HEADER TRANSFERASE 18-MAY-17 5VUA TITLE PIM1 KINASE IN COMPLEX WITH A BENZOFURANONE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PIM-1; COMPND 3 CHAIN: B; COMPND 4 FRAGMENT: UNP RESIDUES 120-404; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PIM1; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE GATEWAY CLONING VECTOR C-TERM 8XHIS SOURCE 7 PCELLFREE_G02; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 1508202 KEYWDS PIM1 KINASE, KINASE INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.J.PARKER REVDAT 3 20-MAR-24 5VUA 1 REMARK REVDAT 2 17-JAN-18 5VUA 1 JRNL REVDAT 1 13-DEC-17 5VUA 0 JRNL AUTH C.WATANABE,H.WATANABE,K.FUKUZAWA,L.J.PARKER,Y.OKIYAMA, JRNL AUTH 2 H.YUKI,S.YOKOYAMA,H.NAKANO,S.TANAKA,T.HONMA JRNL TITL THEORETICAL ANALYSIS OF ACTIVITY CLIFFS AMONG JRNL TITL 2 BENZOFURANONE-CLASS PIM1 INHIBITORS USING THE FRAGMENT JRNL TITL 3 MOLECULAR ORBITAL METHOD WITH MOLECULAR MECHANICS JRNL TITL 4 POISSON-BOLTZMANN SURFACE AREA (FMO+MM-PBSA) APPROACH JRNL REF J CHEM INF MODEL V. 57 2996 2017 JRNL REFN ESSN 1549-960X JRNL PMID 29111719 JRNL DOI 10.1021/ACS.JCIM.7B00110 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 22463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1272 - 4.3967 1.00 2728 133 0.1653 0.1733 REMARK 3 2 4.3967 - 3.4912 1.00 2672 139 0.1410 0.1616 REMARK 3 3 3.4912 - 3.0503 1.00 2667 149 0.1668 0.2040 REMARK 3 4 3.0503 - 2.7715 1.00 2641 152 0.1685 0.2199 REMARK 3 5 2.7715 - 2.5730 1.00 2670 124 0.1796 0.2121 REMARK 3 6 2.5730 - 2.4213 1.00 2663 145 0.1808 0.2395 REMARK 3 7 2.4213 - 2.3001 1.00 2635 134 0.1779 0.2250 REMARK 3 8 2.3001 - 2.2000 1.00 2665 146 0.2027 0.2429 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.100 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2317 REMARK 3 ANGLE : 0.861 3154 REMARK 3 CHIRALITY : 0.063 333 REMARK 3 PLANARITY : 0.004 406 REMARK 3 DIHEDRAL : 15.017 862 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VUA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JUL-17. REMARK 100 THE DEPOSITION ID IS D_1000227865. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL26B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.2.25 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22490 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 32.125 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : 0.07700 REMARK 200 FOR THE DATA SET : 17.