HEADER APOPTOSIS/IMMUNE SYSTEM 16-JUN-17 5W5X TITLE CRYSTAL STRUCTURE OF BAXP168G IN COMPLEX WITH AN ACTIVATING ANTIBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C10 FAB' LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: 3C10 FAB' HEAVY CHAIN; COMPND 6 CHAIN: H; COMPND 7 OTHER_DETAILS: N-TERMINUS GLUTAMATE IS CONVERTED INTO A PYROGLUTAMATE COMPND 8 RESIDUE. C-TERMINUS RESIDUES NOT SEEN IN STRUCTURE.; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: APOPTOSIS REGULATOR BAX; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: BCL-2-LIKE PROTEIN 4,BCL2-L-4; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_TAXID: 10116; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 6 ORGANISM_TAXID: 10116; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_COMMON: HUMAN; SOURCE 10 ORGANISM_TAXID: 9606; SOURCE 11 GENE: BAX, BCL2L4; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FAB', BAX ACTIVATION, UNFOLDING, APOPTOSIS, APOPTOSIS-IMMUNE SYSTEM KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.Y.ROBIN,P.M.COLMAN,P.E.CZABOTAR REVDAT 5 04-OCT-23 5W5X 1 SEQRES REVDAT 4 17-OCT-18 5W5X 1 JRNL REVDAT 3 05-SEP-18 5W5X 1 JRNL REVDAT 2 29-AUG-18 5W5X 1 JRNL REVDAT 1 27-JUN-18 5W5X 0 JRNL AUTH A.Y.ROBIN,S.IYER,R.W.BIRKINSHAW,J.SANDOW,A.WARDAK,C.S.LUO, JRNL AUTH 2 M.SHI,A.I.WEBB,P.E.CZABOTAR,R.M.KLUCK,P.M.COLMAN JRNL TITL ENSEMBLE PROPERTIES OF BAX DETERMINE ITS FUNCTION. JRNL REF STRUCTURE V. 26 1346 2018 JRNL REFN ISSN 1878-4186 JRNL PMID 30122452 JRNL DOI 10.1016/J.STR.2018.07.006 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2152: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 24112 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 1204 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.6480 - 5.2014 0.93 2643 141 0.1820 0.2300 REMARK 3 2 5.2014 - 4.1293 0.96 2560 136 0.1467 0.1807 REMARK 3 3 4.1293 - 3.6075 0.97 2526 130 0.1622 0.2298 REMARK 3 4 3.6075 - 3.2778 0.98 2537 131 0.1857 0.2428 REMARK 3 5 3.2778 - 3.0429 0.98 2546 131 0.2009 0.2711 REMARK 3 6 3.0429 - 2.8635 0.99 2528 134 0.2208 0.2998 REMARK 3 7 2.8635 - 2.7201 0.99 2541 136 0.2395 0.3181 REMARK 3 8 2.7201 - 2.6017 0.99 2509 133 0.2610 0.3211 REMARK 3 9 2.6017 - 2.5016 0.98 2518 132 0.2815 0.3445 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4572 REMARK 3 ANGLE : 0.593 6212 REMARK 3 CHIRALITY : 0.042 716 REMARK 3 PLANARITY : 0.004 784 REMARK 3 DIHEDRAL : 13.958 2678 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN H AND RESID 1:117 OR CHAIN L AND RESID 1:109 REMARK 3 OR CHAIN A AND RESID 31:45 REMARK 3 ORIGIN FOR THE GROUP (A): -33.4830 -22.8092 -22.6287 REMARK 3 T TENSOR REMARK 3 T11: 0.2513 T22: 0.3264 REMARK 3 T33: 0.3020 T12: -0.0230 REMARK 3 T13: -0.0427 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 1.9558 L22: 1.5638 REMARK 3 L33: 1.9935 L12: 0.6779 REMARK 3 L13: -0.3995 L23: -0.4711 REMARK 3 S TENSOR REMARK 3 S11: 0.1786 S12: -0.2559 S13: -0.1330 REMARK 3 S21: 0.1627 S22: -0.1312 S23: -0.0011 REMARK 3 S31: 0.2092 S32: -0.0243 S33: -0.0360 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN H AND RESID 118:212 OR CHAIN L AND RESID REMARK 3 110:214 REMARK 3 ORIGIN FOR THE GROUP (A): -15.2007 6.1562 -12.5405 REMARK 3 T TENSOR REMARK 3 T11: 0.3261 T22: 0.3672 REMARK 3 T33: 0.3304 T12: -0.0135 REMARK 3 T13: -0.0314 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 1.7808 L22: 2.2441 REMARK 3 L33: 4.3146 L12: 0.3612 REMARK 3 L13: 0.6173 L23: 0.8585 REMARK 3 S TENSOR REMARK 3 S11: 0.0762 S12: -0.2998 S13: 0.1084 REMARK 3 S21: 0.0883 S22: -0.2896 S23: 0.2046 REMARK 3 S31: -0.3360 S32: -0.6136 S33: 0.1672 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 1:30 OR CHAIN A AND RESID 46:200 REMARK 3 ORIGIN FOR THE GROUP (A): -54.8691 -51.1524 -25.0970 REMARK 3 T TENSOR REMARK 3 T11: 0.3614 T22: 0.4497 REMARK 3 T33: 0.4884 T12: -0.0653 REMARK 3 T13: 0.0112 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 3.9049 L22: 6.2397 REMARK 3 L33: 3.0822 L12: 0.6820 REMARK 3 L13: 0.1365 L23: 0.7235 REMARK 3 S TENSOR REMARK 3 S11: 0.1781 S12: -0.0689 S13: 0.1458 REMARK 3 S21: 0.0796 S22: -0.1622 S23: -0.5929 REMARK 3 S31: -0.0019 S32: 0.4066 S33: -0.0169 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W5X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228421. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24112 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.502 REMARK 200 RESOLUTION RANGE LOW (A) : 47.639 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.10180 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.91180 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1ZAN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, HEPES, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 144.32150 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.15450 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.15450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.16075 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.15450 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.15450 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 216.48225 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.15450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.15450 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.16075 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.15450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.15450 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 216.48225 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 144.32150 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 52010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 ZN ZN L 307 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS L 213 REMARK 465 ALA H 134 REMARK 465 LEU H 135 REMARK 465 LYS H 136 REMARK 465 SER H 137 REMARK 465 ASN H 138 REMARK 465 ARG H 218 REMARK 465 GLU H 219 REMARK 465 CYS H 220 REMARK 465 ASN H 221 REMARK 465 PRO H 222 REMARK 465 CYS H 223 REMARK 465 GLY H 224 REMARK 465 CYS H 225 REMARK 465 THR H 226 REMARK 465 GLY H 227 REMARK 465 SER H 228 REMARK 465 GLU H 229 REMARK 465 VAL H 230 REMARK 465 SER H 231 REMARK 465 SER H 232 REMARK 465 VAL H 233 REMARK 465 PHE H 234 REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLN A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 GLY A 10 REMARK 465 GLY A 11 REMARK 465 PRO A 43 REMARK 465 GLU A 44 REMARK 465 LEU A 45 REMARK 465 ALA A 46 REMARK 465 LEU A 47 REMARK 465 ASP A 48 REMARK 465 PRO A 49 REMARK 465 VAL A 50 REMARK 465 PRO A 51 REMARK 465 GLN A 52 REMARK 465 LYS A 189 REMARK 465 LYS A 190 REMARK 465 MET A 191 REMARK 465 GLY A 192 REMARK 465 SER A 193 REMARK 465 SER A 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP L 1 CG OD1 OD2 REMARK 470 LYS L 24 CG CD CE NZ REMARK 470 LYS L 31 CE NZ REMARK 470 GLU L 153 CG CD OE1 OE2 REMARK 470 GLU L 212 CG CD OE1 OE2 REMARK 470 GLN H 3 CG CD OE1 NE2 REMARK 470 LYS H 13 CE NZ REMARK 470 GLN H 62 CG CD OE1 NE2 REMARK 470 LYS H 63 CG CD CE NZ REMARK 470 GLN H 82 CG CD OE1 NE2 REMARK 470 GLU H 89 CG CD OE1 OE2 REMARK 470 THR H 133 OG1 CG2 REMARK 470 LYS H 210 CG CD CE NZ REMARK 470 LYS H 214 CG CD CE NZ REMARK 470 GLU A 17 CG CD OE1 OE2 REMARK 470 LYS A 21 CG CD CE NZ REMARK 470 ASP A 53 CG OD1 OD2 REMARK 470 LYS A 57 CG CD CE NZ REMARK 470 LYS A 58 CE NZ REMARK 470 ASP A 86 CG OD1 OD2 REMARK 470 LYS A 123 CG CD CE NZ REMARK 470 SER A 126 OG REMARK 470 THR A 127 OG1 CG2 REMARK 470 LYS A 128 CG CD CE NZ REMARK 470 VAL A 129 CG1 CG2 REMARK 470 GLU A 131 CG CD OE1 OE2 REMARK 470 TRP A 188 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 188 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN L 30 -138.78 51.50 REMARK 500 THR L 51 -43.43 70.89 REMARK 500 ASN L 52 14.78 -149.41 REMARK 500 ASN L 189 -52.64 -121.64 REMARK 500 ASN L 211 38.75 -86.41 REMARK 500 THR H 104 -126.42 -103.95 REMARK 500 PRO H 131 104.26 -56.70 REMARK 500 SER H 165 -39.32 -149.18 REMARK 500 ARG A 37 -7.52 -157.04 REMARK 500 ASN A 104 78.25 -111.11 REMARK 500 SER A 126 126.82 -175.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN L 307 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS L 188 NE2 REMARK 620 2 HIS L 188 NE2 0.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO L 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN L 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO H 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5W5Z RELATED DB: PDB REMARK 900 RELATED ID: 5W60 RELATED DB: PDB REMARK 900 RELATED ID: 5W61 RELATED DB: PDB REMARK 900 RELATED ID: 5W62 RELATED DB: PDB REMARK 900 RELATED ID: 5W63 RELATED DB: PDB DBREF 5W5X L 1 213 PDB 5W5X 5W5X 1 213 DBREF 5W5X H 1 234 PDB 5W5X 5W5X 1 234 DBREF 5W5X A 1 192 UNP Q07812 BAX_HUMAN 1 192 SEQADV 5W5X SER A 62 UNP Q07812 CYS 62 ENGINEERED MUTATION SEQADV 5W5X SER A 126 UNP Q07812 CYS 126 ENGINEERED MUTATION SEQADV 5W5X GLY A 168 UNP Q07812 PRO 168 ENGINEERED MUTATION SEQADV 5W5X SER A 193 UNP Q07812 EXPRESSION TAG SEQADV 5W5X SER A 194 UNP Q07812 EXPRESSION TAG SEQRES 1 L 213 ASP ILE GLN MET THR GLN SER PRO SER PHE LEU SER ALA SEQRES 2 L 213 SER VAL GLY ASP ARG VAL THR ILE ASN CYS LYS ALA SER SEQRES 3 L 213 GLN ASN VAL ASN LYS TYR LEU ASP TRP TYR GLN GLN ASN SEQRES 4 L 213 LEU GLY GLU PRO PRO LYS LEU LEU ILE TYR HIS THR ASN SEQRES 5 L 213 SER LEU PRO THR GLY ILE PRO SER ARG PHE SER GLY SER SEQRES 6 L 213 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 213 GLN VAL GLU ASP VAL ALA THR TYR PHE CYS LEU GLN HIS SEQRES 8 L 213 ASP SER GLY LEU THR PHE GLY SER GLY THR LYS LEU GLU SEQRES 9 L 213 ILE LYS ARG ALA ASP ALA ALA PRO THR VAL SER ILE PHE SEQRES 10 L 213 PRO PRO SER MET GLU GLN LEU THR SER GLY GLY ALA THR SEQRES 11 L 213 VAL VAL CYS PHE VAL ASN ASN PHE TYR PRO ARG ASP ILE SEQRES 12 L 213 SER VAL LYS TRP LYS ILE ASP GLY SER GLU GLN ARG ASP SEQRES 13 L 213 GLY VAL LEU ASP SER VAL THR ASP GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER MET SER SER THR LEU SER LEU THR LYS SEQRES 15 L 213 VAL GLU TYR GLU ARG HIS ASN LEU TYR THR CYS GLU VAL SEQRES 16 L 213 VAL HIS LYS THR SER SER SER PRO VAL VAL LYS SER PHE SEQRES 17 L 213 ASN ARG ASN GLU CYS SEQRES 1 H 234 PCA VAL GLN LEU GLN GLN SER GLY ALA GLU LEU VAL LYS SEQRES 2 H 234 PRO GLY SER SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 234 TYR THR PHE THR ASN TYR ASP MET HIS TRP ILE LYS GLN SEQRES 4 H 234 ARG PRO GLY SER GLY LEU GLU TRP ILE GLY TRP ILE TYR SEQRES 5 H 234 PRO GLY ASN GLY ASN THR LYS TYR ASN GLN LYS PHE ASN SEQRES 6 H 234 GLY LYS ALA THR LEU THR ALA ASP LYS SER SER THR THR SEQRES 7 H 234 ALA TYR MET GLN LEU SER SER LEU THR SER GLU ASP SER SEQRES 8 H 234 ALA VAL TYR PHE CYS VAL ARG GLU GLY LEU GLY ILE THR SEQRES 9 H 234 PHE GLU TYR TRP GLY GLN GLY VAL LYS VAL THR VAL SER SEQRES 10 H 234 SER ALA GLU THR THR ALA PRO SER VAL TYR PRO LEU ALA SEQRES 11 H 234 PRO GLY THR ALA LEU LYS SER ASN SER MET VAL THR LEU SEQRES 12 H 234 GLY CYS LEU VAL LYS GLY TYR PHE PRO GLU PRO VAL THR SEQRES 13 H 234 VAL THR TRP ASN SER GLY ALA LEU SER SER GLY VAL HIS SEQRES 14 H 234 THR PHE PRO ALA VAL LEU GLN SER GLY LEU TYR THR LEU SEQRES 15 H 234 THR SER SER VAL THR VAL PRO SER SER THR TRP SER SER SEQRES 16 H 234 GLN ALA VAL THR CYS ASN VAL ALA HIS PRO ALA SER SER SEQRES 17 H 234 THR LYS VAL ASP LYS LYS ILE VAL PRO ARG GLU CYS ASN SEQRES 18 H 234 PRO CYS GLY CYS THR GLY SER GLU VAL SER SER VAL PHE SEQRES 1 A 194 MET ASP GLY SER GLY GLU GLN PRO ARG GLY