HEADER DE NOVO PROTEIN 11-JUN-17 5W4H TITLE X-RAY CRYSTALLOGRAPHIC STRUCTURE OF A BETA-HAIRPIN PEPTIDE MIMIC TITLE 2 DERIVED FROM ABETA 16-36. SYNCHROTRON DATA SET. (ORN)KLV(MEA) TITLE 3 FAE(ORN)AIIGLMV. COMPND MOL_ID: 1; COMPND 2 MOLECULE: A-BETA 17_36 PEPTIDE: ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLU-ORN- COMPND 3 ALA-ILE-ILE-GLY-LEU-MET-VAL; COMPND 4 CHAIN: A, B, C; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS AMYLOID, OLIGOMER, ALZHEIMER'S, TRIMER, PROTEIN FIBRIL, DE NOVO KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.G.KREUTZER,R.K.SPENCER,J.S.NOWICK REVDAT 4 04-OCT-23 5W4H 1 LINK REVDAT 3 01-JAN-20 5W4H 1 REMARK REVDAT 2 29-NOV-17 5W4H 1 JRNL REVDAT 1 22-NOV-17 5W4H 0 JRNL AUTH A.G.KREUTZER,R.K.SPENCER,K.J.MCKNELLY,S.YOO,I.L.HAMZA, JRNL AUTH 2 P.J.SALVESON,J.S.NOWICK JRNL TITL A HEXAMER OF A PEPTIDE DERIVED FROM A BETA 16-36. JRNL REF BIOCHEMISTRY V. 56 6061 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 29028351 JRNL DOI 10.1021/ACS.BIOCHEM.7B00831 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1-2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 67.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 6025 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 603 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 67.5920 - 2.7267 0.99 1449 161 0.1889 0.2267 REMARK 3 2 2.7267 - 2.1642 1.00 1349 150 0.2290 0.2339 REMARK 3 3 2.1642 - 1.8906 1.00 1327 148 0.2018 0.2518 REMARK 3 4 1.8906 - 1.7177 0.99 1297 144 0.2691 0.3375 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 381 REMARK 3 ANGLE : 1.826 501 REMARK 3 CHIRALITY : 0.085 63 REMARK 3 PLANARITY : 0.011 57 REMARK 3 DIHEDRAL : 29.113 243 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.3625 20.0828 40.3202 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.2511 REMARK 3 T33: 0.2347 T12: 0.0438 REMARK 3 T13: 0.0274 T23: 0.0253 REMARK 3 L TENSOR REMARK 3 L11: 3.4498 L22: 8.2453 REMARK 3 L33: 4.7569 L12: 4.4487 REMARK 3 L13: -2.7599 L23: -1.7101 REMARK 3 S TENSOR REMARK 3 S11: 0.1773 S12: -0.3335 S13: 0.4905 REMARK 3 S21: 0.1612 S22: -0.0675 S23: 0.2319 REMARK 3 S31: 0.0009 S32: -0.1774 S33: 0.0272 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1622 12.8603 33.2819 REMARK 3 T TENSOR REMARK 3 T11: 0.2952 T22: 0.4085 REMARK 3 T33: 0.4268 T12: -0.0051 REMARK 3 T13: -0.0341 T23: 0.0602 REMARK 3 L TENSOR REMARK 3 L11: 4.0673 L22: 4.1146 REMARK 3 L33: 5.2124 L12: -2.7550 REMARK 3 L13: 0.9721 L23: -0.4404 REMARK 3 S TENSOR REMARK 3 S11: -0.3076 S12: -0.1255 S13: -0.5005 REMARK 3 S21: 0.2698 S22: 0.4352 S23: 0.5059 REMARK 3 S31: 0.8075 S32: -0.0900 S33: -0.0180 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3209 20.8829 27.8870 REMARK 3 T TENSOR REMARK 3 T11: 0.3638 T22: 0.2999 REMARK 3 T33: 0.2651 T12: 0.0615 REMARK 3 T13: 0.0335 T23: 0.0251 REMARK 3 L TENSOR REMARK 3 L11: 5.6314 L22: 4.6597 REMARK 3 L33: 4.5685 L12: 2.1670 REMARK 3 L13: 2.0800 L23: 4.0269 REMARK 3 S TENSOR REMARK 3 S11: 0.2886 S12: 0.1919 S13: 0.0831 REMARK 3 S21: -0.3588 S22: -0.2649 S23: 0.0018 REMARK 3 S31: -0.7332 S32: -0.2711 S33: -0.1432 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W4H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228393. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-MAY-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.998 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.718 REMARK 200 RESOLUTION RANGE LOW (A) : 67.540 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.00927 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.7900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.22660 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5W4I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES BUFFER (PH 7.0), 0.25 M REMARK 280 MAGNESIUM CHLORIDE, 34% ISOPROPANOL, PH 7.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 296.