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : 0.38000 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM CITRATE BUFFER, PH 5.5, 200MM REMARK 280 NACL, 1M NH4HPO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.67333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.83667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 40.25500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.41833 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 67.09167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 28 REMARK 465 LYS B 29 REMARK 465 GLU B 30 REMARK 465 LYS B 31 REMARK 465 GLU B 32 REMARK 465 PRO B 33 REMARK 465 LEU B 34 REMARK 465 GLU B 35 REMARK 465 SER B 306 REMARK 465 LEU B 307 REMARK 465 SER B 308 REMARK 465 PRO B 309 REMARK 465 GLY B 310 REMARK 465 PRO B 311 REMARK 465 SER B 312 REMARK 465 LYS B 313 REMARK 465 SER B 314 REMARK 465 GLY B 315 REMARK 465 PRO B 316 REMARK 465 SER B 317 REMARK 465 SER B 318 REMARK 465 GLY B 319 REMARK 465 GLU B 320 REMARK 465 ASN B 321 REMARK 465 LEU B 322 REMARK 465 TYR B 323 REMARK 465 PHE B 324 REMARK 465 GLN B 325 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN B 39 CG CD OE1 NE2 REMARK 470 ARG B 258 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 89 O HOH B 501 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 60 4.14 -152.57 REMARK 500 PRO B 81 -70.70 -45.40 REMARK 500 ASN B 82 -8.55 -30.84 REMARK 500 ASP B 167 43.79 -145.45 REMARK 500 ASP B 186 85.46 65.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 713 DISTANCE = 6.83 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8GX B 403 DBREF 5VUA B 29 313 UNP P11309 PIM1_HUMAN 120 404 SEQADV 5VUA MET B 28 UNP P11309 EXPRESSION TAG SEQADV 5VUA SER B 314 UNP P11309 EXPRESSION TAG SEQADV 5VUA GLY B 315 UNP P11309 EXPRESSION TAG SEQADV 5VUA PRO B 316 UNP P11309 EXPRESSION TAG SEQADV 5VUA SER B 317 UNP P11309 EXPRESSION TAG SEQADV 5VUA SER B 318 UNP P11309 EXPRESSION TAG SEQADV 5VUA GLY B 319 UNP P11309 EXPRESSION TAG SEQADV 5VUA GLU B 320 UNP P11309 EXPRESSION TAG SEQADV 5VUA ASN B 321 UNP P11309 EXPRESSION TAG SEQADV 5VUA LEU B 322 UNP P11309 EXPRESSION TAG SEQADV 5VUA TYR B 323 UNP P11309 EXPRESSION TAG SEQADV 5VUA PHE B 324 UNP P11309 EXPRESSION TAG SEQADV 5VUA GLN B 325 UNP P11309 EXPRESSION TAG SEQRES 1 B 298 MET LYS GLU LYS GLU PRO LEU GLU SER GLN TYR GLN VAL SEQRES 2 B 298 GLY PRO LEU LEU GLY SER GLY GLY PHE GLY SER VAL TYR SEQRES 3 B 298 SER GLY ILE ARG VAL SER ASP ASN LEU PRO VAL ALA ILE SEQRES 4 B 298 LYS HIS VAL GLU LYS ASP ARG ILE SER ASP TRP GLY GLU SEQRES 5 B 298 LEU PRO ASN GLY THR ARG VAL PRO MET GLU VAL VAL LEU SEQRES 6 B 298 LEU LYS LYS VAL SER SER GLY PHE SER GLY VAL ILE ARG SEQRES 7 B 298 LEU LEU ASP TRP PHE GLU ARG PRO ASP SER PHE VAL LEU SEQRES 8 B 298 ILE LEU GLU ARG PRO GLU PRO VAL GLN ASP LEU PHE ASP SEQRES 9 B 298 PHE ILE THR GLU ARG GLY ALA LEU GLN GLU GLU LEU ALA SEQRES 10 B 298 ARG SER PHE PHE TRP GLN VAL LEU GLU ALA VAL ARG HIS SEQRES 11 B 298 CYS HIS ASN CYS GLY VAL LEU HIS ARG ASP ILE LYS ASP SEQRES 12 B 298 GLU ASN ILE LEU ILE ASP LEU ASN ARG GLY GLU LEU LYS SEQRES 13 B 298 LEU ILE ASP PHE GLY SER GLY ALA LEU LEU LYS ASP THR SEQRES 14 