data_5VZ8 # _entry.id 5VZ8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5VZ8 pdb_00005vz8 10.2210/pdb5vz8/pdb WWPDB D_1000228173 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 5TWP unspecified PDB . 5TWQ unspecified PDB . 5TWR unspecified PDB . 5TWS unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5VZ8 _pdbx_database_status.recvd_initial_deposition_date 2017-05-27 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Moon, A.F.' 1 ? 'Pryor, J.M.' 2 ? 'Ramsden, D.A.' 3 ? 'Kunkel, T.A.' 4 ? 'Bebenek, K.' 5 ? 'Pedersen, L.C.' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 9138 _citation.page_last 9148 _citation.title 'Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkx527 _citation.pdbx_database_id_PubMed 28911097 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Moon, A.F.' 1 ? primary 'Pryor, J.M.' 2 ? primary 'Ramsden, D.A.' 3 ? primary 'Kunkel, T.A.' 4 ? primary 'Bebenek, K.' 5 ? primary 'Pedersen, L.C.' 6 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5VZ8 _cell.details ? _cell.formula_units_Z ? _cell.length_a 59.934 _cell.length_a_esd ? _cell.length_b 69.031 _cell.length_b_esd ? _cell.length_c 109.825 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5VZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA-directed DNA/RNA polymerase mu' 39858.188 1 2.7.7.7 G433A 'residues 134-494' ? 2 polymer syn ;DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3') ; 2740.812 1 ? ? ? ? 3 polymer syn ;DNA/RNA (5'-D(*CP*GP*TP*A)-R(P*U)-3') ; 1496.996 1 ? ? ? ? 4 polymer syn ;DNA (5'-D(P*GP*CP*CP*G)-3') ; 1191.818 1 ? ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn ;URIDINE 5'-TRIPHOSPHATE ; 484.141 1 ? ? ? ? 8 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 9 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 10 water nat water 18.015 355 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Pol Mu,Terminal transferase' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSAAASPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEH SSRVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLST PVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHS CCESPTRLAQQSHMDAFERSFCIFRLPQPGSWKAVRVDLVVAPVSQFPFALLAWTGSKLFQRELRRFSRKEKGLWLNSHG LFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA ; ;GSAAASPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEH SSRVVQELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLST PVLRSDVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHS CCESPTRLAQQSHMDAFERSFCIFRLPQPGSWKAVRVDLVVAPVSQFPFALLAWTGSKLFQRELRRFSRKEKGLWLNSHG LFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA ; A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DC)(DA)(DT)(DA)(DC)(DG)' CGGCATACG T ? 3 'polydeoxyribonucleotide/polyribonucleotide hybrid' no no '(DC)(DG)(DT)(DA)U' CGTAU P ? 4 polydeoxyribonucleotide no no '(DG)(DC)(DC)(DG)' GCCG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 ALA n 1 5 ALA n 1 6 SER n 1 7 PRO n 1 8 ALA n 1 9 TRP n 1 10 MET n 1 11 PRO n 1 12 ALA n 1 13 TYR n 1 14 ALA n 1 15 CYS n 1 16 GLN n 1 17 ARG n 1 18 PRO n 1 19 THR n 1 20 PRO n 1 21 LEU n 1 22 THR n 1 23 HIS n 1 24 HIS n 1 25 ASN n 1 26 THR n 1 27 GLY n 1 28 LEU n 1 29 SER n 1 30 GLU n 1 31 ALA n 1 32 LEU n 1 33 GLU n 1 34 ILE n 1 35 LEU n 1 36 ALA n 1 37 GLU n 1 38 ALA n 1 39 ALA n 1 40 GLY n 1 41 PHE n 1 42 GLU n 1 43 GLY n 1 44 SER n 1 45 GLU n 1 46 GLY n 1 47 ARG n 1 48 LEU n 1 49 LEU n 1 50 THR n 1 51 PHE n 1 52 CYS n 1 53 ARG n 1 54 ALA n 1 55 ALA n 1 56 SER n 1 57 VAL n 1 58 LEU n 1 59 LYS n 1 60 ALA n 1 61 LEU n 1 62 PRO n 1 63 SER n 1 64 PRO n 1 65 VAL n 1 66 THR n 1 67 THR n 1 68 LEU n 1 69 SER n 1 70 GLN n 1 71 LEU n 1 72 GLN n 1 73 GLY n 1 74 LEU n 1 75 PRO n 1 76 HIS n 1 77 PHE n 1 78 GLY n 1 79 GLU n 1 80 HIS n 1 81 SER n 1 82 SER n 1 83 ARG n 1 84 VAL n 1 85 VAL n 1 86 GLN n 1 87 GLU n 1 88 LEU n 1 89 LEU n 1 90 GLU n 1 91 HIS n 1 92 GLY n 1 93 VAL n 1 94 CYS n 1 95 GLU n 1 96 GLU n 1 97 VAL n 1 98 GLU n 1 99 ARG n 1 100 VAL n 1 101 ARG n 1 102 ARG n 1 103 SER n 1 104 GLU n 1 105 ARG n 1 106 TYR n 1 107 GLN n 1 108 THR n 1 109 MET n 1 110 LYS n 1 111 LEU n 1 112 PHE n 1 113 THR n 1 114 GLN n 1 115 ILE n 1 116 PHE n 1 117 GLY n 1 118 VAL n 1 119 GLY n 1 120 VAL n 1 121 LYS n 1 122 THR n 1 123 ALA n 1 124 ASP n 1 125 ARG n 1 126 TRP n 1 127 TYR n 1 128 ARG n 1 129 GLU n 1 130 GLY n 1 131 LEU n 1 132 ARG n 1 133 THR n 1 134 LEU n 1 135 ASP n 1 136 ASP n 1 137 LEU n 1 138 ARG n 1 139 GLU n 1 140 GLN n 1 141 PRO n 1 142 GLN n 1 143 LYS n 1 144 LEU n 1 145 THR n 1 146 GLN n 1 147 GLN n 1 148 GLN n 1 149 LYS n 1 150 ALA n 1 151 GLY n 1 152 LEU n 1 153 GLN n 1 154 HIS n 1 155 HIS n 1 156 GLN n 1 157 ASP n 1 158 LEU n 1 159 SER n 1 160 THR n 1 161 PRO n 1 162 VAL n 1 163 LEU n 1 164 ARG n 1 165 SER n 1 166 ASP n 1 167 VAL n 1 168 ASP n 1 169 ALA n 1 170 LEU n 1 171 GLN n 1 172 GLN n 1 173 VAL n 1 174 VAL n 1 175 GLU n 1 176 GLU n 1 177 ALA n 1 178 VAL n 1 179 GLY n 1 180 GLN n 1 181 ALA n 1 182 LEU n 1 183 PRO n 1 184 GLY n 1 185 ALA n 1 186 THR n 1 187 VAL n 1 188 THR n 1 189 LEU n 1 190 THR n 1 191 GLY n 1 192 GLY n 1 193 PHE n 1 194 ARG n 1 195 ARG n 1 196 GLY n 1 197 LYS n 1 198 LEU n 1 199 GLN n 1 200 GLY n 1 201 HIS n 1 202 ASP n 1 203 VAL n 1 204 ASP n 1 205 PHE n 1 206 LEU n 1 207 ILE n 1 208 THR n 1 209 HIS n 1 210 PRO n 1 211 LYS n 1 212 GLU n 1 213 GLY n 1 214 GLN n 1 215 GLU n 1 216 ALA n 1 217 GLY n 1 218 LEU n 1 219 LEU n 1 220 PRO n 1 221 ARG n 1 222 VAL n 1 223 MET n 1 224 CYS n 1 225 ARG n 1 226 LEU n 1 227 GLN n 1 228 ASP n 1 229 GLN n 1 230 GLY n 1 231 LEU n 1 232 ILE n 1 233 LEU n 1 234 TYR n 1 235 HIS n 1 236 GLN n 1 237 HIS n 1 238 GLN n 1 239 HIS n 1 240 SER n 1 241 CYS n 1 242 CYS n 1 243 GLU n 1 244 SER n 1 245 PRO n 1 246 THR n 1 247 ARG n 1 248 LEU n 1 249 ALA n 1 250 GLN n 1 251 GLN n 1 252 SER n 1 253 HIS n 1 254 MET n 1 255 ASP n 1 256 ALA n 1 257 PHE n 1 258 GLU n 1 259 ARG n 1 260 SER n 1 261 PHE n 1 262 CYS n 1 263 ILE n 1 264 PHE n 1 265 ARG n 1 266 LEU n 1 267 PRO n 1 268 GLN n 1 269 PRO n 1 270 GLY n 1 271 SER n 1 272 TRP n 1 273 LYS n 1 274 ALA n 1 275 VAL n 1 276 ARG n 1 277 VAL n 1 278 ASP n 1 279 LEU n 1 280 VAL n 1 281 VAL n 1 282 ALA n 1 283 PRO n 1 284 VAL n 1 285 SER n 1 286 GLN n 1 287 PHE n 1 288 PRO n 1 289 PHE n 1 290 ALA n 1 291 LEU n 1 292 LEU n 1 293 ALA n 1 294 TRP n 1 295 THR n 1 296 GLY n 1 297 SER n 1 298 LYS n 1 299 LEU n 1 300 PHE n 1 301 GLN n 1 302 ARG n 1 303 GLU n 1 304 LEU n 1 305 ARG n 1 306 ARG n 1 307 PHE n 1 308 SER n 1 309 ARG n 1 310 LYS n 1 311 GLU n 1 312 LYS n 1 313 GLY n 1 314 LEU n 1 315 TRP n 1 316 LEU n 1 317 ASN n 1 318 SER n 1 319 HIS n 1 320 GLY n 1 321 LEU n 1 322 PHE n 1 323 ASP n 1 324 PRO n 1 325 GLU n 1 326 GLN n 1 327 LYS n 1 328 THR n 1 329 PHE n 1 330 PHE n 1 331 GLN n 1 332 ALA n 1 333 ALA n 1 334 SER n 1 335 GLU n 1 336 GLU n 1 337 ASP n 1 338 ILE n 1 339 PHE n 1 340 ARG n 1 341 HIS n 1 342 LEU n 1 343 GLY n 1 344 LEU n 1 345 GLU n 1 346 TYR n 1 347 LEU n 1 348 PRO n 1 349 PRO n 1 350 GLU n 1 351 GLN n 1 352 ARG n 1 353 ASN n 1 354 ALA n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DC n 2 5 DA n 2 6 DT n 2 7 DA n 2 8 DC n 2 9 DG n 3 1 DC n 3 2 DG n 3 3 DT n 3 4 DA n 3 5 U n 4 1 DG n 4 2 DC n 4 3 DC n 4 4 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 354 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'POLM, polmu' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEXM _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 9 'synthetic construct' ? 32630 ? 3 1 sample 1 5 'synthetic construct' ? 32630 ? 4 1 sample 1 4 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP DPOLM_HUMAN Q9NP87 ? 1 ;SPAWMPAYACQRPTPLTHHNTGLSEALEILAEAAGFEGSEGRLLTFCRAASVLKALPSPVTTLSQLQGLPHFGEHSSRVV QELLEHGVCEEVERVRRSERYQTMKLFTQIFGVGVKTADRWYREGLRTLDDLREQPQKLTQQQKAGLQHHQDLSTPVLRS DVDALQQVVEEAVGQALPGATVTLTGGFRRGKLQGHDVDFLITHPKEGQEAGLLPRVMCRLQDQGLILYHQHQHSCCESP TRLAQQSHMDAFERSFCIFRLPQPPGAAVGGSTRPCPSWKAVRVDLVVAPVSQFPFALLGWTGSKLFQRELRRFSRKEKG LWLNSHGLFDPEQKTFFQAASEEDIFRHLGLEYLPPEQRNA ; 134 2 PDB 5VZ8 5VZ8 ? 2 ? 1 3 PDB 5VZ8 5VZ8 ? 3 ? 1 4 PDB 5VZ8 5VZ8 ? 4 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5VZ8 A 6 ? 354 ? Q9NP87 134 ? 494 ? 134 494 2 2 5VZ8 T 1 ? 9 ? 5VZ8 1 ? 9 ? 1 9 3 3 5VZ8 P 1 ? 5 ? 5VZ8 1 ? 5 ? 1 5 4 4 5VZ8 D 1 ? 4 ? 5VZ8 1 ? 4 ? 1 4 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5VZ8 GLY A 1 ? UNP Q9NP87 ? ? 'expression tag' 129 1 1 5VZ8 SER A 2 ? UNP Q9NP87 ? ? 'expression tag' 130 2 1 5VZ8 ALA A 3 ? UNP Q9NP87 ? ? 'expression tag' 131 3 1 5VZ8 ALA A 4 ? UNP Q9NP87 ? ? 'expression tag' 132 4 1 5VZ8 ALA A 5 ? UNP Q9NP87 ? ? 'expression tag' 133 5 1 5VZ8 ? A ? ? UNP Q9NP87 PRO 398 deletion ? 6 1 5VZ8 ? A ? ? UNP Q9NP87 GLY 399 deletion ? 7 1 5VZ8 ? A ? ? UNP Q9NP87 ALA 400 deletion ? 8 1 5VZ8 ? A ? ? UNP Q9NP87 ALA 401 deletion ? 9 1 5VZ8 ? A ? ? UNP Q9NP87 VAL 402 deletion ? 10 1 5VZ8 ? A ? ? UNP Q9NP87 GLY 403 deletion ? 11 1 5VZ8 ? A ? ? UNP Q9NP87 GLY 404 deletion ? 12 1 5VZ8 ? A ? ? UNP Q9NP87 SER 405 deletion ? 13 1 5VZ8 ? A ? ? UNP Q9NP87 THR 406 deletion ? 14 1 5VZ8 ? A ? ? UNP Q9NP87 ARG 407 deletion ? 15 1 5VZ8 ? A ? ? UNP Q9NP87 PRO 408 deletion ? 16 1 5VZ8 ? A ? ? UNP Q9NP87 CYS 409 deletion ? 17 1 5VZ8 GLY A 270 ? UNP Q9NP87 PRO 410 linker 410 18 1 5VZ8 ALA A 293 ? UNP Q9NP87 GLY 433 'engineered mutation' 433 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 UTP non-polymer . ;URIDINE 5'-TRIPHOSPHATE ; ? 'C9 H15 N2 O15 P3' 484.141 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5VZ8 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.51 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 50.96 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50mM HEPES pH 7.5, 10% PEG4K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details 'Rosenbaum-Rock vertical focusing mirror' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-04-13 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator 'Rosenbaum-Rock monochromator high-resolution double-crystal Si(220) sagittal focusing' _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5VZ8 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.60 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 59923 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.076 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 24.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 0.915 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.030 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.63 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 3.10 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2914 _reflns_shell.percent_possible_all 97.6 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 5.7 _reflns_shell.pdbx_Rsym_value 0.752 _reflns_shell.pdbx_chi_squared 0.772 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.344 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.769 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ;THE AUTHORS STATE THAT ANOMALOUS SIGNAL IS OBSERVED AT TWO POSITIONS IN THIS STRUCTURE--AT THE METAL OCCUPYING THE HHH2 SITE (PEAK > 10 SIGMA), AND AT THE METAL OCCUPYING THE METAL A SITE (PEAK > 6 SIGMA). NO KNOWN ANOMALOUS SCATTERERS WERE ADDED, SO THESE POSITIONS HAVE BEEN PUTATIVELY MODELED AS SODIUM (IN THE HHH2 SITE) AND MAGNESIUM (IN THE METAL A SITE), WHICH ARE CONSISTENT WITH THEIR IDENTITIES IN OTHER REPORTED STRUCTURES. ; _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5VZ8 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.601 _refine.ls_d_res_low 29.910 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 59605 _refine.ls_number_reflns_R_free 2973 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.07 _refine.ls_percent_reflns_R_free 4.99 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1729 _refine.ls_R_factor_R_free 0.1936 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1718 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.49 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4M04 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.77 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.13 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2530 _refine_hist.pdbx_number_atoms_nucleic_acid 349 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 355 _refine_hist.number_atoms_total 3284 _refine_hist.d_res_high 1.601 _refine_hist.d_res_low 29.910 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.009 ? 3229 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.077 ? 4490 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 9.575 ? 1672 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.059 ? 496 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 519 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.6007 1.6269 . . 119 2322 85.00 . . . 0.2641 . 0.2177 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6269 1.6550 . . 136 2600 96.00 . . . 0.2171 . 0.1994 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6550 1.6851 . . 140 2640 97.00 . . . 0.2441 . 0.1975 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6851 1.7175 . . 141 2678 98.00 . . . 0.2049 . 0.1832 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7175 1.7525 . . 139 2663 98.00 . . . 0.1886 . 0.1779 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7525 1.7906 . . 142 2663 98.00 . . . 0.2071 . 0.1799 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.7906 1.8323 . . 143 2684 98.00 . . . 0.2192 . 0.1824 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8323 1.8781 . . 143 2679 98.00 . . . 0.2141 . 0.1760 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8781 1.9289 . . 140 2678 99.00 . . . 0.2024 . 0.1796 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9289 1.9856 . . 138 2729 99.00 . . . 0.2352 . 0.1738 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.9856 2.0497 . . 142 2666 99.00 . . . 0.2035 . 0.1679 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0497 2.1229 . . 139 2719 99.00 . . . 0.1890 . 0.1699 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1229 2.2079 . . 143 2709 99.00 . . . 0.1843 . 0.1683 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.2079 2.3084 . . 149 2717 99.00 . . . 0.1976 . 0.1700 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3084 2.4300 . . 137 2730 100.00 . . . 0.1926 . 0.1688 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.4300 2.5822 . . 145 2736 99.00 . . . 0.1865 . 0.1780 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5822 2.7814 . . 149 2769 100.00 . . . 0.1915 . 0.1817 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7814 3.0611 . . 144 2765 100.00 . . . 0.2012 . 0.1857 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0611 3.5034 . . 146 2799 100.00 . . . 0.1907 . 0.1632 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5034 4.4117 . . 149 2803 100.00 . . . 0.1441 . 0.1455 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.4117 29.9154 . . 149 2883 97.00 . . . 0.2001 . 0.1697 . . . . . . . . . . # _struct.entry_id 5VZ8 _struct.title 'Post-catalytic complex of human Polymerase Mu (G433A) mutant with incoming UTP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5VZ8 _struct_keywords.text 'Family X, nonhomologous end-joining, DNA double strand break repair, ribonucleotide incorporation, TRANSFERASE-DNA complex' _struct_keywords.pdbx_keywords TRANSFERASE/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 8 ? J N N 8 ? K N N 8 ? L N N 9 ? M N N 10 ? N N N 10 ? O N N 10 ? P N N 10 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 13 ? ARG A 17 ? TYR A 141 ARG A 145 5 ? 5 HELX_P HELX_P2 AA2 ASN A 25 ? GLU A 42 ? ASN A 153 GLU A 170 1 ? 18 HELX_P HELX_P3 AA3 SER A 44 ? LEU A 61 ? SER A 172 LEU A 189 1 ? 18 HELX_P HELX_P4 AA4 THR A 67 ? GLN A 72 ? THR A 195 GLN A 200 5 ? 6 HELX_P HELX_P5 AA5 GLY A 78 ? GLY A 92 ? GLY A 206 GLY A 220 1 ? 15 HELX_P HELX_P6 AA6 CYS A 94 ? SER A 103 ? CYS A 222 SER A 231 1 ? 10 HELX_P HELX_P7 AA7 SER A 103 ? GLN A 114 ? SER A 231 GLN A 242 1 ? 12 HELX_P HELX_P8 AA8 GLY A 119 ? GLU A 129 ? GLY A 247 GLU A 257 1 ? 11 HELX_P HELX_P9 AA9 THR A 133 ? GLU A 139 ? THR A 261 GLU A 267 1 ? 7 HELX_P HELX_P10 AB1 GLN A 140 ? LEU A 144 ? GLN A 268 LEU A 272 5 ? 5 HELX_P HELX_P11 AB2 THR A 145 ? HIS A 154 ? THR A 273 HIS A 282 1 ? 10 HELX_P HELX_P12 AB3 HIS A 154 ? SER A 159 ? HIS A 282 SER A 287 1 ? 6 HELX_P HELX_P13 AB4 ARG A 164 ? LEU A 182 ? ARG A 292 LEU A 310 1 ? 19 HELX_P HELX_P14 AB5 THR A 190 ? ARG A 195 ? THR A 318 ARG A 323 1 ? 6 HELX_P HELX_P15 AB6 GLY A 217 ? GLN A 229 ? GLY A 345 GLN A 357 1 ? 13 HELX_P HELX_P16 AB7 PRO A 283 ? SER A 285 ? PRO A 423 SER A 425 5 ? 3 HELX_P HELX_P17 AB8 GLN A 286 ? GLY A 296 ? GLN A 426 GLY A 436 1 ? 11 HELX_P HELX_P18 AB9 SER A 297 ? GLY A 313 ? SER A 437 GLY A 453 1 ? 17 HELX_P HELX_P19 AC1 SER A 334 ? LEU A 342 ? SER A 474 LEU A 482 1 ? 9 HELX_P HELX_P20 AC2 PRO A 348 ? ARG A 352 ? PRO A 488 ARG A 492 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 113 O ? ? ? 1_555 G NA . NA ? ? A THR 241 A NA 503 1_555 ? ? ? ? ? ? ? 2.338 ? ? metalc2 metalc ? ? A ILE 115 O ? ? ? 1_555 G NA . NA ? ? A ILE 243 A NA 503 1_555 ? ? ? ? ? ? ? 2.441 ? ? metalc3 metalc ? ? A VAL 118 O ? ? ? 1_555 G NA . NA ? ? A VAL 246 A NA 503 1_555 ? ? ? ? ? ? ? 2.295 ? ? metalc4 metalc ? ? A ASP 202 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 330 A MG 501 1_555 ? ? ? ? ? ? ? 1.937 ? ? metalc5 metalc ? ? A ASP 202 OD1 ? ? ? 1_555 F MG . MG ? ? A ASP 330 A MG 502 1_555 ? ? ? ? ? ? ? 2.019 ? ? metalc6 metalc ? ? A ASP 204 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 332 A MG 501 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc7 metalc ? ? A ASP 204 OD2 ? ? ? 1_555 F MG . MG ? ? A ASP 332 A MG 502 1_555 ? ? ? ? ? ? ? 2.044 ? ? metalc8 metalc ? ? A ASP 278 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 418 A MG 501 1_555 ? ? ? ? ? ? ? 2.086 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 H UTP . O2A ? ? A MG 501 A UTP 504 1_555 ? ? ? ? ? ? ? 2.389 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 I EDO . O1 ? ? A MG 501 A EDO 505 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 I EDO . O2 ? ? A MG 501 A EDO 505 1_555 ? ? ? ? ? ? ? 2.054 ? ? metalc12 metalc ? ? F MG . MG ? ? ? 1_555 H UTP . O2A ? ? A MG 502 A UTP 504 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc13 metalc ? ? F MG . MG ? ? ? 1_555 H UTP . O1B ? ? A MG 502 A UTP 504 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 H UTP . O1G ? ? A MG 502 A UTP 504 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc15 metalc ? ? F MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 502 A HOH 706 1_555 ? ? ? ? ? ? ? 2.107 ? ? metalc16 metalc ? ? G NA . NA ? ? ? 1_555 C DT 3 OP1 ? ? A NA 503 P DT 3 1_555 ? ? ? ? ? ? ? 2.387 ? ? metalc17 metalc ? ? G NA . NA ? ? ? 1_555 C U 5 OP1 ? ? A NA 503 P U 5 1_555 ? ? ? ? ? ? ? 2.266 ? ? metalc18 metalc ? ? G NA . NA ? ? ? 1_555 O HOH . O ? ? A NA 503 P HOH 107 1_555 ? ? ? ? ? ? ? 2.383 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 4 N1 A ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N3 ? ? ? 1_555 D DG 4 N1 B ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 4 O6 A ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 1 N4 ? ? ? 1_555 D DG 4 O6 B ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 4 N2 A ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DC 1 O2 ? ? ? 1_555 D DG 4 N2 B ? T DC 1 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 2 N1 ? ? ? 1_555 D DC 3 N3 A ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 2 N1 ? ? ? 1_555 D DC 3 N3 B ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 2 N2 ? ? ? 1_555 D DC 3 O2 A ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DG 2 N2 ? ? ? 1_555 D DC 3 O2 B ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DG 2 O6 ? ? ? 1_555 D DC 3 N4 A ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DG 2 O6 ? ? ? 1_555 D DC 3 N4 B ? T DG 2 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DG 3 N1 ? ? ? 1_555 D DC 2 N3 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DG 3 N2 ? ? ? 1_555 D DC 2 O2 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DG 3 O6 ? ? ? 1_555 D DC 2 N4 ? ? T DG 3 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 4 N3 ? ? ? 1_555 D DG 1 N1 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DC 4 N4 ? ? ? 1_555 D DG 1 O6 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DC 4 O2 ? ? ? 1_555 D DG 1 N2 ? ? T DC 4 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DT 6 N3 ? ? ? 1_555 C DA 4 N1 ? ? T DT 6 P DA 4 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog20 hydrog ? ? B DT 6 O2 ? ? ? 1_555 C DA 4 N6 ? ? T DT 6 P DA 4 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog21 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 3 N3 ? ? T DA 7 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 3 O4 ? ? T DA 7 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DC 8 N3 ? ? ? 1_555 C DG 2 N1 ? ? T DC 8 P DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DC 8 N4 ? ? ? 1_555 C DG 2 O6 ? ? T DC 8 P DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DC 8 O2 ? ? ? 1_555 C DG 2 N2 ? ? T DC 8 P DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DG 9 N1 ? ? ? 1_555 C DC 1 N3 ? ? T DG 9 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DG 9 N2 ? ? ? 1_555 C DC 1 O2 ? ? T DG 9 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DG 9 O6 ? ? ? 1_555 C DC 1 N4 ? ? T DG 9 P DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 296 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 436 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 297 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 437 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.74 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 5 ? AA3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 162 ? LEU A 163 ? VAL A 290 LEU A 291 AA1 2 GLN A 199 ? GLY A 200 ? GLN A 327 GLY A 328 AA2 1 THR A 186 ? LEU A 189 ? THR A 314 LEU A 317 AA2 2 VAL A 203 ? THR A 208 ? VAL A 331 THR A 336 AA2 3 SER A 271 ? VAL A 281 ? SER A 411 VAL A 421 AA2 4 ARG A 259 ? GLN A 268 ? ARG A 387 GLN A 396 AA2 5 ILE A 232 ? TYR A 234 ? ILE A 360 TYR A 362 AA3 1 TRP A 315 ? ASN A 317 ? TRP A 455 ASN A 457 AA3 2 GLY A 320 ? ASP A 323 ? GLY A 460 ASP A 463 AA3 3 THR A 328 ? PHE A 329 ? THR A 468 PHE A 469 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 162 ? N VAL A 290 O GLY A 200 ? O GLY A 328 AA2 1 2 N THR A 188 ? N THR A 316 O LEU A 206 ? O LEU A 334 AA2 2 3 N ILE A 207 ? N ILE A 335 O VAL A 280 ? O VAL A 420 AA2 3 4 O VAL A 275 ? O VAL A 415 N PHE A 264 ? N PHE A 392 AA2 4 5 O ILE A 263 ? O ILE A 391 N TYR A 234 ? N TYR A 362 AA3 1 2 N TRP A 315 ? N TRP A 455 O PHE A 322 ? O PHE A 462 AA3 2 3 N ASP A 323 ? N ASP A 463 O THR A 328 ? O THR A 468 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 501 ? 6 'binding site for residue MG A 501' AC2 Software A MG 502 ? 5 'binding site for residue MG A 502' AC3 Software A NA 503 ? 6 'binding site for residue NA A 503' AC4 Software A UTP 504 ? 24 'binding site for residue UTP A 504' AC5 Software A EDO 505 ? 8 'binding site for residue EDO A 505' AC6 Software A EDO 506 ? 4 'binding site for residue EDO A 506' AC7 Software A EDO 507 ? 4 'binding site for residue EDO A 507' AC8 Software A EPE 508 ? 5 'binding site for residue EPE A 508' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 202 ? ASP A 330 . ? 1_555 ? 2 AC1 6 ASP A 204 ? ASP A 332 . ? 1_555 ? 3 AC1 6 ASP A 278 ? ASP A 418 . ? 1_555 ? 4 AC1 6 MG F . ? MG A 502 . ? 1_555 ? 5 AC1 6 UTP H . ? UTP A 504 . ? 1_555 ? 6 AC1 6 EDO I . ? EDO A 505 . ? 1_555 ? 7 AC2 5 ASP A 202 ? ASP A 330 . ? 1_555 ? 8 AC2 5 ASP A 204 ? ASP A 332 . ? 1_555 ? 9 AC2 5 MG E . ? MG A 501 . ? 1_555 ? 10 AC2 5 UTP H . ? UTP A 504 . ? 1_555 ? 11 AC2 5 HOH M . ? HOH A 706 . ? 1_555 ? 12 AC3 6 THR A 113 ? THR A 241 . ? 1_555 ? 13 AC3 6 ILE A 115 ? ILE A 243 . ? 1_555 ? 14 AC3 6 VAL A 118 ? VAL A 246 . ? 1_555 ? 15 AC3 6 DT C 3 ? DT P 3 . ? 1_555 ? 16 AC3 6 U C 5 ? U P 5 . ? 1_555 ? 17 AC3 6 HOH O . ? HOH P 107 . ? 1_555 ? 18 AC4 24 GLY A 191 ? GLY A 319 . ? 1_555 ? 19 AC4 24 GLY A 192 ? GLY A 320 . ? 1_555 ? 20 AC4 24 ARG A 195 ? ARG A 323 . ? 1_555 ? 21 AC4 24 LYS A 197 ? LYS A 325 . ? 1_555 ? 22 AC4 24 GLY A 200 ? GLY A 328 . ? 1_555 ? 23 AC4 24 HIS A 201 ? HIS A 329 . ? 1_555 ? 24 AC4 24 ASP A 202 ? ASP A 330 . ? 1_555 ? 25 AC4 24 ASP A 204 ? ASP A 332 . ? 1_555 ? 26 AC4 24 ALA A 293 ? ALA A 433 . ? 1_555 ? 27 AC4 24 TRP A 294 ? TRP A 434 . ? 1_555 ? 28 AC4 24 THR A 295 ? THR A 435 . ? 1_555 ? 29 AC4 24 GLY A 296 ? GLY A 436 . ? 1_555 ? 30 AC4 24 LYS A 298 ? LYS A 438 . ? 1_555 ? 31 AC4 24 MG E . ? MG A 501 . ? 1_555 ? 32 AC4 24 MG F . ? MG A 502 . ? 1_555 ? 33 AC4 24 EDO I . ? EDO A 505 . ? 1_555 ? 34 AC4 24 HOH M . ? HOH A 626 . ? 1_555 ? 35 AC4 24 HOH M . ? HOH A 662 . ? 1_555 ? 36 AC4 24 HOH M . ? HOH A 692 . ? 1_555 ? 37 AC4 24 HOH M . ? HOH A 699 . ? 1_555 ? 38 AC4 24 HOH M . ? HOH A 706 . ? 1_555 ? 39 AC4 24 HOH M . ? HOH A 714 . ? 1_555 ? 40 AC4 24 DA C 4 ? DA P 4 . ? 1_555 ? 41 AC4 24 DA B 5 ? DA T 5 . ? 1_555 ? 42 AC5 8 HIS A 201 ? HIS A 329 . ? 1_555 ? 43 AC5 8 ASP A 202 ? ASP A 330 . ? 1_555 ? 44 AC5 8 ASP A 204 ? ASP A 332 . ? 1_555 ? 45 AC5 8 ASP A 278 ? ASP A 418 . ? 1_555 ? 46 AC5 8 MG E . ? MG A 501 . ? 1_555 ? 47 AC5 8 UTP H . ? UTP A 504 . ? 1_555 ? 48 AC5 8 HOH M . ? HOH A 727 . ? 1_555 ? 49 AC5 8 DA C 4 ? DA P 4 . ? 1_555 ? 50 AC6 4 THR A 66 ? THR A 194 . ? 4_445 ? 51 AC6 4 THR A 186 ? THR A 314 . ? 1_555 ? 52 AC6 4 THR A 208 ? THR A 336 . ? 1_555 ? 53 AC6 4 HOH M . ? HOH A 647 . ? 1_555 ? 54 AC7 4 PRO A 62 ? PRO A 190 . ? 1_555 ? 55 AC7 4 SER A 63 ? SER A 191 . ? 1_555 ? 56 AC7 4 GLN A 70 ? GLN A 198 . ? 1_555 ? 57 AC7 4 HOH M . ? HOH A 607 . ? 1_555 ? 58 AC8 5 LYS A 197 ? LYS A 325 . ? 1_555 ? 59 AC8 5 LEU A 198 ? LEU A 326 . ? 1_555 ? 60 AC8 5 GLN A 199 ? GLN A 327 . ? 1_555 ? 61 AC8 5 HOH M . ? HOH A 636 . ? 1_555 ? 62 AC8 5 HOH M . ? HOH A 654 . ? 1_555 ? # _atom_sites.entry_id 5VZ8 _atom_sites.fract_transf_matrix[1][1] 0.016685 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014486 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009105 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 129 ? ? ? A . n A 1 2 SER 2 130 ? ? ? A . n A 1 3 ALA 3 131 ? ? ? A . n A 1 4 ALA 4 132 ? ? ? A . n A 1 5 ALA 5 133 ? ? ? A . n A 1 6 SER 6 134 ? ? ? A . n A 1 7 PRO 7 135 ? ? ? A . n A 1 8 ALA 8 136 ? ? ? A . n A 1 9 TRP 9 137 ? ? ? A . n A 1 10 MET 10 138 138 MET MET A . n A 1 11 PRO 11 139 139 PRO PRO A . n A 1 12 ALA 12 140 140 ALA ALA A . n A 1 13 TYR 13 141 141 TYR TYR A . n A 1 14 ALA 14 142 142 ALA ALA A . n A 1 15 CYS 15 143 143 CYS CYS A . n A 1 16 GLN 16 144 144 GLN GLN A . n A 1 17 ARG 17 145 145 ARG ARG A . n A 1 18 PRO 18 146 146 PRO PRO A . n A 1 19 THR 19 147 147 THR THR A . n A 1 20 PRO 20 148 148 PRO PRO A . n A 1 21 LEU 21 149 149 LEU LEU A . n A 1 22 THR 22 150 150 THR THR A . n A 1 23 HIS 23 151 151 HIS HIS A . n A 1 24 HIS 24 152 152 HIS HIS A . n A 1 25 ASN 25 153 153 ASN ASN A . n A 1 26 THR 26 154 154 THR THR A . n A 1 27 GLY 27 155 155 GLY GLY A . n A 1 28 LEU 28 156 156 LEU LEU A . n A 1 29 SER 29 157 157 SER SER A . n A 1 30 GLU 30 158 158 GLU GLU A . n A 1 31 ALA 31 159 159 ALA ALA A . n A 1 32 LEU 32 160 160 LEU LEU A . n A 1 33 GLU 33 161 161 GLU GLU A . n A 1 34 ILE 34 162 162 ILE ILE A . n A 1 35 LEU 35 163 163 LEU LEU A . n A 1 36 ALA 36 164 164 ALA ALA A . n A 1 37 GLU 37 165 165 GLU GLU A . n A 1 38 ALA 38 166 166 ALA ALA A . n A 1 39 ALA 39 167 167 ALA ALA A . n A 1 40 GLY 40 168 168 GLY GLY A . n A 1 41 PHE 41 169 169 PHE PHE A . n A 1 42 GLU 42 170 170 GLU GLU A . n A 1 43 GLY 43 171 171 GLY GLY A . n A 1 44 SER 44 172 172 SER SER A . n A 1 45 GLU 45 173 173 GLU GLU A . n A 1 46 GLY 46 174 174 GLY GLY A . n A 1 47 ARG 47 175 175 ARG ARG A . n A 1 48 LEU 48 176 176 LEU LEU A . n A 1 49 LEU 49 177 177 LEU LEU A . n A 1 50 THR 50 178 178 THR THR A . n A 1 51 PHE 51 179 179 PHE PHE A . n A 1 52 CYS 52 180 180 CYS CYS A . n A 1 53 ARG 53 181 181 ARG ARG A . n A 1 54 ALA 54 182 182 ALA ALA A . n A 1 55 ALA 55 183 183 ALA ALA A . n A 1 56 SER 56 184 184 SER SER A . n A 1 57 VAL 57 185 185 VAL VAL A . n A 1 58 LEU 58 186 186 LEU LEU A . n A 1 59 LYS 59 187 187 LYS LYS A . n A 1 60 ALA 60 188 188 ALA ALA A . n A 1 61 LEU 61 189 189 LEU LEU A . n A 1 62 PRO 62 190 190 PRO PRO A . n A 1 63 SER 63 191 191 SER SER A . n A 1 64 PRO 64 192 192 PRO PRO A . n A 1 65 VAL 65 193 193 VAL VAL A . n A 1 66 THR 66 194 194 THR THR A . n A 1 67 THR 67 195 195 THR THR A . n A 1 68 LEU 68 196 196 LEU LEU A . n A 1 69 SER 69 197 197 SER SER A . n A 1 70 GLN 70 198 198 GLN GLN A . n A 1 71 LEU 71 199 199 LEU LEU A . n A 1 72 GLN 72 200 200 GLN GLN A . n A 1 73 GLY 73 201 201 GLY GLY A . n A 1 74 LEU 74 202 202 LEU LEU A . n A 1 75 PRO 75 203 203 PRO PRO A . n A 1 76 HIS 76 204 204 HIS HIS A . n A 1 77 PHE 77 205 205 PHE PHE A . n A 1 78 GLY 78 206 206 GLY GLY A . n A 1 79 GLU 79 207 207 GLU GLU A . n A 1 80 HIS 80 208 208 HIS HIS A . n A 1 81 SER 81 209 209 SER SER A . n A 1 82 SER 82 210 210 SER SER A . n A 1 83 ARG 83 211 211 ARG ARG A . n A 1 84 VAL 84 212 212 VAL VAL A . n A 1 85 VAL 85 213 213 VAL VAL A . n A 1 86 GLN 86 214 214 GLN GLN A . n A 1 87 GLU 87 215 215 GLU GLU A . n A 1 88 LEU 88 216 216 LEU LEU A . n A 1 89 LEU 89 217 217 LEU LEU A . n A 1 90 GLU 90 218 218 GLU GLU A . n A 1 91 HIS 91 219 219 HIS HIS A . n A 1 92 GLY 92 220 220 GLY GLY A . n A 1 93 VAL 93 221 221 VAL VAL A . n A 1 94 CYS 94 222 222 CYS CYS A . n A 1 95 GLU 95 223 223 GLU GLU A . n A 1 96 GLU 96 224 224 GLU GLU A . n A 1 97 VAL 97 225 225 VAL VAL A . n A 1 98 GLU 98 226 226 GLU GLU A . n A 1 99 ARG 99 227 227 ARG ARG A . n A 1 100 VAL 100 228 228 VAL VAL A . n A 1 101 ARG 101 229 229 ARG ARG A . n A 1 102 ARG 102 230 230 ARG ARG A . n A 1 103 SER 103 231 231 SER SER A . n A 1 104 GLU 104 232 232 GLU GLU A . n A 1 105 ARG 105 233 233 ARG ARG A . n A 1 106 TYR 106 234 234 TYR TYR A . n A 1 107 GLN 107 235 235 GLN GLN A . n A 1 108 THR 108 236 236 THR THR A . n A 1 109 MET 109 237 237 MET MET A . n A 1 110 LYS 110 238 238 LYS LYS A . n A 1 111 LEU 111 239 239 LEU LEU A . n A 1 112 PHE 112 240 240 PHE PHE A . n A 1 113 THR 113 241 241 THR THR A . n A 1 114 GLN 114 242 242 GLN GLN A . n A 1 115 ILE 115 243 243 ILE ILE A . n A 1 116 PHE 116 244 244 PHE PHE A . n A 1 117 GLY 117 245 245 GLY GLY A . n A 1 118 VAL 118 246 246 VAL VAL A . n A 1 119 GLY 119 247 247 GLY GLY A . n A 1 120 VAL 120 248 248 VAL VAL A . n A 1 121 LYS 121 249 249 LYS LYS A . n A 1 122 THR 122 250 250 THR THR A . n A 1 123 ALA 123 251 251 ALA ALA A . n A 1 124 ASP 124 252 252 ASP ASP A . n A 1 125 ARG 125 253 253 ARG ARG A . n A 1 126 TRP 126 254 254 TRP TRP A . n A 1 127 TYR 127 255 255 TYR TYR A . n A 1 128 ARG 128 256 256 ARG ARG A . n A 1 129 GLU 129 257 257 GLU GLU A . n A 1 130 GLY 130 258 258 GLY GLY A . n A 1 131 LEU 131 259 259 LEU LEU A . n A 1 132 ARG 132 260 260 ARG ARG A . n A 1 133 THR 133 261 261 THR THR A . n A 1 134 LEU 134 262 262 LEU LEU A . n A 1 135 ASP 135 263 263 ASP ASP A . n A 1 136 ASP 136 264 264 ASP ASP A . n A 1 137 LEU 137 265 265 LEU LEU A . n A 1 138 ARG 138 266 266 ARG ARG A . n A 1 139 GLU 139 267 267 GLU GLU A . n A 1 140 GLN 140 268 268 GLN GLN A . n A 1 141 PRO 141 269 269 PRO PRO A . n A 1 142 GLN 142 270 270 GLN GLN A . n A 1 143 LYS 143 271 271 LYS LYS A . n A 1 144 LEU 144 272 272 LEU LEU A . n A 1 145 THR 145 273 273 THR THR A . n A 1 146 GLN 146 274 274 GLN GLN A . n A 1 147 GLN 147 275 275 GLN GLN A . n A 1 148 GLN 148 276 276 GLN GLN A . n A 1 149 LYS 149 277 277 LYS LYS A . n A 1 150 ALA 150 278 278 ALA ALA A . n A 1 151 GLY 151 279 279 GLY GLY