HEADER APOPTOSIS 23-MAY-17 5VWX TITLE BAK CORE LATCH DIMER IN COMPLEX WITH BIM-H0-H3GLT COMPND MOL_ID: 1; COMPND 2 MOLECULE: BCL-2 HOMOLOGOUS ANTAGONIST/KILLER; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: UNP RESIDUES 23-186; COMPND 5 SYNONYM: APOPTOSIS REGULATOR BAK,BCL-2-LIKE PROTEIN 7,BCL2-L-7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: BCL-2-LIKE PROTEIN 11; COMPND 9 CHAIN: B, D; COMPND 10 FRAGMENT: UNP RESIDUES 142-164; COMPND 11 SYNONYM: BCL2-L-11,BCL2-INTERACTING MEDIATOR OF CELL DEATH; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAK1, BAK, BCL2L7, CDN1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS APOPTOSIS, BCL-2 FAMILY, INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR J.M.BROUWER,P.LAN,G.LESSENE,P.M.COLMAN,P.E.CZABOTAR REVDAT 5 08-JAN-20 5VWX 1 COMPND HETNAM REVDAT 4 18-APR-18 5VWX 1 COMPND REMARK HETNAM REVDAT 3 06-DEC-17 5VWX 1 REMARK REVDAT 2 29-NOV-17 5VWX 1 JRNL REVDAT 1 15-NOV-17 5VWX 0 JRNL AUTH J.M.BROUWER,P.LAN,A.D.COWAN,J.P.BERNARDINI,R.W.BIRKINSHAW, JRNL AUTH 2 M.F.VAN DELFT,B.E.SLEEBS,A.Y.ROBIN,A.WARDAK,I.K.TAN, JRNL AUTH 3 B.RELJIC,E.F.LEE,W.D.FAIRLIE,M.J.CALL,B.J.SMITH,G.DEWSON, JRNL AUTH 4 G.LESSENE,P.M.COLMAN,P.E.CZABOTAR JRNL TITL CONVERSION OF BIM-BH3 FROM ACTIVATOR TO INHIBITOR OF BAK JRNL TITL 2 THROUGH STRUCTURE-BASED DESIGN. JRNL REF MOL. CELL V. 68 659 2017 JRNL REFN ISSN 1097-4164 JRNL PMID 29149594 JRNL DOI 10.1016/J.MOLCEL.2017.11.001 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 13159 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.256 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.305 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1319 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2567 - 5.1748 0.98 1405 158 0.2290 0.2767 REMARK 3 2 5.1748 - 4.1081 1.00 1357 151 0.2051 0.2172 REMARK 3 3 4.1081 - 3.5890 0.99 1340 147 0.2230 0.2921 REMARK 3 4 3.5890 - 3.2609 0.99 1312 145 0.2479 0.3415 REMARK 3 5 3.2609 - 3.0272 0.99 1314 149 0.2816 0.3287 REMARK 3 6 3.0272 - 2.8488 0.99 1304 147 0.2881 0.3362 REMARK 3 7 2.8488 - 2.7061 0.99 1308 152 0.2871 0.3559 REMARK 3 8 2.7061 - 2.5883 0.99 1297 138 0.3119 0.3529 REMARK 3 9 2.5883 - 2.4887 0.91 1203 132 0.3353 0.4524 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 37.