data_5W20 # _entry.id 5W20 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5W20 pdb_00005w20 10.2210/pdb5w20/pdb WWPDB D_1000228287 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-08-23 2 'Structure model' 1 1 2017-08-30 3 'Structure model' 1 2 2017-09-13 4 'Structure model' 1 3 2018-10-24 5 'Structure model' 1 4 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' citation 5 4 'Structure model' citation_author 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' database_2 9 5 'Structure model' pdbx_struct_conn_angle 10 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_abbrev' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.pdbx_database_id_PubMed' 5 2 'Structure model' '_citation.title' 6 2 'Structure model' '_citation_author.name' 7 3 'Structure model' '_citation.page_last' 8 4 'Structure model' '_citation.journal_volume' 9 4 'Structure model' '_citation.page_first' 10 4 'Structure model' '_citation.page_last' 11 4 'Structure model' '_citation.year' 12 4 'Structure model' '_citation_author.name' 13 5 'Structure model' '_database_2.pdbx_DOI' 14 5 'Structure model' '_database_2.pdbx_database_accession' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 23 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 24 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 25 5 'Structure model' '_pdbx_struct_conn_angle.value' 26 5 'Structure model' '_struct_conn.pdbx_dist_value' 27 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 34 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 35 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 38 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 39 5 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5W20 _pdbx_database_status.recvd_initial_deposition_date 2017-06-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 5W1Z _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pallan, P.S.' 1 ? 'Egli, M.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'J. Biomol. Struct. Dyn.' _citation.journal_id_ASTM JBSDD6 _citation.journal_id_CSD 0646 _citation.journal_id_ISSN 1538-0254 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 36 _citation.language ? _citation.page_first 2753 _citation.page_last 2772 _citation.title 'Comparative analysis of inosine-substituted duplex DNA by circular dichroism and X-ray crystallography.' _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1080/07391102.2017.1369164 _citation.pdbx_database_id_PubMed 28818035 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Peters, J.P.' 1 ? primary 'Kowal, E.A.' 2 ? primary 'Pallan, P.S.' 3 ? primary 'Egli, M.' 4 ? primary 'Maher 3rd., L.J.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*CP*CP*AP*IP*IP*CP*CP*TP*GP*G)-3') ; 3015.965 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 3 water nat water 18.015 179 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(DI)(DI)(DC)(DC)(DT)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCAIICCTGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DI n 1 5 DI n 1 6 DC n 1 7 DC n 1 8 DT n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DI 'DNA linking' y "2'-DEOXYINOSINE-5'-MONOPHOSPHATE" ? 'C10 H13 N4 O7 P' 332.207 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC DC A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DA 3 3 3 DA DA A . n A 1 4 DI 4 4 4 DI DI A . n A 1 5 DI 5 5 5 DI DI A . n A 1 6 DC 6 6 6 DC DC A . n A 1 7 DC 7 7 7 DC DC A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DG 10 10 10 DG DG A . n B 1 1 DC 1 1 1 DC DC B . n B 1 2 DC 2 2 2 DC DC B . n B 1 3 DA 3 3 3 DA DA B . n B 1 4 DI 4 4 4 DI DI B . n B 1 5 DI 5 5 5 DI DI B . n B 1 6 DC 6 6 6 DC DC B . n B 1 7 DC 7 7 7 DC DC B . n B 1 8 DT 8 8 8 DT DT B . n B 1 9 DG 9 9 9 DG DG B . n B 1 10 DG 10 10 10 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 101 1 MG MG A . D 2 MG 1 102 3 MG MG A . E 2 MG 1 103 5 MG MG A . F 2 MG 1 101 2 MG MG B . G 2 MG 1 102 4 MG MG B . H 2 MG 1 103 6 MG MG B . I 3 HOH 1 201 99 HOH HOH A . I 3 HOH 2 202 51 HOH HOH A . I 3 HOH 3 203 91 HOH HOH A . I 3 HOH 4 204 134 HOH HOH A . I 3 HOH 5 205 143 HOH HOH A . I 3 HOH 6 206 4 HOH HOH A . I 3 HOH 7 207 92 HOH HOH A . I 3 HOH 8 208 45 HOH HOH A . I 3 HOH 9 209 55 HOH HOH A . I 3 HOH 10 210 29 HOH HOH A . I 3 HOH 11 211 81 HOH HOH A . I 3 HOH 12 212 25 HOH HOH A . I 3 HOH 13 213 169 HOH HOH A . I 3 HOH 14 214 135 HOH HOH A . I 3 HOH 15 215 178 HOH HOH A . I 3 HOH 16 216 26 HOH HOH A . I 3 HOH 17 217 31 HOH HOH A . I 3 HOH 18 218 104 HOH HOH A . I 3 HOH 19 219 43 HOH HOH A . I 3 HOH 20 220 163 HOH HOH A . I 3 HOH 21 221 49 HOH HOH A . I 3 HOH 22 222 103 HOH HOH A . I 3 HOH 23 223 11 HOH HOH A . I 3 HOH 24 224 3 HOH HOH A . I 3 HOH 25 225 68 HOH HOH A . I 3 HOH 26 226 21 HOH HOH A . I 3 HOH 27 227 160 HOH HOH A . I 3 HOH 28 228 105 HOH HOH A . I 3 HOH 29 229 154 HOH HOH A . I 3 HOH 30 230 30 HOH HOH A . I 3 HOH 31 231 56 HOH HOH A . I 3 HOH 32 232 22 HOH HOH A . I 3 HOH 33 233 37 HOH HOH A . I 3 HOH 34 234 36 HOH HOH A . I 3 HOH 35 235 69 HOH HOH A . I 3 HOH 36 236 50 HOH HOH A . I 3 HOH 37 237 28 HOH HOH A . I 3 HOH 38 238 78 HOH HOH A . I 3 HOH 39 239 80 HOH HOH A . I 3 HOH 40 240 27 HOH HOH A . I 3 HOH 41 241 46 HOH HOH A . I 3 HOH 42 242 157 HOH HOH A . I 3 HOH 43 243 95 HOH HOH A . I 3 HOH 44 244 33 HOH HOH A . I 3 HOH 45 245 166 HOH HOH A . I 3 HOH 46 246 44 HOH HOH A . I 3 HOH 47 247 118 HOH HOH A . I 3 HOH 48 248 60 HOH HOH A . I 3 HOH 49 249 139 HOH HOH A . I 3 HOH 50 250 5 HOH HOH A . I 3 HOH 51 251 150 HOH HOH A . I 3 HOH 52 252 59 HOH HOH A . I 3 HOH 53 253 47 HOH HOH A . I 3 HOH 54 254 156 HOH HOH A . I 3 HOH 55 255 170 HOH HOH A . I 3 HOH 56 256 167 HOH HOH A . I 3 HOH 57 257 144 HOH HOH A . I 3 HOH 58 258 100 HOH HOH A . I 3 HOH 59 259 153 HOH HOH A . I 3 HOH 60 260 6 HOH HOH A . I 3 HOH 61 261 9 HOH HOH A . I 3 HOH 62 262 152 HOH HOH A . I 3 HOH 63 263 52 HOH HOH A . I 3 HOH 64 264 155 HOH HOH A . I 3 HOH 65 265 79 HOH HOH A . I 3 HOH 66 266 140 HOH HOH A . I 3 HOH 67 267 159 HOH HOH A . I 3 HOH 68 268 48 HOH HOH A . I 3 HOH 69 269 117 HOH HOH A . I 3 HOH 70 270 8 HOH HOH A . I 3 HOH 71 271 54 HOH HOH A . I 3 HOH 72 272 74 HOH HOH A . I 3 HOH 73 273 102 HOH HOH A . I 3 HOH 74 274 82 HOH HOH A . I 3 HOH 75 275 132 HOH HOH A . I 3 HOH 76 276 94 HOH HOH A . I 3 HOH 77 277 101 HOH HOH A . I 3 HOH 78 278 122 HOH HOH A . I 3 HOH 79 279 106 HOH HOH A . I 3 HOH 80 280 58 HOH HOH A . I 3 HOH 81 281 83 HOH HOH A . I 3 HOH 82 282 133 HOH HOH A . I 3 HOH 83 283 145 HOH HOH A . I 3 HOH 84 284 24 HOH HOH A . J 3 HOH 1 201 177 HOH HOH B . J 3 HOH 2 202 168 HOH HOH B . J 3 HOH 3 203 72 HOH HOH B . J 3 HOH 4 204 130 HOH HOH B . J 3 HOH 5 205 129 HOH HOH B . J 3 HOH 6 206 113 HOH HOH B . J 3 HOH 7 207 151 HOH HOH B . J 3 HOH 8 208 89 HOH HOH B . J 3 HOH 9 209 98 HOH HOH B . J 3 HOH 10 210 108 HOH HOH B . J 3 HOH 11 211 2 HOH HOH B . J 3 HOH 12 212 174 HOH HOH B . J 3 HOH 13 213 84 HOH HOH B . J 3 HOH 14 214 19 HOH HOH B . J 3 HOH 15 215 123 HOH HOH B . J 3 HOH 16 216 41 HOH HOH B . J 3 HOH 17 217 175 HOH HOH B . J 3 HOH 18 218 35 HOH HOH B . J 3 HOH 19 219 107 HOH HOH B . J 3 HOH 20 220 149 HOH HOH B . J 3 HOH 21 221 34 HOH HOH B . J 3 HOH 22 222 97 HOH HOH B . J 3 HOH 23 223 128 HOH HOH B . J 3 HOH 24 224 126 HOH HOH B . J 3 HOH 25 225 18 HOH HOH B . J 3 HOH 26 226 15 HOH HOH B . J 3 HOH 27 227 42 HOH HOH B . J 3 HOH 28 228 57 HOH HOH B . J 3 HOH 29 229 64 HOH HOH B . J 3 HOH 30 230 71 HOH HOH B . J 3 HOH 31 231 138 HOH HOH B . J 3 HOH 32 232 119 HOH HOH B . J 3 HOH 33 233 66 HOH HOH B . J 3 HOH 34 234 148 HOH HOH B . J 3 HOH 35 235 76 HOH HOH B . J 3 HOH 36 236 73 HOH HOH B . J 3 HOH 37 237 16 HOH HOH B . J 3 HOH 38 238 38 HOH HOH B . J 3 HOH 39 239 63 HOH HOH B . J 3 HOH 40 240 23 HOH HOH B . J 3 HOH 41 241 114 HOH HOH B . J 3 HOH 42 242 20 HOH HOH B . J 3 HOH 43 243 115 HOH HOH B . J 3 HOH 44 244 7 HOH HOH B . J 3 HOH 45 245 93 HOH HOH B . J 3 HOH 46 246 110 HOH HOH B . J 3 HOH 47 247 10 HOH HOH B . J 3 HOH 48 248 70 HOH HOH B . J 3 HOH 49 249 131 HOH HOH B . J 3 HOH 50 250 86 HOH HOH B . J 3 HOH 51 251 65 HOH HOH B . J 3 HOH 52 252 112 HOH HOH B . J 3 HOH 53 253 179 HOH HOH B . J 3 HOH 54 254 77 HOH HOH B . J 3 HOH 55 255 53 HOH HOH B . J 3 HOH 56 256 40 HOH HOH B . J 3 HOH 57 257 17 HOH HOH B . J 3 HOH 58 258 39 HOH HOH B . J 3 HOH 59 259 13 HOH HOH B . J 3 HOH 60 260 62 HOH HOH B . J 3 HOH 61 261 61 HOH HOH B . J 3 HOH 62 262 111 HOH HOH B . J 3 HOH 63 263 116 HOH HOH B . J 3 HOH 64 264 75 HOH HOH B . J 3 HOH 65 265 176 HOH HOH B . J 3 HOH 66 266 127 HOH HOH B . J 3 HOH 67 267 121 HOH HOH B . J 3 HOH 68 268 173 HOH HOH B . J 3 HOH 69 269 141 HOH HOH B . J 3 HOH 70 270 1 HOH HOH B . J 3 HOH 71 271 12 HOH HOH B . J 3 HOH 72 272 164 HOH HOH B . J 3 HOH 73 273 165 HOH HOH B . J 3 HOH 74 274 67 HOH HOH B . J 3 HOH 75 275 87 HOH HOH B . J 3 HOH 76 276 32 HOH HOH B . J 3 HOH 77 277 146 HOH HOH B . J 3 HOH 78 278 96 HOH HOH B . J 3 HOH 79 279 158 HOH HOH B . J 3 HOH 80 280 171 HOH HOH B . J 3 HOH 81 281 124 HOH HOH B . J 3 HOH 82 282 14 HOH HOH B . J 3 HOH 83 283 172 HOH HOH B . J 3 HOH 84 284 88 HOH HOH B . J 3 HOH 85 285 147 HOH HOH B . J 3 HOH 86 286 125 HOH HOH B . J 3 HOH 87 287 90 HOH HOH B . J 3 HOH 88 288 85 HOH HOH B . J 3 HOH 89 289 162 HOH HOH B . J 3 HOH 90 290 142 HOH HOH B . J 3 HOH 91 291 136 HOH HOH B . J 3 HOH 92 292 180 HOH HOH B . J 3 HOH 93 293 161 HOH HOH B . J 3 HOH 94 294 120 HOH HOH B . J 3 HOH 95 295 109 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0158 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _cell.entry_id 5W20 _cell.length_a 34.190 _cell.length_b 35.043 _cell.length_c 41.336 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5W20 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5W20 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.05 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 40.08 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;Droplets (2 uL) containing oligonucleotide (0.23 mM), sodium cacodylate (25 mM, pH 6.5), magnesium acetate (12.5 mM), and 2-methyl-2,4-pentanediol (MPD, 20% v/v) that were equilibrated against a 1 mL reservoir of sodium cacodylate (50 mM, pH 6.5), magnesium acetate (25 mM), and MPD (40%) v/v) ; _exptl_crystal_grow.pdbx_pH_range 6.5 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-06-22 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator Si _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97625 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5W20 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.36 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11019 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 5 _reflns.percent_possible_obs 99.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.7 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 30.57 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.36 _reflns_shell.d_res_low 1.41 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1002 _reflns_shell.percent_possible_all 95.0 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.343 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 7.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.133 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5W20 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 10415 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 26.73 _refine.ls_d_res_high 1.36 _refine.ls_percent_reflns_obs 99.47 _refine.ls_R_factor_obs 0.14922 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.14750 _refine.ls_R_factor_R_free 0.18090 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 569 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.974 _refine.correlation_coeff_Fo_to_Fc_free 0.963 _refine.B_iso_mean 11.216 _refine.aniso_B[1][1] 0.33 _refine.aniso_B[2][2] -0.59 _refine.aniso_B[3][3] 0.26 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.058 _refine.pdbx_overall_ESU_R_Free 0.062 _refine.overall_SU_ML 0.036 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.870 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 400 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 179 _refine_hist.number_atoms_total 585 _refine_hist.d_res_high 1.36 _refine_hist.d_res_low 26.73 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.011 ? 494 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 237 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.607 1.178 ? 762 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.626 3.000 ? 570 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 68 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.036 0.020 ? 254 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.006 0.020 ? 100 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.008 0.892 ? 494 'X-RAY DIFFRACTION' ? r_scbond_other 1.005 0.892 ? 493 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 1.436 1.348 ? 761 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.107 10.586 ? 737 'X-RAY DIFFRACTION' ? r_long_range_B_other 3.628 8.981 ? 682 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.364 _refine_ls_shell.d_res_low 1.399 _refine_ls_shell.number_reflns_R_work 743 _refine_ls_shell.R_factor_R_work 0.202 _refine_ls_shell.percent_reflns_obs 98.61 _refine_ls_shell.R_factor_R_free 0.285 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 40 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 5W20 _struct.title 'Crystal Structure of inosine-substituted duplex DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5W20 _struct_keywords.text 'Inosine, DNA crystal structure, deoxyinonsine, circular dichroism of modified DNA, DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5W20 _struct_ref.pdbx_db_accession 5W20 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5W20 A 1 ? 10 ? 5W20 1 ? 10 ? 1 10 2 1 5W20 B 1 ? 10 ? 5W20 1 ? 10 ? 1 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1370 ? 1 MORE -33 ? 1 'SSA (A^2)' 3930 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? C MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 101 A HOH 206 3_545 ? ? ? ? ? ? ? 2.087 ? ? metalc2 metalc ? ? C MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 101 A HOH 224 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 101 A HOH 250 1_555 ? ? ? ? ? ? ? 2.130 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 101 A HOH 260 3_545 ? ? ? ? ? ? ? 2.054 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 101 B HOH 211 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 101 B HOH 270 1_555 ? ? ? ? ? ? ? 2.081 ? ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 102 A HOH 212 1_555 ? ? ? ? ? ? ? 2.077 ? ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 102 A HOH 226 1_555 ? ? ? ? ? ? ? 1.895 ? ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 102 A HOH 232 1_555 ? ? ? ? ? ? ? 1.998 ? ? metalc10 metalc ? ? D MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 102 A HOH 284 1_555 ? ? ? ? ? ? ? 2.094 ? ? metalc11 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 102 B HOH 240 3_555 ? ? ? ? ? ? ? 2.037 ? ? metalc12 metalc ? ? D MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 102 B HOH 285 3_555 ? ? ? ? ? ? ? 2.232 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 103 A HOH 202 2_454 ? ? ? ? ? ? ? 2.198 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 103 A HOH 229 1_555 ? ? ? ? ? ? ? 2.162 ? ? metalc15 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 103 A HOH 236 2_454 ? ? ? ? ? ? ? 2.087 ? ? metalc16 metalc ? ? E MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 103 A HOH 271 2_454 ? ? ? ? ? ? ? 2.088 ? ? metalc17 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 103 B HOH 245 3_555 ? ? ? ? ? ? ? 2.021 ? ? metalc18 metalc ? ? E MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 103 B HOH 255 3_555 ? ? ? ? ? ? ? 1.825 ? ? metalc19 metalc ? ? I HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 223 B MG 102 1_555 ? ? ? ? ? ? ? 2.108 ? ? metalc20 metalc ? ? I HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 261 B MG 102 1_555 ? ? ? ? ? ? ? 2.069 ? ? metalc21 metalc ? ? I HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 270 B MG 102 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc22 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 225 2_454 ? ? ? ? ? ? ? 2.092 ? ? metalc23 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 226 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc24 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 237 1_555 ? ? ? ? ? ? ? 2.156 ? ? metalc25 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 257 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc26 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 259 2_454 ? ? ? ? ? ? ? 2.085 ? ? metalc27 metalc ? ? F MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 101 B HOH 282 2_454 ? ? ? ? ? ? ? 2.006 ? ? metalc28 metalc ? ? G MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 102 B HOH 244 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc29 metalc ? ? G MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 102 B HOH 247 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc30 metalc ? ? G MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 102 B HOH 271 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc31 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 103 B HOH 246 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc32 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 103 B HOH 248 1_455 ? ? ? ? ? ? ? 2.102 ? ? metalc33 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 103 B HOH 262 1_555 ? ? ? ? ? ? ? 2.332 ? ? metalc34 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 103 B HOH 268 3_445 ? ? ? ? ? ? ? 2.231 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 A ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 B ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 A ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 B ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 A ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 B ? A DC 2 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DI 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DI 4 B DC 7 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog13 hydrog ? ? A DI 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DI 4 B DC 7 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog14 hydrog ? ? A DI 5 N1 ? ? ? 1_555 B DC 6 N3 ? ? A DI 5 B DC 6 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog15 hydrog ? ? A DI 5 O6 ? ? ? 1_555 B DC 6 N4 ? ? A DI 5 B DC 6 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog16 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DI 5 N1 ? ? A DC 6 B DI 5 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog17 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DI 5 O6 ? ? A DC 6 B DI 5 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog18 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DI 4 N1 ? ? A DC 7 B DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog19 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DI 4 O6 ? ? A DC 7 B DI 4 1_555 ? ? ? ? ? ? TYPE_29_PAIR ? ? ? hydrog20 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 2 N3 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 2 O2 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 2 N4 ? ? A DG 9 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 10 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? I HOH . ? A HOH 206 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 224 ? 1_555 95.3 ? 2 O ? I HOH . ? A HOH 206 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 250 ? 1_555 88.4 ? 3 O ? I HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 250 ? 1_555 87.4 ? 4 O ? I HOH . ? A HOH 206 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 260 ? 3_545 90.1 ? 5 O ? I HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 260 ? 3_545 88.1 ? 6 O ? I HOH . ? A HOH 250 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? I HOH . ? A HOH 260 ? 3_545 175.1 ? 7 O ? I HOH . ? A HOH 206 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 173.7 ? 8 O ? I HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 90.9 ? 9 O ? I HOH . ? A HOH 250 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 90.7 ? 10 O ? I HOH . ? A HOH 260 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 211 ? 1_555 91.2 ? 11 O ? I HOH . ? A HOH 206 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 270 ? 1_555 88.9 ? 12 O ? I HOH . ? A HOH 224 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 270 ? 1_555 175.7 ? 13 O ? I HOH . ? A HOH 250 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 270 ? 1_555 91.9 ? 14 O ? I HOH . ? A HOH 260 ? 3_545 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 270 ? 1_555 92.7 ? 15 O ? J HOH . ? B HOH 211 ? 1_555 MG ? C MG . ? A MG 101 ? 1_555 O ? J HOH . ? B HOH 270 ? 1_555 84.8 ? 16 O ? I HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 226 ? 1_555 91.9 ? 17 O ? I HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 232 ? 1_555 86.9 ? 18 O ? I HOH . ? A HOH 226 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 232 ? 1_555 92.9 ? 19 O ? I HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 284 ? 1_555 176.3 ? 20 O ? I HOH . ? A HOH 226 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 284 ? 1_555 91.6 ? 21 O ? I HOH . ? A HOH 232 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? I HOH . ? A HOH 284 ? 1_555 91.7 ? 22 O ? I HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 240 ? 3_555 84.7 ? 23 O ? I HOH . ? A HOH 226 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 240 ? 3_555 97.3 ? 24 O ? I HOH . ? A HOH 232 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 240 ? 3_555 167.0 ? 25 O ? I HOH . ? A HOH 284 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 240 ? 3_555 96.1 ? 26 O ? I HOH . ? A HOH 212 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 285 ? 3_555 90.4 ? 27 O ? I HOH . ? A HOH 226 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 285 ? 3_555 175.0 ? 28 O ? I HOH . ? A HOH 232 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 285 ? 3_555 82.8 ? 29 O ? I HOH . ? A HOH 284 ? 1_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 285 ? 3_555 86.1 ? 30 O ? J HOH . ? B HOH 240 ? 3_555 MG ? D MG . ? A MG 102 ? 1_555 O ? J HOH . ? B HOH 285 ? 3_555 87.3 ? 31 O ? I HOH . ? A HOH 202 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 229 ? 1_555 81.3 ? 32 O ? I HOH . ? A HOH 202 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 236 ? 2_454 92.5 ? 33 O ? I HOH . ? A HOH 229 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 236 ? 2_454 169.2 ? 34 O ? I HOH . ? A HOH 202 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 271 ? 2_454 85.8 ? 35 O ? I HOH . ? A HOH 229 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 271 ? 2_454 102.6 ? 36 O ? I HOH . ? A HOH 236 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? I HOH . ? A HOH 271 ? 2_454 85.6 ? 37 O ? I HOH . ? A HOH 202 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 245 ? 3_555 168.5 ? 38 O ? I HOH . ? A HOH 229 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 245 ? 3_555 95.6 ? 39 O ? I HOH . ? A HOH 236 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 245 ? 3_555 92.2 ? 40 O ? I HOH . ? A HOH 271 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 245 ? 3_555 84.1 ? 41 O ? I HOH . ? A HOH 202 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 255 ? 3_555 102.8 ? 42 O ? I HOH . ? A HOH 229 ? 1_555 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 255 ? 3_555 78.7 ? 43 O ? I HOH . ? A HOH 236 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 255 ? 3_555 94.3 ? 44 O ? I HOH . ? A HOH 271 ? 2_454 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 255 ? 3_555 171.4 ? 45 O ? J HOH . ? B HOH 245 ? 3_555 MG ? E MG . ? A MG 103 ? 1_555 O ? J HOH . ? B HOH 255 ? 3_555 87.3 ? 46 O ? I HOH . ? A HOH 223 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? I HOH . ? A HOH 261 ? 1_555 86.1 ? 47 O ? I HOH . ? A HOH 223 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? I HOH . ? A HOH 270 ? 1_555 93.4 ? 48 O ? I HOH . ? A HOH 261 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? I HOH . ? A HOH 270 ? 1_555 86.9 ? 49 O ? I HOH . ? A HOH 223 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 244 ? 1_555 90.1 ? 50 O ? I HOH . ? A HOH 261 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 244 ? 1_555 171.2 ? 51 O ? I HOH . ? A HOH 270 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 244 ? 1_555 85.4 ? 52 O ? I HOH . ? A HOH 223 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 247 ? 1_555 88.4 ? 53 O ? I HOH . ? A HOH 261 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 247 ? 1_555 96.9 ? 54 O ? I HOH . ? A HOH 270 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 247 ? 1_555 175.9 ? 55 O ? J HOH . ? B HOH 244 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 247 ? 1_555 90.9 ? 56 O ? I HOH . ? A HOH 223 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 271 ? 1_555 174.7 ? 57 O ? I HOH . ? A HOH 261 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 271 ? 1_555 90.2 ? 58 O ? I HOH . ? A HOH 270 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 271 ? 1_555 90.1 ? 59 O ? J HOH . ? B HOH 244 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 271 ? 1_555 94.1 ? 60 O ? J HOH . ? B HOH 247 ? 1_555 MG ? G MG . ? B MG 102 ? 1_555 O ? J HOH . ? B HOH 271 ? 1_555 88.3 ? 61 O ? J HOH . ? B HOH 225 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 226 ? 1_555 89.9 ? 62 O ? J HOH . ? B HOH 225 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 237 ? 1_555 93.7 ? 63 O ? J HOH . ? B HOH 226 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 237 ? 1_555 86.7 ? 64 O ? J HOH . ? B HOH 225 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 257 ? 1_555 176.7 ? 65 O ? J HOH . ? B HOH 226 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 257 ? 1_555 87.8 ? 66 O ? J HOH . ? B HOH 237 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 257 ? 1_555 88.4 ? 67 O ? J HOH . ? B HOH 225 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 259 ? 2_454 89.2 ? 68 O ? J HOH . ? B HOH 226 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 259 ? 2_454 174.1 ? 69 O ? J HOH . ? B HOH 237 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 259 ? 2_454 87.5 ? 70 O ? J HOH . ? B HOH 257 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 259 ? 2_454 93.3 ? 71 O ? J HOH . ? B HOH 225 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 282 ? 2_454 90.2 ? 72 O ? J HOH . ? B HOH 226 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 282 ? 2_454 93.4 ? 73 O ? J HOH . ? B HOH 237 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 282 ? 2_454 176.0 ? 74 O ? J HOH . ? B HOH 257 ? 1_555 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 282 ? 2_454 87.6 ? 75 O ? J HOH . ? B HOH 259 ? 2_454 MG ? F MG . ? B MG 101 ? 1_555 O ? J HOH . ? B HOH 282 ? 2_454 92.5 ? 76 O ? J HOH . ? B HOH 246 ? 1_555 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 248 ? 1_455 86.7 ? 77 O ? J HOH . ? B HOH 246 ? 1_555 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 262 ? 1_555 92.6 ? 78 O ? J HOH . ? B HOH 248 ? 1_455 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 262 ? 1_555 93.1 ? 79 O ? J HOH . ? B HOH 246 ? 1_555 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 268 ? 3_445 167.0 ? 80 O ? J HOH . ? B HOH 248 ? 1_455 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 268 ? 3_445 93.1 ? 81 O ? J HOH . ? B HOH 262 ? 1_555 MG ? H MG . ? B MG 103 ? 1_555 O ? J HOH . ? B HOH 268 ? 3_445 74.4 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 101 ? 6 'binding site for residue MG A 101' AC2 Software A MG 102 ? 6 'binding site for residue MG A 102' AC3 Software A MG 103 ? 6 'binding site for residue MG A 103' AC4 Software B MG 101 ? 6 'binding site for residue MG B 101' AC5 Software B MG 102 ? 6 'binding site for residue MG B 102' AC6 Software B MG 103 ? 4 'binding site for residue MG B 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HOH I . ? HOH A 206 . ? 3_545 ? 2 AC1 6 HOH I . ? HOH A 224 . ? 1_555 ? 3 AC1 6 HOH I . ? HOH A 250 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 260 . ? 3_545 ? 5 AC1 6 HOH J . ? HOH B 211 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH B 270 . ? 1_555 ? 7 AC2 6 HOH I . ? HOH A 212 . ? 1_555 ? 8 AC2 6 HOH I . ? HOH A 226 . ? 1_555 ? 9 AC2 6 HOH I . ? HOH A 232 . ? 1_555 ? 10 AC2 6 HOH I . ? HOH A 284 . ? 1_555 ? 11 AC2 6 HOH J . ? HOH B 240 . ? 3_555 ? 12 AC2 6 HOH J . ? HOH B 285 . ? 3_555 ? 13 AC3 6 HOH I . ? HOH A 202 . ? 2_454 ? 14 AC3 6 HOH I . ? HOH A 229 . ? 1_555 ? 15 AC3 6 HOH I . ? HOH A 236 . ? 2_454 ? 16 AC3 6 HOH I . ? HOH A 271 . ? 2_454 ? 17 AC3 6 HOH J . ? HOH B 245 . ? 3_555 ? 18 AC3 6 HOH J . ? HOH B 255 . ? 3_555 ? 19 AC4 6 HOH J . ? HOH B 225 . ? 2_454 ? 20 AC4 6 HOH J . ? HOH B 226 . ? 1_555 ? 21 AC4 6 HOH J . ? HOH B 237 . ? 1_555 ? 22 AC4 6 HOH J . ? HOH B 257 . ? 1_555 ? 23 AC4 6 HOH J . ? HOH B 259 . ? 2_454 ? 24 AC4 6 HOH J . ? HOH B 282 . ? 2_454 ? 25 AC5 6 HOH I . ? HOH A 223 . ? 1_555 ? 26 AC5 6 HOH I . ? HOH A 261 . ? 1_555 ? 27 AC5 6 HOH I . ? HOH A 270 . ? 1_555 ? 28 AC5 6 HOH J . ? HOH B 244 . ? 1_555 ? 29 AC5 6 HOH J . ? HOH B 247 . ? 1_555 ? 30 AC5 6 HOH J . ? HOH B 271 . ? 1_555 ? 31 AC6 4 HOH J . ? HOH B 246 . ? 1_555 ? 32 AC6 4 HOH J . ? HOH B 248 . ? 1_455 ? 33 AC6 4 HOH J . ? HOH B 262 . ? 1_555 ? 34 AC6 4 HOH J . ? HOH B 268 . ? 3_445 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 201 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 233 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 214 ? ? 1_555 O A HOH 238 ? ? 3_455 2.15 2 1 O A HOH 265 ? ? 1_555 O B HOH 283 ? ? 3_445 2.17 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 1 ? ? 0.068 'SIDE CHAIN' 2 1 DG A 9 ? ? 0.057 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DI OP3 O N N 108 DI P P N N 109 DI OP1 O N N 110 DI OP2 O N N 111 DI "O5'" O N N 112 DI "C5'" C N N 113 DI "C4'" C N R 114 DI "O4'" O N N 115 DI "C3'" C N S 116 DI "O3'" O N N 117 DI "C2'" C N N 118 DI "C1'" C N R 119 DI N9 N Y N 120 DI C8 C Y N 121 DI N7 N Y N 122 DI C5 C Y N 123 DI C6 C N N 124 DI O6 O N N 125 DI N1 N N N 126 DI C2 C N N 127 DI N3 N N N 128 DI C4 C Y N 129 DI HOP3 H N N 130 DI HOP2 H N N 131 DI "H5'" H N N 132 DI "H5''" H N N 133 DI "H4'" H N N 134 DI "H3'" H N N 135 DI "HO3'" H N N 136 DI "H2'" H N N 137 DI "H2''" H N N 138 DI "H1'" H N N 139 DI H8 H N N 140 DI H1 H N N 141 DI H2 H N N 142 DT OP3 O N N 143 DT P P N N 144 DT OP1 O N N 145 DT OP2 O N N 146 DT "O5'" O N N 147 DT "C5'" C N N 148 DT "C4'" C N R 149 DT "O4'" O N N 150 DT "C3'" C N S 151 DT "O3'" O N N 152 DT "C2'" C N N 153 DT "C1'" C N R 154 DT N1 N N N 155 DT C2 C N N 156 DT O2 O N N 157 DT N3 N N N 158 DT C4 C N N 159 DT O4 O N N 160 DT C5 C N N 161 DT C7 C N N 162 DT C6 C N N 163 DT HOP3 H N N 164 DT HOP2 H N N 165 DT "H5'" H N N 166 DT "H5''" H N N 167 DT "H4'" H N N 168 DT "H3'" H N N 169 DT "HO3'" H N N 170 DT "H2'" H N N 171 DT "H2''" H N N 172 DT "H1'" H N N 173 DT H3 H N N 174 DT H71 H N N 175 DT H72 H N N 176 DT H73 H N N 177 DT H6 H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 MG MG MG N N 182 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DI OP3 P sing N N 113 DI OP3 HOP3 sing N N 114 DI P OP1 doub N N 115 DI P OP2 sing N N 116 DI P "O5'" sing N N 117 DI OP2 HOP2 sing N N 118 DI "O5'" "C5'" sing N N 119 DI "C5'" "C4'" sing N N 120 DI "C5'" "H5'" sing N N 121 DI "C5'" "H5''" sing N N 122 DI "C4'" "O4'" sing N N 123 DI "C4'" "C3'" sing N N 124 DI "C4'" "H4'" sing N N 125 DI "O4'" "C1'" sing N N 126 DI "C3'" "O3'" sing N N 127 DI "C3'" "C2'" sing N N 128 DI "C3'" "H3'" sing N N 129 DI "O3'" "HO3'" sing N N 130 DI "C2'" "C1'" sing N N 131 DI "C2'" "H2'" sing N N 132 DI "C2'" "H2''" sing N N 133 DI "C1'" N9 sing N N 134 DI "C1'" "H1'" sing N N 135 DI N9 C8 sing Y N 136 DI N9 C4 sing Y N 137 DI C8 N7 doub Y N 138 DI C8 H8 sing N N 139 DI N7 C5 sing Y N 140 DI C5 C6 sing N N 141 DI C5 C4 doub Y N 142 DI C6 O6 doub N N 143 DI C6 N1 sing N N 144 DI N1 C2 sing N N 145 DI N1 H1 sing N N 146 DI C2 N3 doub N N 147 DI C2 H2 sing N N 148 DI N3 C4 sing N N 149 DT OP3 P sing N N 150 DT OP3 HOP3 sing N N 151 DT P OP1 doub N N 152 DT P OP2 sing N N 153 DT P "O5'" sing N N 154 DT OP2 HOP2 sing N N 155 DT "O5'" "C5'" sing N N 156 DT "C5'" "C4'" sing N N 157 DT "C5'" "H5'" sing N N 158 DT "C5'" "H5''" sing N N 159 DT "C4'" "O4'" sing N N 160 DT "C4'" "C3'" sing N N 161 DT "C4'" "H4'" sing N N 162 DT "O4'" "C1'" sing N N 163 DT "C3'" "O3'" sing N N 164 DT "C3'" "C2'" sing N N 165 DT "C3'" "H3'" sing N N 166 DT "O3'" "HO3'" sing N N 167 DT "C2'" "C1'" sing N N 168 DT "C2'" "H2'" sing N N 169 DT "C2'" "H2''" sing N N 170 DT "C1'" N1 sing N N 171 DT "C1'" "H1'" sing N N 172 DT N1 C2 sing N N 173 DT N1 C6 sing N N 174 DT C2 O2 doub N N 175 DT C2 N3 sing N N 176 DT N3 C4 sing N N 177 DT N3 H3 sing N N 178 DT C4 O4 doub N N 179 DT C4 C5 sing N N 180 DT C5 C7 sing N N 181 DT C5 C6 doub N N 182 DT C7 H71 sing N N 183 DT C7 H72 sing N N 184 DT C7 H73 sing N N 185 DT C6 H6 sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5W20 'double helix' 5W20 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.216 -0.105 0.167 -4.973 -13.544 -0.978 1 A_DC1:DG10_B A 1 ? B 10 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.502 0.070 0.050 2.348 -14.016 2.044 2 A_DC2:DG9_B A 2 ? B 9 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 0.028 -0.109 0.061 1.916 -7.951 -0.030 3 A_DA3:DT8_B A 3 ? B 8 ? 20 1 1 A DI 4 1_555 B DC 7 1_555 -0.426 -0.258 -0.091 -0.950 -19.349 7.612 4 A_DI4:DC7_B A 4 ? B 7 ? 29 1 1 A DI 5 1_555 B DC 6 1_555 -0.250 -0.229 0.061 -1.076 -16.226 4.688 5 A_DI5:DC6_B A 5 ? B 6 ? 29 1 1 A DC 6 1_555 B DI 5 1_555 0.310 -0.161 -0.110 -0.126 -16.895 7.222 6 A_DC6:DI5_B A 6 ? B 5 ? 29 1 1 A DC 7 1_555 B DI 4 1_555 0.254 -0.212 0.115 -9.355 -10.883 9.550 7 A_DC7:DI4_B A 7 ? B 4 ? 29 1 1 A DT 8 1_555 B DA 3 1_555 0.018 -0.098 0.110 -4.886 -3.360 1.161 8 A_DT8:DA3_B A 8 ? B 3 ? 20 1 1 A DG 9 1_555 B DC 2 1_555 -0.244 -0.120 0.075 -3.135 -12.615 -0.317 9 A_DG9:DC2_B A 9 ? B 2 ? 19 1 1 A DG 10 1_555 B DC 1 1_555 -0.245 -0.197 0.101 2.334 -13.570 0.250 10 A_DG10:DC1_B A 10 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 -0.443 1.296 3.173 3.210 7.044 34.541 1.090 1.204 3.312 11.681 -5.324 35.372 1 AA_DC1DC2:DG9DG10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A DC 2 1_555 B DG 9 1_555 A DA 3 1_555 B DT 8 1_555 0.156 3.081 3.265 -2.397 -5.913 47.478 4.238 -0.372 2.873 -7.305 2.961 47.880 2 AA_DC2DA3:DT8DG9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A DA 3 1_555 B DT 8 1_555 A DI 4 1_555 B DC 7 1_555 0.424 0.109 3.396 -1.331 9.897 28.711 -1.865 -1.089 3.232 19.238 2.587 30.363 3 AA_DA3DI4:DC7DT8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A DI 4 1_555 B DC 7 1_555 A DI 5 1_555 B DC 6 1_555 0.343 -0.135 3.159 0.398 3.014 30.823 -0.814 -0.567 3.135 5.653 -0.747 30.969 4 AA_DI4DI5:DC6DC7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A DI 5 1_555 B DC 6 1_555 A DC 6 1_555 B DI 5 1_555 -0.290 0.551 3.216 0.638 -7.255 45.734 1.300 0.422 3.095 -9.266 -0.814 46.279 5 AA_DI5DC6:DI5DC6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A DC 6 1_555 B DI 5 1_555 A DC 7 1_555 B DI 4 1_555 1.117 0.114 3.343 2.626 5.332 39.171 -0.478 -1.330 3.394 7.898 -3.890 39.602 6 AA_DC6DC7:DI4DI5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A DC 7 1_555 B DI 4 1_555 A DT 8 1_555 B DA 3 1_555 -0.591 0.472 3.284 2.092 13.307 25.471 -2.142 1.677 3.087 27.836 -4.377 28.762 7 AA_DC7DT8:DA3DI4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A DT 8 1_555 B DA 3 1_555 A DG 9 1_555 B DC 2 1_555 -0.384 3.271 3.238 0.307 -5.659 49.139 4.303 0.480 2.865 -6.779 -0.367 49.445 8 AA_DT8DG9:DC2DA3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A DG 9 1_555 B DC 2 1_555 A DG 10 1_555 B DC 1 1_555 0.889 1.537 3.395 -4.899 9.721 29.949 0.864 -2.598 3.525 18.076 9.110 31.823 9 AA_DG9DG10:DC1DC2_BB A 9 ? B 2 ? A 10 ? B 1 ? # _atom_sites.entry_id 5W20 _atom_sites.fract_transf_matrix[1][1] 0.029248 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028536 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024192 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P # loop_