 1_555 C DA 6 1_555 -0.540 -0.412 0.415 6.180 -20.716 -0.975 6 T_DT11:DA6_P T 11 ? P 6 ? 20 1 1 B DT 12 1_555 C DA 5 1_555 0.682 -0.426 0.416 1.218 -15.606 -1.074 7 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 B DC 13 1_555 C DG 4 1_555 0.346 -0.028 -0.264 20.634 -9.770 6.291 8 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 B DC 15 1_555 C DG 2 1_555 -0.998 1.108 -1.466 18.676 -42.087 -49.397 9 T_DC15:DG2_P T 15 ? P 2 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 6 1_555 C DG 11 1_555 B DG 7 1_555 C DC 10 1_555 -0.417 -0.654 3.479 4.250 -6.934 35.888 -0.020 1.283 3.471 -11.079 -6.790 36.769 1 TT_DC6DG7:DC10DG11_PP T 6 ? P 11 ? T 7 ? P 10 ? 1 B DG 7 1_555 C DC 10 1_555 B DC 8 1_555 C DG 9 1_555 1.297 -1.113 3.282 -3.717 3.475 29.268 -2.872 -3.281 2.950 6.812 7.286 29.697 2 TT_DG7DC8:DG9DC10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 B DC 8 1_555 C DG 9 1_555 B DA 9 1_555 C DT 8 1_555 -1.941 0.944 2.978 6.559 0.132 33.195 1.605 4.242 2.562 0.229 -11.343 33.819 3 TT_DC8DA9:DT8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 B DA 9 1_555 C DT 8 1_555 B DG 10 1_555 C DC 7 1_555 1.033 -1.502 3.404 -14.843 8.355 24.019 -4.559 -4.875 1.859 17.533 31.146 29.373 4 TT_DA9DG10:DC7DT8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 B DG 10 1_555 C DC 7 1_555 B DT 11 1_555 C DA 6 1_555 -1.070 -0.709 3.533 9.595 -2.630 34.032 -0.760 3.235 3.169 -4.378 -15.975 35.415 5 TT_DG10DT11:DA6DC7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 B DT 11 1_555 C DA 6 1_555 B DT 12 1_555 C DA 5 1_555 0.382 -0.319 3.342 1.396 3.136 38.543 -0.873 -0.402 3.318 4.739 -2.109 38.690 6 TT_DT11DT12:DA5DA6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 B DT 12 1_555 C DA 5 1_555 B DC 13 1_555 C DG 4 1_555 1.103 0.339 2.729 12.053 5.085 32.118 -0.139 -0.174 2.960 8.752 -20.742 34.615 7 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 B DC 13 1_555 C DG 4 1_555 B DC 15 1_555 C DG 2 1_555 -1.416 0.893 6.230 7.057 0.978 57.702 0.822 2.162 6.047 1.009 -7.282 58.103 8 TT_DC13DC15:DG2DG4_PP T 13 ? P 4 ? T 15 ? P 2 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '[(3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-3-yl] [oxidanyl(phosphonooxy)phosphoryl] hydrogen phosphate' 9O7 5 'MAGNESIUM ION' MG 6 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #