HEADER IMMUNE SYSTEM 30-MAY-17 5W06 TITLE HUMAN TISSUE FACTOR IN COMPLEX WITH ANTIBODY M1587 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TISSUE FACTOR; COMPND 3 CHAIN: T; COMPND 4 FRAGMENT: EXTRACELLULAR DOMAIN (UNP RESIDUES 37-245); COMPND 5 SYNONYM: TF,COAGULATION FACTOR III,THROMBOPLASTIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: M1587 FAB LIGHT CHAIN; COMPND 9 CHAIN: L; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: M1587 FAB HEAVY CHAIN; COMPND 13 CHAIN: H; COMPND 14 FRAGMENT: FD; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: F3; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 11 ORGANISM_COMMON: MOUSE; SOURCE 12 ORGANISM_TAXID: 10090; SOURCE 13 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 14 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 16 MOL_ID: 3; SOURCE 17 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 18 ORGANISM_COMMON: MOUSE; SOURCE 19 ORGANISM_TAXID: 10090; SOURCE 20 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 21 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.TEPLYAKOV,G.OBMOLOVA,T.J.MALIA,G.L.GILLILAND REVDAT 4 04-OCT-23 5W06 1 REMARK REVDAT 3 07-MAR-18 5W06 1 JRNL REVDAT 2 31-JAN-18 5W06 1 JRNL REVDAT 1 14-JUN-17 5W06 0 JRNL AUTH A.TEPLYAKOV,G.OBMOLOVA,T.J.MALIA,G.RAGHUNATHAN,C.MARTINEZ, JRNL AUTH 2 J.FRANSSON,W.EDWARDS,J.CONNOR,M.HUSOVSKY,H.BECK,E.CHI, JRNL AUTH 3 S.FENTON,H.ZHOU,J.C.ALMAGRO,G.L.GILLILAND JRNL TITL STRUCTURAL INSIGHTS INTO HUMANIZATION OF ANTI-TISSUE FACTOR JRNL TITL 2 ANTIBODY 10H10. JRNL REF MABS V. 10 269 2018 JRNL REFN ESSN 1942-0870 JRNL PMID 29283291 JRNL DOI 10.1080/19420862.2017.1412026 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 22930 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 954 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1575 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2690 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4900 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 107 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.23000 REMARK 3 B22 (A**2) : -0.53000 REMARK 3 B33 (A**2) : 1.76000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.652 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.291 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.211 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.034 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5034 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6851 ; 1.142 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 632 ; 8.109 ; 5.040 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;39.354 ;24.752 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 813 ;14.573 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;14.694 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 770 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3757 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2529 ; 3.446 ; 5.532 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3153 ; 5.556 ;12.406 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2504 ; 4.955 ; 5.792 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6934 ; 9.892 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228227. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23936 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.67 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.40300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1UJ3, 4M7K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE PH 4.5, 18% PEG REMARK 280 3K, 0.2 M AMMONIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 34.05000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 87.78000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.05000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 87.78000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: T, L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY T 81 REMARK 465 ASN T 82 REMARK 465 VAL T 83 REMARK 465 GLU T 84 REMARK 465 SER T 85 REMARK 465 THR T 86 REMARK 465 GLY T 87 REMARK 465 SER T 88 REMARK 465 ALA T 89 REMARK 465 GLY T 90 REMARK 465 GLU T 213 REMARK 465 HIS T 214 REMARK 465 HIS T 215 REMARK 465 HIS T 216 REMARK 465 HIS T 217 REMARK 465 HIS T 218 REMARK 465 HIS T 219 REMARK 465 CYS L 220 REMARK 465 LYS H 136 REMARK 465 SER H 137 REMARK 465 THR H 138 REMARK 465 SER H 139 REMARK 465 GLY H 140 REMARK 465 SER H 222 REMARK 465 CYS H 223 REMARK 465 HIS H 224 REMARK 465 HIS H 225 REMARK 465 HIS H 226 REMARK 465 HIS H 227 REMARK 465 HIS H 228 REMARK 465 HIS H 229 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN T 5 CG OD1 ND2 REMARK 470 GLU T 91 CB CG CD OE1 OE2 REMARK 470 SER T 160 OG REMARK 470 SER T 161 OG REMARK 470 SER T 162 OG REMARK 470 SER T 163 OG REMARK 470 GLN T 212 CG CD OE1 NE2 REMARK 470 LYS H 221 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE T 19 -6.61 73.68 REMARK 500 LYS T 48 -52.50 -123.16 REMARK 500 ASN T 137 -108.43 55.71 REMARK 500 SER T 163 48.09 -103.70 REMARK 500 THR T 172 -150.13 -98.71 REMARK 500 ALA L 57 -29.74 65.90 REMARK 500 ASN L 144 71.15 52.83 REMARK 500 SER H 134 -138.03 -124.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL L 901 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M7K RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ANTI-TISSUE FACTOR ANTIBODY 10H10 REMARK 900 RELATED ID: 4M7L RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN HUMAN TISSUE FACTOR REMARK 900 EXTRACELLULAR DOMAIN AND ANTIBODY 10H10 FAB FRAGMENT REMARK 900 RELATED ID: 5W06 RELATED DB: PDB DBREF 5W06 T 5 213 UNP P13726 TF_HUMAN 37 245 DBREF 5W06 L 1 220 PDB 5W06 5W06 1 220 DBREF 5W06 H 1 229 PDB 5W06 5W06 1 229 SEQADV 5W06 HIS T 214 UNP P13726 EXPRESSION TAG SEQADV 5W06 