HEADER OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 19-MAY-17 5VV9 TITLE STRUCTURE OF BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN IN TITLE 2 COMPLEX WITH 4-(2-(((2-AMINO-4-METHYLQUINOLIN-7-YL)METHYL)AMINO) TITLE 3 ETHYL)BENZONITRILE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NITRIC OXIDE SYNTHASE, ENDOTHELIAL; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 40-482; COMPND 5 SYNONYM: ENDOTHELIAL NITRIC OXIDE SYNTHASE, CONSTITUTIVE NOS, CNOS, COMPND 6 EC-NOS, ENDOTHELIAL NOS, ENOS, NOS TYPE III, NOSIII; COMPND 7 EC: 1.14.13.39; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 CELL: ENDOTHELIAL; SOURCE 6 GENE: NOS3; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCWORI KEYWDS NITRIC OXIDE SYNTHASE, INHIBITOR COMPLEX, HEME ENZYME, KEYWDS 2 OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.LI,T.L.POULOS REVDAT 4 04-OCT-23 5VV9 1 REMARK REVDAT 3 25-DEC-19 5VV9 1 REMARK REVDAT 2 06-SEP-17 5VV9 1 JRNL REVDAT 1 16-AUG-17 5VV9 0 JRNL AUTH A.V.PENSA,M.A.CINELLI,H.LI,G.CHREIFI,P.MUKHERJEE,L.J.ROMAN, JRNL AUTH 2 P.MARTASEK,T.L.POULOS,R.B.SILVERMAN JRNL TITL HYDROPHILIC, POTENT, AND SELECTIVE 7-SUBSTITUTED JRNL TITL 2 2-AMINOQUINOLINES AS IMPROVED HUMAN NEURONAL NITRIC OXIDE JRNL TITL 3 SYNTHASE INHIBITORS. JRNL REF J. MED. CHEM. V. 60 7146 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28776992 JRNL DOI 10.1021/ACS.JMEDCHEM.7B00835 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.050 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 32952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 3077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.9206 - 6.9919 1.00 2732 143 0.1286 0.2086 REMARK 3 2 6.9919 - 5.5549 1.00 2732 150 0.1437 0.1702 REMARK 3 3 5.5549 - 4.8542 1.00 2740 140 0.1278 0.1996 REMARK 3 4 4.8542 - 4.4111 1.00 2725 144 0.1107 0.1871 REMARK 3 5 4.4111 - 4.0953 1.00 2733 142 0.1256 0.2051 REMARK 3 6 4.0953 - 3.8540 1.00 2764 146 0.1466 0.2421 REMARK 3 7 3.8540 - 3.6612 1.00 2742 145 0.1574 0.2640 REMARK 3 8 3.6612 - 3.5019 1.00 2734 146 0.1599 0.1829 REMARK 3 9 3.5019 - 3.3672 1.00 2728 143 0.1843 0.2791 REMARK 3 10 3.3672 - 3.2510 1.00 2764 143 0.2273 0.3210 REMARK 3 11 3.2510 - 3.1494 1.00 2712 146 0.2481 0.3098 REMARK 3 12 3.1494 - 3.0594 1.00 2731 147 0.2643 0.3511 REMARK 3 13 3.0594 - 2.9789 1.00 2757 148 0.2778 0.3826 REMARK 3 14 2.9789 - 2.9063 1.00 2727 138 0.3014 0.3788 REMARK 3 15 2.9063 - 2.8402 1.00 2733 146 0.3389 0.3916 REMARK 3 16 2.8402 - 2.7798 0.99 2728 143 0.3536 0.4151 REMARK 3 17 2.7798 - 2.7242 0.99 2663 135 0.3620 0.4365 REMARK 3 18 2.7242 - 2.6728 0.99 2767 149 0.3699 0.4037 REMARK 3 19 2.6728 - 2.6251 0.97 2629 126 0.3913 0.3727 REMARK 3 20 2.6251 - 2.5806 0.95 2613 138 0.3839 0.4101 REMARK 3 21 2.5806 - 2.5390 0.92 2542 134 0.4091 0.4337 REMARK 3 22 2.5390 - 2.4999 0.70 1908 85 0.4343 0.5061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.530 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 6827 REMARK 3 ANGLE : 1.337 9324 REMARK 3 CHIRALITY : 0.049 970 REMARK 3 PLANARITY : 0.006 1198 REMARK 3 DIHEDRAL : 16.942 2458 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 67:482) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1856 10.5917 31.7614 REMARK 3 T TENSOR REMARK 3 T11: 0.5526 T22: 0.4845 REMARK 3 T33: 0.5113 T12: -0.0505 REMARK 3 T13: -0.0012 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.9226 L22: 1.4614 REMARK 3 L33: 1.8702 L12: -0.3941 REMARK 3 L13: -0.6199 L23: 0.1091 REMARK 3 S TENSOR REMARK 3 S11: 0.0121 S12: 0.0420 S13: -0.0070 REMARK 3 S21: -0.2156 S22: 0.0215 S23: -0.1573 REMARK 3 S31: -0.0368 S32: 0.0577 S33: -0.0247 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESID 69:482) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3342 5.7104 67.4251 REMARK 3 T TENSOR REMARK 3 T11: 0.5780 T22: 0.5017 REMARK 3 T33: 0.5004 T12: -0.0160 REMARK 3 T13: -0.0004 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 0.7970 L22: 1.2133 REMARK 3 L33: 2.5962 L12: -0.3476 REMARK 3 L13: 0.3763 L23: -1.0159 REMARK 3 S TENSOR REMARK 3 S11: -0.0095 S12: -0.0693 S13: -0.0268 REMARK 3 S21: 0.1003 S22: 0.0533 S23: 0.0410 REMARK 3 S31: -0.1075 S32: -0.0684 S33: -0.0311 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000224203. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS OCT. 15, 2015 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.8 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33655 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : 0.13200 REMARK 200 FOR THE DATA SET : 8.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 2.33000 REMARK 200 R SYM FOR SHELL (I) : 2.33000 REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.8.0049 REMARK 200 STARTING MODEL: PDB ENTRY 1NSE REMARK 200 REMARK 200 REMARK: CUBE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-24% PEG3350, 0.1 M CACODYLATE, 140 REMARK 280 -200 MM MAGNESIUM ACETATE, 5 MM TCEP, PH 6.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.62250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 77.91600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.06350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 77.91600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.62250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.06350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -117.