B 298 VAL TYR THR ASP PHE ASP GLY THR ARG VAL TYR SER PRO SEQRES 15 B 298 PRO GLU TRP ILE ARG TYR HIS ARG TYR HIS GLY ARG SER SEQRES 16 B 298 ALA ALA VAL TRP SER LEU GLY ILE LEU LEU TYR ASP MET SEQRES 17 B 298 VAL CYS GLY ASP ILE PRO PHE GLU HIS ASP GLU GLU ILE SEQRES 18 B 298 ILE ARG GLY GLN VAL PHE PHE ARG GLN ARG VAL SER SER SEQRES 19 B 298 GLU CYS GLN HIS LEU ILE ARG TRP CYS LEU ALA LEU ARG SEQRES 20 B 298 PRO SER ASP ARG PRO THR PHE GLU GLU ILE GLN ASN HIS SEQRES 21 B 298 PRO TRP MET GLN ASP VAL LEU LEU PRO GLN GLU THR ALA SEQRES 22 B 298 GLU ILE HIS LEU HIS SER LEU SER PRO GLY PRO SER LYS SEQRES 23 B 298 SER GLY PRO SER SER GLY GLU ASN LEU TYR PHE GLN HET GOL B 401 6 HET PO4 B 402 5 HET 8GX B 403 29 HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETNAM 8GX (2Z)-6-METHOXY-7-(PIPERAZIN-1-YLMETHYL)-2-(1H- HETNAM 2 8GX PYRROLO[2,3-C]PYRIDIN-3-YLMETHYLIDENE)-1-BENZOFURAN-3- HETNAM 3 8GX ONE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 PO4 O4 P 3- FORMUL 4 8GX C22 H22 N4 O3 FORMUL 5 HOH *213(H2 O) HELIX 1 AA1 ASP B 72 ILE B 74 5 3 HELIX 2 AA2 MET B 88 SER B 97 1 10 HELIX 3 AA3 LEU B 129 GLY B 137 1 9 HELIX 4 AA4 GLN B 140 CYS B 161 1 22 HELIX 5 AA5 LYS B 169 GLU B 171 5 3 HELIX 6 AA6 THR B 204 SER B 208 5 5 HELIX 7 AA7 PRO B 209 HIS B 216 1 8 HELIX 8 AA8 HIS B 219 GLY B 238 1 20 HELIX 9 AA9 HIS B 244 GLY B 251 1 8 HELIX 10 AB1 SER B 260 LEU B 271 1 12 HELIX 11 AB2 ARG B 274 ARG B 278 5 5 HELIX 12 AB3 THR B 280 ASN B 286 1 7 HELIX 13 AB4 HIS B 287 GLN B 291 5 5 HELIX 14 AB5 LEU B 295 LEU B 304 1 10 SHEET 1 AA1 5 TYR B 38 SER B 46 0 SHEET 2 AA1 5 GLY B 50 ARG B 57 -1 O VAL B 52 N LEU B 44 SHEET 3 AA1 5 PRO B 63 GLU B 70 -1 O HIS B 68 N SER B 51 SHEET 4 AA1 5 SER B 115 GLU B 121 -1 O LEU B 120 N ALA B 65 SHEET 5 AA1 5 LEU B 106 GLU B 111 -1 N ASP B 108 O ILE B 119 SHEET 1 AA2 2 TRP B 77 GLU B 79 0 SHEET 2 AA2 2 ARG B 85 PRO B 87 -1 O VAL B 86 N GLY B 78 SHEET 1 AA3 3 VAL B 126 ASP B 128 0 SHEET 2 AA3 3 ILE B 173 ASP B 176 -1 O ILE B 175 N GLN B 127 SHEET 3 AA3 3 GLU B 181 LEU B 184 -1 O GLU B 181 N ASP B 176 SHEET 1 AA4 2 VAL B 163 LEU B 164 0 SHEET 2 AA4 2 ALA B 191 LEU B 192 -1 O ALA B 191 N LEU B 164 CISPEP 1 GLU B 124 PRO B 125 0 -2.23 SITE 1 AC1 6 PHE B 130 ILE B 133 ASP B 170 ASP B 234 SITE 2 AC1 6 GLY B 238 ASP B 239 SITE 1 AC2 5 ARG B 156 ASN B 160 SER B 260 SER B 261 SITE 2 AC2 5 HOH B 525 SITE 1 AC3 16 SER B 46 PHE B 49 VAL B 52 ALA B 65 SITE 2 AC3 16 LYS B 67 ILE B 104 LEU B 120 GLU B 121 SITE 3 AC3 16 ASP B 128 GLU B 171 LEU B 174 ILE B 185 SITE 4 AC3 16 ASP B 186 HOH B 580 HOH B 596 HOH B 617 CRYST1 98.140 98.140 80.510 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010190 0.005883 0.000000 0.00000 SCALE2 0.000000 0.011766 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012421 0.00000