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 4 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 Y,X,-Z REMARK 290 14555 -Y,-X,-Z REMARK 290 15555 Y,-X,Z REMARK 290 16555 -Y,X,Z REMARK 290 17555 X,Z,-Y REMARK 290 18555 -X,Z,Y REMARK 290 19555 -X,-Z,-Y REMARK 290 20555 X,-Z,Y REMARK 290 21555 Z,Y,-X REMARK 290 22555 Z,-Y,X REMARK 290 23555 -Z,Y,X REMARK 290 24555 -Z,-Y,-X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 14 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 15 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 17 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 19 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 19 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 20 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 21 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 21 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 22 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 22 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 23 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 24 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 24 -1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5010 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 5360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 67.54000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: 72-MERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 84180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -539.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT1 5 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 5 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 6 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT3 6 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT2 7 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT3 7 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 8 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT2 8 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 8 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT1 9 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 9 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 9 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT1 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT3 11 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT1 12 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT2 12 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT3 12 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 13 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT1 14 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT2 14 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT3 14 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT1 15 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 15 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT3 15 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 16 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT2 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 17 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 17 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT1 18 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT2 18 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 18 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT2 19 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT3 19 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT1 20 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 20 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT3 20 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 -1.000000 0.000000 0.000000 67.54000 REMARK 350 BIOMT1 22 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT3 22 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 23 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT2 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 23 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 24 0.000000 0.000000 -1.000000 67.54000 REMARK 350 BIOMT2 24 0.000000 -1.000000 0.000000 67.54000 REMARK 350 BIOMT3 24 -1.000000 0.000000 0.000000 67.54000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 110 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 108 LIES ON A SPECIAL POSITION. REMARK 375 HOH C 112 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H1 ORN B 1 O HOH B 103 1.53 REMARK 500 O HOH C 103 O HOH C 104 1.85 REMARK 500 O ORN B 9 O HOH B 101 2.09 REMARK 500 O HOH A 103 O HOH A 106 2.11 REMARK 500 O HOH A 106 O HOH A 109 2.14 REMARK 500 O HOH C 104 O HOH C 110 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 103 O HOH A 103 3556 1.64 REMARK 500 O HOH C 105 O HOH C 108 5555 2.