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 40 REMARK 465 ALA A 41 REMARK 465 PRO A 42 REMARK 465 ALA A 43 REMARK 465 PRO A 44 REMARK 465 ALA A 45 REMARK 465 THR A 46 REMARK 465 PRO A 47 REMARK 465 HIS A 48 REMARK 465 ALA A 49 REMARK 465 PRO A 50 REMARK 465 ASP A 51 REMARK 465 HIS A 52 REMARK 465 SER A 53 REMARK 465 PRO A 54 REMARK 465 ALA A 55 REMARK 465 PRO A 56 REMARK 465 ASN A 57 REMARK 465 SER A 58 REMARK 465 PRO A 59 REMARK 465 THR A 60 REMARK 465 LEU A 61 REMARK 465 THR A 62 REMARK 465 ARG A 63 REMARK 465 PRO A 64 REMARK 465 PRO A 65 REMARK 465 GLU A 66 REMARK 465 LYS A 110 REMARK 465 LEU A 111 REMARK 465 GLN A 112 REMARK 465 THR A 113 REMARK 465 ARG A 114 REMARK 465 PRO A 115 REMARK 465 SER A 116 REMARK 465 PRO A 117 REMARK 465 GLY A 118 REMARK 465 PRO A 119 REMARK 465 PRO A 120 REMARK 465 ARG B 40 REMARK 465 ALA B 41 REMARK 465 PRO B 42 REMARK 465 ALA B 43 REMARK 465 PRO B 44 REMARK 465 ALA B 45 REMARK 465 THR B 46 REMARK 465 PRO B 47 REMARK 465 HIS B 48 REMARK 465 ALA B 49 REMARK 465 PRO B 50 REMARK 465 ASP B 51 REMARK 465 HIS B 52 REMARK 465 SER B 53 REMARK 465 PRO B 54 REMARK 465 ALA B 55 REMARK 465 PRO B 56 REMARK 465 ASN B 57 REMARK 465 SER B 58 REMARK 465 PRO B 59 REMARK 465 THR B 60 REMARK 465 LEU B 61 REMARK 465 THR B 62 REMARK 465 ARG B 63 REMARK 465 PRO B 64 REMARK 465 PRO B 65 REMARK 465 GLU B 66 REMARK 465 GLY B 67 REMARK 465 PRO B 68 REMARK 465 LEU B 111 REMARK 465 GLN B 112 REMARK 465 THR B 113 REMARK 465 ARG B 114 REMARK 465 PRO B 115 REMARK 465 SER B 116 REMARK 465 PRO B 117 REMARK 465 GLY B 118 REMARK 465 PRO B 119 REMARK 465 PRO B 120 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR B 256 OD2 ASP B 289 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 69 44.06 -84.73 REMARK 500 CYS A 87 -18.89 -49.46 REMARK 500 LEU A 102 43.00 -100.54 REMARK 500 GLU A 123 -71.12 -32.82 REMARK 500 ASN A 225 78.07 -101.27 REMARK 500 SER A 262 -173.82 -66.75 REMARK 500 ASN A 285 40.38 -157.32 REMARK 500 ALA A 353 60.93 -167.46 REMARK 500 ARG A 374 -138.70 -118.24 REMARK 500 PRO B 108 -176.62 -68.08 REMARK 500 ALA B 122 -22.72 -140.05 REMARK 500 LYS B 141 35.12 70.03 REMARK 500 ARG B 142 29.40 -142.95 REMARK 500 ASP B 202 44.76 -98.52 REMARK 500 GLN B 259 -14.34 -46.66 REMARK 500 ASP B 260 30.02 -76.78 REMARK 500 SER B 262 174.74 -57.19 REMARK 500 HIS B 279 32.17 -90.41 REMARK 500 ASN B 285 40.47 -144.18 REMARK 500 ARG B 331 146.66 179.57 REMARK 500 ALA B 353 67.18 -163.61 REMARK 500 THR B 366 -68.07 -94.18 REMARK 500 ARG B 367 -71.28 -61.25 REMARK 500 ARG B 374 -139.85 -115.12 REMARK 500 PRO B 481 49.31 -78.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 96 SG REMARK 620 2 CYS A 101 SG 108.5 REMARK 620 3 CYS B 96 SG 114.2 100.6 REMARK 620 4 CYS B 101 SG 102.8 119.4 111.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 186 SG REMARK 620 2 HEM A 501 NA 103.7 REMARK 620 3 HEM A 501 NB 100.9 89.9 REMARK 620 4 HEM A 501 NC 93.8 162.3 88.8 REMARK 620 5 HEM A 501 ND 98.1 88.8 160.7 86.