HEADER OXIDOREDUCTASE 21-MAY-17 5VW7 TITLE NADPH SOAK OF Y316A MUTANT OF CORN ROOT FERREDOXIN:NADP+ REDUCTASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN--NADP REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.18.1.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZEA MAYS; SOURCE 3 ORGANISM_COMMON: MAIZE; SOURCE 4 ORGANISM_TAXID: 4577; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLAVOENZYME, HYDRIDE TRANSFER, PHOTOSYNTHESIS, ACTIVE SITE KEYWDS 2 COMPRESSION, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.KEAN,R.A.CARPENTER,A.R.HALL,P.A.KARPLUS REVDAT 4 04-OCT-23 5VW7 1 LINK REVDAT 3 27-NOV-19 5VW7 1 REMARK REVDAT 2 11-OCT-17 5VW7 1 JRNL REVDAT 1 23-AUG-17 5VW7 0 JRNL AUTH K.M.KEAN,R.A.CARPENTER,V.PANDINI,G.ZANETTI,A.R.HALL,R.FABER, JRNL AUTH 2 A.ALIVERTI,P.A.KARPLUS JRNL TITL HIGH-RESOLUTION STUDIES OF HYDRIDE TRANSFER IN THE JRNL TITL 2 FERREDOXIN:NADP(+) REDUCTASE SUPERFAMILY. JRNL REF FEBS J. V. 284 3302 2017 JRNL REFN ISSN 1742-4658 JRNL PMID 28783258 JRNL DOI 10.1111/FEBS.14190 REMARK 2 REMARK 2 RESOLUTION. 1.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.45 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 50752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.133 REMARK 3 R VALUE (WORKING SET) : 0.131 REMARK 3 FREE R VALUE : 0.156 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.090 REMARK 3 FREE R VALUE TEST SET COUNT : 5122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.4771 - 4.9948 0.99 1661 204 0.1923 0.2082 REMARK 3 2 4.9948 - 3.9651 1.00 1619 152 0.1150 0.1198 REMARK 3 3 3.9651 - 3.4640 1.00 1569 179 0.1130 0.1491 REMARK 3 4 3.4640 - 3.1473 1.00 1560 175 0.1212 0.1528 REMARK 3 5 3.1473 - 2.9218 1.00 1548 169 0.1252 0.1434 REMARK 3 6 2.9218 - 2.7495 1.00 1528 177 0.1263 0.1522 REMARK 3 7 2.7495 - 2.6118 1.00 1535 168 0.1187 0.1327 REMARK 3 8 2.6118 - 2.4982 1.00 1549 148 0.1220 0.1473 REMARK 3 9 2.4982 - 2.4020 1.00 1543 161 0.1247 0.1592 REMARK 3 10 2.4020 - 2.3191 1.00 1533 169 0.1298 0.1516 REMARK 3 11 2.3191 - 2.2466 1.00 1516 166 0.1258 0.1597 REMARK 3 12 2.2466 - 2.1824 1.00 1496 167 0.1228 0.1505 REMARK 3 13 2.1824 - 2.1249 1.00 1494 195 0.1234 0.1536 REMARK 3 14 2.1249 - 2.0731 1.00 1529 151 0.1318 0.1329 REMARK 3 15 2.0731 - 2.0259 1.00 1513 187 0.1266 0.1477 REMARK 3 16 2.0259 - 1.9828 1.00 1502 148 0.1250 0.1482 REMARK 3 17 1.9828 - 1.9432 1.00 1543 167 0.1258 0.1246 REMARK 3 18 1.9432 - 1.9065 1.00 1462 169 0.1264 0.1620 REMARK 3 19 1.9065 - 1.8724 1.00 1550 156 0.1286 0.1751 REMARK 3 20 1.8724 - 1.8407 1.00 1469 174 0.1327 0.1761 REMARK 3 21 1.8407 - 1.8110 1.00 1508 190 0.1346 0.1739 REMARK 3 22 1.8110 - 1.7831 1.00 1477 185 0.1425 0.1553 REMARK 3 23 1.7831 - 1.7569 1.00 1478 188 0.1396 0.1782 REMARK 3 24 1.7569 - 1.7322 1.00 1489 170 0.1405 0.1799 REMARK 3 25 1.7322 - 1.7088 1.00 1483 175 0.1401 0.1581 REMARK 3 26 1.7088 - 1.6866 1.00 1481 170 0.1355 0.1678 REMARK 3 27 1.6866 - 1.6655 1.00 1508 170 0.1457 0.1856 REMARK 3 28 1.6655 - 1.6454 1.00 1485 