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 5W4H A 1 16 PDB 5W4H 5W4H 1 16 DBREF 5W4H B 1 16 PDB 5W4H 5W4H 1 16 DBREF 5W4H C 1 16 PDB 5W4H 5W4H 1 16 SEQRES 1 A 16 ORN LYS LEU VAL MEA PHE ALA GLU ORN ALA ILE ILE GLY SEQRES 2 A 16 LEU MET VAL SEQRES 1 B 16 ORN LYS LEU VAL MEA PHE ALA GLU ORN ALA ILE ILE GLY SEQRES 2 B 16 LEU MET VAL SEQRES 1 C 16 ORN LYS LEU VAL MEA PHE ALA GLU ORN ALA ILE ILE GLY SEQRES 2 C 16 LEU MET VAL HET ORN A 1 19 HET MEA A 5 23 HET ORN A 9 19 HET ORN B 1 19 HET MEA B 5 23 HET ORN B 9 19 HET ORN C 1 19 HET MEA C 5 23 HET ORN C 9 19 HETNAM ORN L-ORNITHINE HETNAM MEA N-METHYLPHENYLALANINE FORMUL 1 ORN 6(C5 H12 N2 O2) FORMUL 1 MEA 3(C10 H13 N O2) FORMUL 4 HOH *33(H2 O) SHEET 1 AA1 5 ILE B 11 VAL B 16 0 SHEET 2 AA1 5 LYS B 2 ALA B 7 -1 N VAL B 4 O LEU B 14 SHEET 3 AA1 5 LYS C 2 ALA C 7 -1 O MEA C 5 N LEU B 3 SHEET 4 AA1 5 ILE C 11 VAL C 16 -1 O LEU C 14 N VAL C 4 SHEET 5 AA1 5 ILE A 11 VAL A 16 0 SHEET 1 AA2 4 ILE B 11 VAL B 16 0 SHEET 2 AA2 4 LYS B 2 ALA B 7 -1 N VAL B 4 O LEU B 14 SHEET 3 AA2 4 LYS A 2 ALA A 7 -1 N LEU A 3 O MEA B 5 SHEET 4 AA2 4 ILE A 11 VAL A 16 -1 O VAL A 16 N LYS A 2 LINK C ORN A 1 N LYS A 2 1555 1555 1.37 LINK NE ORN A 1 C VAL A 16 1555 1555 1.38 LINK C VAL A 4 N MEA A 5 1555 1555 1.33 LINK C MEA A 5 N PHE A 6 1555 1555 1.34 LINK C GLU A 8 NE ORN A 9 1555 1555 1.37 LINK C ORN A 9 N ALA A 10 1555 1555 1.37 LINK C ORN B 1 N LYS B 2 1555 1555 1.37 LINK NE ORN B 1 C VAL B 16 1555 1555 1.37 LINK C VAL B 4 N MEA B 5 1555 1555 1.34 LINK C MEA B 5 N PHE B 6 1555 1555 1.33 LINK C GLU B 8 NE ORN B 9 1555 1555 1.38 LINK C ORN B 9 N ALA B 10 1555 1555 1.37 LINK C ORN C 1 N LYS C 2 1555 1555 1.38 LINK NE ORN C 1 C VAL C 16 1555 1555 1.38 LINK C VAL C 4 N MEA C 5 1555 1555 1.34 LINK C MEA C 5 N PHE C 6 1555 1555 1.34 LINK C GLU C 8 NE ORN C 9 1555 1555 1.38 LINK C ORN C 9 N ALA C 10 1555 1555 1.37 CRYST1 67.540 67.540 67.540 90.00 90.00 90.00 P 4 3 2 72 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014806 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014806 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014806 0.00000 HETATM 1 N ORN A 1 1.918 13.001 42.667 1.00 42.06 N ANISOU 1 N ORN A 1 4960 6219 4803 -762 735 330 N HETATM 2 CA ORN A 1 2.213 14.432 42.583 1.00 39.64 C ANISOU 2 CA ORN A 1 4416 5820 4826 -508 742 341 C HETATM 3 CB ORN A 1 3.103 14.844 43.755 1.00 33.52 C ANISOU 3 CB ORN A 1 3880 4922 3933 -418 944 129 C HETATM 4 CG ORN A 1 2.359 14.964 45.094 1.00 37.57 C ANISOU 4 CG ORN A 1 4367 5400 4508 -522 1315 -83 C HETATM 5 CD ORN A 1 1.564 16.274 45.252 1.00 42.86 C ANISOU 5 CD ORN A 1 4633 5960 5692 -382 1578 -130 C HETATM 6 NE ORN A 1 2.434 17.396 45.116 1.00 40.36 N ANISOU 6 NE ORN A 1 4349 5511 5477 -193 1556 -148 N HETATM 7 C ORN A 1 2.966 14.784 41.289 1.00 32.80 C ANISOU 7 C ORN A 1 3589 4925 3947 -412 448 520 C HETATM 8 O ORN A 1 3.614 13.961 40.656 1.00 33.74 O ANISOU 8 O ORN A 1 4010 5045 3763 -512 309 576 O HETATM 9 H1 ORN A 1 1.229 12.771 43.388 1.00 50.47 H HETATM 10 H2 ORN A 1 1.540 12.614 41.799 1.00 50.47 H HETATM 11 H3 ORN A 1 2.739 12.430 42.883 1.00 50.47 H HETATM 12 HA ORN A 1 1.248 14.948 42.569 1.00 47.57 H HETATM 13 HB2 ORN A 1 3.548 15.824 43.536 1.00 40.22 H HETATM 14 HB3 ORN A 1 3.891 14.087 43.873 1.00 40.22 H HETATM 15 HG2 ORN A 1 1.668 14.118 45.186 1.00 45.09 H HETATM 16 HG3 ORN A 1 3.092 14.906 45.906 1.00 45.09 H HETATM 17 HD2 ORN A 1 0.792 16.320 44.478 1.00 51.43 H HETATM 18 HD3 ORN A 1 1.118 16.297 46.251 1.00 51.43 H HETATM 19 HE1 ORN A 1 2.952 17.654 45.954 1.00 48.44 H