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM B 501 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 186 SG REMARK 620 2 HEM B 501 NA 104.1 REMARK 620 3 HEM B 501 NB 99.3 89.1 REMARK 620 4 HEM B 501 NC 85.9 169.6 86.1 REMARK 620 5 HEM B 501 ND 92.4 90.5 168.0 92.3 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H4B A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9OG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue H4B B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9OG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 505 DBREF 5VV9 A 40 482 UNP P29473 NOS3_BOVIN 40 482 DBREF 5VV9 B 40 482 UNP P29473 NOS3_BOVIN 40 482 SEQADV 5VV9 ARG A 100 UNP P29473 CYS 100 CONFLICT SEQADV 5VV9 ARG B 100 UNP P29473 CYS 100 CONFLICT SEQRES 1 A 443 ARG ALA PRO ALA PRO ALA THR PRO HIS ALA PRO ASP HIS SEQRES 2 A 443 SER PRO ALA PRO ASN SER PRO THR LEU THR ARG PRO PRO SEQRES 3 A 443 GLU GLY PRO LYS PHE PRO ARG VAL LYS ASN TRP GLU LEU SEQRES 4 A 443 GLY SER ILE THR TYR ASP THR LEU CYS ALA GLN SER GLN SEQRES 5 A 443 GLN ASP GLY PRO CYS THR PRO ARG ARG CYS LEU GLY SER SEQRES 6 A 443 LEU VAL LEU PRO ARG LYS LEU GLN THR ARG PRO SER PRO SEQRES 7 A 443 GLY PRO PRO PRO ALA GLU GLN LEU LEU SER GLN ALA ARG SEQRES 8 A 443 ASP PHE ILE ASN GLN TYR TYR SER SER ILE LYS ARG SER SEQRES 9 A 443 GLY SER GLN ALA HIS GLU GLU ARG LEU GLN GLU VAL GLU SEQRES 10 A 443 ALA GLU VAL ALA SER THR GLY THR TYR HIS LEU ARG GLU SEQRES 11 A 443 SER GLU LEU VAL PHE GLY ALA LYS GLN ALA TRP ARG ASN SEQRES 12 A 443 ALA PRO ARG CYS VAL GLY ARG ILE GLN TRP GLY LYS LEU SEQRES 13 A 443 GLN VAL PHE ASP ALA ARG ASP CYS SER SER ALA GLN GLU SEQRES 14 A 443 MET PHE THR TYR ILE CYS ASN HIS ILE LYS TYR ALA THR SEQRES 15 A 443 ASN ARG GLY ASN LEU ARG SER ALA ILE THR VAL PHE PRO SEQRES 16 A 443 GLN ARG ALA PRO GLY ARG GLY ASP PHE ARG ILE TRP ASN SEQRES 17 A 443 SER GLN LEU VAL ARG TYR ALA GLY TYR ARG GLN GLN ASP SEQRES 18 A 443 GLY SER VAL ARG GLY ASP PRO ALA ASN VAL GLU ILE THR SEQRES 19 A 443 GLU LEU CYS ILE GLN HIS GLY TRP THR PRO GLY ASN GLY SEQRES 20 A 443 ARG PHE ASP VAL LEU PRO LEU LEU LEU GLN ALA PRO ASP SEQRES 21 A 443 GLU ALA PRO GLU LEU PHE VAL LEU PRO PRO GLU LEU VAL SEQRES 22 A 443 LEU GLU VAL PRO LEU GLU HIS PRO THR LEU GLU TRP PHE SEQRES 23 A 443 ALA ALA LEU GLY LEU ARG TRP TYR ALA LEU PRO ALA VAL SEQRES 24 A 443 SER ASN MET LEU LEU GLU ILE GLY GLY LEU GLU PHE SER SEQRES 25 A 443 ALA ALA PRO PHE SER GLY TRP TYR MET SER THR GLU ILE SEQRES 26 A 443 GLY THR ARG ASN LEU CYS ASP PRO HIS ARG TYR ASN ILE SEQRES 27 A 443 LEU GLU ASP VAL ALA VAL CAS MET ASP LEU ASP THR ARG SEQRES 28 A 443 THR THR SER SER LEU TRP LYS ASP LYS ALA ALA VAL GLU SEQRES 29 A 443 ILE ASN LEU ALA VAL LEU HIS SER PHE GLN LEU ALA LYS SEQRES 30 