HEADER PROTEIN BINDING 10-JUN-17 5W4F TITLE IMPORTIN BINDING TO POL MU NLS PEPTIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: IMPORTIN SUBUNIT ALPHA-1; COMPND 3 CHAIN: B; COMPND 4 SYNONYM: IMPORTIN ALPHA P1,KARYOPHERIN SUBUNIT ALPHA-2,PENDULIN,PORE COMPND 5 TARGETING COMPLEX 58 KDA SUBUNIT,PTAC58,RAG COHORT PROTEIN 1,SRP1- COMPND 6 ALPHA; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA-DIRECTED DNA/RNA POLYMERASE MU; COMPND 10 CHAIN: A, D; COMPND 11 SYNONYM: POL MU,TERMINAL TRANSFERASE; COMPND 12 EC: 2.7.7.7; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: NLS PEPTIDE OF DNA POLYMERASE MU SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KPNA2, RCH1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606 KEYWDS IMPORTIN, NLS, TDT, NUCLEAR TRANSPORT, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.C.PEDERSEN,R.E.LONDON REVDAT 3 04-OCT-23 5W4F 1 REMARK REVDAT 2 01-JAN-20 5W4F 1 JRNL REVDAT 1 13-JUN-18 5W4F 0 JRNL AUTH T.W.KIRBY,L.C.PEDERSEN,S.A.GABEL,N.R.GASSMAN,R.E.LONDON JRNL TITL VARIATIONS IN NUCLEAR LOCALIZATION STRATEGIES AMONG POL X JRNL TITL 2 FAMILY ENZYMES. JRNL REF TRAFFIC 2018 JRNL REFN ESSN 1600-0854 JRNL PMID 29931796 JRNL DOI 10.1111/TRA.12600 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 48351 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 2422 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.9448 - 5.0977 0.99 2967 157 0.1659 0.1747 REMARK 3 2 5.0977 - 4.0473 1.00 2842 148 0.1396 0.1543 REMARK 3 3 4.0473 - 3.5360 1.00 2800 148 0.1460 0.1593 REMARK 3 4 3.5360 - 3.2129 1.00 2807 145 0.1769 0.2180 REMARK 3 5 3.2129 - 2.9827 1.00 2772 148 0.1803 0.2148 REMARK 3 6 2.9827 - 2.8069 1.00 2773 146 0.1825 0.2088 REMARK 3 7 2.8069 - 2.6663 1.00 2774 143 0.1757 0.2232 REMARK 3 8 2.6663 - 2.5503 1.00 2749 147 0.1844 0.2198 REMARK 3 9 2.5503 - 2.4521 1.00 2778 149 0.1804 0.2384 REMARK 3 10 2.4521 - 2.3675 1.00 2741 145 0.1774 0.2327 REMARK 3 11 2.3675 - 2.2935 1.00 2767 150 0.1777 0.2217 REMARK 3 12 2.2935 - 2.2279 1.00 2733 139 0.1755 0.1984 REMARK 3 13 2.2279 - 2.1693 1.00 2749 145 0.1817 0.2151 REMARK 3 14 2.1693 - 2.1164 0.99 2690 141 0.1895 0.2457 REMARK 3 15 2.1164 - 2.0682 0.95 2617 140 0.2049 0.2927 REMARK 3 16 2.0682 - 2.0242 0.87 2362 130 0.2196 0.2541 REMARK 3 17 2.0242 - 1.9837 0.73 2008 101 0.2500 0.3227 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.140 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3414 REMARK 3 ANGLE : 1.081 4669 REMARK 3 CHIRALITY : 0.070 565 REMARK 3 PLANARITY : 0.005 602 REMARK 3 DIHEDRAL : 11.138 2074 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48426 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.01 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5E6Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES 0.8 M SODIUM CITRATE, PH REMARK 280 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.50250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.77050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.90950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 