HEADER METAL BINDING PROTEIN 14-JUN-17 5W57 TITLE STRUCTURE OF HOLO AZTC COMPND MOL_ID: 1; COMPND 2 MOLECULE: PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARACOCCUS DENITRIFICANS (STRAIN PD 1222); SOURCE 3 ORGANISM_TAXID: 318586; SOURCE 4 STRAIN: PD 1222; SOURCE 5 GENE: PDEN_1597; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: BL21(DE3) KEYWDS SOLUTE BINDING PROTEIN, ZINC, ABC TRANSPORTER, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.AVALOS,E.T.YUKL REVDAT 4 04-OCT-23 5W57 1 REMARK REVDAT 3 01-JAN-20 5W57 1 REMARK REVDAT 2 01-NOV-17 5W57 1 JRNL REVDAT 1 20-SEP-17 5W57 0 SPRSDE 20-SEP-17 5W57 4XRV JRNL AUTH D.P.NEUPANE,D.AVALOS,S.FULLAM,H.ROYCHOWDHURY,E.T.YUKL JRNL TITL MECHANISMS OF ZINC BINDING TO THE SOLUTE-BINDING PROTEIN JRNL TITL 2 AZTC AND TRANSFER FROM THE METALLOCHAPERONE AZTD. JRNL REF J. BIOL. CHEM. V. 292 17496 2017 JRNL REFN ESSN 1083-351X JRNL PMID 28887302 JRNL DOI 10.1074/JBC.M117.804799 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 34875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.9343 - 5.2637 0.99 2837 150 0.1737 0.1718 REMARK 3 2 5.2637 - 4.1787 0.99 2789 147 0.1681 0.1962 REMARK 3 3 4.1787 - 3.6506 0.99 2748 145 0.1900 0.2026 REMARK 3 4 3.6506 - 3.3169 0.99 2759 145 0.2241 0.2691 REMARK 3 5 3.3169 - 3.0792 0.99 2738 143 0.2570 0.2867 REMARK 3 6 3.0792 - 2.8977 0.99 2728 144 0.2636 0.2984 REMARK 3 7 2.8977 - 2.7526 1.00 2781 145 0.2958 0.3403 REMARK 3 8 2.7526 - 2.6328 1.00 2757 144 0.2854 0.3222 REMARK 3 9 2.6328 - 2.5314 1.00 2769 146 0.2977 0.3393 REMARK 3 10 2.5314 - 2.4441 1.00 2712 143 0.3071 0.3549 REMARK 3 11 2.4441 - 2.3677 0.99 2739 145 0.3155 0.3899 REMARK 3 12 2.3677 - 2.3000 1.00 2775 146 0.3266 0.3936 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4276 REMARK 3 ANGLE : 0.888 5841 REMARK 3 CHIRALITY : 0.048 664 REMARK 3 PLANARITY : 0.006 789 REMARK 3 DIHEDRAL : 5.781 2940 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESSEQ 25:308) REMARK 3 ORIGIN FOR THE GROUP (A): 23.2667 -0.2748 8.0060 REMARK 3 T TENSOR REMARK 3 T11: 0.3042 T22: 0.5046 REMARK 3 T33: 0.4090 T12: -0.0447 REMARK 3 T13: -0.0038 T23: -0.1157 REMARK 3 L TENSOR REMARK 3 L11: 2.3637 L22: 1.7371 REMARK 3 L33: 2.8427 L12: -0.3553 REMARK 3 L13: 0.6043 L23: 0.3548 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: 0.0039 S13: 0.1927 REMARK 3 S21: 0.0807 S22: -0.2877 S23: 0.2465 REMARK 3 S31: -0.1327 S32: -0.0604 S33: 0.2782 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN B AND RESSEQ 25:308) REMARK 3 ORIGIN FOR THE GROUP (A): 17.4153 10.6024 43.9866 REMARK 3 T TENSOR REMARK 3 T11: 0.4194 T22: 0.5196 REMARK 3 T33: 0.5250 T12: 0.1638 REMARK 3 T13: -0.0370 T23: -0.1509 REMARK 3 L TENSOR REMARK 3 L11: 2.9257 L22: 3.0050 REMARK 3 L33: 2.8296 L12: 1.7277 REMARK 3 L13: -0.4869 L23: 1.1571 REMARK 3 S TENSOR REMARK 3 S11: -0.0515 S12: -0.3267 S13: 0.1889 REMARK 3 S21: -0.3848 S22: -0.5142 S23: 0.7584 REMARK 3 S31: -0.1470 S32: -0.1319 S33: 0.5566 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W57 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228462. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34922 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 48.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.06200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.45000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4XRV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM FORMATE 4.0-4.5 M, BIS-TRIS REMARK 280 PROPANE 0.1 M, PH 7.0, BATCH MODE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.42000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.18650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.42000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.18650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2400 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -8.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 24 REMARK 465 ARG A 309 REMARK 465 ALA B 24 REMARK 465 ARG B 309 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 131 CG ND1 CD2 CE1 NE2 REMARK 470 ALA A 134 CB REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 82 OG1 THR A 107 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 64 OE1 - CD - OE2 ANGL. DEV. = 8.1 DEGREES REMARK 500 ILE A 292 CG1 - CB - CG2 ANGL. DEV. = -14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 121 141.99 47.01 REMARK 500 HIS A 122 -81.40 -121.63 REMARK 500 TYR A 123 113.27 88.62 REMARK 500 ASP A 125 -104.22 -102.89 REMARK 500 HIS A 131 -142.51 -72.29 REMARK 500 HIS A 135 118.02 57.38 REMARK 500 ASP A 161 72.68 -156.00 REMARK 500 ALA A 192 6.20 -69.66 REMARK 500 SER A 278 -70.32 -100.61 REMARK 500 ASP A 285 -15.09 72.32 REMARK 500 ALA A 288 58.29 -140.61 REMARK 500 GLU B 111 94.84 -66.52 REMARK 500 GLU B 111 94.99 -69.31 REMARK 500 ALA B 128 94.69 58.82 REMARK 500 HIS B 131 -79.99 -45.92 REMARK 500 ALA B 132 -39.37 94.33 REMARK 500 ALA B 132 -39.37 92.39 REMARK 500 ALA B 134 137.01 64.11 REMARK 500 HIS B 138 51.32 -66.83 REMARK 500 SER B 278 -79.54 -97.05 REMARK 500 ASP B 285 -9.52 74.29 REMARK 500 ALA B 288 56.49 -141.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 NE2 REMARK 620 2 HIS A 138 NE2 107.9 REMARK 620 3 HIS A 204 NE2 116.3 121.4 REMARK 620 4 ASP A 279 OD1 91.8 123.5 92.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 61 NE2 REMARK 620 2 HIS B 138 NE2 103.4 REMARK 620 3 HIS B 204 NE2 115.4 115.5 REMARK 620 4 ASP B 279 OD1 95.2 130.9 95.