A 443 VAL THR ILE VAL ASP HIS HIS ALA ALA THR VAL SER PHE SEQRES 31 A 443 MET LYS HIS LEU ASP ASN GLU GLN LYS ALA ARG GLY GLY SEQRES 32 A 443 CYS PRO ALA ASP TRP ALA TRP ILE VAL PRO PRO ILE SER SEQRES 33 A 443 GLY SER LEU THR PRO VAL PHE HIS GLN GLU MET VAL ASN SEQRES 34 A 443 TYR ILE LEU SER PRO ALA PHE ARG TYR GLN PRO ASP PRO SEQRES 35 A 443 TRP SEQRES 1 B 443 ARG ALA PRO ALA PRO ALA THR PRO HIS ALA PRO ASP HIS SEQRES 2 B 443 SER PRO ALA PRO ASN SER PRO THR LEU THR ARG PRO PRO SEQRES 3 B 443 GLU GLY PRO LYS PHE PRO ARG VAL LYS ASN TRP GLU LEU SEQRES 4 B 443 GLY SER ILE THR TYR ASP THR LEU CYS ALA GLN SER GLN SEQRES 5 B 443 GLN ASP GLY PRO CYS THR PRO ARG ARG CYS LEU GLY SER SEQRES 6 B 443 LEU VAL LEU PRO ARG LYS LEU GLN THR ARG PRO SER PRO SEQRES 7 B 443 GLY PRO PRO PRO ALA GLU GLN LEU LEU SER GLN ALA ARG SEQRES 8 B 443 ASP PHE ILE ASN GLN TYR TYR SER SER ILE LYS ARG SER SEQRES 9 B 443 GLY SER GLN ALA HIS GLU GLU ARG LEU GLN GLU VAL GLU SEQRES 10 B 443 ALA GLU VAL ALA SER THR GLY THR TYR HIS LEU ARG GLU SEQRES 11 B 443 SER GLU LEU VAL PHE GLY ALA LYS GLN ALA TRP ARG ASN SEQRES 12 B 443 ALA PRO ARG CYS VAL GLY ARG ILE GLN TRP GLY LYS LEU SEQRES 13 B 443 GLN VAL PHE ASP ALA ARG ASP CYS SER SER ALA GLN GLU SEQRES 14 B 443 MET PHE THR TYR ILE CYS ASN HIS ILE LYS TYR ALA THR SEQRES 15 B 443 ASN ARG GLY ASN LEU ARG SER ALA ILE THR VAL PHE PRO SEQRES 16 B 443 GLN ARG ALA PRO GLY ARG GLY ASP PHE ARG ILE TRP ASN SEQRES 17 B 443 SER GLN LEU VAL ARG TYR ALA GLY TYR ARG GLN GLN ASP SEQRES 18 B 443 GLY SER VAL ARG GLY ASP PRO ALA ASN VAL GLU ILE THR SEQRES 19 B 443 GLU LEU CYS ILE GLN HIS GLY TRP THR PRO GLY ASN GLY SEQRES 20 B 443 ARG PHE ASP VAL LEU PRO LEU LEU LEU GLN ALA PRO ASP SEQRES 21 B 443 GLU ALA PRO GLU LEU PHE VAL LEU PRO PRO GLU LEU VAL SEQRES 22 B 443 LEU GLU VAL PRO LEU GLU HIS PRO THR LEU GLU TRP PHE SEQRES 23 B 443 ALA ALA LEU GLY LEU ARG TRP TYR ALA LEU PRO ALA VAL SEQRES 24 B 443 SER ASN MET LEU LEU GLU ILE GLY GLY LEU GLU PHE SER SEQRES 25 B 443 ALA ALA PRO PHE SER GLY TRP TYR MET SER THR GLU ILE SEQRES 26 B 443 GLY THR ARG ASN LEU CYS ASP PRO HIS ARG TYR ASN ILE SEQRES 27 B 443 LEU GLU ASP VAL ALA VAL CAS MET ASP LEU ASP THR ARG SEQRES 28 B 443 THR THR SER SER LEU TRP LYS ASP LYS ALA ALA VAL GLU SEQRES 29 B 443 ILE ASN LEU ALA VAL LEU HIS SER PHE GLN LEU ALA LYS SEQRES 30 B 443 VAL THR ILE VAL ASP HIS HIS ALA ALA THR VAL SER PHE SEQRES 31 B 443 MET LYS HIS LEU ASP ASN GLU GLN LYS ALA ARG GLY GLY SEQRES 32 B 443 CYS PRO ALA ASP TRP ALA TRP ILE VAL PRO PRO ILE SER SEQRES 33 B 443 GLY SER LEU THR PRO VAL PHE HIS GLN GLU MET VAL ASN SEQRES 34 B 443 TYR ILE LEU SER PRO ALA PHE ARG TYR GLN PRO ASP PRO SEQRES 35 B 443 TRP MODRES 5VV9 CAS A 384 CYS MODIFIED RESIDUE MODRES 5VV9 CAS B 384 CYS MODIFIED RESIDUE HET CAS A 384 9 HET CAS B 384 9 HET HEM A 501 43 HET H4B A 502 17 HET 9OG A 503 24 HET GOL A 504 6 HET HEM B 501 43 HET H4B B 502 17 HET 9OG B 503 24 HET GOL B 504 6 HET ZN B 505 1 HETNAM CAS S-(DIMETHYLARSENIC)CYSTEINE HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM H4B 5,6,7,8-TETRAHYDROBIOPTERIN HETNAM 9OG 4-(2-{[(2-AMINO-4-METHYLQUINOLIN-7-YL) HETNAM 2 9OG METHYL]AMINO}ETHYL)BENZONITRILE HETNAM GOL GLYCEROL HETNAM ZN ZINC ION HETSYN HEM HEME HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CAS 2(C5 H12 AS N O2 S) FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 H4B 2(C9 H15 N5 O3) FORMUL 5 9OG 2(C20 H20 N4) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 11 ZN ZN 2+ HELIX 1 AA1 THR A 85 SER A 90 5 6 HELIX 2 AA2 ALA A 122 ILE A 140 1 19 HELIX 3 AA3 SER A 145 GLY A 163 1 19 HELIX 4 AA4 ARG A 168 ASN A 182 1 15 HELIX 5 AA5 GLY A 188 TRP A 192 5 5 HELIX 6 AA6 SER A 205 ASN A 222 1 18 HELIX 7 AA7 ARG A 223 ASN A 225 5 3 HELIX 8 AA8 ASN A 269 HIS A 279 1 11 HELIX 9 AA9 TRP A 324 GLY A 329 5 6 HELIX 10 AB1 MET A 360 THR A 366 1 7 HELIX 11 AB2 THR A 366 ASP A 371 1 6 HELIX 12 AB3 ILE A 377 MET A 385 1 9 HELIX 13 AB4 THR A 391 SER A 394 5 4 HELIX 14 AB5 LEU A 395 ALA A 415 1 21 HELIX 15 AB6 ASP A 421 GLY A 441 1 21 HELIX 16 AB7 ASP A 446 VAL A 451 1 6 HELIX 17 AB8 SER A 455 GLN A 464 5 10 HELIX 18 AB9 LEU B 86 SER B 90 5 5 HELIX 19 AC1 ALA B 122 ILE B 140 1 19 HELIX 20 AC2 SER B 145 GLY B 163 1 19 HELIX 21 AC3 ARG B 168 ALA B 183 1 16 HELIX 22 AC4 GLY B 188 TRP B 192 5 5 HELIX 23 AC5 SER B 205 ASN B 222 1 18 HELIX 24 AC6 ARG B 223 ASN B 225 5 3 HELIX 25 AC7 ASN B 269 HIS B 279 1 11 HELIX 26 AC8 LEU B 322 GLY B 329 5 8 HELIX 27 AC9 SER B 361 THR B 366 1 6 HELIX 28 AD1 THR B 366 ASP B 371 1 6 HELIX 29 AD2 ILE B 377 MET B 385 1 9 HELIX 30 AD3 THR B 391 SER B 394 5 4 HELIX 31 AD4 LEU B 395 ALA B 415 1 21 HELIX 32 AD5 ASP B 421 ARG B 440 1 20 HELIX 33 AD6 ASP B 446 VAL B 451 1 6 SHEET 1 AA1 2 ARG A 72 LYS A 74 0 SHEET 2 AA1 2 ILE A 81 TYR A 83 -1 O THR A 82 N VAL A 73 SHEET 1 AA2 4 GLN A 196 ASP A 199 0 SHEET 2 AA2 4 ALA A 229 VAL A 232 1 O ILE A 230 N PHE A 198 SHEET 3 AA2 4 PHE A 355 SER A 356 -1 O SER A 356 N ALA A 229 SHEET 4 AA2 4 ALA A 337 VAL A 338 -1 N VAL A 338 O PHE A 355 SHEET 1 AA3 3 ARG A 244 ILE A 245 0 SHEET 2 AA3 3 LEU A 293 GLN A 296 -1 O GLN A 296 N ARG A 244 SHEET 3 AA3 3 GLU A 303 PHE A 305 -1 O PHE A 305 N LEU A 293 SHEET 1 AA4 2 GLY A 255 ARG A 257 0 SHEET 2 AA4 2 VAL A 263 GLY A 265 -1 O ARG A 264 N TYR A 256 SHEET 1 AA5 2 GLU A 314 PRO A 316 0 SHEET 2 AA5 2 ARG A 331 TYR A 333 -1 O TRP A 332 N VAL A 315 SHEET 1 AA6 3 LEU A 348 PHE A 350 0 SHEET 2 AA6 3 LEU A 342 ILE A 345 -1 N LEU A 343 O PHE A 350 SHEET 3 AA6 3 ALA A 474 ARG A 476 -1 O ALA A 474 N GLU A 344 