49.77050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.50250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.90950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17610 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 20 REMARK 465 HIS B 21 REMARK 465 HIS B 22 REMARK 465 HIS B 23 REMARK 465 HIS B 24 REMARK 465 HIS B 25 REMARK 465 HIS B 26 REMARK 465 SER B 27 REMARK 465 SER B 28 REMARK 465 GLY B 29 REMARK 465 LEU B 30 REMARK 465 VAL B 31 REMARK 465 PRO B 32 REMARK 465 ARG B 33 REMARK 465 GLY B 34 REMARK 465 SER B 35 REMARK 465 GLY B 36 REMARK 465 MET B 37 REMARK 465 LYS B 38 REMARK 465 GLU B 39 REMARK 465 THR B 40 REMARK 465 ALA B 41 REMARK 465 ALA B 42 REMARK 465 ALA B 43 REMARK 465 LYS B 44 REMARK 465 PHE B 45 REMARK 465 GLU B 46 REMARK 465 ARG B 47 REMARK 465 GLN B 48 REMARK 465 HIS B 49 REMARK 465 MET B 50 REMARK 465 ASP B 51 REMARK 465 SER B 52 REMARK 465 PRO B 53 REMARK 465 ASP B 54 REMARK 465 LEU B 55 REMARK 465 GLY B 56 REMARK 465 THR B 57 REMARK 465 ASP B 58 REMARK 465 ASP B 59 REMARK 465 ASP B 60 REMARK 465 ASP B 61 REMARK 465 LYS B 62 REMARK 465 ALA B 63 REMARK 465 MET B 64 REMARK 465 ALA B 65 REMARK 465 ASP B 66 REMARK 465 ILE B 67 REMARK 465 GLY B 68 REMARK 465 SER B 69 REMARK 465 ASN B 70 REMARK 465 GLN B 71 REMARK 465 SER B 497 REMARK 465 VAL B 498 REMARK 465 GLU B 499 REMARK 465 GLU B 500 REMARK 465 GLU B 501 REMARK 465 GLU B 502 REMARK 465 ASP B 503 REMARK 465 GLN B 504 REMARK 465 ASN B 505 REMARK 465 VAL B 506 REMARK 465 VAL B 507 REMARK 465 PRO B 508 REMARK 465 GLU B 509 REMARK 465 THR B 510 REMARK 465 THR B 511 REMARK 465 SER B 512 REMARK 465 GLU B 513 REMARK 465 GLY B 514 REMARK 465 PHE B 515 REMARK 465 ALA B 516 REMARK 465 PHE B 517 REMARK 465 GLN B 518 REMARK 465 VAL B 519 REMARK 465 GLN B 520 REMARK 465 ASP B 521 REMARK 465 GLY B 522 REMARK 465 ALA B 523 REMARK 465 PRO B 524 REMARK 465 GLY B 525 REMARK 465 THR B 526 REMARK 465 PHE B 527 REMARK 465 ASN B 528 REMARK 465 PHE B 529 REMARK 465 ARG A 9 REMARK 465 VAL A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 PRO A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 ASP A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 SER A 19 REMARK 465 SER A 20 REMARK 465 THR A 21 REMARK 465 PRO A 22 REMARK 465 PRO A 23 REMARK 465 SER A 24 REMARK 465 THR A 25 REMARK 465 ARG A 26 REMARK 465 PHE A 27 REMARK 465 PRO A 28 REMARK 465 GLY A 29 REMARK 465 VAL A 30 REMARK 465 LEU D 2 REMARK 465 ALA D 8 REMARK 465 ARG D 9 REMARK 465 VAL D 10 REMARK 465 GLY D 11 REMARK 465 SER D 12 REMARK 465 PRO D 13 REMARK 465 SER D 14 REMARK 465 GLY D 15 REMARK 465 ASP D 16 REMARK 465 ALA D 17 REMARK 465 ALA D 18 REMARK 465 SER D 19 REMARK 465 SER D 20 REMARK 465 THR D 21 REMARK 465 PRO D 22 REMARK 465 PRO D 23 REMARK 465 SER D 24 REMARK 465 THR D 25 REMARK 465 ARG D 26 REMARK 465 PHE D 27 REMARK 465 PRO D 28 REMARK 465 GLY D 29 REMARK 465 VAL D 30 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL B 74 CG1 CG2 REMARK 470 ASN B 75 CG OD1 ND2 REMARK 470 ASN B 88 CG OD1 ND2 REMARK 470 GLN B 95 CD OE1 NE2 REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 LYS B 108 CG CD CE NZ REMARK 470 GLN B 109 CG CD OE1 NE2 REMARK 470 LYS B 123 CE NZ REMARK 470 ASP B 132 CG OD1 OD2 REMARK 470 LYS B 291 CD CE NZ REMARK 470 LYS B 330 CE NZ REMARK 470 LYS B 392 CD CE NZ REMARK 470 LYS B 432 CG CD CE NZ REMARK 470 LYS B 435 CE NZ REMARK 470 GLU B 458 CG CD OE1 OE2 REMARK 470 LYS B 459 CG CD CE NZ REMARK 470 GLU B 465 CG CD OE1 OE2 REMARK 470 GLU B 474 CG CD OE1 OE2 REMARK 470 GLN B 477 CG CD OE1 NE2 REMARK 470 ARG B 478 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 480 CG CD OE1 OE2 REMARK 470 GLU B 482 CG CD OE1 OE2 REMARK 470 TYR B 485 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS B 486 CG CD CE NZ REMARK 470 LEU B 489 CG CD1 CD2 REMARK 470 GLU B 493 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP B 247 O HOH B 701 2.14 REMARK 500 O HOH B 846 O HOH B 992 2.15 REMARK 500 O HOH B 843 O HOH B 921 2.17 REMARK 500 O HOH B 815 O HOH B 922 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 770 O HOH B 947 4455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN B 239 156.89 82.07 REMARK 500 LYS B 432 47.55 -84.35 REMARK 500 ARG B 478 44.41 -96.67 REMARK 500 GLU B 480 49.99 -71.54 REMARK 500 GLU B 493 41.46 -79.19 REMARK 500 LYS B 494 -28.00 -160.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5W4E RELATED DB: PDB REMARK 900 RELATED ID: 5W4G RELATED DB: PDB DBREF 5W4F B 70 529 UNP P52293 IMA1_MOUSE 70 529 DBREF 5W4F A 2 30 UNP Q9NP87 DPOLM_HUMAN 2 30 DBREF 5W4F D 2 30 UNP Q9NP87 DPOLM_HUMAN 2 30 SEQADV 5W4F MET B 20 UNP P52293 INITIATING METHIONINE SEQADV 5W4F HIS B 21 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 22 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 23 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 24 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 25 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 26 UNP P52293 EXPRESSION TAG SEQADV 5W4F SER B 27 UNP P52293 EXPRESSION TAG SEQADV 5W4F SER B 28 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLY B 29 UNP P52293 EXPRESSION TAG SEQADV 5W4F LEU B 30 UNP P52293 EXPRESSION TAG SEQADV 5W4F VAL B 31 UNP P52293 EXPRESSION TAG SEQADV 5W4F PRO B 32 UNP P52293 EXPRESSION TAG SEQADV 5W4F ARG B 33 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLY B 34 UNP P52293 EXPRESSION TAG SEQADV 5W4F SER B 35 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLY B 36 UNP P52293 EXPRESSION TAG SEQADV 5W4F MET B 37 UNP P52293 EXPRESSION TAG SEQADV 5W4F LYS B 38 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLU B 39 UNP P52293 EXPRESSION TAG SEQADV 5W4F THR B 40 UNP P52293 EXPRESSION TAG SEQADV 5W4F ALA B 41 UNP P52293 EXPRESSION TAG SEQADV 5W4F ALA B 42 UNP P52293 EXPRESSION TAG SEQADV 5W4F ALA B 43 UNP P52293 EXPRESSION TAG SEQADV 5W4F LYS B 44 UNP P52293 EXPRESSION TAG SEQADV 5W4F PHE