GLY GLY PRO SEQRES 2 A 194 THR SER SER GLU GLN ILE MET LYS THR GLY ALA LEU LEU SEQRES 3 A 194 LEU GLN GLY PHE ILE GLN ASP ARG ALA GLY ARG MET GLY SEQRES 4 A 194 GLY GLU ALA PRO GLU LEU ALA LEU ASP PRO VAL PRO GLN SEQRES 5 A 194 ASP ALA SER THR LYS LYS LEU SER GLU SER LEU LYS ARG SEQRES 6 A 194 ILE GLY ASP GLU LEU ASP SER ASN MET GLU LEU GLN ARG SEQRES 7 A 194 MET ILE ALA ALA VAL ASP THR ASP SER PRO ARG GLU VAL SEQRES 8 A 194 PHE PHE ARG VAL ALA ALA ASP MET PHE SER ASP GLY ASN SEQRES 9 A 194 PHE ASN TRP GLY ARG VAL VAL ALA LEU PHE TYR PHE ALA SEQRES 10 A 194 SER LYS LEU VAL LEU LYS ALA LEU SER THR LYS VAL PRO SEQRES 11 A 194 GLU LEU ILE ARG THR ILE MET GLY TRP THR LEU ASP PHE SEQRES 12 A 194 LEU ARG GLU ARG LEU LEU GLY TRP ILE GLN ASP GLN GLY SEQRES 13 A 194 GLY TRP ASP GLY LEU LEU SER TYR PHE GLY THR GLY THR SEQRES 14 A 194 TRP GLN THR VAL THR ILE PHE VAL ALA GLY VAL LEU THR SEQRES 15 A 194 ALA SER LEU THR ILE TRP LYS LYS MET GLY SER SER HET PCA H 1 8 HET EDO L 301 4 HET EDO L 302 4 HET EDO L 303 4 HET EDO L 304 4 HET EDO L 305 4 HET EDO L 306 4 HET ZN L 307 1 HET EDO H 301 4 HET EDO H 302 4 HET EDO H 303 4 HETNAM PCA PYROGLUTAMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM ZN ZINC ION HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PCA C5 H7 N O3 FORMUL 4 EDO 9(C2 H6 O2) FORMUL 10 ZN ZN 2+ FORMUL 14 HOH *98(H2 O) HELIX 1 AA1 GLN L 79 VAL L 83 5 5 HELIX 2 AA2 SER L 120 SER L 126 1 7 HELIX 3 AA3 LYS L 182 GLU L 186 1 5 HELIX 4 AA4 THR H 28 TYR H 32 5 5 HELIX 5 AA5 GLN H 62 ASN H 65 5 4 HELIX 6 AA6 THR H 87 SER H 91 5 5 HELIX 7 AA7 SER H 161 ALA H 163 5 3 HELIX 8 AA8 SER H 190 GLN H 196 1 7 HELIX 9 AA9 PRO H 205 SER H 208 5 4 HELIX 10 AB1 SER A 15 ILE A 31 1 17 HELIX 11 AB2 ALA A 54 SER A 72 1 19 HELIX 12 AB3 ASN A 73 ALA A 82 1 10 HELIX 13 AB4 SER A 87 SER A 101 1 15 HELIX 14 AB5 ASN A 106 ALA A 124 1 19 HELIX 15 AB6 LYS A 128 LEU A 148 1 21 HELIX 16 AB7 LEU A 148 GLN A 155 1 8 HELIX 17 AB8 TRP A 158 PHE A 165 1 8 HELIX 18 AB9 THR A 169 THR A 186 1 18 SHEET 1 AA1 4 MET L 4 SER L 7 0 SHEET 2 AA1 4 VAL L 19 ALA L 25 -1 O LYS L 24 N THR L 5 SHEET 3 AA1 4 ASP L 70 ILE L 75 -1 O ILE L 75 N VAL L 19 SHEET 4 AA1 4 PHE L 62 GLY L 66 -1 N SER L 65 O THR L 72 SHEET 1 AA2 5 PHE L 10 ALA L 13 0 SHEET 2 AA2 5 THR L 101 ILE L 105 1 O GLU L 104 N LEU L 11 SHEET 3 AA2 5 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 101 SHEET 4 AA2 5 LEU L 33 GLN L 38 -1 N TYR L 36 O PHE L 87 SHEET 5 AA2 5 LYS L 45 ILE L 48 -1 O ILE L 48 N TRP L 35 SHEET 1 AA3 4 PHE L 10 ALA L 13 0 SHEET 2 AA3 4 THR L 101 ILE L 105 1 O GLU L 104 N LEU L 11 SHEET 3 AA3 4 THR L 85 GLN L 90 -1 N TYR L 86 O THR L 101 SHEET 4 AA3 4 THR L 96 PHE L 97 -1 O THR L 96 N GLN L 90 SHEET 1 AA4 4 THR L 113 PHE L 117 0 SHEET 2 AA4 4 GLY L 128 PHE L 138 -1 O VAL L 132 N PHE L 117 SHEET 3 AA4 4 TYR L 172 THR L 181 -1 O MET L 174 N