HEADER TRANSFERASE/INHIBITOR 16-JUN-17 5W6O TITLE CHOLINE KINASE ALPHA IN COMPLEX WITH TCD-717 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHOLINE KINASE ALPHA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 80-457; COMPND 5 SYNONYM: CK,CHETK-ALPHA,ETHANOLAMINE KINASE,EK; COMPND 6 EC: 2.7.1.32,2.7.1.82; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CHKA, CHK, CKI; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENZYME, INHIBITOR, DRUG, TRANSFERASE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.K.KALL,A.LAVIE REVDAT 3 11-DEC-19 5W6O 1 REMARK REVDAT 2 07-MAR-18 5W6O 1 JRNL REVDAT 1 14-FEB-18 5W6O 0 JRNL AUTH S.L.KALL,E.J.DELIKATNY,A.LAVIE JRNL TITL IDENTIFICATION OF A UNIQUE INHIBITOR-BINDING SITE ON CHOLINE JRNL TITL 2 KINASE ALPHA. JRNL REF BIOCHEMISTRY V. 57 1316 2018 JRNL REFN ISSN 1520-4995 JRNL PMID 29389115 JRNL DOI 10.1021/ACS.BIOCHEM.7B01257 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 36241 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.268 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1951 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2653 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3700 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.3470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5859 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 144 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 53.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.61000 REMARK 3 B22 (A**2) : 1.85000 REMARK 3 B33 (A**2) : -1.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.370 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.267 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.274 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.012 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6257 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5767 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8438 ; 1.498 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13367 ; 0.993 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 715 ; 5.660 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 308 ;33.484 ;23.149 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1114 ;15.536 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 49 ;17.548 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 848 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6846 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1427 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2851 ; 3.892 ; 5.197 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2850 ; 3.891 ; 5.196 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3569 ; 6.133 ; 7.782 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3570 ; 6.133 ; 7.783 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3406 ; 4.204 ; 5.604 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3406 ; 4.204 ; 5.604 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4870 ; 6.666 ; 8.224 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7095 ; 9.507 ;56.670 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7096 ; 9.507 ;56.673 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 81 456 B 81 456 23124 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5W6O COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228519. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38250 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.340 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.880 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.5 18% PEG 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.97500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.70000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 65.70000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.97500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 80 REMARK 465 ALA A 150 REMARK 465 ILE A 151 REMARK 465 LEU A 152 REMARK 465 GLN A 153 REMARK 465 MET A 154 REMARK 465 ARG A 155 REMARK 465 SER A 156 REMARK 465 CYS A 157 REMARK 465 ASN A 158 REMARK 465 LYS A 159 REMARK 465 GLU A 160 REMARK 465 GLY A 161 REMARK 465 SER A 162 REMARK 465 GLU A 163 REMARK 465 GLN A 164 REMARK 465 ALA A 165 REMARK 465 GLN A 166 REMARK 465 LYS A 167 REMARK 465 GLU A 168 REMARK 465 ASN A 169 REMARK 465 GLU A 170 REMARK 465 PHE A 171 REMARK 465 GLN A 172 REMARK 465 GLY A 173 REMARK 465 ALA A 174 REMARK 465 ALA B 150 REMARK 465 ILE B 151 REMARK 465 LEU B 152 REMARK 465 GLN B 153 REMARK 465 MET B 154 REMARK 465 ARG B 155 REMARK 465 SER B 156 REMARK 465 CYS B 157 REMARK 465 ASN B 158 REMARK 465 LYS B 159 REMARK 465 GLU B 160 REMARK 465 GLY B 161 REMARK 465 SER B 162 REMARK 465 GLU B 163 REMARK 465 GLN B 164 REMARK 465 ALA B 165 REMARK 465 GLN B 166 REMARK 465 LYS B 167 REMARK 465 GLU B 168 REMARK 465 ASN B 169 REMARK 465 GLU B 170 REMARK 465 PHE B 171 REMARK 465 GLN B 172 REMARK 465 GLY B 173 REMARK 465 ALA B 174 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 81 CG CD OE1 OE2 REMARK 470 ASP B 80 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 444 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 122 80.39 48.54 REMARK 500 PRO A 241 41.43 -81.68 REMARK 500 ASN A 281 75.32 58.66 REMARK 500 ASP A 306 42.05 -157.48 REMARK 500 ASP A 330 77.35 64.66 REMARK 500 THR A 395 -50.02 -27.03 REMARK 500 ASN B 122 80.77 50.64 REMARK 500 PRO B 241 43.42 -83.27 REMARK 500 ASN B 281 76.06 56.61 REMARK 500 ASP B 306 41.21 -157.98 REMARK 500 ASP B 330 77.28 65.