A . n A 1 152 LEU 152 280 280 LEU LEU A . n A 1 153 GLN 153 281 281 GLN GLN A . n A 1 154 HIS 154 282 282 HIS HIS A . n A 1 155 HIS 155 283 283 HIS HIS A . n A 1 156 GLN 156 284 284 GLN GLN A . n A 1 157 ASP 157 285 285 ASP ASP A . n A 1 158 LEU 158 286 286 LEU LEU A . n A 1 159 SER 159 287 287 SER SER A . n A 1 160 THR 160 288 288 THR THR A . n A 1 161 PRO 161 289 289 PRO PRO A . n A 1 162 VAL 162 290 290 VAL VAL A . n A 1 163 LEU 163 291 291 LEU LEU A . n A 1 164 ARG 164 292 292 ARG ARG A . n A 1 165 SER 165 293 293 SER SER A . n A 1 166 ASP 166 294 294 ASP ASP A . n A 1 167 VAL 167 295 295 VAL VAL A . n A 1 168 ASP 168 296 296 ASP ASP A . n A 1 169 ALA 169 297 297 ALA ALA A . n A 1 170 LEU 170 298 298 LEU LEU A . n A 1 171 GLN 171 299 299 GLN GLN A . n A 1 172 GLN 172 300 300 GLN GLN A . n A 1 173 VAL 173 301 301 VAL VAL A . n A 1 174 VAL 174 302 302 VAL VAL A . n A 1 175 GLU 175 303 303 GLU GLU A . n A 1 176 GLU 176 304 304 GLU GLU A . n A 1 177 ALA 177 305 305 ALA ALA A . n A 1 178 VAL 178 306 306 VAL VAL A . n A 1 179 GLY 179 307 307 GLY GLY A . n A 1 180 GLN 180 308 308 GLN GLN A . n A 1 181 ALA 181 309 309 ALA ALA A . n A 1 182 LEU 182 310 310 LEU LEU A . n A 1 183 PRO 183 311 311 PRO PRO A . n A 1 184 GLY 184 312 312 GLY GLY A . n A 1 185 ALA 185 313 313 ALA ALA A . n A 1 186 THR 186 314 314 THR THR A . n A 1 187 VAL 187 315 315 VAL VAL A . n A 1 188 THR 188 316 316 THR THR A . n A 1 189 LEU 189 317 317 LEU LEU A . n A 1 190 THR 190 318 318 THR THR A . n A 1 191 GLY 191 319 319 GLY GLY A . n A 1 192 GLY 192 320 320 GLY GLY A . n A 1 193 PHE 193 321 321 PHE PHE A . n A 1 194 ARG 194 322 322 ARG ARG A . n A 1 195 ARG 195 323 323 ARG ARG A . n A 1 196 GLY 196 324 324 GLY GLY A . n A 1 197 LYS 197 325 325 LYS LYS A . n A 1 198 LEU 198 326 326 LEU LEU A . n A 1 199 GLN 199 327 327 GLN GLN A . n A 1 200 GLY 200 328 328 GLY GLY A . n A 1 201 HIS 201 329 329 HIS HIS A . n A 1 202 ASP 202 330 330 ASP ASP A . n A 1 203 VAL 203 331 331 VAL VAL A . n A 1 204 ASP 204 332 332 ASP ASP A . n A 1 205 PHE 205 333 333 PHE PHE A . n A 1 206 LEU 206 334 334 LEU LEU A . n A 1 207 ILE 207 335 335 ILE ILE A . n A 1 208 THR 208 336 336 THR THR A . n A 1 209 HIS 209 337 337 HIS HIS A . n A 1 210 PRO 210 338 338 PRO PRO A . n A 1 211 LYS 211 339 339 LYS LYS A . n A 1 212 GLU 212 340 340 GLU GLU A . n A 1 213 GLY 213 341 341 GLY GLY A . n A 1 214 GLN 214 342 342 GLN GLN A . n A 1 215 GLU 215 343 343 GLU GLU A . n A 1 216 ALA 216 344 344 ALA ALA A . n A 1 217 GLY 217 345 345 GLY GLY A . n A 1 218 LEU 218 346 346 LEU LEU A . n A 1 219 LEU 219 347 347 LEU LEU A . n A 1 220 PRO 220 348 348 PRO PRO A . n A 1 221 ARG 221 349 349 ARG ARG A . n A 1 222 VAL 222 350 350 VAL VAL A . n A 1 223 MET 223 351 351 MET MET A . n A 1 224 CYS 224 352 352 CYS CYS A . n A 1 225 ARG 225 353 353 ARG ARG A . n A 1 226 LEU 226 354 354 LEU LEU A . n A 1 227 GLN 227 355 355 GLN GLN A . n A 1 228 ASP 228 356 356 ASP ASP A . n A 1 229 GLN 229 357 357 GLN GLN A . n A 1 230 GLY 230 358 358 GLY GLY A . n A 1 231 LEU 231 359 359 LEU LEU A . n A 1 232 ILE 232 360 360 ILE ILE A . n A 1 233 LEU 233 361 361 LEU LEU A . n A 1 234 TYR 234 362 362 TYR TYR A . n A 1 235 HIS 235 363 363 HIS HIS A . n A 1 236 GLN 236 364 364 GLN GLN A . n A 1 237 HIS 237 365 365 HIS HIS A . n A 1 238 GLN 238 366 ? ? ? A . n A 1 239 HIS 239 367 ? ? ? A . n A 1 240 SER 240 368 ? ? ? A . n A 1 241 CYS 241 369 ? ? ? A . n A 1 242 CYS 242 370 ? ? ? A . n A 1 243 GLU 243 371 ? ? ? A . n A 1 244 SER 244 372 ? ? ? A . n A 1 245 PRO 245 373 ? ? ? A . n A 1 246 THR 246 374 ? ? ? A . n A 1 247 ARG 247 375 ? ? ? A . n A 1 248 LEU 248 376 ? ? ? A . n A 1 249 ALA 249 377 ? ? ? A . n A 1 250 GLN 250 378 ? ? ? A . n A 1 251 GLN 251 379 ? ? ? A . n A 1 252 SER 252 380 ? ? ? A . n A 1 253 HIS 253 381 ? ? ? A . n A 1 254 MET 254 382 ? ? ? A . n A 1 255 ASP 255 383 ? ? ? A . n A 1 256 ALA 256 384 384 ALA ALA A . n A 1 257 PHE 257 385 385 PHE PHE A . n A 1 258 GLU 258 386 386 GLU GLU A . n A 1 259 ARG 259 387 387 ARG ARG A . n A 1 260 SER 260 388 388 SER SER A . n A 1 261 PHE 261 389 389 PHE PHE A . n A 1 262 CYS 262 390 390 CYS CYS A . n A 1 263 ILE 263 391 391 ILE ILE A . n A 1 264 PHE 264 392 392 PHE PHE A . n A 1 265 ARG 265 393 393 ARG ARG A . n A 1 266 LEU 266 394 394 LEU LEU A . n A 1 267 PRO 267 395 395 PRO PRO A . n A 1 268 GLN 268 396 396 GLN GLN A . n A 1 269 PRO 269 397 397 PRO PRO A . n A 1 270 GLY 270 410 410 GLY GLY A . n A 1 271 SER 271 411 411 SER SER A . n A 1 272 TRP 272 412 412 TRP TRP A . n A 1 273 LYS 273 413 413 LYS LYS A . n A 1 274 ALA 274 414 414 ALA ALA A . n A 1 275 VAL 275 415 415 VAL VAL A . n A 1 276 ARG 276 416 416 ARG ARG A . n A 1 277 VAL 277 417 417 VAL VAL A . n A 1 278 ASP 278 418 418 ASP ASP A . n A 1 279 LEU 279 419 419 LEU LEU A . n A 1 280 VAL 280 420 420 VAL VAL A . n A 1 281 VAL 281 421 421 VAL VAL A . n A 1 282 ALA 282 422 422 ALA ALA A . n A 1 283 PRO 283 423 423 PRO PRO A . n A 1 284 VAL 284 424 424 VAL VAL A . n A 1 285 SER 285 425 425 SER SER A . n A 1 286 GLN 286 426 426 GLN GLN A . n A 1 287 PHE 287 427 427 PHE PHE A . n A 1 288 PRO 288 428 428 PRO PRO A . n A 1 289 PHE 289 429 429 PHE PHE A . n A 1 290 ALA 290 430 430 ALA ALA A . n A 1 291 LEU 291 431 431 LEU LEU A . n A 1 292 LEU 292 432 432 LEU LEU A . n A 1 293 ALA 293 433 433 ALA ALA A . n A 1 294 TRP 294 434 434 TRP TRP A . n A 1 295 THR 295 435 435 THR THR A . n A 1 296 GLY 296 436 436 GLY GLY A . n A 1 297 SER 297 437 437 SER SER A . n A 1 298 LYS 298 438 438 LYS LYS A . n A 1 299 LEU 299 439 439 LEU LEU A . n A 1 300 PHE 300 440 440 PHE PHE A . n A 1 301 GLN 301 441 441 GLN GLN A . n A 1 302 ARG 302 442 442 ARG ARG A . n A 1 303 GLU 303 443 443 GLU GLU A . n A 1 304 LEU 304 444 444 LEU LEU A . n A 1 305 ARG 305 445 445 ARG ARG A . n A 1 306 ARG 306 446 446 ARG ARG A . n A 1 307 PHE 307 447 447 PHE PHE A . n A 1 308 SER 308 448 448 SER SER A . n A 1 309 ARG 309 449 449 ARG ARG A . n A 1 310 LYS 310 450 450 LYS LYS A . n A 1 311 GLU 311 451 451 GLU GLU A . n A 1 312 LYS 312 452 452 LYS LYS A . n A 1 313 GLY 313 453 453 GLY GLY A . n A 1 314 LEU 314 454 454 LEU LEU A . n A 1 315 TRP 315 455 455 TRP TRP A . n A 1 316 LEU 316 456 456 LEU LEU A . n A 1 317 ASN 317 457 457 ASN ASN A . n A 1 318 SER 318 458 458 SER SER A . n A 1 319 HIS 319 459 459 HIS HIS A . n A 1 320 GLY 320 460 460 GLY GLY A . n A 1 321 LEU 321 461 461 LEU LEU A . n A 1 322 PHE 322 462 462 PHE PHE A . n A 1 323 ASP 323 463 463 ASP ASP A . n A 1 324 PRO 324 464 464 PRO PRO A . n A 1 325 GLU 325 465 465 GLU GLU A . n A 1 326 GLN 326 466 466 GLN GLN A . n A 1 327 LYS 327 467 467 LYS LYS A . n A 1 328 THR 328 468 468 THR THR A . n A 1 329 PHE 329 469 469 PHE PHE A . n A 1 330 PHE 330 470 470 PHE PHE A . n A 1 331 GLN 331 471 471 GLN GLN A . n A 1 332 ALA 332 472 472 ALA ALA A . n A 1 333 ALA 333 473 473 ALA ALA A . n A 1 334 SER 334 474 474 SER SER A . n A 1 335 GLU 335 475 475 GLU GLU A . n A 1 336 GLU 336 476 476 GLU GLU A . n A 1 337 ASP 337 477 477 ASP ASP A . n A 1 338 ILE 338 478 478 ILE ILE A . n A 1 339 PHE 339 479 479 PHE PHE A . n A 1 340 ARG 340 480 480 ARG ARG A . n A 1 341 HIS 341 481 481 HIS HIS A . n A 1 342 LEU 342 482 482 LEU LEU A . n A 1 343 GLY 343 483 483 GLY GLY A . n A 1 344 LEU 344 484 484 LEU LEU A . n A 1 345 GLU 345 485 485 GLU GLU A . n A 1 346 TYR 346 486 486 TYR TYR A . n A 1 347 LEU 347 487 487 LEU LEU A . n A 1 348 PRO 348 488 488 PRO PRO A . n A 1 349 PRO 349 489 489 PRO PRO A . n A 1 350 GLU 350 490 490 GLU GLU A . n A 1 351 GLN 351 491 491 GLN GLN A . n A 1 352 ARG 352 492 492 ARG ARG A . n A 1 353 ASN 353 493 493 ASN ASN A . n A 1 354 ALA 354 494 494 ALA ALA A . n B 2 1 DC 1 1 1 DC DC T . n B 2 2 DG 2 2 2 DG DG T . n B 2 3 DG 3 3 3 DG DG T . n B 2 4 DC 4 4 4 DC DC T . n B 2 5 DA 5 5 5 DA DA T . n B 2 6 DT 6 6 6 DT DT T . n B 2 7 DA 7 7 7 DA DA T . n B 2 8 DC 8 8 8 DC DC T . n B 2 9 DG 9 9 9 DG DG T . n C 3 1 DC 1 1 1 DC DC P . n C 3 2 DG 2 2 2 DG DG P . n C 3 3 DT 3 3 3 DT DT P . n C 3 4 DA 4 4 4 DA DA P . n C 3 5 U 5 5 5 U U P . n D 4 1 DG 1 1 1 DG DG D . n D 4 2 DC 2 2 2 DC DC D . n D 4 3 DC 3 3 3 DC DC D . n D 4 4 DG 4 4 4 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 501 1 MG MG A . F 5 MG 1 502 2 MG MG A . G 6 NA 1 503 3 NA NA A . H 7 UTP 1 504 701 UTP UTP A . I 8 EDO 1 505 1 EDO EDO A . J 8 EDO 1 506 2 EDO EDO A . K 8 EDO 1 507 3 EDO EDO A . L 9 EPE 1 508 1 EPE EPE A . M 10 HOH 1 601 123 HOH HOH A . M 10 HOH 2 602 170 HOH HOH A . M 10 HOH 3 603 250 HOH HOH A . M 10 HOH 4 604 236 HOH HOH A . M 10 HOH 5 605 273 HOH HOH A . M 10 HOH 6 606 374 HOH HOH A . M 10 HOH 7 607 403 HOH HOH A . M 10 HOH 8 608 461 HOH HOH A . M 10 HOH 9 609 190 HOH HOH A . M 10 HOH 10 610 451 HOH HOH A . M 10 HOH 11 611 78 HOH HOH A . M 10 HOH 12 612 77 HOH HOH A . M 10 HOH 13 613 296 HOH HOH A . M 10 HOH 14 614 12 HOH HOH A . M 10 HOH 15 615 90 HOH HOH A . M 10 HOH 16 616 220 HOH HOH A . M 10 HOH 17 617 304 HOH HOH A . M 10 HOH 18 618 195 HOH HOH A . M 10 HOH 19 619 207 HOH HOH A . M 10 HOH 20 620 291 HOH HOH A . M 10 HOH 21 621 124 HOH HOH A . M 10 HOH 22 622 384 HOH HOH A . M 10 HOH 23 623 59 HOH HOH A . M 10 HOH 24 624 239 HOH HOH A . M 10 HOH 25 625 335 HOH HOH A . M 10 HOH 26 626 160 HOH HOH A . M 10 HOH 27 627 411 HOH HOH A . M 10 HOH 28 628 312 HOH HOH A . M 10 HOH 29 629 294 HOH HOH A . M 10 HOH 30 630 98 HOH HOH A . M 10 HOH 31 631 157 HOH HOH A . M 10 HOH 32 632 42 HOH HOH A . M 10 HOH 33 633 215 HOH HOH A . M 10 HOH 34 634 44 HOH HOH A . M 10 HOH 35 635 171 HOH HOH A . M 10 HOH 36 636 252 HOH HOH A . M 10 HOH 37 637 126 HOH HOH A . M 10 HOH 38 638 159 HOH HOH A . M 10 HOH 39 639 297 HOH HOH A . M 10 HOH 40 640 162 HOH HOH A . M 10 HOH 41 641 70 HOH HOH A . M 10 HOH 42 642 208 HOH HOH A . M 10 HOH 43 643 127 HOH HOH A . M 10 HOH 44 644 84 HOH HOH A . M 10 HOH 45 645 39 HOH HOH A . M 10 HOH 46 646 53 HOH HOH A . M 10 HOH 47 647 444 HOH HOH A . M 10 HOH 48 648 210 HOH HOH A . M 10 HOH 49 649 50 HOH HOH A . M 10 HOH 50 650 20 HOH HOH A . M 10 HOH 51 651 183 HOH HOH A . M 10 HOH 52 652 73 HOH HOH A . M 10 HOH 53 653 158 HOH HOH A . M 10 HOH 54 654 217 HOH HOH A . M 10 HOH 55 655 19 HOH HOH A . M 10 HOH 56 656 118 HOH HOH A . M 10 HOH 57 657 87 HOH HOH A . M 10 HOH 58 658 358 HOH HOH A . M 10 HOH 59 659 72 HOH HOH A . M 10 HOH 60 660 22 HOH HOH A . M 10 HOH 61 661 154 HOH HOH A . M 10 HOH 62 662 17 HOH HOH A . M 10 HOH 63 663 299 HOH HOH A . M 10 HOH 64 664 345 HOH HOH A . M 10 HOH 65 665 113 HOH HOH A . M 10 HOH 66 666 36 HOH HOH A . M 10 HOH 67 667 86 HOH HOH A . M 10 HOH 68 668 4 HOH HOH A . M 10 HOH 