VAL L 135 SHEET 4 AA4 4 VAL L 158 VAL L 162 -1 N SER L 161 O SER L 175 SHEET 1 AA5 4 SER L 152 GLN L 154 0 SHEET 2 AA5 4 ILE L 143 ILE L 149 -1 N ILE L 149 O SER L 152 SHEET 3 AA5 4 LEU L 190 HIS L 197 -1 O GLU L 194 N LYS L 146 SHEET 4 AA5 4 VAL L 204 ASN L 209 -1 O LYS L 206 N CYS L 193 SHEET 1 AA6 4 GLN H 3 GLN H 6 0 SHEET 2 AA6 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA6 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 AA6 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA7 6 GLU H 10 VAL H 12 0 SHEET 2 AA7 6 VAL H 112 VAL H 116 1 O THR H 115 N GLU H 10 SHEET 3 AA7 6 ALA H 92 GLU H 99 -1 N ALA H 92 O VAL H 114 SHEET 4 AA7 6 MET H 34 ARG H 40 -1 N HIS H 35 O VAL H 97 SHEET 5 AA7 6 GLY H 44 ILE H 51 -1 O GLY H 44 N ARG H 40 SHEET 6 AA7 6 THR H 58 TYR H 60 -1 O LYS H 59 N TRP H 50 SHEET 1 AA8 4 GLU H 10 VAL H 12 0 SHEET 2 AA8 4 VAL H 112 VAL H 116 1 O THR H 115 N GLU H 10 SHEET 3 AA8 4 ALA H 92 GLU H 99 -1 N ALA H 92 O VAL H 114 SHEET 4 AA8 4 PHE H 105 TRP H 108 -1 O TYR H 107 N ARG H 98 SHEET 1 AA9 4 SER H 125 LEU H 129 0 SHEET 2 AA9 4 MET H 140 TYR H 150 -1 O GLY H 144 N LEU H 129 SHEET 3 AA9 4 LEU H 179 PRO H 189 -1 O VAL H 186 N LEU H 143 SHEET 4 AA9 4 VAL H 168 THR H 170 -1 N HIS H 169 O SER H 185 SHEET 1 AB1 4 SER H 125 LEU H 129 0 SHEET 2 AB1 4 MET H 140 TYR H 150 -1 O GLY H 144 N LEU H 129 SHEET 3 AB1 4 LEU H 179 PRO H 189 -1 O VAL H 186 N LEU H 143 SHEET 4 AB1 4 VAL H 174 GLN H 176 -1 N VAL H 174 O THR H 181 SHEET 1 AB2 3 THR H 156 TRP H 159 0 SHEET 2 AB2 3 THR H 199 HIS H 204 -1 O ASN H 201 N THR H 158 SHEET 3 AB2 3 THR H 209 LYS H 214 -1 O THR H 209 N HIS H 204 SSBOND 1 CYS L 23 CYS L 88 1555 1555 2.04 SSBOND 2 CYS L 133 CYS L 193 1555 1555 2.03 SSBOND 3 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 4 CYS H 145 CYS H 200 1555 1555 2.04 LINK C PCA H 1 N VAL H 2 1555 1555 1.33 LINK NE2 HIS L 188 ZN ZN L 307 1555 1555 2.25 LINK NE2 HIS L 188 ZN ZN L 307 1555 7555 2.25 CISPEP 1 SER L 7 PRO L 8 0 -3.49 CISPEP 2 TYR L 139 PRO L 140 0 6.94 CISPEP 3 PHE H 151 PRO H 152 0 -5.83 CISPEP 4 GLU H 153 PRO H 154 0 0.62 SITE 1 AC1 5 SER L 12 GLU L 104 PRO L 140 ARG L 141 SITE 2 AC1 5 ASP L 142 SITE 1 AC2 4 ASN L 39 LEU L 40 GLY L 41 GLU L 42 SITE 1 AC3 3 SER L 12 THR L 56 LYS L 106 SITE 1 AC4 1 ASP L 150 SITE 1 AC5 3 ARG L 141 MET L 174 HOH L 405 SITE 1 AC6 6 GLN L 37 LYS L 45 ARG L 61 PHE L 62 SITE 2 AC6 6 GLU L 81 ASP L 82 SITE 1 AC7 2 GLU L 184 HIS L 188 SITE 1 AC8 9 PHE H 171 PRO H 172 LEU H 182 THR H 183 SITE 2 AC8 9 HOH H 425 LEU L 159 SER L 161 SER L 175 SITE 3 AC8 9 THR L 177 SITE 1 AC9 2 GLN H 110 GLY H 111 SITE 1 AD1 2 ALA A 42 GLN H 196 CRYST1 68.309 68.309 288.643 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014639 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014639 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003464 0.00000