HEADER HYDROLASE 19-JUN-17 5W7D TITLE MURINE ACYLOXYACYL HYDROLASE (AOAH), S262A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACYLOXYACYL HYDROLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 23-574; COMPND 5 EC: 3.1.1.77; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AOAH; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS LIPOPOLYSACCHARIDE, LPS, GDSL ESTERASE, SAPOSIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.GORELIK,K.ILLES,B.NAGAR REVDAT 7 13-NOV-24 5W7D 1 HETSYN REVDAT 6 29-JUL-20 5W7D 1 COMPND REMARK HETNAM LINK REVDAT 6 2 1 SITE ATOM REVDAT 5 08-JAN-20 5W7D 1 REMARK REVDAT 4 14-FEB-18 5W7D 1 JRNL REVDAT 3 31-JAN-18 5W7D 1 JRNL REVDAT 2 17-JAN-18 5W7D 1 JRNL REVDAT 1 03-JAN-18 5W7D 0 JRNL AUTH A.GORELIK,K.ILLES,B.NAGAR JRNL TITL CRYSTAL STRUCTURE OF THE MAMMALIAN LIPOPOLYSACCHARIDE JRNL TITL 2 DETOXIFIER. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E896 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29343645 JRNL DOI 10.1073/PNAS.1719834115 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.70 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 3 NUMBER OF REFLECTIONS : 58482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.152 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2924 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7128 - 4.8253 1.00 3049 160 0.1683 0.1897 REMARK 3 2 4.8253 - 3.8311 1.00 2976 157 0.1272 0.1277 REMARK 3 3 3.8311 - 3.3471 1.00 2998 158 0.1340 0.1740 REMARK 3 4 3.3471 - 3.0412 1.00 2989 158 0.1403 0.1605 REMARK 3 5 3.0412 - 2.8233 1.00 2976 157 0.1403 0.1651 REMARK 3 6 2.8233 - 2.6569 1.00 2976 155 0.1360 0.1749 REMARK 3 7 2.6569 - 2.5238 1.00 2967 159 0.1385 0.1671 REMARK 3 8 2.5238 - 2.4140 1.00 2986 154 0.1364 0.1798 REMARK 3 9 2.4140 - 2.3211 1.00 2948 155 0.1422 0.1906 REMARK 3 10 2.3211 - 2.2410 1.00 2987 159 0.1408 0.1982 REMARK 3 11 2.2410 - 2.1709 1.00 2995 158 0.1537 0.1903 REMARK 3 12 2.1709 - 2.1089 1.00 2949 154 0.1635 0.2045 REMARK 3 13 2.1089 - 2.0534 1.00 2955 156 0.1725 0.1950 REMARK 3 14 2.0534 - 2.0033 0.98 2913 153 0.1806 0.2012 REMARK 3 15 2.0033 - 1.9577 0.92 2731 144 0.1788 0.2195 REMARK 3 16 1.9577 - 1.9161 0.83 2470 131 0.1945 0.2301 REMARK 3 17 1.9161 - 1.8777 0.75 2204 115 0.2005 0.2412 REMARK 3 18 1.8777 - 1.8423 0.67 1991 105 0.2130 0.2513 REMARK 3 19 1.8423 - 1.8094 0.59 1738 91 0.2239 0.2199 REMARK 3 20 1.8094 - 1.7787 0.51 1521 81 0.2332 0.2585 REMARK 3 21 1.7787 - 1.7500 0.41 1239 64 0.2457 0.3076 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4588 REMARK 3 ANGLE : 1.032 6251 REMARK 3 CHIRALITY : 0.057 679 REMARK 3 PLANARITY : 0.007 804 REMARK 3 DIHEDRAL : 12.400 2797 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0780 -35.1569 126.0670 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.1026 REMARK 3 T33: 0.1109 T12: -0.0110 REMARK 3 T13: -0.0237 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.0819 L22: 0.2195 REMARK 3 L33: 0.2734 L12: 0.0370 REMARK 3 L13: 0.0252 L23: 0.0106 REMARK 3 S TENSOR REMARK 3 S11: 0.0548 S12: -0.0059 S13: -0.0680 REMARK 3 S21: 0.1511 S22: -0.0328 S23: -0.1922 REMARK 3 S31: 0.1883 S32: 0.1256 S33: -0.0384 