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5W56 RELATED DB: PDB DBREF 5W57 A 24 309 UNP A1B2F3 A1B2F3_PARDP 24 309 DBREF 5W57 B 24 309 UNP A1B2F3 A1B2F3_PARDP 24 309 SEQRES 1 A 286 ALA GLU PRO LEU ASP VAL VAL ALA THR PHE SER ILE ILE SEQRES 2 A 286 GLY ASP PHE ALA ALA LYS VAL GLY GLY ASP ARG ILE ARG SEQRES 3 A 286 LEU ASN VAL LEU VAL GLY PRO ASP SER ASP THR HIS VAL SEQRES 4 A 286 TYR GLU PRO ARG PRO ALA ASP ALA ILE ALA LEU ALA GLY SEQRES 5 A 286 ALA ASP VAL VAL LEU THR ASN GLY LEU GLU PHE GLU GLY SEQRES 6 A 286 PHE LEU THR ARG LEU ILE ALA ALA SER GLY THR ASP ALA SEQRES 7 A 286 ALA VAL ALA THR LEU THR ASP GLY VAL GLU THR MET GLU SEQRES 8 A 286 GLU PRO GLY GLY GLY HIS TYR HIS TYR ILE ASP GLY LYS SEQRES 9 A 286 ALA VAL PHE HIS ALA GLY ALA HIS ASP PRO HIS ALA TRP SEQRES 10 A 286 GLN ALA VAL PRO ASN ALA LYS VAL TYR VAL GLN ASN ILE SEQRES 11 A 286 ALA ALA ALA PHE CYS ALA ALA ASP ALA GLU GLY CYS ALA SEQRES 12 A 286 ALA TYR GLN ALA ASN ALA ALA ARG TYR ILE GLY GLU LEU SEQRES 13 A 286 ASP ALA LEU ASP THR GLU ILE ARG ALA ALA ILE ALA ALA SEQRES 14 A 286 LEU PRO GLN ASP ARG ARG THR VAL VAL VAL ALA HIS ASN SEQRES 15 A 286 ALA PHE ARG TYR PHE GLU ALA ALA TYR GLY VAL HIS PHE SEQRES 16 A 286 LEU SER PRO GLN GLY VAL SER THR GLU SER GLU ALA ALA SEQRES 17 A 286 ALA ALA ASP VAL ALA GLY LEU ILE ARG GLU ILE ARG ALA SEQRES 18 A 286 ARG ASN ALA SER ALA ILE PHE ALA GLU ASN ILE SER ASP SEQRES 19 A 286 THR ARG LEU LEU GLU GLN ILE ALA ARG GLU ALA GLY LEU SEQRES 20 A 286 PRO LEU ALA GLY THR LEU TYR SER ASP ALA LEU SER GLY SEQRES 21 A 286 PRO ASP GLY PRO ALA SER ASN TYR ILE ALA MET MET ARG SEQRES 22 A 286 HIS ASN ALA GLY ALA ILE ALA ALA ALA LEU ALA ALA ARG SEQRES 1 B 286 ALA GLU PRO LEU ASP VAL VAL ALA THR PHE SER ILE ILE SEQRES 2 B 286 GLY ASP PHE ALA ALA LYS VAL GLY GLY ASP ARG ILE ARG SEQRES 3 B 286 LEU ASN VAL LEU VAL GLY PRO ASP SER ASP THR HIS VAL SEQRES 4 B 286 TYR GLU PRO ARG PRO ALA ASP ALA ILE ALA LEU ALA GLY SEQRES 5 B 286 ALA ASP VAL VAL LEU THR ASN GLY LEU GLU PHE GLU GLY SEQRES 6 B 286 PHE LEU THR ARG LEU ILE ALA ALA SER GLY THR ASP ALA SEQRES 7 B 286 ALA VAL ALA THR LEU THR ASP GLY VAL GLU THR MET GLU SEQRES 8 B 286 GLU PRO GLY GLY GLY HIS TYR HIS TYR ILE ASP GLY LYS SEQRES 9 B 286 ALA VAL PHE HIS ALA GLY ALA HIS ASP PRO HIS ALA TRP SEQRES 10 B 286 GLN ALA VAL PRO ASN ALA LYS VAL TYR VAL GLN ASN ILE SEQRES 11 B 286 ALA ALA ALA PHE CYS ALA ALA ASP ALA GLU GLY CYS ALA SEQRES 12 B 286 ALA TYR GLN ALA ASN ALA ALA ARG TYR ILE GLY GLU LEU SEQRES 13 B 286 ASP ALA LEU ASP THR GLU ILE ARG ALA ALA ILE ALA ALA SEQRES 14 B 286 LEU PRO GLN ASP ARG ARG THR VAL VAL VAL ALA HIS ASN SEQRES 15 B 286 ALA PHE ARG TYR PHE GLU ALA ALA TYR GLY VAL HIS PHE SEQRES 16 B 286 LEU SER PRO GLN GLY VAL SER THR GLU SER GLU ALA ALA SEQRES 17 B 286 ALA ALA ASP VAL ALA GLY LEU ILE ARG GLU ILE ARG ALA SEQRES 18 B 286 ARG ASN ALA SER ALA ILE PHE ALA GLU ASN ILE SER ASP SEQRES 19 B 286 THR ARG LEU LEU GLU GLN ILE ALA ARG GLU ALA GLY LEU SEQRES 20 B 286 PRO LEU ALA GLY THR LEU TYR SER ASP ALA LEU SER GLY SEQRES 21 B 286 PRO ASP GLY PRO ALA SER ASN TYR ILE ALA