69 669 24 HOH HOH A . M 10 HOH 70 670 47 HOH HOH A . M 10 HOH 71 671 8 HOH HOH A . M 10 HOH 72 672 74 HOH HOH A . M 10 HOH 73 673 61 HOH HOH A . M 10 HOH 74 674 148 HOH HOH A . M 10 HOH 75 675 89 HOH HOH A . M 10 HOH 76 676 180 HOH HOH A . M 10 HOH 77 677 125 HOH HOH A . M 10 HOH 78 678 11 HOH HOH A . M 10 HOH 79 679 209 HOH HOH A . M 10 HOH 80 680 238 HOH HOH A . M 10 HOH 81 681 1 HOH HOH A . M 10 HOH 82 682 28 HOH HOH A . M 10 HOH 83 683 34 HOH HOH A . M 10 HOH 84 684 357 HOH HOH A . M 10 HOH 85 685 188 HOH HOH A . M 10 HOH 86 686 198 HOH HOH A . M 10 HOH 87 687 76 HOH HOH A . M 10 HOH 88 688 146 HOH HOH A . M 10 HOH 89 689 264 HOH HOH A . M 10 HOH 90 690 254 HOH HOH A . M 10 HOH 91 691 221 HOH HOH A . M 10 HOH 92 692 75 HOH HOH A . M 10 HOH 93 693 192 HOH HOH A . M 10 HOH 94 694 143 HOH HOH A . M 10 HOH 95 695 191 HOH HOH A . M 10 HOH 96 696 2 HOH HOH A . M 10 HOH 97 697 274 HOH HOH A . M 10 HOH 98 698 5 HOH HOH A . M 10 HOH 99 699 182 HOH HOH A . M 10 HOH 100 700 57 HOH HOH A . M 10 HOH 101 701 223 HOH HOH A . M 10 HOH 102 702 10 HOH HOH A . M 10 HOH 103 703 29 HOH HOH A . M 10 HOH 104 704 63 HOH HOH A . M 10 HOH 105 705 174 HOH HOH A . M 10 HOH 106 706 3 HOH HOH A . M 10 HOH 107 707 32 HOH HOH A . M 10 HOH 108 708 16 HOH HOH A . M 10 HOH 109 709 54 HOH HOH A . M 10 HOH 110 710 88 HOH HOH A . M 10 HOH 111 711 52 HOH HOH A . M 10 HOH 112 712 151 HOH HOH A . M 10 HOH 113 713 295 HOH HOH A . M 10 HOH 114 714 13 HOH HOH A . M 10 HOH 115 715 137 HOH HOH A . M 10 HOH 116 716 41 HOH HOH A . M 10 HOH 117 717 197 HOH HOH A . M 10 HOH 118 718 64 HOH HOH A . M 10 HOH 119 719 287 HOH HOH A . M 10 HOH 120 720 25 HOH HOH A . M 10 HOH 121 721 37 HOH HOH A . M 10 HOH 122 722 306 HOH HOH A . M 10 HOH 123 723 150 HOH HOH A . M 10 HOH 124 724 21 HOH HOH A . M 10 HOH 125 725 83 HOH HOH A . M 10 HOH 126 726 149 HOH HOH A . M 10 HOH 127 727 109 HOH HOH A . M 10 HOH 128 728 60 HOH HOH A . M 10 HOH 129 729 456 HOH HOH A . M 10 HOH 130 730 48 HOH HOH A . M 10 HOH 131 731 452 HOH HOH A . M 10 HOH 132 732 122 HOH HOH A . M 10 HOH 133 733 58 HOH HOH A . M 10 HOH 134 734 153 HOH HOH A . M 10 HOH 135 735 235 HOH HOH A . M 10 HOH 136 736 18 HOH HOH A . M 10 HOH 137 737 211 HOH HOH A . M 10 HOH 138 738 166 HOH HOH A . M 10 HOH 139 739 214 HOH HOH A . M 10 HOH 140 740 67 HOH HOH A . M 10 HOH 141 741 49 HOH HOH A . M 10 HOH 142 742 46 HOH HOH A . M 10 HOH 143 743 156 HOH HOH A . M 10 HOH 144 744 282 HOH HOH A . M 10 HOH 145 745 71 HOH HOH A . M 10 HOH 146 746 416 HOH HOH A . M 10 HOH 147 747 164 HOH HOH A . M 10 HOH 148 748 206 HOH HOH A . M 10 HOH 149 749 55 HOH HOH A . M 10 HOH 150 750 104 HOH HOH A . M 10 HOH 151 751 111 HOH HOH A . M 10 HOH 152 752 40 HOH HOH A . M 10 HOH 153 753 226 HOH HOH A . M 10 HOH 154 754 38 HOH HOH A . M 10 HOH 155 755 240 HOH HOH A . M 10 HOH 156 756 147 HOH HOH A . M 10 HOH 157 757 26 HOH HOH A . M 10 HOH 158 758 189 HOH HOH A . M 10 HOH 159 759 323 HOH HOH A . M 10 HOH 160 760 35 HOH HOH A . M 10 HOH 161 761 300 HOH HOH A . M 10 HOH 162 762 201 HOH HOH A . M 10 HOH 163 763 257 HOH HOH A . M 10 HOH 164 764 121 HOH HOH A . M 10 HOH 165 765 68 HOH HOH A . M 10 HOH 166 766 43 HOH HOH A . M 10 HOH 167 767 80 HOH HOH A . M 10 HOH 168 768 106 HOH HOH A . M 10 HOH 169 769 341 HOH HOH A . M 10 HOH 170 770 415 HOH HOH A . M 10 HOH 171 771 281 HOH HOH A . M 10 HOH 172 772 186 HOH HOH A . M 10 HOH 173 773 228 HOH HOH A . M 10 HOH 174 774 449 HOH HOH A . M 10 HOH 175 775 66 HOH HOH A . M 10 HOH 176 776 261 HOH HOH A . M 10 HOH 177 777 426 HOH HOH A . M 10 HOH 178 778 247 HOH HOH A . M 10 HOH 179 779 103 HOH HOH A . M 10 HOH 180 780 144 HOH HOH A . M 10 HOH 181 781 340 HOH HOH A . M 10 HOH 182 782 283 HOH HOH A . M 10 HOH 183 783 313 HOH HOH A . M 10 HOH 184 784 130 HOH HOH A . M 10 HOH 185 785 82 HOH HOH A . M 10 HOH 186 786 242 HOH HOH A . M 10 HOH 187 787 303 HOH HOH A . M 10 HOH 188 788 168 HOH HOH A . M 10 HOH 189 789 141 HOH HOH A . M 10 HOH 190 790 243 HOH HOH A . M 10 HOH 191 791 262 HOH HOH A . M 10 HOH 192 792 131 HOH HOH A . M 10 HOH 193 793 459 HOH HOH A . M 10 HOH 194 794 175 HOH HOH A . M 10 HOH 195 795 56 HOH HOH A . M 10 HOH 196 796 204 HOH HOH A . M 10 HOH 197 797 100 HOH HOH A . M 10 HOH 198 798 95 HOH HOH A . M 10 HOH 199 799 15 HOH HOH A . M 10 HOH 200 800 362 HOH HOH A . M 10 HOH 201 801 460 HOH HOH A . M 10 HOH 202 802 224 HOH HOH A . M 10 HOH 203 803 346 HOH HOH A . M 10 HOH 204 804 310 HOH HOH A . M 10 HOH 205 805 412 HOH HOH A . M 10 HOH 206 806 447 HOH HOH A . M 10 HOH 207 807 129 HOH HOH A . M 10 HOH 208 808 388 HOH HOH A . M 10 HOH 209 809 321 HOH HOH A . M 10 HOH 210 810 302 HOH HOH A . M 10 HOH 211 811 326 HOH HOH A . M 10 HOH 212 812 367 HOH HOH A . M 10 HOH 213 813 232 HOH HOH A . M 10 HOH 214 814 450 HOH HOH A . M 10 HOH 215 815 234 HOH HOH A . M 10 HOH 216 816 114 HOH HOH A . M 10 HOH 217 817 408 HOH HOH A . M 10 HOH 218 818 200 HOH HOH A . M 10 HOH 219 819 342 HOH HOH A . M 10 HOH 220 820 79 HOH HOH A . M 10 HOH 221 821 440 HOH HOH A . M 10 HOH 222 822 348 HOH HOH A . M 10 HOH 223 823 142 HOH HOH A . M 10 HOH 224 824 413 HOH HOH A . M 10 HOH 225 825 290 HOH HOH A . M 10 HOH 226 826 216 HOH HOH A . M 10 HOH 227 827 298 HOH HOH A . M 10 HOH 228 828 119 HOH HOH A . M 10 HOH 229 829 405 HOH HOH A . M 10 HOH 230 830 425 HOH HOH A . M 10 HOH 231 831 65 HOH HOH A . M 10 HOH 232 832 396 HOH HOH A . M 10 HOH 233 833 116 HOH HOH A . M 10 HOH 234 834 430 HOH HOH A . M 10 HOH 235 835 380 HOH HOH A . M 10 HOH 236 836 112 HOH HOH A . M 10 HOH 237 837 187 HOH HOH A . M 10 HOH 238 838 266 HOH HOH A . M 10 HOH 239 839 417 HOH HOH A . M 10 HOH 240 840 102 HOH HOH A . M 10 HOH 241 841 350 HOH HOH A . M 10 HOH 242 842 237 HOH HOH A . M 10 HOH 243 843 277 HOH HOH A . M 10 HOH 244 844 438 HOH HOH A . M 10 HOH 245 845 308 HOH HOH A . M 10 HOH 246 846 404 HOH HOH A . M 10 HOH 247 847 218 HOH HOH A . M 10 HOH 248 848 359 HOH HOH A . M 10 HOH 249 849 152 HOH HOH A . M 10 HOH 250 850 267 HOH HOH A . M 10 HOH 251 851 241 HOH HOH A . M 10 HOH 252 852 339 HOH HOH A . M 10 HOH 253 853 458 HOH HOH A . M 10 HOH 254 854 155 HOH HOH A . M 10 HOH 255 855 385 HOH HOH A . M 10 HOH 256 856 361 HOH HOH A . M 10 HOH 257 857 363 HOH HOH A . M 10 HOH 258 858 117 HOH HOH A . M 10 HOH 259 859 279 HOH HOH A . M 10 HOH 260 860 231 HOH HOH A . M 10 HOH 261 861 230 HOH HOH A . M 10 HOH 262 862 337 HOH HOH A . M 10 HOH 263 863 455 HOH HOH A . M 10 HOH 264 864 406 HOH HOH A . M 10 HOH 265 865 140 HOH HOH A . M 10 HOH 266 866 392 HOH HOH A . M 10 HOH 267 867 222 HOH HOH A . M 10 HOH 268 868 322 HOH HOH A . M 10 HOH 269 869 443 HOH HOH A . M 10 HOH 270 870 289 HOH HOH A . M 10 HOH 271 871 145 HOH HOH A . M 10 HOH 272 872 325 HOH HOH A . M 10 HOH 273 873 429 HOH HOH A . M 10 HOH 274 874 185 HOH HOH A . M 10 HOH 275 875 390 HOH HOH A . M 10 HOH 276 876 370 HOH HOH A . M 10 HOH 277 877 327 HOH HOH A . M 10 HOH 278 878 344 HOH HOH A . M 10 HOH 279 879 457 HOH HOH A . M 10 HOH 280 880 248 HOH HOH A . M 10 HOH 281 881 332 HOH HOH A . M 10 HOH 282 882 245 HOH HOH A . M 10 HOH 283 883 366 HOH HOH A . N 10 HOH 1 101 375 HOH HOH T . N 10 HOH 2 102 184 HOH HOH T . N 10 HOH 3 103 193 HOH HOH T . N 10 HOH 4 104 163 HOH HOH T . N 10 HOH 5 105 409 HOH HOH T . N 10 HOH 6 106 81 HOH HOH T . N 10 HOH 7 107 62 HOH HOH T . N 10 HOH 8 108 179 HOH HOH T . N 10 HOH 9 109 45 HOH HOH T . N 10 HOH 10 110 181 HOH HOH T . N 10 HOH 11 111 85 HOH HOH T . N 10 HOH 12 112 311 HOH HOH T . N 10 HOH 13 113 136 HOH HOH T . N 10 HOH 14 114 172 HOH HOH T . N 10 HOH 15 115 23 HOH HOH T . N 10 HOH 16 116 317 HOH HOH T . N 10 HOH 17 117 14 HOH HOH T . N 10 HOH 18 118 196 HOH HOH T . N 10 HOH 19 119 397 HOH HOH T . N 10 HOH 20 120 161 HOH HOH T . N 10 HOH 21 121 229 HOH HOH T . N 10 HOH 22 122 389 HOH HOH T . N 10 HOH 23 123 138 HOH HOH T . N 10 HOH 24 124 177 HOH HOH T . N 10 HOH 25 125 268 HOH HOH T . N 10 HOH 26 126 167 HOH HOH T . N 10 HOH 27 127 169 HOH HOH T . N 10 HOH 28 128 97 HOH HOH T . N 10 HOH 29 129 271 HOH HOH T . N 10 HOH 30 130 284 HOH HOH T . N 10 HOH 31 131 178 HOH HOH T . N 10 HOH 32 132 205 HOH HOH T . N 10 HOH 33 133 101 HOH HOH T . N 10 HOH 34 134 365 HOH HOH T . N 10 HOH 35 135 453 HOH HOH T . N 10 HOH 36 136 328 HOH HOH T . N 10 HOH 37 137 356 HOH HOH T . N 10 HOH 38 138 391 HOH HOH T . N 10 HOH 39 139 330 HOH HOH T . N 10 HOH 40 140 386 HOH HOH T . O 10 HOH 1 101 249 HOH HOH P . O 10 HOH 2 102 110 HOH HOH P . O 10 HOH 3 103 69 HOH HOH P . O 10 HOH 4 104 115 HOH HOH P . O 10 HOH 5 105 203 HOH HOH P . O 10 HOH 6 106 259 HOH HOH P . O 10 HOH 7 107 30 HOH HOH P . O 10 HOH 8 108 51 HOH HOH P . O 10 HOH 9 109 107 HOH HOH P . O 10 HOH 10 110 92 HOH HOH P . O 10 HOH 11 111 27 HOH HOH P . O 10 HOH 12 112 316 HOH HOH P . O 10 HOH 13 113 336 HOH HOH P . O 10 HOH 14 114 255 HOH HOH P . O 10 HOH 15 115 94 HOH HOH P . O 10 HOH 16 116 278 HOH HOH P . P 10 HOH 1 101 173 HOH HOH D . P 10 HOH 2 102 219 HOH HOH D . P 10 HOH 3 103 199 HOH HOH D . P 10 HOH 4 104 128 HOH HOH D . P 10 HOH 5 105 315 HOH HOH D . P 10 HOH 6 106 194 HOH HOH D . P 10 HOH 7 107 132 HOH HOH D . P 10 HOH 8 108 347 HOH HOH D . P 10 HOH 9 109 213 HOH HOH D . P 10 HOH 10 110 253 HOH HOH D . P 10 HOH 11 111 376 HOH HOH D . P 10 HOH 12 112 399 HOH HOH D . P 10 HOH 13 113 91 HOH HOH D . P 10 HOH 14 114 93 HOH HOH D . P 10 HOH 15 115 176 HOH HOH D . P 10 HOH 16 116 442 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A THR 113 ? A THR 241 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? A ILE 115 ? A ILE 243 ? 1_555 87.8 ? 2 O ? A THR 113 ? A THR 241 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? A VAL 118 ? A VAL 246 ? 1_555 89.2 ? 3 O ? A ILE 115 ? A ILE 243 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? A VAL 118 ? A VAL 246 ? 1_555 89.5 ? 4 O ? A THR 113 ? A THR 241 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C DT 3 ? P DT 3 ? 1_555 177.8 ? 5 O ? A ILE 115 ? A ILE 243 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C DT 3 ? P DT 3 ? 1_555 91.1 ? 6 O ? A VAL 118 ? A VAL 246 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C DT 3 ? P DT 3 ? 1_555 88.9 ? 7 O ? A THR 113 ? A THR 241 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C U 5 ? P U 5 ? 1_555 84.1 ? 8 O ? A ILE 115 ? A ILE 243 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C U 5 ? P U 5 ? 1_555 170.5 ? 9 O ? A VAL 118 ? A VAL 246 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C U 5 ? P U 5 ? 1_555 95.3 ? 10 OP1 ? C DT 3 ? P DT 3 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 OP1 ? C U 5 ? P U 5 ? 1_555 97.1 ? 11 O ? A THR 113 ? A THR 241 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? O HOH . ? P HOH 107 ? 