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 679 DISTANCE = 6.41 ANGSTROMS REMARK 525 HOH A 680 DISTANCE = 7.13 ANGSTROMS REMARK 525 HOH B 695 DISTANCE = 7.70 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9X1 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 9X1 B 501 and TRP B REMARK 800 248 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide 9X1 B 501 and TRP B REMARK 800 248 DBREF 5W6O A 80 457 UNP P35790 CHKA_HUMAN 80 457 DBREF 5W6O B 80 457 UNP P35790 CHKA_HUMAN 80 457 SEQRES 1 A 378 ASP GLU GLN PRO GLU PRO ARG THR ARG ARG ARG ALA TYR SEQRES 2 A 378 LEU TRP CYS LYS GLU PHE LEU PRO GLY ALA TRP ARG GLY SEQRES 3 A 378 LEU ARG GLU ASP GLU PHE HIS ILE SER VAL ILE ARG GLY SEQRES 4 A 378 GLY LEU SER ASN MET LEU PHE GLN CYS SER LEU PRO ASP SEQRES 5 A 378 THR THR ALA THR LEU GLY ASP GLU PRO ARG LYS VAL LEU SEQRES 6 A 378 LEU ARG LEU TYR GLY ALA ILE LEU GLN MET ARG SER CYS SEQRES 7 A 378 ASN LYS GLU GLY SER GLU GLN ALA GLN LYS GLU ASN GLU SEQRES 8 A 378 PHE GLN GLY ALA GLU ALA MET VAL LEU GLU SER VAL MET SEQRES 9 A 378 PHE ALA ILE LEU ALA GLU ARG SER LEU GLY PRO LYS LEU SEQRES 10 A 378 TYR GLY ILE PHE PRO GLN GLY ARG LEU GLU GLN PHE ILE SEQRES 11 A 378 PRO SER ARG ARG LEU ASP THR GLU GLU LEU SER LEU PRO SEQRES 12 A 378 ASP ILE SER ALA GLU ILE ALA GLU LYS MET ALA THR PHE SEQRES 13 A 378 HIS GLY MET LYS MET PRO PHE ASN LYS GLU PRO LYS TRP SEQRES 14 A 378 LEU PHE GLY THR MET GLU LYS TYR LEU LYS GLU VAL LEU SEQRES 15 A 378 ARG ILE LYS PHE THR GLU GLU SER ARG ILE LYS LYS LEU SEQRES 16 A 378 HIS LYS LEU LEU SER TYR ASN LEU PRO LEU GLU LEU GLU SEQRES 17 A 378 ASN LEU ARG SER LEU LEU GLU SER THR PRO SER PRO VAL SEQRES 18 A 378 VAL PHE CYS HIS ASN ASP CYS GLN GLU GLY ASN ILE LEU SEQRES 19 A 378 LEU LEU GLU GLY ARG GLU ASN SER GLU LYS GLN LYS LEU SEQRES 20 A 378 MET LEU ILE ASP PHE GLU TYR SER SER TYR ASN TYR ARG SEQRES 21 A 378 GLY PHE ASP ILE GLY ASN HIS PHE CYS GLU TRP MET TYR SEQRES 22 A 378 ASP TYR SER TYR GLU LYS TYR PRO PHE PHE ARG ALA ASN SEQRES 23 A 378 ILE ARG LYS TYR PRO THR LYS LYS GLN GLN LEU HIS PHE SEQRES 24 A 378 ILE SER SER TYR LEU PRO ALA PHE GLN ASN ASP PHE GLU SEQRES 25 A 378 ASN LEU SER THR GLU GLU LYS SER ILE ILE LYS GLU GLU SEQRES 26 A 378 MET LEU LEU GLU VAL ASN ARG PHE ALA LEU ALA SER HIS SEQRES 27 A 378 PHE LEU TRP GLY LEU TRP SER ILE VAL GLN ALA LYS ILE SEQRES 28 A 378 SER SER ILE GLU PHE GLY TYR MET ASP TYR ALA GLN ALA SEQRES 29 A 378 ARG PHE ASP ALA TYR PHE HIS GLN LYS ARG LYS LEU GLY SEQRES 30 A 378 VAL SEQRES 1 B 378 ASP GLU GLN PRO GLU PRO ARG THR ARG ARG ARG ALA TYR SEQRES 2 B 378 LEU TRP CYS LYS GLU PHE LEU PRO GLY ALA TRP ARG GLY SEQRES 3 B 378 LEU ARG GLU ASP GLU PHE HIS ILE SER VAL ILE ARG GLY SEQRES 4 B 378 GLY LEU SER ASN MET LEU PHE GLN CYS SER LEU PRO ASP SEQRES 5 B 378 THR THR ALA THR LEU GLY ASP GLU PRO ARG LYS VAL LEU SEQRES 6 B 378 LEU ARG LEU TYR GLY ALA ILE LEU GLN MET ARG SER CYS SEQRES 7 B 378 ASN LYS GLU GLY SER GLU GLN ALA GLN LYS GLU ASN GLU SEQRES 8 B 378 PHE GLN GLY ALA GLU ALA MET VAL LEU GLU SER VAL MET SEQRES 9 B 378 PHE ALA ILE LEU ALA GLU ARG SER LEU GLY PRO LYS LEU SEQRES 10 B 378 TYR GLY ILE PHE PRO GLN GLY ARG LEU GLU GLN PHE ILE SEQRES 11 B 378 PRO SER ARG ARG LEU ASP THR GLU GLU LEU SER LEU PRO SEQRES 12 B 378 ASP ILE SER ALA GLU ILE ALA GLU LYS MET ALA THR PHE SEQRES 13 B 378 HIS GLY MET LYS MET PRO PHE ASN LYS GLU PRO LYS TRP SEQRES 14 B 378 LEU PHE GLY THR MET GLU LYS TYR LEU LYS GLU VAL LEU SEQRES 15 B 378 ARG ILE LYS PHE THR GLU GLU SER ARG ILE LYS LYS LEU SEQRES 16 B 378 HIS LYS LEU LEU SER TYR ASN LEU PRO LEU GLU LEU GLU SEQRES 17 B 378 ASN LEU ARG SER LEU LEU GLU SER THR PRO SER PRO VAL SEQRES 18 B 378 VAL PHE CYS HIS ASN ASP CYS GLN GLU GLY ASN ILE LEU SEQRES 19 B 378 LEU LEU GLU GLY ARG GLU ASN SER GLU LYS GLN LYS LEU SEQRES 20 B 378 MET LEU ILE ASP PHE GLU TYR SER SER TYR ASN TYR ARG SEQRES 21 B 378 GLY PHE ASP ILE GLY ASN HIS PHE CYS GLU TRP MET TYR SEQRES 22 B 378 ASP TYR SER TYR GLU LYS TYR PRO PHE PHE ARG ALA ASN SEQRES 23 B 378 ILE ARG LYS TYR PRO THR LYS LYS GLN GLN LEU HIS PHE SEQRES 24 B 378 ILE SER SER TYR LEU PRO ALA PHE GLN ASN ASP PHE GLU SEQRES 25 B 378 ASN LEU SER THR GLU GLU LYS SER ILE ILE LYS GLU GLU SEQRES 26 B 378 MET LEU LEU GLU VAL ASN ARG PHE ALA LEU ALA SER HIS SEQRES 27 B 378 PHE LEU TRP GLY LEU TRP SER ILE VAL GLN ALA LYS ILE SEQRES 28 B 378 SER SER ILE GLU PHE GLY TYR MET ASP TYR ALA GLN ALA SEQRES 29 B 378 ARG PHE ASP ALA TYR PHE HIS GLN LYS ARG LYS LEU GLY SEQRES 30 B 378 VAL HET 9X1 A 501 52 HET MES A 502 12 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HET 9X1 B 501 52 HET MES B 502 12 HET EDO B 503 4 HETNAM 9X1 1,1'-[[1,1'-BIPHENYL]-4,4'-DIYLBIS(METHYLENE)]BIS{4- HETNAM 2 9X1 [(4-CHLOROPHENYL)(METHYL)AMINO]QUINOLIN-1-IUM} HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM EDO 1,2-ETHANEDIOL HETSYN 9X1 TCD-717 HETSYN EDO ETHYLENE GLYCOL FORMUL 3 9X1 2(C46 H38 CL2 N4 2+) FORMUL 4 MES 2(C6 H13 N O4 S) FORMUL 5 EDO 4(C2 H6 O2) FORMUL 11 HOH *175(H2 O) HELIX 1 AA1 GLU A 84 LEU A 99 1 16 HELIX 2 AA2 PRO A 100 LEU A 106 5 7 HELIX 3 AA3 ARG A 107 PHE A 111 5 5 HELIX 4 AA4 ALA A 176 ARG A 190 1 15 HELIX 5 AA5 ASP A 215 SER A 220 5 6 HELIX 6 AA6 LEU A 221 GLY A 237 1 17 HELIX 7 AA7 LYS A 247 ARG A 262 1 16 HELIX 8 AA8 GLU A 267 SER A 279 1 13 HELIX 9 AA9 ASN A 281 SER A 295 1 15 HELIX 10 AB1 GLN A 308 GLY A 310 5 3 HELIX 11 AB2 GLY A 317 SER A 321 5 5 HELIX 12 AB3 ARG A 339 GLU A 349 1 11 HELIX 13 AB4 ILE A 366 TYR A 369 5 4 HELIX 14 AB5 THR A 371 GLN A 387 1 17 HELIX 15 AB6 ASN A 388 LEU A 393 5 6 HELIX 16 AB7 SER A 394 SER A 431 1 38 HELIX 17 AB8 GLY A 436 GLY A 456 1 21 HELIX 18 AB9 GLU B 84 LEU B 99 1 16 HELIX 19 AC1 PRO B 100 LEU B 106 5 7 HELIX 20 AC2 ARG B 107 PHE B 111 5 5 HELIX 21 AC3 ALA B 176 ARG B 190 1 15 HELIX 22 AC4 ASP B 215 SER B 220 5 6 HELIX 23 AC5 LEU B 221 GLY B 237 1 17 HELIX 24 AC6 LYS B 247 ARG B 262 1 16 HELIX 25 AC7 GLU B 267 SER B 279 1 13 HELIX 26 AC8 ASN B 281 SER B 295 1 15 HELIX 27 AC9 GLN B 308 GLY B 310 5 3 HELIX 28 AD1 GLY B 317 SER B 321 5 5 HELIX 29 AD2 ARG B 339 GLU B 349 1 11 HELIX 30 AD3 ILE B 366 TYR B 369 5 4 HELIX 31 AD4 THR B 371 GLN B 387 1 17 HELIX 32 AD5 ASN B 388 LEU B 393 5 6 HELIX 33 AD6 SER B 394 SER B 431 1 38 HELIX 34 AD7 GLY B 436 GLY B 456 1 21 SHEET 1 AA1 5 HIS A 112 ARG A 117 0 SHEET 2 AA1 5 MET A 123 SER A 128 -1 O SER A 128 N HIS A 112 SHEET 3 AA1 5 LYS A 142 LEU A 147 -1 O VAL A 143 N CYS A 127 SHEET 4 AA1 5 GLY A 203 GLN A 207 -1 O GLU A 206 N LEU A 144 SHEET 5 AA1 5 LEU A 196 PHE A 200 -1 N TYR A 197 O LEU A 205 SHEET 1 AA2 3 SER A 211 ARG A 213 0 SHEET 2 AA2 3 ILE A 312 LEU A 315 -1 O LEU A 314 N ARG A 212 SHEET 3 AA2 3 LEU A 326 LEU A 328 -1 O MET A 327 N LEU A 313 SHEET 1 AA3 2 VAL A 300 CYS A 303 0 SHEET 2 AA3 2 SER A 335 TYR A 338 -1 O SER A 335 N CYS A 303 SHEET 1 AA4 2 TYR A 352 ASP A 353 0 SHEET 2 AA4 2 ARG A 363 ALA A 364 -1 O ARG A 363 N ASP A 353 SHEET 1 AA5 5 HIS B 112 ARG B 117 0 SHEET 2 AA5 5 MET B 123 SER B 128 -1 O SER B 128 N HIS B 112 SHEET 3 AA5 5 LYS B 142 LEU B 147 -1 O VAL B 143 N CYS B 127 SHEET 4 AA5 5 GLY B 203 GLN B 207 -1 O GLU B 206 N LEU B 144 SHEET 5 AA5 5 LEU B 196 PHE B 200 -1 N TYR B 197 O LEU B 205 SHEET 1 AA6 3 SER B 211 ARG B 213 0 SHEET 2 AA6 3 ILE B 312 LEU B 315 -1 O LEU B 314 N ARG B 212 SHEET 3 AA6 3 LEU B 326 LEU B 328 -1 O MET B 327 N LEU B 313 SHEET 1 AA7 2 VAL B 300 CYS B 303 0 SHEET 2 AA7 2 SER B 335 TYR B 338 -1 O SER B 335 N CYS B 303 SHEET 1 AA8 2 TYR B 352 ASP B 353 0 SHEET 2 AA8 2 ARG B 363 ALA B 364 -1 O ARG B 363 N ASP B 353 LINK CE3BTRP A 248 CL7 9X1 A 501 1555 1555 1.94 LINK CZ2BTRP A 248 C4 9X1 A 501 1555 1555 1.46 LINK CZ2BTRP A 248 C3 9X1 A 501 1555 1555 1.48 LINK CZ3BTRP A 248 C4 9X1 A 501 1555 1555 1.61 LINK CH2BTRP A 248 C5 9X1 A 501 1555 1555 1.51 LINK CZ2BTRP B 248 C47 9X1 B 501 1555 1555 1.65 LINK CH2BTRP B 248 C48 9X1 B 501 1555 1555 1.08 CISPEP 1 TYR A 359 PRO A 360 0 9.89 CISPEP 2 TYR B 359 PRO B 360 0 10.06 SITE 1 AC1 11 TYR A 148 MET A 177 GLU A 180 PHE A 200 SITE 2 AC1 11 PRO A 201 TRP A 248 THR A 252 TYR A 256 SITE 3 AC1 11 TYR A 333 ASN A 337 PHE A 341 SITE 1 AC2 6 ASP A 306 GLN A 308 GLU A 349 TRP A 420 SITE 2 AC2 6 TRP A 423 PHE A 435 SITE 1 AC3 2 TYR A 352 ALA A 443 SITE 1 AC4 5 MET A 351 HIS A 417 ALA A 447 HIS A 450 SITE 2 AC4 5 GLN A 451 SITE 1 AC5 6 GLU A 217 TRP A 350 MET A 351 ARG A 363 SITE 2 AC5 6 LYS A 368 GLU B 84 SITE 1 AC6 6 ASP B 306 GLN B 308 GLU B 349 TRP B 420 SITE 2 AC6 6 TYR B 440 HOH B 620 SITE 1 AC7 5 TYR B 369 HIS B 417 HIS B 450 GLN B 451 SITE 2 AC7 5 LYS B 454 SITE 1 AC8 20 LEU A 179 TYR B 148 MET B 177 PHE B 200 SITE 2 AC8 20 PRO B 201 PRO B 246 LYS B 247 LEU B 249 SITE 3 AC8 20 PHE B 250 GLY B 251 THR B 252 TYR B 256 SITE 4 AC8 20 ASN B 305 TYR B 333 SER B 335 ASN B 337 SITE 5 AC8 20 PHE B 341 LEU B 419 TRP B 420 TRP B 423 SITE 1 AC9 20 LEU A 179 TYR B 148 MET B 177 PHE B 200 SITE 2 AC9 20 PRO B 201 PRO B 246 LYS B 247 LEU B 249 SITE 3 AC9 20 PHE B 250 GLY B 251 THR B 252 TYR B 256 SITE 4 AC9 20 ASN B 305 TYR B 333 SER B 335 ASN B 337 SITE 5 AC9 20 PHE B 341 LEU B 419 TRP B 420 TRP B 423 CRYST1 55.950 122.350 131.400 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017873 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008173 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007610 0.00000