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2886 REMARK 3 ANGLE : 0.416 3896 REMARK 3 CHIRALITY : 0.037 406 REMARK 3 PLANARITY : 0.002 509 REMARK 3 DIHEDRAL : 20.524 1677 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 119 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.9078 1.3362 34.2921 REMARK 3 T TENSOR REMARK 3 T11: 0.1601 T22: 0.5885 REMARK 3 T33: 0.2668 T12: 0.0402 REMARK 3 T13: 0.0063 T23: 0.0515 REMARK 3 L TENSOR REMARK 3 L11: 3.1560 L22: 2.7237 REMARK 3 L33: 4.0377 L12: 0.0079 REMARK 3 L13: 1.8955 L23: 0.8796 REMARK 3 S TENSOR REMARK 3 S11: 0.0891 S12: 0.2013 S13: -0.2190 REMARK 3 S21: 0.1404 S22: -0.1040 S23: 0.3889 REMARK 3 S31: 0.2754 S32: -0.6694 S33: 0.0696 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 120 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.8290 5.3665 50.5966 REMARK 3 T TENSOR REMARK 3 T11: -0.0708 T22: 1.1647 REMARK 3 T33: 0.2778 T12: 0.0467 REMARK 3 T13: 0.0499 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 2.8492 L22: -0.0181 REMARK 3 L33: 1.4494 L12: 0.2653 REMARK 3 L13: -1.8259 L23: -0.0995 REMARK 3 S TENSOR REMARK 3 S11: 0.3427 S12: -0.3493 S13: 0.3933 REMARK 3 S21: 0.0422 S22: -0.0181 S23: 0.0335 REMARK 3 S31: -0.0871 S32: -0.0781 S33: -0.0039 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 142 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.4433 -0.5052 40.8820 REMARK 3 T TENSOR REMARK 3 T11: 0.2430 T22: 0.5351 REMARK 3 T33: 0.2831 T12: 0.0483 REMARK 3 T13: -0.0815 T23: 0.0696 REMARK 3 L TENSOR REMARK 3 L11: 5.1953 L22: 4.8611 REMARK 3 L33: 6.3405 L12: -1.5417 REMARK 3 L13: 0.0110 L23: 2.6418 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: -0.8573 S13: -0.2899 REMARK 3 S21: 0.4261 S22: 0.3068 S23: 0.0144 REMARK 3 S31: 0.7998 S32: 0.5669 S33: -0.2878 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 22 THROUGH 69 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.0972 0.0754 59.9044 REMARK 3 T TENSOR REMARK 3 T11: 0.1594 T22: 0.8349 REMARK 3 T33: 0.3055 T12: 0.0176 REMARK 3 T13: -0.0254 T23: 0.1300 REMARK 3 L TENSOR REMARK 3 L11: 4.2491 L22: 8.5983 REMARK 3 L33: 4.7621 L12: 0.3740 REMARK 3 L13: 3.8114 L23: -2.0848 REMARK 3 S TENSOR REMARK 3 S11: 0.2859 S12: -0.2325 S13: -0.1920 REMARK 3 S21: 0.1729 S22: -0.2497 S23: -0.1595 REMARK 3 S31: 0.2273 S32: 0.2117 S33: -0.0984 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 70 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.6776 4.0914 41.0476 REMARK 3 T TENSOR REMARK 3 T11: 0.2213 T22: 0.4422 REMARK 3 T33: 0.1445 T12: 0.0600 REMARK 3 T13: -0.0451 T23: 0.0139 REMARK 3 L TENSOR REMARK 3 L11: 3.3427 L22: 0.2126 REMARK 3 L33: 0.9355 L12: 0.0797 REMARK 3 L13: -1.0216 L23: -0.0044 REMARK 3 S TENSOR REMARK 3 S11: -0.0172 S12: 0.6746 S13: -0.0124 REMARK 3 S21: -0.0364 S22: 0.0912 S23: -0.0073 REMARK 3 S31: 0.0925 S32: -0.6729 S33: -0.0526 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 142 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.7640 -0.4897 45.8636 REMARK 3 T TENSOR REMARK 3 T11: 0.2826 T22: 0.7142 REMARK 3 T33: 