SHEET 1 AA7 2 ARG B 72 LYS B 74 0 SHEET 2 AA7 2 ILE B 81 TYR B 83 -1 O THR B 82 N VAL B 73 SHEET 1 AA8 4 GLN B 196 ASP B 199 0 SHEET 2 AA8 4 ALA B 229 VAL B 232 1 O ILE B 230 N PHE B 198 SHEET 3 AA8 4 PHE B 355 SER B 356 -1 O SER B 356 N ALA B 229 SHEET 4 AA8 4 ALA B 337 VAL B 338 -1 N VAL B 338 O PHE B 355 SHEET 1 AA9 3 ARG B 244 ILE B 245 0 SHEET 2 AA9 3 LEU B 293 GLN B 296 -1 O GLN B 296 N ARG B 244 SHEET 3 AA9 3 GLU B 303 PHE B 305 -1 O PHE B 305 N LEU B 293 SHEET 1 AB1 2 GLY B 255 ARG B 257 0 SHEET 2 AB1 2 VAL B 263 GLY B 265 -1 O ARG B 264 N TYR B 256 SHEET 1 AB2 2 GLU B 314 PRO B 316 0 SHEET 2 AB2 2 ARG B 331 TYR B 333 -1 O TRP B 332 N VAL B 315 SHEET 1 AB3 3 LEU B 348 PHE B 350 0 SHEET 2 AB3 3 LEU B 342 ILE B 345 -1 N ILE B 345 O LEU B 348 SHEET 3 AB3 3 ALA B 474 ARG B 476 -1 O ARG B 476 N LEU B 342 SHEET 1 AB4 2 TYR B 359 MET B 360 0 SHEET 2 AB4 2 ILE B 419 VAL B 420 1 O VAL B 420 N TYR B 359 LINK C VAL A 383 N CAS A 384 1555 1555 1.32 LINK C CAS A 384 N MET A 385 1555 1555 1.33 LINK C VAL B 383 N CAS B 384 1555 1555 1.33 LINK C CAS B 384 N MET B 385 1555 1555 1.33 LINK SG CYS A 96 ZN ZN B 505 1555 1555 2.40 LINK SG CYS A 101 ZN ZN B 505 1555 1555 2.57 LINK SG CYS A 186 FE HEM A 501 1555 1555 2.29 LINK SG CYS B 96 ZN ZN B 505 1555 1555 2.54 LINK SG CYS B 101 ZN ZN B 505 1555 1555 2.42 LINK SG CYS B 186 FE HEM B 501 1555 1555 2.30 CISPEP 1 SER A 472 PRO A 473 0 -12.54 CISPEP 2 SER B 472 PRO B 473 0 -5.49 SITE 1 AC1 14 TRP A 180 ARG A 185 CYS A 186 SER A 228 SITE 2 AC1 14 PHE A 355 SER A 356 TRP A 358 MET A 360 SITE 3 AC1 14 GLU A 363 TRP A 449 PHE A 475 TYR A 477 SITE 4 AC1 14 H4B A 502 9OG A 503 SITE 1 AC2 9 SER A 104 VAL A 106 ARG A 367 ALA A 448 SITE 2 AC2 9 TRP A 449 HEM A 501 GOL A 504 PHE B 462 SITE 3 AC2 9 HIS B 463 SITE 1 AC3 10 LEU A 107 VAL A 338 TRP A 358 TYR A 359 SITE 2 AC3 10 GLU A 363 TRP A 449 TYR A 477 HEM A 501 SITE 3 AC3 10 GOL A 504 TRP B 76 SITE 1 AC4 7 VAL A 106 ARG A 367 ASP A 371 HIS A 373 SITE 2 AC4 7 H4B A 502 9OG A 503 HIS B 463 SITE 1 AC5 13 TRP B 180 ALA B 183 ARG B 185 CYS B 186 SITE 2 AC5 13 SER B 228 PHE B 355 SER B 356 TRP B 358 SITE 3 AC5 13 GLU B 363 PHE B 475 TYR B 477 H4B B 502 SITE 4 AC5 13 9OG B 503 SITE 1 AC6 9 TRP A 447 PHE A 462 GLU A 465 SER B 104 SITE 2 AC6 9 ARG B 367 ALA B 448 TRP B 449 HEM B 501 SITE 3 AC6 9 GOL B 504 SITE 1 AC7 9 TRP A 76 LEU B 107 VAL B 338 TRP B 358 SITE 2 AC7 9 TYR B 359 GLU B 363 TRP B 449 TYR B 477 SITE 3 AC7 9 HEM B 501 SITE 1 AC8 3 ARG B 367 HIS B 373 H4B B 502 SITE 1 AC9 4 CYS A 96 CYS A 101 CYS B 96 CYS B 101 CRYST1 57.245 106.127 155.832 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017469 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009423 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006417 0.00000