1_555 98.5 ? 12 O ? A ILE 115 ? A ILE 243 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? O HOH . ? P HOH 107 ? 1_555 91.2 ? 13 O ? A VAL 118 ? A VAL 246 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? O HOH . ? P HOH 107 ? 1_555 172.3 ? 14 OP1 ? C DT 3 ? P DT 3 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? O HOH . ? P HOH 107 ? 1_555 83.5 ? 15 OP1 ? C U 5 ? P U 5 ? 1_555 NA ? G NA . ? A NA 503 ? 1_555 O ? O HOH . ? P HOH 107 ? 1_555 85.0 ? 16 OD2 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OD1 ? A ASP 204 ? A ASP 332 ? 1_555 102.9 ? 17 OD2 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OD2 ? A ASP 278 ? A ASP 418 ? 1_555 88.9 ? 18 OD1 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OD2 ? A ASP 278 ? A ASP 418 ? 1_555 97.9 ? 19 OD2 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2A ? H UTP . ? A UTP 504 ? 1_555 88.2 ? 20 OD1 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2A ? H UTP . ? A UTP 504 ? 1_555 91.0 ? 21 OD2 ? A ASP 278 ? A ASP 418 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2A ? H UTP . ? A UTP 504 ? 1_555 171.1 ? 22 OD2 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O1 ? I EDO . ? A EDO 505 ? 1_555 95.0 ? 23 OD1 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O1 ? I EDO . ? A EDO 505 ? 1_555 162.0 ? 24 OD2 ? A ASP 278 ? A ASP 418 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O1 ? I EDO . ? A EDO 505 ? 1_555 83.9 ? 25 O2A ? H UTP . ? A UTP 504 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O1 ? I EDO . ? A EDO 505 ? 1_555 88.0 ? 26 OD2 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2 ? I EDO . ? A EDO 505 ? 1_555 169.2 ? 27 OD1 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2 ? I EDO . ? A EDO 505 ? 1_555 87.2 ? 28 OD2 ? A ASP 278 ? A ASP 418 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2 ? I EDO . ? A EDO 505 ? 1_555 85.9 ? 29 O2A ? H UTP . ? A UTP 504 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2 ? I EDO . ? A EDO 505 ? 1_555 95.5 ? 30 O1 ? I EDO . ? A EDO 505 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O2 ? I EDO . ? A EDO 505 ? 1_555 75.1 ? 31 OD1 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 OD2 ? A ASP 204 ? A ASP 332 ? 1_555 94.6 ? 32 OD1 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O2A ? H UTP . ? A UTP 504 ? 1_555 93.1 ? 33 OD2 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O2A ? H UTP . ? A UTP 504 ? 1_555 89.2 ? 34 OD1 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1B ? H UTP . ? A UTP 504 ? 1_555 172.9 ? 35 OD2 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1B ? H UTP . ? A UTP 504 ? 1_555 91.9 ? 36 O2A ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1B ? H UTP . ? A UTP 504 ? 1_555 90.0 ? 37 OD1 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1G ? H UTP . ? A UTP 504 ? 1_555 87.9 ? 38 OD2 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1G ? H UTP . ? A UTP 504 ? 1_555 176.5 ? 39 O2A ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1G ? H UTP . ? A UTP 504 ? 1_555 93.1 ? 40 O1B ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O1G ? H UTP . ? A UTP 504 ? 1_555 85.5 ? 41 OD1 ? A ASP 202 ? A ASP 330 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 706 ? 1_555 86.5 ? 42 OD2 ? A ASP 204 ? A ASP 332 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 706 ? 1_555 88.3 ? 43 O2A ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 706 ? 1_555 177.4 ? 44 O1B ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 706 ? 1_555 90.7 ? 45 O1G ? H UTP . ? A UTP 504 ? 1_555 MG ? F MG . ? A MG 502 ? 1_555 O ? M HOH . ? A HOH 706 ? 1_555 89.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-07-05 2 'Structure model' 1 1 2017-09-20 3 'Structure model' 1 2 2017-09-27 4 'Structure model' 1 3 2019-12-04 5 'Structure model' 1 4 2023-10-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' citation 3 4 'Structure model' pdbx_audit_support 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' database_2 7 5 'Structure model' pdbx_initial_refinement_model 8 5 'Structure model' pdbx_struct_conn_angle 9 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation.pdbx_database_id_PubMed' 6 3 'Structure model' '_citation.title' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.value' 25 5 'Structure model' '_struct_conn.pdbx_dist_value' 26 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 12.8518 -18.6154 -14.5333 0.1117 0.0927 0.0774 0.0852 -0.0061 -0.0547 0.6372 0.5278 0.8544 0.0822 0.4093 -0.4311 0.0350 0.3756 -0.2646 -0.1335 -0.1495 -0.1676 0.2499 0.3649 -0.2997 'X-RAY DIFFRACTION' 2 ? refined 17.1052 8.0290 -16.9497 -0.0878 0.1045 0.1218 -0.1209 0.2833 0.1767 0.0361 0.2063 0.2610 -0.0261 0.0405 0.1295 0.0823 0.2675 0.1924 -0.2641 -0.0450 -0.3360 -0.2321 0.2157 -0.0458 'X-RAY DIFFRACTION' 3 ? refined -2.0717 8.6879 -0.6475 0.0268 -0.0193 0.0928 -0.0117 0.0441 -0.0559 1.8493 0.5829 0.6134 -0.4196 0.2230 -0.5292 0.1403 -0.2525 0.7157 0.2533 -0.1808 -0.1943 -0.3174 -0.0704 -0.1483 'X-RAY DIFFRACTION' 4 ? refined -11.1291 -10.3979 -11.4278 0.0407 0.0568 0.0353 0.0095 -0.0239 -0.0357 1.0398 0.9942 0.4764 -0.3438 -0.5897 -0.0753 0.0544 0.4084 -0.2177 -0.1231 -0.0667 0.2256 0.0694 -0.2080 0.2224 'X-RAY DIFFRACTION' 5 ? refined 0.5633 -8.8002 -23.3007 0.1419 0.1594 -0.2767 0.0415 -0.0423 0.0158 0.5632 0.2714 0.0705 -0.1122 0.0265 -0.1075 0.0681 0.6496 -0.4894 -0.3672 -0.0243 0.0587 0.0468 -0.0532 0.1867 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'chain A and resid 138:231' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'chain A and resid 232:289' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'chain A and resid 290:423' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? 'chain A and resid 424:494' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? 'chain T or chain P or chain D' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 145 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 601 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.11 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 838 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 841 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 4_455 _pdbx_validate_symm_contact.dist 2.05 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" T DC 1 ? ? "C3'" T DC 1 ? ? 1.367 1.419 -0.052 0.006 N 2 1 "O3'" T DA 7 ? ? "C3'" T DA 7 ? ? 1.380 1.419 -0.039 0.006 N 3 1 P D DG 1 ? ? OP3 D DG 1 ? ? 1.492 1.607 -0.115 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 393 ? ? CZ A ARG 393 ? ? NH2 A ARG 393 ? ? 116.45 120.30 -3.85 0.50 N 2 1 "O4'" T DC 4 ? ? "C1'" T DC 4 ? ? N1 T DC 4 ? ? 110.15 108.30 1.85 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 318 ? A -126.41 -154.21 2 1 THR A 318 ? B -126.36 -152.44 3 1 SER A 411 ? ? -163.63 -145.86 4 1 ASN A 493 ? ? -88.26 47.88 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O A A HOH 882 ? 6.16 . 2 1 O ? A HOH 883 ? 7.81 . 3 1 O ? T HOH 140 ? 7.58 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 200 ? CG ? A GLN 72 CG 2 1 Y 1 A GLN 200 ? CD ? A GLN 72 CD 3 1 Y 1 A GLN 200 ? OE1 ? A GLN 72 OE1 4 1 Y 1 A GLN 200 ? NE2 ? A GLN 72 NE2 5 1 Y 1 A GLU 207 ? CD ? A GLU 79 CD 6 1 Y 1 A GLU 207 ? OE1 ? A GLU 79 OE1 7 1 Y 1 A GLU 207 ? OE2 ? A GLU 79 OE2 8 1 Y 1 A ARG 211 ? NE ? A ARG 83 NE 9 1 Y 1 A ARG 211 ? CZ ? A ARG 83 CZ 10 1 Y 1 A ARG 211 ? NH1 ? A ARG 83 NH1 11 1 Y 1 A ARG 211 ? NH2 ? A ARG 83 NH2 12 1 Y 1 A GLU 218 ? CG ? A GLU 90 CG 13 1 Y 1 A GLU 218 ? CD ? A GLU 90 CD 14 1 Y 1 A GLU 218 ? OE1 ? A GLU 90 OE1 15 1 Y 1 A GLU 218 ? OE2 ? A GLU 90 OE2 16 1 Y 1 A GLU 223 ? CD ? A GLU 95 CD 17 1 Y 1 A GLU 223 ? OE1 ? A GLU 95 OE1 18 1 Y 1 A GLU 223 ? OE2 ? A GLU 95 OE2 19 1 Y 1 A GLU 267 ? CG ? A GLU 139 CG 20 1 Y 1 A GLU 267 ? CD ? A GLU 139 CD 21 1 Y 1 A GLU 267 ? OE1 ? A GLU 139 OE1 22 1 Y 1 A GLU 267 ? OE2 ? A GLU 139 OE2 23 1 Y 1 A GLN 268 ? CG ? A GLN 140 CG 24 1 Y 1 A GLN 268 ? CD ? A GLN 140 CD 25 1 Y 1 A GLN 268 ? OE1 ? A GLN 140 OE1 26 1 Y 1 A GLN 268 ? NE2 ? A GLN 140 NE2 27 1 Y 1 A GLN 270 ? CG ? A GLN 142 CG 28 1 Y 1 A GLN 270 ? CD ? A GLN 142 CD 29 1 Y 1 A GLN 270 ? OE1 ? A GLN 142 OE1 30 1 Y 1 A GLN 270 ? NE2 ? A GLN 142 NE2 31 1 Y 1 A LYS 271 ? CG ? A LYS 143 CG 32 1 Y 1 A LYS 271 ? CD ? A LYS 143 CD 33 1 Y 1 A LYS 271 ? CE ? A LYS 143 CE 34 1 Y 1 A LYS 271 ? NZ ? A LYS 143 NZ 35 1 Y 1 A GLN 274 ? CD ? A GLN 146 CD 36 1 Y 1 A GLN 274 ? OE1 ? A GLN 146 OE1 37 1 Y 1 A GLN 274 ? NE2 ? A GLN 146 NE2 38 1 Y 1 A LYS 277 ? CE ? A LYS 149 CE 39 1 Y 1 A LYS 277 ? NZ ? A LYS 149 NZ 40 1 Y 1 A SER 293 ? OG ? A SER 165 OG 41 1 Y 1 A ASP 296 ? CG ? A ASP 168 CG 42 1 Y 1 A ASP 296 ? OD1 ? A ASP 168 OD1 43 1 Y 1 A ASP 296 ? OD2 ? A ASP 168 OD2 44 1 Y 1 A GLN 300 ? CD ? A GLN 172 CD 45 1 Y 1 A GLN 300 ? OE1 ? A GLN 172 OE1 46 1 Y 1 A GLN 300 ? NE2 ? A GLN 172 NE2 47 1 Y 1 A GLU 304 ? CD ? A GLU 176 CD 48 1 Y 1 A GLU 304 ? OE1 ? A GLU 176 OE1 49 1 Y 1 A GLU 304 ? OE2 ? A GLU 176 OE2 50 1 Y 1 A LYS 339 ? CD ? A LYS 211 CD 51 1 Y 1 A LYS 339 ? CE ? A LYS 211 CE 52 1 Y 1 A LYS 339 ? NZ ? A LYS 211 NZ 53 1 Y 1 A GLN 355 ? CD ? A GLN 227 CD 54 1 Y 1 A GLN 355 ? OE1 ? A GLN 227 OE1 55 1 Y 1 A GLN 355 ? NE2 ? A GLN 227 NE2 56 1 Y 1 A ASP 356 ? CG ? A ASP 228 CG 57 1 Y 1 A ASP 356 ? OD1 ? A ASP 228 OD1 58 1 Y 1 A ASP 356 ? OD2 ? A ASP 228 OD2 59 1 Y 1 A GLN 357 ? OE1 ? A GLN 229 OE1 60 1 Y 1 A GLN 357 ? NE2 ? A GLN 229 NE2 61 1 Y 1 A GLN 364 ? CG ? A GLN 236 CG 62 1 Y 1 A GLN 364 ? CD ? A GLN 236 CD 63 1 Y 1 A GLN 364 ? OE1 ? A GLN 236 OE1 64 1 Y 1 A GLN 364 ? NE2 ? A GLN 236 NE2 65 1 Y 1 A GLU 465 ? CG ? A GLU 325 CG 66 1 Y 1 A GLU 465 ? CD ? A GLU 325 CD 67 1 Y 1 A GLU 465 ? OE1 ? A GLU 325 OE1 68 1 Y 1 A GLU 465 ? OE2 ? A GLU 325 OE2 69 1 Y 1 A GLN 466 ? CG ? A GLN 326 CG 70 1 Y 1 A GLN 466 ? CD ? A GLN 326 CD 71 1 Y 1 A GLN 466 ? OE1 ? A GLN 326 OE1 72 1 Y 1 A GLN 466 ? NE2 ? A GLN 326 NE2 73 1 Y 1 A LYS 467 ? CD ? A LYS 327 CD 74 1 Y 1 A LYS 467 ? CE ? A LYS 327 CE 75 1 Y 1 A LYS 467 ? NZ ? A LYS 327 NZ 76 1 Y 1 A GLN 471 ? OE1 ? A GLN 331 OE1 77 1 Y 1 A GLN 471 ? NE2 ? A GLN 331 NE2 78 1 Y 1 A GLU 485 ? CD ? A GLU 345 CD 79 1 Y 1 A GLU 485 ? OE1 ? A GLU 345 OE1 80 1 Y 1 A GLU 485 ? OE2 ? A GLU 345 OE2 81 1 Y 1 P U 5 ? "C4'" ? C U 5 "C4'" 82 1 Y 1 P U 5 ? "O4'" ? C U 5 "O4'" 83 1 Y 1 P U 5 ? "C3'" ? C U 5 "C3'" 84 1 Y 1 P U 5 ? "O3'" ? C U 5 "O3'" 85 1 Y 1 P U 5 ? "C2'" ? C U 5 "C2'" 86 1 Y 1 P U 5 ? "O2'" ? C U 5 "O2'" 87 1 Y 1 P U 5 ? "C1'" ? C U 5 "C1'" 88 1 Y 1 P U 5 ? N1 ? C U 5 N1 89 1 Y 1 P U 5 ? C2 ? C U 5 C2 90 1 Y 1 P U 