165 0.1476 0.1723 REMARK 3 29 1.6454 - 1.6263 1.00 1522 160 0.1529 0.1774 REMARK 3 30 1.6263 - 1.6080 0.99 1480 167 0.1619 0.1973 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2718 REMARK 3 ANGLE : 1.170 3732 REMARK 3 CHIRALITY : 0.064 387 REMARK 3 PLANARITY : 0.007 480 REMARK 3 DIHEDRAL : 15.559 1667 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -15.7873 17.6322 13.4753 REMARK 3 T TENSOR REMARK 3 T11: 0.0885 T22: 0.1605 REMARK 3 T33: 0.1376 T12: -0.0192 REMARK 3 T13: 0.0361 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 0.3091 L22: 0.5663 REMARK 3 L33: 1.4563 L12: 0.1389 REMARK 3 L13: 0.0268 L23: 0.0652 REMARK 3 S TENSOR REMARK 3 S11: -0.0839 S12: 0.0732 S13: -0.0527 REMARK 3 S21: -0.0925 S22: 0.0749 S23: -0.0867 REMARK 3 S31: 0.1155 S32: 0.1798 S33: 0.0186 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VW7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-17. REMARK 100 THE DEPOSITION ID IS D_1000228038. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-FEB-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50821 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 49.450 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.02800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.4 REMARK 200 DATA REDUNDANCY IN SHELL : 3.20 REMARK 200 R MERGE FOR SHELL (I) : 0.16500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3LO8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22-24% PEG 8000, 0.1 M SODIUM REMARK 280 CACODYLATE (PH 6-7), 0.18-0.22 M MAGNESIUM ACETATE, 100 MM REMARK 280 NICOTINAMIDE, PH 7.4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 125.35467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.67733 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.67733 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 125.35467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 894 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 VAL A 2 REMARK 465 GLN A 3 REMARK 465 GLN A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 ARG A 7 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 GLU A 162 CG CD OE1 OE2 REMARK 470 LYS A 241 CG CD CE NZ REMARK 470 ARG A 243 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 292 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 93 HO4' FDA A 404 1.35 REMARK 500 HH TYR A 118 O HOH A 508 1.57 REMARK 500 O HOH A 725 O HOH A 874 1.90 REMARK 500 O HOH A 851 O HOH A 907 2.05 REMARK 500 O HOH A 904 O HOH A 913 2.07 REMARK 500 O LYS A 241 O HOH A 501 2.08 REMARK 500 O HOH A 652 O HOH A 886 2.08 REMARK 500 O HOH A 842 O HOH A 887 2.09 REMARK 500 O HOH A 941 O HOH A 967 2.09 REMARK 500 O HOH A 624 O HOH A 942 2.11 REMARK 500 OE1 GLU A 52 O HOH A 502 2.12 REMARK 500 O HOH A 893 O HOH A 936 2.12 REMARK 500 O HOH A 676 O HOH A 782 2.12 REMARK 500 O HOH A 515 O HOH A 693 2.16 REMARK 500 OD1 ASP A 285 O HOH A 503 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 966 O HOH A 1005 5565 1.88 REMARK 500 O HOH A 874 O HOH A 886 5565 1.98 REMARK 500 O HOH A 805 O HOH A 966 5665 1.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 83 79.57 -168.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1026 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1027 DISTANCE = 6.50 ANGSTROMS REMARK 525 HOH A1028 DISTANCE = 6.78 ANGSTROMS REMARK 525 HOH A1029 DISTANCE = 6.82 ANGSTROMS REMARK 525 HOH A1030 DISTANCE = 8.16 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 599 O REMARK 620 2 HOH A 659 O 93.3 REMARK 620 3 HOH A 738 O 85.0 178.4 REMARK 620 4 HOH A 827 O 91.3 86.1 93.8 REMARK 620 5 HOH A 947 O 91.2 83.4 96.8 169.3 REMARK 620 6 HOH A 957 O 177.5 85.4 96.2 86.5 90.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NAP A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FDA A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5VW3 RELATED DB: PDB REMARK 900 RELATED ID: 5VW2 RELATED DB: PDB REMARK 900 RELATED ID: 5VW4 RELATED DB: PDB REMARK 900 RELATED ID: 5VW5 RELATED DB: PDB REMARK 900 RELATED ID: 5VW6 RELATED DB: PDB REMARK 900 RELATED ID: 5VW8 RELATED DB: PDB REMARK 900 RELATED ID: 5VWB RELATED DB: PDB REMARK 900 RELATED ID: 5VW9 RELATED DB: PDB REMARK 900 RELATED ID: 5VWA RELATED DB: PDB DBREF 5VW7 A 1 316 UNP Q41736 Q41736_MAIZE 12 327 SEQADV 5VW7 ALA A 316 UNP Q41736 TYR 327 ENGINEERED MUTATION SEQRES 1 A 316 SER VAL GLN GLN ALA SER ARG SER LYS VAL SER VAL ALA SEQRES 2 A 316 PRO LEU HIS LEU GLU SER ALA LYS GLU PRO PRO LEU ASN SEQRES 3 A 316 THR TYR LYS PRO LYS GLU PRO PHE THR ALA THR ILE VAL SEQRES 4 A 316 SER VAL GLU SER LEU VAL GLY PRO LYS ALA PRO GLY GLU SEQRES 5 A 316 THR CYS HIS ILE VAL ILE ASP HIS GLY GLY ASN VAL PRO SEQRES 6 A 316 TYR TRP GLU GLY GLN SER TYR GLY VAL ILE PRO PRO GLY SEQRES 7 A 316 GLU ASN PRO LYS LYS PRO GLY ALA PRO GLN ASN VAL ARG SEQRES 8 A 316 LEU TYR SER ILE ALA SER THR ARG TYR GLY ASP ASN PHE SEQRES 9 A 316 ASP GLY ARG THR GLY SER LEU CYS VAL ARG ARG ALA VAL SEQRES 10 A 316 TYR TYR ASP PRO GLU THR GLY LYS GLU ASP PRO SER LYS SEQRES 11 A 316 ASN GLY VAL CYS SER ASN PHE LEU CYS ASN SER LYS PRO SEQRES 12 A 316 GLY ASP LYS ILE GLN LEU THR GLY PRO SER GLY LYS ILE SEQRES 13 A 316 MET LEU LEU PRO GLU GLU ASP PRO ASN ALA THR HIS ILE SEQRES 14 A 316 MET ILE ALA THR GLY THR GLY VAL ALA PRO PHE ARG GLY SEQRES 15 A 316 TYR LEU ARG ARG MET PHE MET GLU ASP VAL PRO ASN TYR SEQRES 16 A 316 ARG PHE GLY GLY LEU ALA TRP LEU PHE LEU GLY VAL ALA SEQRES 17 A 316 ASN SER ASP SER LEU LEU TYR ASP GLU GLU PHE THR SER SEQRES 18 A 316 TYR LEU LYS GLN TYR PRO ASP ASN PHE ARG TYR ASP LYS SEQRES 19 A 316 ALA LEU SER ARG GLU GLN LYS ASN ARG SER GLY GLY LYS SEQRES 20 A 316 MET TYR VAL GLN ASP LYS ILE GLU GLU TYR SER ASP GLU SEQRES 21 A 316 ILE PHE LYS LEU LEU ASP GLY GLY ALA HIS ILE TYR PHE SEQRES 22 A 316 CYS GLY LEU LYS GLY MET MET PRO GLY ILE GLN ASP THR SEQRES 23 A 316 LEU LYS LYS VAL ALA GLU ARG ARG GLY GLU SER TRP ASP SEQRES 24 A 316 GLN LYS LEU ALA GLN LEU LYS LYS ASN LYS GLN TRP HIS SEQRES 25 A 316 VAL GLU VAL ALA HET MG A 401 1 HET ACT A 402 7 HET NAP A 403 73 HET FDA A 404 86 HETNAM MG MAGNESIUM ION HETNAM ACT ACETATE ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETNAM FDA DIHYDROFLAVINE-ADENINE DINUCLEOTIDE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 2 MG MG 2+ FORMUL 3 ACT C2 H3 O2 1- FORMUL 4 NAP C21 H28 N7 O17 P3 FORMUL 5 FDA C27 H35 N9 O15 P2 FORMUL 6 HOH *530(H2 O) HELIX 1 AA1 PRO A 14 SER A 19 5 6 HELIX 2 AA2 ASP A 127 ASN A 131 5 5 HELIX 3 AA3 GLY A 132 ASN A 140 1 9 HELIX 4 AA4 VAL A 177 MET A 189 1 13 HELIX 5 AA5 ASN A 209 LEU A 213 5 5 HELIX 6 AA6 TYR A 215 TYR A 226 1 12 HELIX 7 AA7 TYR A 249 TYR A 257 1 9 HELIX 8 AA8 TYR A 257 GLY A 267 1 11 HELIX 9 AA9 GLY A 278 GLY A 295 1 18 HELIX 10 AB1 SER A 297 ASN A 308 1 12 SHEET 1 AA1 6 ARG A 91 SER A 94 0 SHEET 2 AA1 6 SER A 71 ILE A 75 -1 N TYR A 72 O TYR A 93 SHEET 3 AA1 6 LYS A 146 SER A 153 -1 O SER A 153 N SER A 71 SHEET 4 AA1 6 PHE A 34 SER A 43 -1 N PHE A 34 O LEU A 149 SHEET 5 AA1 6 THR A 53 ASP A 59 -1 O ASP A 59 N THR A 37 SHEET 6 AA1 6 THR A 108 ARG A 114 -1 O GLY A 109 N ILE A 58 SHEET 1 AA2 5 PHE A 230 LEU A 236 0 SHEET 2 AA2 5 LEU A 200 VAL A 207 1 N LEU A 203 O ARG A 231 SHEET 3 AA2 5 THR A 167 THR A 173 1 N MET A 170 O TRP A 202 SHEET 4 AA2 5 HIS A 270 LEU A 276 1 O HIS A 270 N ILE A 169 SHEET 5 AA2 5 TRP A 311 ALA A 316 1 O GLU A 314 N PHE A 273 SSBOND 1 CYS A 54 CYS A 139 1555 1555 2.04 LINK MG MG A 401 O HOH A 599 1555 1555 2.08 LINK MG MG A 401 O HOH A 659 1555 1555 2.10 LINK MG MG A 401 O HOH A 738 1555 1555 2.04 LINK MG MG A 401 O HOH A 827 1555 1555 2.20 LINK MG MG A 401 O HOH A 947 1555 1555 2.11 LINK MG MG A 401 O HOH A 957 1555 1555 2.07 CISPEP 1 ALA A 13 PRO A 14 0 -1.49 CISPEP 2 GLY A 151 PRO A 152 0 -1.59 SITE 1 AC1 6 HOH A 599 HOH A 659 HOH A 738 HOH A 827 SITE 2 AC1 6 HOH A 947 HOH A 957 SITE 1 AC2 9 LEU A 265 ASP A 266 GLN A 304 LEU A 305 SITE 2 AC2 9 ASN A 308 GLN A 310 HOH A 504 HOH A 511 SITE 3 AC2 9 HOH A 745 SITE 1 AC3 36 SER A 94 ARG A 114 THR A 173 GLY A 174 SITE 2 AC3 36 THR A 175 GLY A 176 GLY A 206 VAL A 207 SITE 3 AC3 36 ALA A 208 SER A 237 ARG A 238 LYS A 247 SITE 4 AC3 36 TYR A 249 GLN A 251 CYS A 274 GLY A 275 SITE 5 AC3 36 LEU A 276 GLY A 278 MET A 279 GLU A 314 SITE 6 AC3 36 VAL A 315 FDA A 404 HOH A 513 HOH A 545 SITE 7 AC3 36 HOH A 583 HOH A 608 HOH A 615 HOH A 624 SITE 8 AC3 36 HOH A 631 HOH A 639 HOH A 683 HOH A 714 SITE 9 AC3 36 HOH A 717 HOH A 719 HOH A 756 HOH A 783 SITE 1 AC4 29 ARG A 91 LEU A 92 TYR A 93 SER A 94 SITE 2 AC4 29 CYS A 112 VAL A 113 ARG A 114 ALA A 116 SITE 3 AC4 29 LYS A 130 ASN A 131 GLY A 132 VAL A 133 SITE 4 AC4 29 CYS A 134 SER A 135 THR A 175 LYS A 263 SITE 5 AC4 29 NAP A 403 HOH A 540 HOH A 543 HOH A 556 SITE 6 AC4 29 HOH A 571 HOH A 577 HOH A 605 HOH A 617 SITE 7 AC4 29 HOH A 632 HOH A 674 HOH A 682 HOH A 772 SITE 8 AC4 29 HOH A 777 CRYST1 59.188 59.188 188.032 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016895 0.009755 0.000000 0.00000 SCALE2 0.000000 0.019509 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005318 0.00000