B 45 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLU B 46 UNP P52293 EXPRESSION TAG SEQADV 5W4F ARG B 47 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLN B 48 UNP P52293 EXPRESSION TAG SEQADV 5W4F HIS B 49 UNP P52293 EXPRESSION TAG SEQADV 5W4F MET B 50 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 51 UNP P52293 EXPRESSION TAG SEQADV 5W4F SER B 52 UNP P52293 EXPRESSION TAG SEQADV 5W4F PRO B 53 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 54 UNP P52293 EXPRESSION TAG SEQADV 5W4F LEU B 55 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLY B 56 UNP P52293 EXPRESSION TAG SEQADV 5W4F THR B 57 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 58 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 59 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 60 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 61 UNP P52293 EXPRESSION TAG SEQADV 5W4F LYS B 62 UNP P52293 EXPRESSION TAG SEQADV 5W4F ALA B 63 UNP P52293 EXPRESSION TAG SEQADV 5W4F MET B 64 UNP P52293 EXPRESSION TAG SEQADV 5W4F ALA B 65 UNP P52293 EXPRESSION TAG SEQADV 5W4F ASP B 66 UNP P52293 EXPRESSION TAG SEQADV 5W4F ILE B 67 UNP P52293 EXPRESSION TAG SEQADV 5W4F GLY B 68 UNP P52293 EXPRESSION TAG SEQADV 5W4F SER B 69 UNP P52293 EXPRESSION TAG SEQRES 1 B 510 MET HIS HIS HIS HIS HIS HIS SER SER GLY LEU VAL PRO SEQRES 2 B 510 ARG GLY SER GLY MET LYS GLU THR ALA ALA ALA LYS PHE SEQRES 3 B 510 GLU ARG GLN HIS MET ASP SER PRO ASP LEU GLY THR ASP SEQRES 4 B 510 ASP ASP ASP LYS ALA MET ALA ASP ILE GLY SER ASN GLN SEQRES 5 B 510 GLY THR VAL ASN TRP SER VAL GLU ASP ILE VAL LYS GLY SEQRES 6 B 510 ILE ASN SER ASN ASN LEU GLU SER GLN LEU GLN ALA THR SEQRES 7 B 510 GLN ALA ALA ARG LYS LEU LEU SER ARG GLU LYS GLN PRO SEQRES 8 B 510 PRO ILE ASP ASN ILE ILE ARG ALA GLY LEU ILE PRO LYS SEQRES 9 B 510 PHE VAL SER PHE LEU GLY LYS THR ASP CYS SER PRO ILE SEQRES 10 B 510 GLN PHE GLU SER ALA TRP ALA LEU THR ASN ILE ALA SER SEQRES 11 B 510 GLY THR SER GLU GLN THR LYS ALA VAL VAL ASP GLY GLY SEQRES 12 B 510 ALA ILE PRO ALA PHE ILE SER LEU LEU ALA SER PRO HIS SEQRES 13 B 510 ALA HIS ILE SER GLU GLN ALA VAL TRP ALA LEU GLY ASN SEQRES 14 B 510 ILE ALA GLY ASP GLY SER ALA PHE ARG ASP LEU VAL ILE SEQRES 15 B 510 LYS HIS GLY ALA ILE ASP PRO LEU LEU ALA LEU LEU ALA SEQRES 16 B 510 VAL PRO ASP LEU SER THR LEU ALA CYS GLY TYR LEU ARG SEQRES 17 B 510 ASN LEU THR TRP THR LEU SER ASN LEU CYS ARG ASN LYS SEQRES 18 B 510 ASN PRO ALA PRO PRO LEU ASP ALA VAL GLU GLN ILE LEU SEQRES 19 B 510 PRO THR LEU VAL ARG LEU LEU HIS HIS ASN ASP PRO GLU SEQRES 20 B 510 VAL LEU ALA ASP SER CYS TRP ALA ILE SER TYR LEU THR SEQRES 21 B 510 ASP GLY PRO ASN GLU ARG ILE GLU MET VAL VAL LYS LYS SEQRES 22 B 510 GLY VAL VAL PRO GLN LEU VAL LYS LEU LEU GLY ALA THR SEQRES 23 B 510 GLU LEU PRO ILE VAL THR PRO ALA LEU ARG ALA ILE GLY SEQRES 24 B 510 ASN ILE VAL THR GLY THR ASP GLU GLN THR GLN LYS VAL SEQRES 25 B 510 ILE ASP ALA GLY ALA LEU ALA VAL PHE PRO SER LEU LEU SEQRES 26 B 510 