5 ? O2 ? C U 5 O2 91 1 Y 1 P U 5 ? N3 ? C U 5 N3 92 1 Y 1 P U 5 ? C4 ? C U 5 C4 93 1 Y 1 P U 5 ? O4 ? C U 5 O4 94 1 Y 1 P U 5 ? C5 ? C U 5 C5 95 1 Y 1 P U 5 ? C6 ? C U 5 C6 96 1 N 1 A EPE 508 ? N1 ? L EPE 1 N1 97 1 N 1 A EPE 508 ? C2 ? L EPE 1 C2 98 1 N 1 A EPE 508 ? C3 ? L EPE 1 C3 99 1 N 1 A EPE 508 ? N4 ? L EPE 1 N4 100 1 N 1 A EPE 508 ? C5 ? L EPE 1 C5 101 1 N 1 A EPE 508 ? C6 ? L EPE 1 C6 102 1 N 1 A EPE 508 ? C7 ? L EPE 1 C7 103 1 N 1 A EPE 508 ? C8 ? L EPE 1 C8 104 1 N 1 A EPE 508 ? O8 ? L EPE 1 O8 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 129 ? A GLY 1 2 1 Y 1 A SER 130 ? A SER 2 3 1 Y 1 A ALA 131 ? A ALA 3 4 1 Y 1 A ALA 132 ? A ALA 4 5 1 Y 1 A ALA 133 ? A ALA 5 6 1 Y 1 A SER 134 ? A SER 6 7 1 Y 1 A PRO 135 ? A PRO 7 8 1 Y 1 A ALA 136 ? A ALA 8 9 1 Y 1 A TRP 137 ? A TRP 9 10 1 Y 1 A GLN 366 ? A GLN 238 11 1 Y 1 A HIS 367 ? A HIS 239 12 1 Y 1 A SER 368 ? A SER 240 13 1 Y 1 A CYS 369 ? A CYS 241 14 1 Y 1 A CYS 370 ? A CYS 242 15 1 Y 1 A GLU 371 ? A GLU 243 16 1 Y 1 A SER 372 ? A SER 244 17 1 Y 1 A PRO 373 ? A PRO 245 18 1 Y 1 A THR 374 ? A THR 246 19 1 Y 1 A ARG 375 ? A ARG 247 20 1 Y 1 A LEU 376 ? A LEU 248 21 1 Y 1 A ALA 377 ? A ALA 249 22 1 Y 1 A GLN 378 ? A GLN 250 23 1 Y 1 A GLN 379 ? A GLN 251 24 1 Y 1 A SER 380 ? A SER 252 25 1 Y 1 A HIS 381 ? A HIS 253 26 1 Y 1 A MET 382 ? A MET 254 27 1 Y 1 A ASP 383 ? A ASP 255 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 EPE N1 N N N 241 EPE C2 C N N 242 EPE C3 C N N 243 EPE N4 N N N 244 EPE C5 C N N 245 EPE C6 C N N 246 EPE C7 C N N 247 EPE C8 C N N 248 EPE O8 O N N 249 EPE C9 C N N 250 EPE C10 C N N 251 EPE S S N N 252 EPE O1S O N N 253 EPE O2S O N N 254 EPE O3S O N N 255 EPE H21 H N N 256 EPE H22 H N N 257 EPE H31 H N N 258 EPE H32 H N N 259 EPE H51 H N N 260 EPE H52 H N N 261 EPE H61 H N N 262 EPE H62 H N N 263 EPE H71 H N N 264 EPE H72 H N N 265 EPE H81 H N N 266 EPE H82 H N N 267 EPE HO8 H N N 268 EPE H91 H N N 269 EPE H92 H N N 270 EPE H101 H N N 271 EPE H102 H N N 272 EPE HOS3 H N N 273 GLN N N N N 274 GLN CA C N S 275 GLN C C N N 276 GLN O O N N 277 GLN CB C N N 278 GLN CG C N N 279 GLN CD C N N 280 GLN OE1 O N N 281 GLN NE2 N N N 282 GLN OXT O N N 283 GLN H H N N 284 GLN H2 H N N 285 GLN HA H N N 286 GLN HB2 H N N 287 GLN HB3 H N N 288 GLN HG2 H N N 289 GLN HG3 H N N 290 GLN HE21 H N N 291 GLN HE22 H N N 292 GLN HXT H N N 293 GLU N N N N 294 GLU CA C N S 295 GLU C C N N 296 GLU O O N N 297 GLU CB C N N 298 GLU CG C N N 299 GLU CD C N N 300 GLU OE1 O N N 301 GLU OE2 O N N 302 GLU OXT O N N 303 GLU H H N N 304 GLU H2 H N N 305 GLU HA H N N 306 GLU HB2 H N N 307 GLU HB3 H N N 308 GLU HG2 H N N 309 GLU HG3 H N N 310 GLU HE2 H N N 311 GLU HXT H N N 312 GLY N N N N 313 GLY CA C N N 314 GLY C C N N 315 GLY O O N N 316 GLY OXT O N N 317 GLY H H N N 318 GLY H2 H N N 319 GLY HA2 H N N 320 GLY HA3 H N N 321 GLY HXT H N N 322 HIS N N N N 323 HIS CA C N S 324 HIS C C N N 325 HIS O O N N 326 HIS CB C N N 327 HIS CG C Y N 328 HIS ND1 N Y N 329 HIS CD2 C Y N 330 HIS CE1 C Y N 331 HIS NE2 N Y N 332 HIS OXT O N N 333 HIS H H N N 334 HIS H2 H N N 335 HIS HA H N N 336 HIS HB2 H N N 337 HIS HB3 H N N 338 HIS HD1 H N N 339 HIS HD2 H N N 340 HIS HE1 H N N 341 HIS HE2 H N N 342 HIS HXT H N N 343 HOH O O N N 344 HOH H1 H N N 345 HOH H2 H N N 346 ILE N N N N 347 ILE CA C N S 348 ILE C C N N 349 ILE O O N N 350 ILE CB C N S 351 ILE CG1 C N N 352 ILE CG2 C N N 353 ILE CD1 C N N 354 ILE OXT O N N 355 ILE H H N N 356 ILE H2 H N N 357 ILE HA H N N 358 ILE HB H N N 359 ILE HG12 H N N 360 ILE HG13 H N N 361 ILE HG21 H N N 362 ILE HG22 H N N 363 ILE HG23 H N N 364 ILE HD11 H N N 365 ILE HD12 H N N 366 ILE HD13 H N N 367 ILE HXT H N N 368 LEU N N N N 369 LEU CA C N S 370 LEU C C N N 371 LEU O O N N 372 LEU CB C N N 373 LEU CG C N N 374 LEU CD1 C N N 375 LEU CD2 C N N 376 LEU OXT O N N 377 LEU H H N N 378 LEU H2 H N N 379 LEU HA H N N 380 LEU HB2 H N N 381 LEU HB3 H N N 382 LEU HG H N N 383 LEU HD11 H N N 384 LEU HD12 H N N 385 LEU HD13 H N N 386 LEU HD21 H N N 387 LEU HD22 H N N 388 LEU HD23 H N N 389 LEU HXT H N N 390 LYS N N N N 391 LYS CA C N S 392 LYS C C N N 393 LYS O O N N 394 LYS CB C N N 395 LYS CG C N N 396 LYS CD C N N 397 LYS CE C N N 398 LYS NZ N N N 399 LYS OXT O N N 400 LYS H H N N 401 LYS H2 H N N 402 LYS HA H N N 403 LYS HB2 H N N 404 LYS HB3 H N N 405 LYS HG2 H N N 406 LYS HG3 H N N 407 LYS HD2 H N N 408 LYS HD3 H N N 409 LYS HE2 H N N 410 LYS HE3 H N N 411 LYS HZ1 H N N 412 LYS HZ2 H N N 413 LYS HZ3 H N N 414 LYS HXT H N N 415 MET N N N N 416 MET CA C N S 417 MET C C N N 418 MET O O N N 419 MET CB C N N 420 MET CG C N N 421 MET SD S N N 422 MET CE C N N 423 MET OXT O N N 424 MET H H N N 425 MET H2 H N N 426 MET HA H N N 427 MET HB2 H N N 428 MET HB3 H N N 429 MET HG2 H N N 430 MET HG3 H N N 431 MET HE1 H N N 432 MET HE2 H N N 433 MET HE3 H N N 434 MET HXT H N N 435 MG MG MG N N 436 NA NA NA N N 437 PHE N N N N 438 PHE CA C N S 439 PHE C C N N 440 PHE O O N N 441 PHE CB C N N 442 PHE CG C Y N 443 PHE CD1 C Y N 444 PHE CD2 C Y N 445 PHE CE1 C Y N 446 PHE CE2 C Y N 447 PHE CZ C Y N 448 PHE OXT O N N 449 PHE H H N N 450 PHE H2 H N N 451 PHE HA H N N 452 PHE HB2 H N N 453 PHE HB3 H N N 454 PHE HD1 H N N 455 PHE HD2 H N N 456 PHE HE1 H N N 457 PHE HE2 H N N 458 PHE HZ H N N 459 PHE HXT H N N 460 PRO N N N N 461 PRO CA C N S 462 PRO C C N N 463 PRO O O N N 464 PRO CB C N N 465 PRO CG C N N 466 PRO CD C N N 467 PRO OXT O N N 468 PRO H H N N 469 PRO HA H N N 470 PRO HB2 H N N 471 PRO HB3 H N N 472 PRO HG2 H N N 473 PRO HG3 H N N 474 PRO HD2 H N N 475 PRO HD3 H N N 476 PRO HXT H N N 477 SER N N N N 478 SER CA C N S 479 SER C C N N 480 SER O O N N 481 SER CB C N N 482 SER OG O N N 483 SER OXT O N N 484 SER H H N N 485 SER H2 H N N 486 SER HA H N N 487 SER HB2 H N N 488 SER HB3 H N N 489 SER HG H N N 490 SER HXT H N N 491 THR N N N N 492 THR CA C N S 493 THR C C N N 494 THR O O N N 495 THR CB C N R 496 THR OG1 O N N 497 THR CG2 C N N 498 THR OXT O N N 499 THR H H N N 500 THR H2 H N N 501 THR HA H N N 502 THR HB H N N 503 THR HG1 H N N 504 THR HG21 H N N 505 THR HG22 H N N 506 THR HG23 H N N 507 THR HXT H N N 508 TRP N N N N 509 TRP CA C N S 510 TRP C C N N 511 TRP O O N N 512 TRP CB C N N 513 TRP CG C Y N 514 TRP CD1 C Y N 515 TRP CD2 C Y N 516 TRP NE1 N Y N 517 TRP CE2 C Y N 518 TRP CE3 C Y N 519 TRP CZ2 C Y N 520 TRP CZ3 C Y N 521 TRP CH2 C Y N 522 TRP OXT O N N 523 TRP H H N N 524 TRP H2 H N N 525 TRP HA H N N 526 TRP HB2 H N N 527 TRP HB3 H N N 528 TRP HD1 H N N 529 TRP HE1 H N N 530 TRP HE3 H N N 531 TRP HZ2 H N N 532 TRP HZ3 H N N 533 TRP HH2 H N N 534 TRP HXT H N N 535 TYR N N N N 536 TYR CA C N S 537 TYR C C N N 538 TYR O O N N 539 TYR CB C N N 540 TYR CG C Y N 541 TYR CD1 C Y N 542 TYR CD2 C Y N 543 TYR CE1 C Y N 544 TYR CE2 C Y N 545 TYR CZ C Y N 546 TYR OH O N N 547 TYR OXT O N N 548 TYR H H N N 549 TYR H2 H N N 550 TYR HA H N N 551 TYR HB2 H N N 552 TYR HB3 H N N 553 TYR HD1 H N N 554 TYR HD2 H N N 555 TYR HE1 H N N 556 TYR HE2 H N N 557 TYR HH H N N 558 TYR HXT H N N 559 U OP3 O N N 560 U P P N N 561 U OP1 O N N 562 U OP2 O N N 563 U "O5'" O N N 564 U "C5'" C N N 565 U "C4'" C N R 566 U "O4'" O N N 567 U "C3'" C N S 568 U "O3'" O N N 569 U "C2'" C N R 570 U "O2'" O N N 571 U "C1'" C N R 572 U N1 N N N 573 U C2 C N N 574 U O2 O N N 575 U N3 N N N 576 U C4 C N N 577 U O4 O N N 578 U C5 C N N 579 U C6 C N N 580 U HOP3 H N N 581 U HOP2 H N N 582 U "H5'" H N N 583 U "H5''" H N N 584 U "H4'" H N N 585 U "H3'" H N N 586 U "HO3'" H N N 587 U "H2'" H N N 588 U "HO2'" H N N 589 U "H1'" H N N 590 U H3 H N N 591 U H5 H N N 592 U H6 H N N 593 UTP PA P N R 594 UTP O1A O N N 595 UTP O2A O N N 596 UTP O3A O N N 597 UTP "O5'" O N N 598 UTP PB P N S 599 UTP O1B O N N 600 UTP O2B O N N 601 UTP O3B O N N 602 UTP PG P N N 603 UTP O1G O N N 604 UTP O2G O N N 605 UTP O3G O N N 606 UTP "C5'" C N N 607 UTP "C4'" C N R 608 UTP "O4'" O N N 609 UTP "C1'" C N R 610 UTP "C2'" C N R 611 UTP "O2'" O N N 612 UTP "C3'" C N S 613 UTP "O3'" O N N 614 UTP N1 N Y N 615 UTP C6 C Y N 616 UTP C2 C Y N 617 UTP O2 O N N 618 UTP N3 N Y N 619 UTP C4 C Y N 620 UTP O4 O N N 621 UTP C5 C Y N 622 UTP H2A H N N 623 UTP H1B H N N 624 UTP H1G H N N 625 UTP H3G H N N 626 UTP "H5'1" H N N 627 UTP "H5'2" H N N 628 UTP "H4'" H N N 629 UTP "H1'" H N N 630 UTP "H2'" H N N 631 UTP HA H N N 632 UTP "H3'" H N N 633 UTP HB H N N 634 UTP H6 H N N 635 UTP H3 H N N 636 UTP H5 H N N 637 VAL N N N N 638 VAL CA C N S 639 VAL C C N N 640 VAL O O N N 641 VAL CB C N N 642 VAL CG1 C N N 643 VAL CG2 C N N 644 VAL OXT O N N 645 VAL H H N N 646 VAL H2 H N N 647 VAL HA H N N 648 VAL HB H N N 649 VAL HG11 H N N 650 VAL HG12 H N N 651 VAL HG13 H N N 652 VAL HG21 H N N 653 VAL HG22 H N N 654 VAL HG23 H N N 655 VAL HXT H N N 656 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 EPE N1 C2 sing N N 241 EPE N1 C6 sing N N 242 EPE N1 C9 sing N N 243 EPE C2 C3 sing N N 244 EPE C2 H21 sing N N 245 EPE C2 H22 sing N N 246 EPE C3 N4 sing N N 247 EPE C3 H31 sing N N 248 EPE C3 H32 sing N N 249 EPE N4 C5 sing N N 250 EPE N4 C7 sing N N 251 EPE C5 C6 sing N N 252 EPE C5 H51 sing N N 253 EPE C5 H52 sing N N 254 EPE C6 H61 sing N N 255 EPE C6 H62 sing N N 256 EPE C7 C8 sing N N 257 EPE C7 H71 sing N N 258 EPE C7 H72 sing N N 259 EPE C8 O8 sing N N 260 EPE C8 H81 sing N N 261 EPE C8 H82 sing N N 262 EPE O8 HO8 sing N N 263 EPE C9 C10 sing N N 264 EPE C9 H91 sing N N 265 EPE C9 H92 sing N N 266 EPE C10 S sing N N 267 EPE C10 H101 sing N N 268 EPE C10 H102 sing N N 269 EPE S O1S doub N N 270 EPE S O2S doub N N 271 EPE S O3S sing N N 272 EPE O3S HOS3 sing N N 273 GLN N CA sing N N 274 GLN N H sing N N 275 GLN N H2 sing N N 276 GLN CA C sing N N 277 GLN CA CB sing N N 278 GLN CA HA sing N N 279 GLN C O doub N N 280 GLN C OXT sing N N 281 GLN CB CG sing N N 282 GLN CB HB2 sing N N 283 GLN CB HB3 sing N N 284 GLN CG CD sing N N 285 GLN CG HG2 sing N N 286 GLN CG HG3 sing N N 287 GLN CD OE1 doub N N 288 GLN CD NE2 sing N N 289 GLN NE2 HE21 sing N N 290 GLN NE2 HE22 sing N N 291 GLN OXT HXT sing N N 292 GLU N CA sing N N 293 GLU N H sing N N 294 GLU N H2 sing N N 295 GLU CA C sing N N 296 GLU CA CB sing N N 297 GLU CA HA sing N N 298 GLU C O doub N N 299 GLU C OXT sing N N 300 GLU CB CG sing N N 301 GLU CB HB2 sing N N 302 GLU CB HB3 sing N N 303 GLU CG CD sing N N 304 GLU CG HG2 sing N N 305 GLU CG HG3 sing N N 306 GLU CD OE1 doub N N 307 GLU CD OE2 sing N N 308 GLU OE2 HE2 sing N N 309 GLU OXT HXT sing N N 310 GLY N CA sing N N 311 GLY N H sing N N 312 GLY N H2 sing N N 313 GLY CA C sing N N 314 GLY CA HA2 sing N N 315 GLY CA