MET MET ARG SEQRES 22 B 286 HIS ASN ALA GLY ALA ILE ALA ALA ALA LEU ALA ALA ARG HET ZN A 401 1 HET ZN B 401 1 HETNAM ZN ZINC ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 HOH *51(H2 O) HELIX 1 AA1 SER A 34 GLY A 45 1 12 HELIX 2 AA2 ARG A 66 GLY A 75 1 10 HELIX 3 AA3 PHE A 89 GLY A 98 1 10 HELIX 4 AA4 HIS A 138 GLN A 141 5 4 HELIX 5 AA5 ALA A 142 ASP A 161 1 20 HELIX 6 AA6 GLY A 164 ALA A 192 1 29 HELIX 7 AA7 PHE A 207 GLY A 215 1 9 HELIX 8 AA8 ALA A 231 ALA A 233 5 3 HELIX 9 AA9 ASP A 234 ARG A 245 1 12 HELIX 10 AB1 THR A 258 GLY A 269 1 12 HELIX 11 AB2 ASN A 290 ALA A 308 1 19 HELIX 12 AB3 SER B 34 GLY B 45 1 12 HELIX 13 AB4 ASP B 59 TYR B 63 5 5 HELIX 14 AB5 ARG B 66 ALA B 76 1 11 HELIX 15 AB6 PHE B 89 GLY B 98 1 10 HELIX 16 AB7 HIS B 138 GLN B 141 5 4 HELIX 17 AB8 ALA B 142 ASP B 161 1 20 HELIX 18 AB9 GLY B 164 ALA B 192 1 29 HELIX 19 AC1 PHE B 207 GLY B 215 1 9 HELIX 20 AC2 ALA B 231 ARG B 245 1 15 HELIX 21 AC3 THR B 258 GLY B 269 1 12 HELIX 22 AC4 ASN B 290 ALA B 308 1 19 SHEET 1 AA1 4 ILE A 48 VAL A 54 0 SHEET 2 AA1 4 LEU A 27 PHE A 33 1 N LEU A 27 O ARG A 49 SHEET 3 AA1 4 VAL A 78 THR A 81 1 O LEU A 80 N VAL A 30 SHEET 4 AA1 4 ALA A 102 THR A 105 1 O ALA A 104 N VAL A 79 SHEET 1 AA2 2 THR A 199 VAL A 201 0 SHEET 2 AA2 2 HIS A 217 LEU A 219 1 O LEU A 219 N VAL A 200 SHEET 1 AA3 2 ILE A 250 GLU A 253 0 SHEET 2 AA3 2 LEU A 272 LEU A 276 1 O LEU A 276 N ALA A 252 SHEET 1 AA4 4 ILE B 48 VAL B 54 0 SHEET 2 AA4 4 LEU B 27 PHE B 33 1 N LEU B 27 O ARG B 49 SHEET 3 AA4 4 VAL B 78 THR B 81 1 O LEU B 80 N VAL B 30 SHEET 4 AA4 4 ALA B 102 THR B 105 1 O ALA B 104 N THR B 81 SHEET 1 AA5 4 HIS B 217 LEU B 219 0 SHEET 2 AA5 4 THR B 199 VAL B 201 1 N VAL B 200 O HIS B 217 SHEET 3 AA5 4 ALA B 249 GLU B 253 1 O PHE B 251 N VAL B 201 SHEET 4 AA5 4 LEU B 272 LEU B 276 1 O LEU B 276 N ALA B 252 SSBOND 1 CYS A 158 CYS A 165 1555 1555 2.05 SSBOND 2 CYS B 158 CYS B 165 1555 1555 2.12 LINK NE2 HIS A 61 ZN ZN A 401 1555 1555 2.07 LINK NE2 HIS A 138 ZN ZN A 401 1555 1555 2.23 LINK NE2 HIS A 204 ZN ZN A 401 1555 1555 2.32 LINK OD1 ASP A 279 ZN ZN A 401 1555 1555 2.00 LINK NE2 HIS B 61 ZN ZN B 401 1555 1555 1.99 LINK NE2 HIS B 138 ZN ZN B 401 1555 1555 2.32 LINK NE2 HIS B 204 ZN ZN B 401 1555 1555 2.33 LINK OD1 ASP B 279 ZN ZN B 401 1555 1555 1.98 CISPEP 1 GLY A 117 GLY A 118 0 -0.55 CISPEP 2 GLY A 118 GLY A 119 0 -4.54 CISPEP 3 GLY A 119 HIS A 120 0 9.36 CISPEP 4 ALA A 132 GLY A 133 0 -20.01 CISPEP 5 GLY A 133 ALA A 134 0 -19.90 SITE 1 AC1 5 HIS A 61 HIS A 138 HIS A 204 VAL A 224 SITE 2 AC1 5 ASP A 279 SITE 1 AC2 5 HIS B 61 HIS B 138 HIS B 204 VAL B 224 SITE 2 AC2 5 ASP B 279 CRYST1 104.840 72.373 105.613 90.00 96.55 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009538 0.000000 0.001095 0.00000 SCALE2 0.000000 0.013817 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009531 0.00000