HIS T 215 UNP P13726 EXPRESSION TAG SEQADV 5W06 HIS T 216 UNP P13726 EXPRESSION TAG SEQADV 5W06 HIS T 217 UNP P13726 EXPRESSION TAG SEQADV 5W06 HIS T 218 UNP P13726 EXPRESSION TAG SEQADV 5W06 HIS T 219 UNP P13726 EXPRESSION TAG SEQRES 1 T 215 ASN THR VAL ALA ALA TYR ASN LEU THR TRP LYS SER THR SEQRES 2 T 215 ASN PHE LYS THR ILE LEU GLU TRP GLU PRO LYS PRO VAL SEQRES 3 T 215 ASN GLN VAL TYR THR VAL GLN ILE SER THR LYS SER GLY SEQRES 4 T 215 ASP TRP LYS SER LYS CYS PHE TYR THR THR ASP THR GLU SEQRES 5 T 215 CYS ASP LEU THR ASP GLU ILE VAL LYS ASP VAL LYS GLN SEQRES 6 T 215 THR TYR LEU ALA ARG VAL PHE SER TYR PRO ALA GLY ASN SEQRES 7 T 215 VAL GLU SER THR GLY SER ALA GLY GLU PRO LEU TYR GLU SEQRES 8 T 215 ASN SER PRO GLU PHE THR PRO TYR LEU GLU THR ASN LEU SEQRES 9 T 215 GLY GLN PRO THR ILE GLN SER PHE GLU GLN VAL GLY THR SEQRES 10 T 215 LYS VAL ASN VAL THR VAL GLU ASP GLU ARG THR LEU VAL SEQRES 11 T 215 ARG ARG ASN ASN THR PHE LEU SER LEU ARG ASP VAL PHE SEQRES 12 T 215 GLY LYS ASP LEU ILE TYR THR LEU TYR TYR TRP LYS SER SEQRES 13 T 215 SER SER SER GLY LYS LYS THR ALA LYS THR ASN THR ASN SEQRES 14 T 215 GLU PHE LEU ILE ASP VAL ASP LYS GLY GLU ASN TYR CYS SEQRES 15 T 215 PHE SER VAL GLN ALA VAL ILE PRO SER ARG THR VAL ASN SEQRES 16 T 215 ARG LYS SER THR ASP SER PRO VAL GLU CYS MET GLY GLN SEQRES 17 T 215 GLU HIS HIS HIS HIS HIS HIS SEQRES 1 L 220 ASP ILE VAL MET THR GLN THR PRO LEU SER LEU PRO VAL SEQRES 2 L 220 THR PRO GLY GLU PRO ALA SER ILE SER CYS LYS SER SER SEQRES 3 L 220 GLN SER LEU LEU SER SER GLY ASN GLN LYS ASN TYR LEU SEQRES 4 L 220 THR TRP TYR LEU GLN LYS PRO GLY GLN SER PRO GLN LEU SEQRES 5 L 220 LEU ILE TYR TRP ALA SER THR ARG GLU SER GLY VAL PRO SEQRES 6 L 220 ASP ARG PHE SER GLY SER GLY SER GLY THR ASP PHE THR SEQRES 7 L 220 LEU LYS ILE SER ARG VAL GLU ALA GLU ASP VAL GLY VAL SEQRES 8 L 220 TYR TYR CYS GLN ASN ASP TYR THR TYR PRO LEU THR PHE SEQRES 9 L 220 GLY GLN GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA SEQRES 10 L 220 ALA PRO SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN SEQRES 11 L 220 LEU LYS SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN SEQRES 12 L 220 ASN PHE TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL SEQRES 13 L 220 ASP ASN ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL SEQRES 14 L 220 THR GLU GLN ASP SER LYS ASP SER THR TYR SER LEU SER SEQRES 15 L 220 SER THR LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS SEQRES 16 L 220 LYS VAL TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SEQRES 17 L 220 SER PRO VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 H 229 GLU VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 H 229 PRO GLY GLU SER LEU ARG ILE SER CYS LYS GLY SER GLY SEQRES 3 H 229 TYR THR PHE ILE PRO TYR TRP ILE GLU TRP VAL ARG GLN SEQRES 4 H 229 MET PRO GLY LYS GLY LEU GLU TRP MET GLY ASP ILE LEU SEQRES 5 H 229 PRO GLY SER GLY PHE THR THR TYR SER PRO SER PHE GLN SEQRES 6 H 229 GLY HIS VAL THR ILE SER ALA ASP LYS SER ILE SER THR SEQRES 7 H 229 ALA TYR LEU GLN TRP SER SER LEU LYS ALA SER ASP THR SEQRES 8 H 229 ALA MET TYR TYR CYS ALA ARG SER GLY TYR TYR GLY ASN SEQRES 9 H 229 SER GLY PHE ALA TYR TRP GLY GLN GLY THR LEU VAL THR SEQRES 10 H 229 VAL SER SER ALA SER THR LYS GLY PRO SER VAL PHE PRO SEQRES 11 H 229 LEU ALA PRO SER SER LYS SER THR SER GLY GLY THR ALA SEQRES 12 H 229 ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO SEQRES 13 H 229 VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SER GLY SEQRES 14 H 229 VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER GLY LEU SEQRES 15 H 229 TYR SER LEU SER SER VAL VAL THR VAL PRO SER SER SER SEQRES 16 H 229 LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN HIS LYS SEQRES 17 H 229 PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SEQRES 18 H 229 SER CYS HIS HIS HIS HIS HIS HIS HET GOL L 901 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *107(H2 O) HELIX 1 AA1 LEU T 59 VAL T 64 1 6 HELIX 2 AA2 THR T 101 THR T 106 1 6 HELIX 3 AA3 LEU T 143 GLY T 148 1 6 HELIX 4 AA4 LYS T 149 LEU T 151 5 3 HELIX 5 AA5 GLU L 85 VAL L 89 5 5 HELIX 6 AA6 SER L 127 SER L 133 1 7 HELIX 7 AA7 LYS L 189 LYS L 194 1 6 HELIX 8 AA8 LYS H 87 THR H 91 5 5 HELIX 9 AA9 SER H 194 GLY H 197 5 4 HELIX 10 AB1 LYS H 208 ASN H 211 5 4 SHEET 1 AA1 3 TYR T 10 THR T 17 0 SHEET 2 AA1 3 LYS T 20 GLU T 26 -1 O ILE T 22 N LYS T 15 SHEET 3 AA1 3 GLU T 56 ASP T 58 -1 O CYS T 57 N LEU T 23 SHEET 1 AA2 4 LYS T 46 THR T 52 0 SHEET 2 AA2 4 GLN T 32 THR T 40 -1 N ILE T 38 O LYS T 46 SHEET 3 AA2 4 TYR T 71 PRO T 79 -1 O TYR T 78 N VAL T 33 SHEET 4 AA2 4 LEU T 93 ASN T 96 -1 O LEU T 93 N SER T 77 SHEET 1 AA3 3 ILE T 113 VAL T 119 0 SHEET 2 AA3 3 LYS T 122 VAL T 127 -1 O ASN T 124 N GLU T 117 SHEET 3 AA3 3 GLU T 174 ASP T 178 -1 O PHE T 175 N VAL T 125 SHEET 1 AA4 2 ARG T 131 ARG T 136 0 SHEET 2 AA4 2 THR T 139 SER T 142 -1 O LEU T 141 N THR T 132 SHEET 1 AA5 4 LYS T 166 THR T 170 0 SHEET 2 AA5 4 ILE T 152 TRP T 158 -1 N LEU T 155 O ALA T 168 SHEET 3 AA5 4 CYS T 186 VAL T 192 -1 O VAL T 192 N ILE T 152 SHEET 4 AA5 4 GLU T 208 CYS T 209 -1 O GLU T 208 N PHE T 187 SHEET 1 AA6 4 MET L 4 THR L 7 0 SHEET 2 AA6 4 ALA L 19 SER L 25 -1 O LYS L 24 N THR L 5 SHEET 3 AA6 4 ASP L 76 ILE L 81 -1 O LEU L 79 N ILE L 21 SHEET 4 AA6 4 PHE L 68 SER L 73 -1 N SER L 69 O LYS L 80 SHEET 1 AA7 6 SER L 10 VAL L 13 0 SHEET 2 AA7 6 THR L 108 ILE L 112 1 O LYS L 109 N LEU L 11 SHEET 3 AA7 6 GLY L 90 ASN L 96 -1 N GLY L 90 O LEU L 110 SHEET 4 AA7 6 LEU L 39 GLN L 44 -1 N GLN L 44 O VAL L 91 SHEET 5 AA7 6 GLN L 51 TYR L 55 -1 O ILE L 54 N TRP L 41 SHEET 6 AA7 6 THR L 59 ARG L 60 -1 O THR L 59 N TYR L 55 SHEET 1 AA8 4 SER L 10 VAL L 13 0 SHEET 2 AA8 4 THR L 108 ILE L 112 1 O LYS L 109 N LEU L 11 SHEET 3 AA8 4 GLY L 90 ASN L 96 -1 N GLY L 90 O LEU L 110 SHEET 4 AA8 4 THR L 103 PHE L 104 -1 O THR L 103 N ASN L 96 SHEET 1 AA9 2 LEU L 30 SER L 31 0 SHEET 2 AA9 2 LYS L 36 ASN L 37 -1 O LYS L 36 N SER L 31 SHEET 1 AB1 4 SER L 120 PHE L 124 0 SHEET 2 AB1 4 THR L 135 PHE L 145 -1 O VAL L 139 N PHE L 124 SHEET 3 AB1 4 TYR L 179 SER L 188 -1 O LEU L 181 N LEU L 142 SHEET 4 AB1 4 SER L 165 VAL L 169 -1 N SER L 168 O SER L 182 SHEET 1 AB2 4 ALA L 159 LEU L 160 0 SHEET 2 AB2 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 AB2 4 VAL L 197 THR L 203 -1 O GLU L 201 N GLN L 153 SHEET 4 AB2 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SHEET 1 AB3 4 GLN H 3 GLN H 6 0 SHEET 2 AB3 4 LEU H 18 SER H 25 -1 O LYS H 23 N VAL H 5 SHEET 3 AB3 4 THR H 78 TRP H 83 -1 O LEU H 81 N ILE H 20 SHEET 4 AB3 4 VAL H 68 ASP H 73 -1 N SER H 71 O TYR H 80 SHEET 1 AB4 6 GLU H 10 LYS H 12 0 SHEET 2 AB4 6 THR H 114 VAL H 118 1 O THR H 117 N GLU H 10 SHEET 3 AB4 6 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 AB4 6 ILE H 34 GLN H 39 -1 N GLU H 35 O ALA H 97 SHEET 5 AB4 6 LEU H 45 ILE H 51 -1 O MET H 48 N TRP H 36 SHEET 6 AB4 6 THR H 58 TYR H 60 -1 O THR H 59 N ASP H 50 SHEET 1 AB5 4 GLU H 10 LYS H 12 0 SHEET 2 AB5 4 THR H 114 VAL H 118 1 O THR H 117 N GLU H 10 SHEET 3 AB5 4 ALA H 92 SER H 99 -1 N ALA H 92 O VAL H 116 SHEET 4 AB5 4 PHE H 107 TRP H 110 -1 O TYR H 109 N ARG H 98 SHEET 1 AB6 4 SER H 127 LEU H 131 0 SHEET 2 AB6 4 THR H 142 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 AB6 4 TYR H 183 PRO H 192 -1 O LEU H 185 N VAL H 149 SHEET 4 AB6 4 VAL H 170 THR H 172 -1 N HIS H 171 O VAL H 188 SHEET 1 AB7 4 SER H 127 LEU H 131 0 SHEET 2 AB7 4 THR H 142 TYR H 152 -1 O LEU H 148 N PHE H 129 SHEET 3 AB7 4 TYR H 183 PRO H 192 -1 O LEU H 185 N VAL H 149 SHEET 4 AB7 4 VAL H 176 LEU H 177 -1 N VAL H 176 O SER H 184 SHEET 1 AB8 3 THR H 158 TRP H 161 0 SHEET 2 AB8 3 ILE H 202 HIS H 207 -1 O ASN H 204 N SER H 160 SHEET 3 AB8 3 THR H 212 LYS H 217 -1 O VAL H 214 N VAL H 205 SSBOND 1 CYS T 49 CYS T 57 1555 1555 2.04 SSBOND 2 CYS T 186 CYS T 209 1555 1555 2.04 SSBOND 3 CYS L 23 CYS L 94 1555 1555 2.05 SSBOND 4 CYS L 140 CYS L 200 1555 1555 2.05 SSBOND 5 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 6 CYS H 147 CYS H 203 1555 1555 2.03 CISPEP 1 GLU T 26 PRO T 27 0 0.80 CISPEP 2 THR L 7 PRO L 8 0 -3.68 CISPEP 3 TYR L 100 PRO L 101 0 -2.28 CISPEP 4 TYR L 146 PRO L 147 0 5.16 CISPEP 5 PHE H 153 PRO H 154 0 -2.59 CISPEP 6 GLU H 155 PRO H 156 0 3.17 SITE 1 AC1 11 PHE H 173 PRO H 174 VAL H 176 SER H 184 SITE 2 AC1 11 LEU H 185 SER H 186 GLN L 166 SER L 168 SITE 3 AC1 11 SER L 182 SER L 183 THR L 184 CRYST1 68.100 175.560 63.310 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014684 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005696 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015795 0.00000