0.2785 T12: -0.0403 REMARK 3 T13: -0.0088 T23: -0.0664 REMARK 3 L TENSOR REMARK 3 L11: 2.8719 L22: 7.4208 REMARK 3 L33: 8.4375 L12: -0.9440 REMARK 3 L13: 1.3311 L23: -5.7652 REMARK 3 S TENSOR REMARK 3 S11: -0.2652 S12: 0.5554 S13: -0.0427 REMARK 3 S21: -0.3673 S22: 0.4801 S23: 0.3748 REMARK 3 S31: 0.7393 S32: -0.8448 S33: -0.3195 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5VWX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000227125. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9464 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13253 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.489 REMARK 200 RESOLUTION RANGE LOW (A) : 48.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.16480 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.25 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM CALCIUM ACETATE, 30 % PEG 400 REMARK 280 AND 100 MM SODIUM ACETATE-ACETIC ACID PH 5.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.81450 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.77300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.24050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 38.77300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.81450 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.24050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -117.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 17 REMARK 465 PRO A 18 REMARK 465 LEU A 19 REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 ALA A 49 REMARK 465 GLU A 50 REMARK 465 GLY A 51 REMARK 465 VAL A 52 REMARK 465 ALA A 53 REMARK 465 ALA A 54 REMARK 465 PRO A 55 REMARK 465 ALA A 56 REMARK 465 ASP A 57 REMARK 465 PRO A 58 REMARK 465 GLU A 59 REMARK 465 MET A 60 REMARK 465 VAL A 61 REMARK 465 THR A 62 REMARK 465 LEU A 63 REMARK 465 PRO A 64 REMARK 465 GLY A 186 REMARK 465 GLY C 17 REMARK 465 PRO C 18 REMARK 465 LEU C 19 REMARK 465 GLY C 20 REMARK 465 SER C 21 REMARK 465 GLU C 50 REMARK 465 GLY C 51 REMARK 465 VAL C 52 REMARK 465 ALA C 53 REMARK 465 ALA C 54 REMARK 465 PRO C 55 REMARK 465 ALA C 56 REMARK 465 ASP C 57 REMARK 465 PRO C 58 REMARK 465 GLU C 59 REMARK 465 MET C 60 REMARK 465 VAL C 61 REMARK 465 THR C 62 REMARK 465 LEU C 63 REMARK 465 PRO C 64 REMARK 465 ASN C 185 REMARK 465 GLY C 186 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 173 O HOH C 301 2.07 REMARK 500 OE1 GLN A 98 O HOH A 201 2.08 REMARK 500 O HOH A 205 O HOH A 214 2.08 REMARK 500 O GLN C 29 O HOH C 302 2.09 REMARK 500 O GLY C 146 O HOH C 303 2.10 REMARK 500 OE2 GLU A 24 O HOH A 202 2.13 REMARK 500 O GLY C 82 ND2 ASN C 86 2.15 REMARK 500 NH1 ARG C 36 O HOH C 304 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 9R4 B 155 -74.39 -47.36 REMARK 500 9R4 D 155 -76.25 -36.05 REMARK 500 TYR D 163 -22.02 -141.