HA3 sing N N 316 GLY C O doub N N 317 GLY C OXT sing N N 318 GLY OXT HXT sing N N 319 HIS N CA sing N N 320 HIS N H sing N N 321 HIS N H2 sing N N 322 HIS CA C sing N N 323 HIS CA CB sing N N 324 HIS CA HA sing N N 325 HIS C O doub N N 326 HIS C OXT sing N N 327 HIS CB CG sing N N 328 HIS CB HB2 sing N N 329 HIS CB HB3 sing N N 330 HIS CG ND1 sing Y N 331 HIS CG CD2 doub Y N 332 HIS ND1 CE1 doub Y N 333 HIS ND1 HD1 sing N N 334 HIS CD2 NE2 sing Y N 335 HIS CD2 HD2 sing N N 336 HIS CE1 NE2 sing Y N 337 HIS CE1 HE1 sing N N 338 HIS NE2 HE2 sing N N 339 HIS OXT HXT sing N N 340 HOH O H1 sing N N 341 HOH O H2 sing N N 342 ILE N CA sing N N 343 ILE N H sing N N 344 ILE N H2 sing N N 345 ILE CA C sing N N 346 ILE CA CB sing N N 347 ILE CA HA sing N N 348 ILE C O doub N N 349 ILE C OXT sing N N 350 ILE CB CG1 sing N N 351 ILE CB CG2 sing N N 352 ILE CB HB sing N N 353 ILE CG1 CD1 sing N N 354 ILE CG1 HG12 sing N N 355 ILE CG1 HG13 sing N N 356 ILE CG2 HG21 sing N N 357 ILE CG2 HG22 sing N N 358 ILE CG2 HG23 sing N N 359 ILE CD1 HD11 sing N N 360 ILE CD1 HD12 sing N N 361 ILE CD1 HD13 sing N N 362 ILE OXT HXT sing N N 363 LEU N CA sing N N 364 LEU N H sing N N 365 LEU N H2 sing N N 366 LEU CA C sing N N 367 LEU CA CB sing N N 368 LEU CA HA sing N N 369 LEU C O doub N N 370 LEU C OXT sing N N 371 LEU CB CG sing N N 372 LEU CB HB2 sing N N 373 LEU CB HB3 sing N N 374 LEU CG CD1 sing N N 375 LEU CG CD2 sing N N 376 LEU CG HG sing N N 377 LEU CD1 HD11 sing N N 378 LEU CD1 HD12 sing N N 379 LEU CD1 HD13 sing N N 380 LEU CD2 HD21 sing N N 381 LEU CD2 HD22 sing N N 382 LEU CD2 HD23 sing N N 383 LEU OXT HXT sing N N 384 LYS N CA sing N N 385 LYS N H sing N N 386 LYS N H2 sing N N 387 LYS CA C sing N N 388 LYS CA CB sing N N 389 LYS CA HA sing N N 390 LYS C O doub N N 391 LYS C OXT sing N N 392 LYS CB CG sing N N 393 LYS CB HB2 sing N N 394 LYS CB HB3 sing N N 395 LYS CG CD sing N N 396 LYS CG HG2 sing N N 397 LYS CG HG3 sing N N 398 LYS CD CE sing N N 399 LYS CD HD2 sing N N 400 LYS CD HD3 sing N N 401 LYS CE NZ sing N N 402 LYS CE HE2 sing N N 403 LYS CE HE3 sing N N 404 LYS NZ HZ1 sing N N 405 LYS NZ HZ2 sing N N 406 LYS NZ HZ3 sing N N 407 LYS OXT HXT sing N N 408 MET N CA sing N N 409 MET N H sing N N 410 MET N H2 sing N N 411 MET CA C sing N N 412 MET CA CB sing N N 413 MET CA HA sing N N 414 MET C O doub N N 415 MET C OXT sing N N 416 MET CB CG sing N N 417 MET CB HB2 sing N N 418 MET CB HB3 sing N N 419 MET CG SD sing N N 420 MET CG HG2 sing N N 421 MET CG HG3 sing N N 422 MET SD CE sing N N 423 MET CE HE1 sing N N 424 MET CE HE2 sing N N 425 MET CE HE3 sing N N 426 MET OXT HXT sing N N 427 PHE N CA sing N N 428 PHE N H sing N N 429 PHE N H2 sing N N 430 PHE CA C sing N N 431 PHE CA CB sing N N 432 PHE CA HA sing N N 433 PHE C O doub N N 434 PHE C OXT sing N N 435 PHE CB CG sing N N 436 PHE CB HB2 sing N N 437 PHE CB HB3 sing N N 438 PHE CG CD1 doub Y N 439 PHE CG CD2 sing Y N 440 PHE CD1 CE1 sing Y N 441 PHE CD1 HD1 sing N N 442 PHE CD2 CE2 doub Y N 443 PHE CD2 HD2 sing N N 444 PHE CE1 CZ doub Y N 445 PHE CE1 HE1 sing N N 446 PHE CE2 CZ sing Y N 447 PHE CE2 HE2 sing N N 448 PHE CZ HZ sing N N 449 PHE OXT HXT sing N N 450 PRO N CA sing N N 451 PRO N CD sing N N 452 PRO N H sing N N 453 PRO CA C sing N N 454 PRO CA CB sing N N 455 PRO CA HA sing N N 456 PRO C O doub N N 457 PRO C OXT sing N N 458 PRO CB CG sing N N 459 PRO CB HB2 sing N N 460 PRO CB HB3 sing N N 461 PRO CG CD sing N N 462 PRO CG HG2 sing N N 463 PRO CG HG3 sing N N 464 PRO CD HD2 sing N N 465 PRO CD HD3 sing N N 466 PRO OXT HXT sing N N 467 SER N CA sing N N 468 SER N H sing N N 469 SER N H2 sing N N 470 SER CA C sing N N 471 SER CA CB sing N N 472 SER CA HA sing N N 473 SER C O doub N N 474 SER C OXT sing N N 475 SER CB OG sing N N 476 SER CB HB2 sing N N 477 SER CB HB3 sing N N 478 SER OG HG sing N N 479 SER OXT HXT sing N N 480 THR N CA sing N N 481 THR N H sing N N 482 THR N H2 sing N N 483 THR CA C sing N N 484 THR CA CB sing N N 485 THR CA HA sing N N 486 THR C O doub N N 487 THR C OXT sing N N 488 THR CB OG1 sing N N 489 THR CB CG2 sing N N 490 THR CB HB sing N N 491 THR OG1 HG1 sing N N 492 THR CG2 HG21 sing N N 493 THR CG2 HG22 sing N N 494 THR CG2 HG23 sing N N 495 THR OXT HXT sing N N 496 TRP N CA sing N N 497 TRP N H sing N N 498 TRP N H2 sing N N 499 TRP CA C sing N N 500 TRP CA CB sing N N 501 TRP CA HA sing N N 502 TRP C O doub N N 503 TRP C OXT sing N N 504 TRP CB CG sing N N 505 TRP CB HB2 sing N N 506 TRP CB HB3 sing N N 507 TRP CG CD1 doub Y N 508 TRP CG CD2 sing Y N 509 TRP CD1 NE1 sing Y N 510 TRP CD1 HD1 sing N N 511 TRP CD2 CE2 doub Y N 512 TRP CD2 CE3 sing Y N 513 TRP NE1 CE2 sing Y N 514 TRP NE1 HE1 sing N N 515 TRP CE2 CZ2 sing Y N 516 TRP CE3 CZ3 doub Y N 517 TRP CE3 HE3 sing N N 518 TRP CZ2 CH2 doub Y N 519 TRP CZ2 HZ2 sing N N 520 TRP CZ3 CH2 sing Y N 521 TRP CZ3 HZ3 sing N N 522 TRP CH2 HH2 sing N N 523 TRP OXT HXT sing N N 524 TYR N CA sing N N 525 TYR N H sing N N 526 TYR N H2 sing N N 527 TYR CA C sing N N 528 TYR CA CB sing N N 529 TYR CA HA sing N N 530 TYR C O doub N N 531 TYR C OXT sing N N 532 TYR CB CG sing N N 533 TYR CB HB2 sing N N 534 TYR CB HB3 sing N N 535 TYR CG CD1 doub Y N 536 TYR CG CD2 sing Y N 537 TYR CD1 CE1 sing Y N 538 TYR CD1 HD1 sing N N 539 TYR CD2 CE2 doub Y N 540 TYR CD2 HD2 sing N N 541 TYR CE1 CZ doub Y N 542 TYR CE1 HE1 sing N N 543 TYR CE2 CZ sing Y N 544 TYR CE2 HE2 sing N N 545 TYR CZ OH sing N N 546 TYR OH HH sing N N 547 TYR OXT HXT sing N N 548 U OP3 P sing N N 549 U OP3 HOP3 sing N N 550 U P OP1 doub N N 551 U P OP2 sing N N 552 U P "O5'" sing N N 553 U OP2 HOP2 sing N N 554 U "O5'" "C5'" sing N N 555 U "C5'" "C4'" sing N N 556 U "C5'" "H5'" sing N N 557 U "C5'" "H5''" sing N N 558 U "C4'" "O4'" sing N N 559 U "C4'" "C3'" sing N N 560 U "C4'" "H4'" sing N N 561 U "O4'" "C1'" sing N N 562 U "C3'" "O3'" sing N N 563 U "C3'" "C2'" sing N N 564 U "C3'" "H3'" sing N N 565 U "O3'" "HO3'" sing N N 566 U "C2'" "O2'" sing N N 567 U "C2'" "C1'" sing N N 568 U "C2'" "H2'" sing N N 569 U "O2'" "HO2'" sing N N 570 U "C1'" N1 sing N N 571 U "C1'" "H1'" sing N N 572 U N1 C2 sing N N 573 U N1 C6 sing N N 574 U C2 O2 doub N N 575 U C2 N3 sing N N 576 U N3 C4 sing N N 577 U N3 H3 sing N N 578 U C4 O4 doub N N 579 U C4 C5 sing N N 580 U C5 C6 doub N N 581 U C5 H5 sing N N 582 U C6 H6 sing N N 583 UTP PA O1A doub N N 584 UTP PA O2A sing N N 585 UTP PA O3A sing N N 586 UTP PA "O5'" sing N N 587 UTP O2A H2A sing N N 588 UTP O3A PB sing N N 589 UTP "O5'" "C5'" sing N N 590 UTP PB O1B sing N N 591 UTP PB O2B doub N N 592 UTP PB O3B sing N N 593 UTP O1B H1B sing N N 594 UTP O3B PG sing N N 595 UTP PG O1G sing N N 596 UTP PG O2G doub N N 597 UTP PG O3G sing N N 598 UTP O1G H1G sing N N 599 UTP O3G H3G sing N N 600 UTP "C5'" "C4'" sing N N 601 UTP "C5'" "H5'1" sing N N 602 UTP "C5'" "H5'2" sing N N 603 UTP "C4'" "O4'" sing N N 604 UTP "C4'" "C3'" sing N N 605 UTP "C4'" "H4'" sing N N 606 UTP "O4'" "C1'" sing N N 607 UTP "C1'" "C2'" sing N N 608 UTP "C1'" N1 sing N N 609 UTP "C1'" "H1'" sing N N 610 UTP "C2'" "O2'" sing N N 611 UTP "C2'" "C3'" sing N N 612 UTP "C2'" "H2'" sing N N 613 UTP "O2'" HA sing N N 614 UTP "C3'" "O3'" sing N N 615 UTP "C3'" "H3'" sing N N 616 UTP "O3'" HB sing N N 617 UTP N1 C6 sing Y N 618 UTP N1 C2 sing Y N 619 UTP C6 C5 doub Y N 620 UTP C6 H6 sing N N 621 UTP C2 O2 doub N N 622 UTP C2 N3 sing Y N 623 UTP N3 C4 sing Y N 624 UTP N3 H3 sing N N 625 UTP C4 O4 doub N N 626 UTP C4 C5 sing Y N 627 UTP C5 H5 sing N N 628 VAL N CA sing N N 629 VAL N H sing N N 630 VAL N H2 sing N N 631 VAL CA C sing N N 632 VAL CA CB sing N N 633 VAL CA HA sing N N 634 VAL C O doub N N 635 VAL C OXT sing N N 636 VAL CB CG1 sing N N 637 VAL CB CG2 sing N N 638 VAL CB HB sing N N 639 VAL CG1 HG11 sing N N 640 VAL CG1 HG12 sing N N 641 VAL CG1 HG13 sing N N 642 VAL CG2 HG21 sing N N 643 VAL CG2 HG22 sing N N 644 VAL CG2 HG23 sing N N 645 VAL OXT HXT sing N N 646 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5VZ8 'double helix' 5VZ8 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 D DG 4 1_555 0.165 -0.125 0.297 -10.147 -13.275 -3.759 1 T_DC1:DG4_D T 1 ? D 4 ? 19 1 1 B DG 2 1_555 D DC 3 1_555 -0.190 -0.073 0.162 -0.253 -9.840 1.722 2 T_DG2:DC3_D T 2 ? D 3 ? 19 1 1 B DG 3 1_555 D DC 2 1_555 -0.259 -0.184 0.149 0.295 -9.143 -1.910 3 T_DG3:DC2_D T 3 ? D 2 ? 19 1 1 B DC 4 1_555 D DG 1 1_555 0.249 -0.082 -0.289 13.790 3.568 -1.317 4 T_DC4:DG1_D T 4 ? D 1 ? 19 1 1 B DT 6 1_555 C DA 4 1_555 0.017 -0.984 0.030 -15.279 10.964 -171.228 5 T_DT6:DA4_P T 6 ? P 4 ? 21 2 1 B DA 7 1_555 C DT 3 1_555 0.275 -0.132 0.061 13.127 -1.595 1.362 6 T_DA7:DT3_P T 7 ? P 3 ? 20 1 1 B DC 8 1_555 C DG 2 1_555 0.256 -0.134 0.087 13.880 -15.153 -0.507 7 T_DC8:DG2_P T 8 ? P 2 ? 19 1 1 B DG 9 1_555 C DC 1 1_555 -0.112 -0.144 0.104 0.190 -11.119 0.049 8 T_DG9:DC1_P T 9 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 D DG 4 1_555 B DG 2 1_555 D DC 3 1_555 -0.246 0.573 3.224 2.375 7.623 30.937 -0.348 0.881 3.242 14.000 -4.361 31.926 1 TT_DC1DG2:DC3DG4_DD T 1 ? D 4 ? T 2 ? D 3 ? 1 B DG 2 1_555 D DC 3 1_555 B DG 3 1_555 D DC 2 1_555 0.565 -0.092 3.390 -1.473 4.780 34.855 -0.885 -1.161 3.323 7.929 2.444 35.201 2 TT_DG2DG3:DC2DC3_DD T 2 ? D 3 ? T 3 ? D 2 ? 1 B DG 3 1_555 D DC 2 1_555 B DC 4 1_555 D DG 1 1_555 0.390 0.094 3.082 4.699 3.270 26.632 -0.583 0.294 3.092 6.996 -10.053 27.229 3 TT_DG3DC4:DG1DC2_DD T 3 ? D 2 ? T 4 ? D 1 ? 1 B DT 6 1_555 C DA 4 1_555 B DA 7 1_555 C DT 3 1_555 -0.926 0.919 2.864 3.045 3.285 -73.204 -0.862 -0.690 2.857 -2.752 2.551 -73.322 4 TT_DT6DA7:DT3DA4_PP T 6 ? P 4 ? T 7 ? P 3 ? 1 B DA 7 1_555 C DT 3 1_555 B DC 8 1_555 C DG 2 1_555 -0.518 -0.749 3.427 -4.311 -1.391 33.591 -1.047 0.153 3.491 -2.393 7.418 33.886 5 TT_DA7DC8:DG2DT3_PP T 7 ? P 3 ? T 8 ? P 2 ? 1 B DC 8 1_555 C DG 2 1_555 B DG 9 1_555 C DC 1 1_555 -0.683 -1.148 3.477 -4.541 8.469 37.391 -2.825 0.450 3.209 12.951 6.944 38.563 6 TT_DC8DG9:DC1DG2_PP T 8 ? P 2 ? T 9 ? P 1 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' '1ZIA ES 102645' 1 'National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)' 'United States' 'Z01 ES065070' 2 'American Cancer Society' 'United States' PF-14-0438-01-DMC 3 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' CA097096 4 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 ;URIDINE 5'-TRIPHOSPHATE ; UTP 8 1,2-ETHANEDIOL EDO 9 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 10 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4M04 _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #