HEADER HYDROLASE/HYDROLASE INHIBITOR 09-JUN-17 5W44 TITLE CRYSTAL STRUCTURE OF THE INFLUENZA VIRUS PA ENDONUCLEASE IN COMPLEX TITLE 2 WITH INHIBITOR 7A (SRI-29770) COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE ACIDIC PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RNA-DIRECTED RNA POLYMERASE SUBUNIT P2; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 641501; SOURCE 4 STRAIN: SWL A/CALIFORNIA/04/2009 H1N1; SOURCE 5 GENE: PA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS NUCLEASE, TRANSCRIPTION, CAP-SNATCHING, VIRUS, HYDROLASE, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.KUMAR,S.W.WHITE REVDAT 3 04-OCT-23 5W44 1 LINK REVDAT 2 11-DEC-19 5W44 1 REMARK REVDAT 1 10-JAN-18 5W44 0 JRNL AUTH D.BEYLKIN,G.KUMAR,W.ZHOU,J.PARK,T.JEEVAN,C.LAGISETTI, JRNL AUTH 2 R.HARFOOT,R.J.WEBBY,S.W.WHITE,T.R.WEBB JRNL TITL PROTEIN-STRUCTURE ASSISTED OPTIMIZATION OF JRNL TITL 2 4,5-DIHYDROXYPYRIMIDINE-6-CARBOXAMIDE INHIBITORS OF JRNL TITL 3 INFLUENZA VIRUS ENDONUCLEASE. JRNL REF SCI REP V. 7 17139 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 29215062 JRNL DOI 10.1038/S41598-017-17419-6 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 12679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.970 REMARK 3 FREE R VALUE TEST SET COUNT : 757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.5957 - 3.5894 1.00 2548 182 0.1827 0.2002 REMARK 3 2 3.5894 - 2.8494 1.00 2396 144 0.2012 0.2431 REMARK 3 3 2.8494 - 2.4893 1.00 2369 153 0.2000 0.2643 REMARK 3 4 2.4893 - 2.2618 1.00 2352 138 0.2074 0.2695 REMARK 3 5 2.2618 - 2.0997 0.97 2257 140 0.2035 0.2401 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.87 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 51.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1510 REMARK 3 ANGLE : 0.625 2037 REMARK 3 CHIRALITY : 0.046 215 REMARK 3 PLANARITY : 0.004 263 REMARK 3 DIHEDRAL : 16.351 919 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -14.3610 75.9972 14.0938 REMARK 3 T TENSOR REMARK 3 T11: 0.3656 T22: 0.2204 REMARK 3 T33: 0.4094 T12: 0.0166 REMARK 3 T13: 0.0876 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.5974 L22: 3.1580 REMARK 3 L33: 3.2950 L12: -0.0914 REMARK 3 L13: -0.1739 L23: 0.6996 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: 0.1018 S13: -0.4228 REMARK 3 S21: -0.2025 S22: -0.0840 S23: -0.2374 REMARK 3 S31: 0.4884 S32: 0.0776 S33: 0.1333 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W44 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228394. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12718 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 16.50 REMARK 200 R MERGE (I) : 0.09400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.60 REMARK 200 R MERGE FOR SHELL (I) : 0.62400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.7.17 REMARK 200 STARTING MODEL: 5DES REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8.5, 30% PEG 4000, 0.2 M REMARK 280 MGCL2, 2 MM MNCL2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.61500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 85.23000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 42.61500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 85.23000 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 42.61500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 85.23000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 42.61500 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 85.23000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 54 CG CD CE NZ REMARK 470 LYS A 85 CG CD CE NZ REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 ASN A 117 CG OD1 ND2 REMARK 470 LYS A 118 CG CD CE NZ REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 GLU A 122 CG CD OE1 OE2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 107 ND1 HIS A 109 2.16 REMARK 500 O HOH A 450 O HOH A 451 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 55 5.90 82.59 REMARK 500 ARG A 106 -132.76 -98.62 REMARK 500 LYS A 120 22.35 48.93 REMARK 500 THR A 143 -62.03 70.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 301 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 89 OD2 98.3 REMARK 620 3 GLU A 100 OE1 169.1 86.6 REMARK 620 4 ILE A 101 O 89.8 88.5 80.6 REMARK 620 5 GY6 A 302 O08 83.5 178.2 91.7 92.0 REMARK 620 6 GY6 A 302 O05 95.1 103.7 93.1 166.0 75.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 303 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 61 OE1 REMARK 620 2 ASP A 89 OD1 97.8 REMARK 620 3 GY6 A 302 O05 106.3 95.5 REMARK 620 4 GY6 A 302 O12 88.9 172.8 80.0 REMARK 620 5 HOH A 409 O 170.9 87.3 80.6 86.4 REMARK 620 6 HOH A 423 O 91.5 95.2 157.8 87.3 80.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GY6 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5W3I RELATED DB: PDB DBREF 5W44 A 1 178 UNP C3W5S0 C3W5S0_I09A0 1 197 SEQADV 5W44 A UNP C3W5S0 PHE 51 DELETION SEQADV 5W44 A UNP C3W5S0 HIS 52 DELETION SEQADV 5W44 A UNP C3W5S0 PHE 53 DELETION SEQADV 5W44 A UNP C3W5S0 ILE 54 DELETION SEQADV 5W44 A UNP C3W5S0 ASP 55 DELETION SEQADV 5W44 A UNP C3W5S0 GLU 56 DELETION SEQADV 5W44 A UNP C3W5S0 ARG 57 DELETION SEQADV 5W44 A UNP C3W5S0 GLY 58 DELETION SEQADV 5W44 A UNP C3W5S0 GLU 59 DELETION SEQADV 5W44 A UNP C3W5S0 SER 60 DELETION SEQADV 5W44 A UNP C3W5S0 ILE 61 DELETION SEQADV 5W44 A UNP C3W5S0 ILE 62 DELETION SEQADV 5W44 A UNP C3W5S0 VAL 63 DELETION SEQADV 5W44 A UNP C3W5S0 GLU 64 DELETION SEQADV 5W44 A UNP C3W5S0 SER 65 DELETION SEQADV 5W44 A UNP C3W5S0 GLY 66 DELETION SEQADV 5W44 A UNP C3W5S0 ASP 67 DELETION SEQADV 5W44 A UNP C3W5S0 PRO 68 DELETION SEQADV 5W44 A UNP C3W5S0 ASN 69 DELETION SEQADV 5W44 GLY A 51 UNP C3W5S0 ALA 70 LINKER SEQADV 5W44 GLY A 52 UNP C3W5S0 LEU 71 LINKER SEQADV 5W44 SER A 53 UNP C3W5S0 LEU 72 LINKER SEQADV 5W44 ALA A 178 UNP C3W5S0 GLY 197 EXPRESSION TAG SEQRES 1 A 178 MET GLU ASP PHE VAL ARG GLN CYS PHE ASN PRO MET ILE SEQRES 2 A 178 VAL GLU LEU ALA GLU LYS ALA MET LYS GLU TYR GLY GLU SEQRES 3 A 178 ASP PRO LYS ILE GLU THR ASN LYS PHE ALA ALA ILE CYS SEQRES 4 A 178 THR HIS LEU GLU VAL CYS PHE MET TYR SER ASP GLY GLY SEQRES 5 A 178 SER LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG SEQRES 6 A 178 ILE MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR SEQRES 7 A 178 THR GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR SEQRES 8 A 178 ASP TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR SEQRES 9 A 178 ARG ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN SEQRES 10 A 178 LYS ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER SEQRES 11 A 178 PHE THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR SEQRES 12 A 178 LEU ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU SEQRES 13 A 178 PHE THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP SEQRES 14 A 178 ASP SER PHE ARG GLN SER GLU ARG ALA HET MN A 301 1 HET GY6 A 302 56 HET MG A 303 1 HET NA A 304 1 HETNAM MN MANGANESE (II) ION HETNAM GY6 2-[(2S)-1-(2,6-DICHLOROBENZENE-1-CARBONYL)PYRROLIDIN-2- HETNAM 2 GY6 YL]-5-HYDROXY-6-OXO-N-(2-PHENYLETHYL)-1,6- HETNAM 3 GY6 DIHYDROPYRIMIDINE-4-CARBOXAMIDE HETNAM MG MAGNESIUM ION HETNAM NA SODIUM ION FORMUL 2 MN MN 2+ FORMUL 3 GY6 C24 H22 CL2 N4 O4 FORMUL 4 MG MG 2+ FORMUL 5 NA NA 1+ FORMUL 6 HOH *58(H2 O) HELIX 1 AA1 MET A 1 PHE A 9 1 9 HELIX 2 AA2 ASN A 10 GLU A 23 1 14 HELIX 3 AA3 GLU A 31 ASP A 50 1 20 HELIX 4 AA4 ASP A 64 GLY A 80 1 17 HELIX 5 AA5 GLU A 107 LYS A 120 1 14 HELIX 6 AA6 LYS A 139 ASP A 141 5 3 HELIX 7 AA7 ASP A 145 ARG A 166 1 22 HELIX 8 AA8 LEU A 168 GLN A 174 1 7 SHEET 1 AA1 5 PHE A 57 ILE A 59 0 SHEET 2 AA1 5 LEU A 90 ASP A 92 -1 O TYR A 91 N GLU A 58 SHEET 3 AA1 5 ARG A 97 THR A 104 -1 O ARG A 97 N ASP A 92 SHEET 4 AA1 5 HIS A 125 SER A 130 1 O HIS A 125 N GLU A 100 SHEET 5 AA1 5 GLU A 135 ALA A 137 -1 O MET A 136 N ILE A 128 LINK NE2 HIS A 41 MN MN A 301 1555 1555 2.22 LINK OE1 GLU A 61 MG MG A 303 1555 1555 2.08 LINK OD2 ASP A 89 MN MN A 301 1555 1555 2.16 LINK OD1 ASP A 89 MG MG A 303 1555 1555 1.99 LINK OE1 GLU A 100 MN MN A 301 1555 1555 2.25 LINK O ILE A 101 MN MN A 301 1555 1555 2.19 LINK MN MN A 301 O08 GY6 A 302 1555 1555 2.08 LINK MN MN A 301 O05 GY6 A 302 1555 1555 2.30 LINK O05 GY6 A 302 MG MG A 303 1555 1555 2.01 LINK O12 GY6 A 302 MG MG A 303 1555 1555 2.07 LINK MG MG A 303 O HOH A 409 1555 1555 2.12 LINK MG MG A 303 O HOH A 423 1555 1555 2.17 SITE 1 AC1 6 HIS A 41 ASP A 89 GLU A 100 ILE A 101 SITE 2 AC1 6 GY6 A 302 MG A 303 SITE 1 AC2 17 ALA A 20 TYR A 24 GLU A 26 LYS A 34 SITE 2 AC2 17 ILE A 38 HIS A 41 GLU A 61 ASP A 89 SITE 3 AC2 17 GLU A 100 ILE A 101 LYS A 115 MN A 301 SITE 4 AC2 17 MG A 303 HOH A 409 HOH A 418 HOH A 423 SITE 5 AC2 17 HOH A 427 SITE 1 AC3 6 GLU A 61 ASP A 89 MN A 301 GY6 A 302 SITE 2 AC3 6 HOH A 409 HOH A 423 CRYST1 74.111 74.111 127.845 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013493 0.007790 0.000000 0.00000 SCALE2 0.000000 0.015581 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007822 0.00000