THR ASN PRO LYS THR ASN ILE GLN LYS GLU ALA THR TRP SEQRES 27 B 510 THR MET SER ASN ILE THR ALA GLY ARG GLN ASP GLN ILE SEQRES 28 B 510 GLN GLN VAL VAL ASN HIS GLY LEU VAL PRO PHE LEU VAL SEQRES 29 B 510 GLY VAL LEU SER LYS ALA ASP PHE LYS THR GLN LYS GLU SEQRES 30 B 510 ALA ALA TRP ALA ILE THR ASN TYR THR SER GLY GLY THR SEQRES 31 B 510 VAL GLU GLN ILE VAL TYR LEU VAL HIS CYS GLY ILE ILE SEQRES 32 B 510 GLU PRO LEU MET ASN LEU LEU SER ALA LYS ASP THR LYS SEQRES 33 B 510 ILE ILE GLN VAL ILE LEU ASP ALA ILE SER ASN ILE PHE SEQRES 34 B 510 GLN ALA ALA GLU LYS LEU GLY GLU THR GLU LYS LEU SER SEQRES 35 B 510 ILE MET ILE GLU GLU CYS GLY GLY LEU ASP LYS ILE GLU SEQRES 36 B 510 ALA LEU GLN ARG HIS GLU ASN GLU SER VAL TYR LYS ALA SEQRES 37 B 510 SER LEU ASN LEU ILE GLU LYS TYR PHE SER VAL GLU GLU SEQRES 38 B 510 GLU GLU ASP GLN ASN VAL VAL PRO GLU THR THR SER GLU SEQRES 39 B 510 GLY PHE ALA PHE GLN VAL GLN ASP GLY ALA PRO GLY THR SEQRES 40 B 510 PHE ASN PHE SEQRES 1 A 29 LEU PRO LYS ARG ARG ARG ALA ARG VAL GLY SER PRO SER SEQRES 2 A 29 GLY ASP ALA ALA SER SER THR PRO PRO SER THR ARG PHE SEQRES 3 A 29 PRO GLY VAL SEQRES 1 D 29 LEU PRO LYS ARG ARG ARG ALA ARG VAL GLY SER PRO SER SEQRES 2 D 29 GLY ASP ALA ALA SER SER THR PRO PRO SER THR ARG PHE SEQRES 3 D 29 PRO GLY VAL HET GOL B 601 6 HET GOL B 602 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *317(H2 O) HELIX 1 AA1 SER B 77 ASN B 86 1 10 HELIX 2 AA2 ASN B 89 SER B 105 1 17 HELIX 3 AA3 PRO B 111 ALA B 118 1 8 HELIX 4 AA4 LEU B 120 GLY B 129 1 10 HELIX 5 AA5 CYS B 133 SER B 149 1 17 HELIX 6 AA6 THR B 151 GLY B 161 1 11 HELIX 7 AA7 GLY B 162 LEU B 171 1 10 HELIX 8 AA8 HIS B 175 GLY B 191 1 17 HELIX 9 AA9 GLY B 193 HIS B 203 1 11 HELIX 10 AB1 ALA B 205 LEU B 212 1 8 HELIX 11 AB2 ASP B 217 LEU B 221 5 5 HELIX 12 AB3 ALA B 222 ARG B 238 1 17 HELIX 13 AB4 PRO B 245 LEU B 260 1 16 HELIX 14 AB5 ASP B 264 THR B 279 1 16 HELIX 15 AB6 PRO B 282 LYS B 291 1 10 HELIX 16 AB7 VAL B 294 GLY B 303 1 10 HELIX 17 AB8 GLU B 306 VAL B 321 1 16 HELIX 18 AB9 THR B 324 ALA B 334 1 11 HELIX 19 AC1 GLY B 335 ALA B 338 5 4 HELIX 20 AC2 VAL B 339 LEU B 344 1 6 HELIX 21 AC3 LYS B 348 THR B 363 1 16 HELIX 22 AC4 ARG B 366 HIS B 376 1 11 HELIX 23 AC5 GLY B 377 LYS B 388 1 12 HELIX 24 AC6 ASP B 390 GLY B 408 1 19 HELIX 25 AC7 THR B 409 CYS B 419 1 11 HELIX 26 AC8 ILE B 421 LEU B 428 1 8 HELIX 27 AC9 LEU B 429 ALA B 431 5 3 HELIX 28 AD1 ASP B 433 LYS B 453 1 21 HELIX 29 AD2 GLU B 456 CYS B 467 1 12 HELIX 30 AD3 GLY B 468 LEU B 476 1 9 HELIX 31 AD4 GLN B 477 HIS B 479 5 3 HELIX 32 AD5 ASN B 481 PHE B 496 1 16 CISPEP 1 ASN B 241 PRO B 242 0 -0.87 SITE 1 AC1 5 TRP B 76 ASP B 80 ALA B 214 VAL B 215 SITE 2 AC1 5 PRO B 216 SITE 1 AC2 5 GLN B 371 VAL B 374 GLU B 411 GLN B 412 SITE 2 AC2 5 HOH B 770 CRYST1 79.005 89.819 99.541 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012657 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011134 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010046 0.00000