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 201 DBREF 5VWX A 23 186 UNP Q16611 BAK_HUMAN 23 186 DBREF 5VWX B 142 164 UNP O43521 B2L11_HUMAN 142 164 DBREF 5VWX C 23 186 UNP Q16611 BAK_HUMAN 23 186 DBREF 5VWX D 142 164 UNP O43521 B2L11_HUMAN 142 164 SEQADV 5VWX GLY A 17 UNP Q16611 EXPRESSION TAG SEQADV 5VWX PRO A 18 UNP Q16611 EXPRESSION TAG SEQADV 5VWX LEU A 19 UNP Q16611 EXPRESSION TAG SEQADV 5VWX GLY A 20 UNP Q16611 EXPRESSION TAG SEQADV 5VWX SER A 21 UNP Q16611 EXPRESSION TAG SEQADV 5VWX MET A 22 UNP Q16611 EXPRESSION TAG SEQADV 5VWX SER A 166 UNP Q16611 CYS 166 ENGINEERED MUTATION SEQADV 5VWX SER B 142 UNP O43521 MET 142 ENGINEERED MUTATION SEQADV 5VWX ILE B 144 UNP O43521 PRO 144 ENGINEERED MUTATION SEQADV 5VWX ILE B 145 UNP O43521 GLU 145 ENGINEERED MUTATION SEQADV 5VWX SER B 146 UNP O43521 ILE 146 ENGINEERED MUTATION SEQADV 5VWX ARG B 147 UNP O43521 TRP 147 ENGINEERED MUTATION SEQADV 5VWX THR B 162 UNP O43521 TYR 162 ENGINEERED MUTATION SEQADV 5VWX GLY C 17 UNP Q16611 EXPRESSION TAG SEQADV 5VWX PRO C 18 UNP Q16611 EXPRESSION TAG SEQADV 5VWX LEU C 19 UNP Q16611 EXPRESSION TAG SEQADV 5VWX GLY C 20 UNP Q16611 EXPRESSION TAG SEQADV 5VWX SER C 21 UNP Q16611 EXPRESSION TAG SEQADV 5VWX MET C 22 UNP Q16611 EXPRESSION TAG SEQADV 5VWX SER C 166 UNP Q16611 CYS 166 ENGINEERED MUTATION SEQADV 5VWX SER D 142 UNP O43521 MET 142 ENGINEERED MUTATION SEQADV 5VWX ILE D 144 UNP O43521 PRO 144 ENGINEERED MUTATION SEQADV 5VWX ILE D 145 UNP O43521 GLU 145 ENGINEERED MUTATION SEQADV 5VWX SER D 146 UNP O43521 ILE 146 ENGINEERED MUTATION SEQADV 5VWX ARG D 147 UNP O43521 TRP 147 ENGINEERED MUTATION SEQADV 5VWX THR D 162 UNP O43521 TYR 162 ENGINEERED MUTATION SEQRES 1 A 170 GLY PRO LEU GLY SER MET SER GLU GLU GLN VAL ALA GLN SEQRES 2 A 170 ASP THR GLU GLU VAL PHE ARG SER TYR VAL PHE TYR ARG SEQRES 3 A 170 HIS GLN GLN GLU GLN GLU ALA GLU GLY VAL ALA ALA PRO SEQRES 4 A 170 ALA ASP PRO GLU MET VAL THR LEU PRO LEU GLN PRO SER SEQRES 5 A 170 SER THR MET GLY GLN VAL GLY ARG GLN LEU ALA ILE ILE SEQRES 6 A 170 GLY ASP ASP ILE ASN ARG ARG TYR ASP SER GLU PHE GLN SEQRES 7 A 170 THR MET LEU GLN HIS LEU GLN PRO THR ALA GLU ASN ALA SEQRES 8 A 170 TYR GLU TYR PHE THR LYS ILE ALA THR SER LEU PHE GLU SEQRES 9 A 170 SER GLY ILE ASN TRP GLY ARG VAL VAL ALA LEU LEU GLY SEQRES 10 A 170 PHE GLY TYR ARG LEU ALA LEU HIS VAL TYR GLN HIS GLY SEQRES 11 A 170 LEU THR GLY PHE LEU GLY GLN VAL THR ARG PHE VAL VAL SEQRES 12 A 170 ASP PHE MET LEU HIS HIS SER ILE ALA ARG TRP ILE ALA SEQRES 13 A 170 GLN ARG GLY GLY TRP VAL ALA ALA LEU ASN LEU GLY ASN SEQRES 14 A 170 GLY SEQRES 1 B 23 SER ARG ILE ILE SER ARG ILE ALA GLN GLU LEU ARG ARG SEQRES 2 B 23 9R4 GLY ASP GLU PHE ASN ALA THR TYR ALA SEQRES 1 C 170 GLY PRO LEU GLY SER MET SER GLU GLU GLN VAL ALA GLN SEQRES 2 C 170 ASP THR GLU GLU VAL PHE ARG SER TYR VAL PHE TYR ARG SEQRES 3 C 170 HIS GLN GLN GLU GLN GLU ALA GLU GLY VAL ALA ALA PRO SEQRES 4 C 170 ALA ASP PRO GLU MET VAL THR LEU PRO LEU GLN PRO SER SEQRES 5 C 170 SER THR MET GLY GLN VAL GLY ARG GLN LEU ALA ILE ILE SEQRES 6 C 170 GLY ASP ASP ILE ASN ARG ARG TYR ASP SER GLU PHE GLN SEQRES 7 C 170 THR MET LEU GLN HIS LEU GLN PRO THR ALA GLU ASN ALA SEQRES 8 C 170 TYR GLU TYR PHE THR LYS ILE ALA THR SER LEU PHE GLU SEQRES 9 C 170 SER GLY ILE ASN TRP GLY ARG VAL VAL ALA LEU LEU GLY SEQRES 10 C 170 PHE GLY TYR ARG LEU ALA LEU HIS VAL TYR GLN HIS GLY SEQRES 11 C 170 LEU THR GLY PHE LEU GLY GLN VAL THR ARG PHE VAL VAL SEQRES 12 C 170 ASP PHE MET LEU HIS HIS SER ILE ALA ARG TRP ILE ALA SEQRES 13 C 170 GLN ARG GLY GLY TRP VAL ALA ALA LEU ASN LEU GLY ASN SEQRES 14 C 170 GLY SEQRES 1 D 23 SER ARG ILE ILE SER ARG ILE ALA GLN GLU LEU ARG ARG SEQRES 2 D 23 9R4 GLY ASP GLU PHE ASN ALA THR TYR ALA MODRES 5VWX 9R4 B 155 ILE MODIFIED RESIDUE MODRES 5VWX 9R4 D 155 ILE MODIFIED RESIDUE HET 9R4 B 155 15 HET 9R4 D 155 15 HET EDO B 201 10 HET EDO B 202 10 HET EDO C 201 10 HETNAM 9R4 D-GAMMA-GLUTAMYL-2-METHYL-L-ALANINE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 9R4 2(C9 H16 N2 O5) FORMUL 5 EDO 3(C2 H6 O2) FORMUL 8 HOH *37(H2 O) HELIX 1 AA1 SER A 23 GLU A 48 1 26 HELIX 2 AA2 SER A 69 GLY A 82 1 14 HELIX 3 AA3 GLY A 82 TYR A 89 1 8 HELIX 4 AA4 TYR A 89 GLN A 101 1 13 HELIX 5 AA5 ASN A 106 GLU A 120 1 15 HELIX 6 AA6 ASN A 124 HIS A 165 1 42 HELIX 7 AA7 SER A 166 GLN A 173 1 8 HELIX 8 AA8 ARG A 174 GLY A 175 5 2 HELIX 9 AA9 GLY A 176 LEU A 183 5 8 HELIX 10 AB1 ARG B 143 ALA B 164 1 22 HELIX 11 AB2 SER C 23 ALA C 49 1 27 HELIX 12 AB3 SER C 69 GLY C 82 1 14 HELIX 13 AB4 GLY C 82 TYR C 89 1 8 HELIX 14 AB5 TYR C 89 GLN C 101 1 13 HELIX 15 AB6 ASN C 106 GLU C 120 1 15 HELIX 16 AB7 ASN C 124 HIS C 165 1 42 HELIX 17 AB8 SER C 166 GLN C 173 1 8 HELIX 18 AB9 ARG C 174 GLY C 175 5 2 HELIX 19 AC1 GLY C 176 LEU C 183 5 8 HELIX 20 AC2 ARG D 143 ALA D 164 1 22 LINK C ARG B 154 N 9R4 B 155 1555 1555 1.33 LINK C 9R4 B 155 N GLY B 156 1555 1555 1.33 LINK C ARG D 154 N 9R4 D 155 1555 1555 1.33 LINK C 9R4 D 155 N GLY D 156 1555 1555 1.33 SITE 1 AC1 1 HOH B 303 CRYST1 61.629 76.481 77.546 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016226 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013075 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012896 0.00000