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 100 THROUGH 176 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.9691 -26.0165 125.8106 REMARK 3 T TENSOR REMARK 3 T11: 0.1150 T22: 0.2534 REMARK 3 T33: 0.2101 T12: -0.0015 REMARK 3 T13: -0.0219 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 0.0228 L22: 0.4873 REMARK 3 L33: 0.2221 L12: -0.0935 REMARK 3 L13: -0.0094 L23: -0.1176 REMARK 3 S TENSOR REMARK 3 S11: 0.1116 S12: 0.1344 S13: 0.0053 REMARK 3 S21: 0.0379 S22: -0.0732 S23: -0.2286 REMARK 3 S31: -0.0141 S32: 0.2171 S33: 0.0512 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 177 THROUGH 487 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.5101 -16.6494 100.6549 REMARK 3 T TENSOR REMARK 3 T11: -0.0289 T22: 0.0196 REMARK 3 T33: 0.0373 T12: 0.0173 REMARK 3 T13: 0.0249 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.4401 L22: 1.0423 REMARK 3 L33: 1.1340 L12: 0.0216 REMARK 3 L13: -0.0743 L23: -0.2815 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: 0.0559 S13: -0.0167 REMARK 3 S21: -0.1363 S22: -0.0663 S23: -0.0286 REMARK 3 S31: 0.0737 S32: 0.0346 S33: -0.0717 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 488 THROUGH 574 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.6249 -9.6563 101.4359 REMARK 3 T TENSOR REMARK 3 T11: -0.1403 T22: 0.1510 REMARK 3 T33: 0.0756 T12: 0.0625 REMARK 3 T13: 0.0654 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.1248 L22: 0.6362 REMARK 3 L33: 0.3015 L12: 0.0314 REMARK 3 L13: -0.0939 L23: 0.1934 REMARK 3 S TENSOR REMARK 3 S11: -0.1411 S12: 0.0066 S13: 0.0414 REMARK 3 S21: -0.3772 S22: 0.0126 S23: 0.3811 REMARK 3 S31: -0.2480 S32: -0.3257 S33: -0.2850 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W7D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228555. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 66110 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM ACETATE PH 4.6, 15% PEG REMARK 280 20000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 49.29500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 13 REMARK 465 ARG A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 HIS A 20 REMARK 465 LYS A 21 REMARK 465 LEU A 22 REMARK 465 SER A 23 REMARK 465 VAL A 24 REMARK 465 PRO A 25 REMARK 465 SER A 26 REMARK 465 GLU A 27 REMARK 465 ASP A 28 REMARK 465 GLN A 29 REMARK 465 PRO A 30 REMARK 465 GLY A 31 REMARK 465 ASP A 32 REMARK 465 SER A 33 REMARK 465 TYR A 34 REMARK 465 SER A 147 REMARK 465 THR A 148 REMARK 465 MET A 149 REMARK 465 LYS A 150 REMARK 465 TYR A 151 REMARK 465 ARG A 152 REMARK 465 ARG A 153 REMARK 465 SER A 154 REMARK 465 GLY A 155 REMARK 465 ARG A 156 REMARK 465 ASN A 157 REMARK 465 ILE A 158 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 321 O HOH A 709 1.47 REMARK 500 HH TYR A 243 O HOH A 713 1.59 REMARK 500 OE2 GLU A 315 HH22 ARG A 514 1.59 REMARK 500 HE22 GLN A 454 O HOH A 711 1.59 REMARK 500 O HOH A 735 O HOH A 911 2.01 REMARK 500 O HOH A 711 O HOH A 1283 2.01 REMARK 500 O7 NAG B 2 O HOH A 701 2.04 REMARK 500 O1 MYR A 611 O HOH A 702 2.04 REMARK 500 O HOH A 789 O HOH A 1170 2.10 REMARK 500 O HOH A 1054 O HOH A 1284 2.10 REMARK 500 OE1 GLN A 397 O HOH A 703 2.10 REMARK 500 O HOH A 859 O HOH A 994 2.11 REMARK 500 O HOH A 1140 O HOH A 1207 2.11 REMARK 500 O HOH A 864 O HOH A 1106 2.11 REMARK 500 OE2 GLU A 474 O HOH A 704 2.14 REMARK 500 O HOH A 850 O HOH A 1249 2.15 REMARK 500 O HOH A 952 O HOH A 1236 2.16 REMARK 500 O HOH A 836 O HOH A 1275 2.16 REMARK 500 O HOH A 1104 O HOH A 1108 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 874 O HOH A 1079 1454 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 163 -52.26 74.37 REMARK 500 ASP A 183 80.21 -170.96 REMARK 500 THR A 194 -166.44 -103.50 REMARK 500 CYS A 229 17.88 59.21 REMARK 500 ASP A 261 -161.56 -112.93 REMARK 500 CYS A 458 85.44 -152.02 REMARK 500 PHE A 528 -52.86 -140.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1340 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A1341 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A1342 DISTANCE = 6.29 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 183 OD1 REMARK 620 2 ASP A 185 OD1 80.1 REMARK 620 3 ASP A 187 OD1 92.6 80.1 REMARK 620 4 HIS A 189 O 89.2 164.6 89.5 REMARK 620 5 ASP A 204 OD2 177.1 98.1 84.8 92.1 REMARK 620 6 ASP A 207 OD1 93.8 88.2 165.4 103.7 88.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 185 OD2 REMARK 620 2 ASP A 187 OD2 87.3 REMARK 620 3 ASP A 204 OD1 128.4 107.8 REMARK 620 4 ASP A 204 OD2 85.0 81.5 51.0 REMARK 620 5 ASN A 206 O 80.1 164.5 74.0 88.5 REMARK 620 6 ASP A 209 O 73.4 98.1 145.9 158.4 86.9 REMARK 620 7 VAL A 212 O 153.6 85.0 77.9 118.6 110.2 82.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 222 OD2 REMARK 620 2 ASP A 226 OD2 90.9 REMARK 620 3 ASN A 228 OD1 85.1 85.6 REMARK 620 4 ASN A 230 OD1 162.4 85.3 77.5 REMARK 620 5 ILE A 232 O 101.7 89.3 171.6 95.5 REMARK 620 6 GLU A 244 OE2 96.1 171.2 100.3 89.6 84.1 REMARK 620 N 1 2 3 4 5 DBREF 5W7D A 23 574 UNP O35298 AOAH_MOUSE 23 574 SEQADV 5W7D ASP A 13 UNP O35298 EXPRESSION TAG SEQADV 5W7D ARG A 14 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 15 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 16 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 17 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 18 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 19 UNP O35298 EXPRESSION TAG SEQADV 5W7D HIS A 20 UNP O35298 EXPRESSION TAG SEQADV 5W7D LYS A 21 UNP O35298 EXPRESSION TAG SEQADV 5W7D LEU A 22 UNP O35298 EXPRESSION TAG SEQADV 5W7D ARG A 152 UNP O35298 PRO 152 CONFLICT SEQADV 5W7D VAL A 184 UNP O35298 ILE 184 CONFLICT SEQADV 5W7D ALA A 262 UNP O35298 SER 262 ENGINEERED MUTATION SEQRES 1 A 562 ASP ARG HIS HIS HIS HIS HIS HIS LYS LEU SER VAL PRO SEQRES 2 A 562 SER GLU ASP GLN PRO GLY ASP SER TYR SER HIS GLY GLN SEQRES 3 A 562 SER CYS LEU GLY CYS VAL VAL LEU VAL SER VAL ILE GLU SEQRES 4 A 562 GLN LEU ALA GLU VAL HIS ASN SER SER VAL GLN VAL ALA SEQRES 5 A 562 MET GLU ARG LEU CYS SER TYR LEU PRO GLU LYS LEU PHE SEQRES 6 A 562 LEU LYS THR ALA CYS TYR PHE LEU VAL GLN THR PHE GLY SEQRES 7 A 562 SER ASP ILE ILE LYS LEU LEU ASP GLU ALA MET LYS ALA SEQRES 8 A 562 ASP VAL VAL CYS TYR ALA LEU GLU PHE CYS LYS ARG GLY SEQRES 9 A 562 ALA VAL GLN PRO GLN CYS HIS LEU TYR PRO LEU PRO GLN SEQRES 10 A 562 GLU ALA TRP GLU SER ALA LEU GLU LYS ALA ARG GLN VAL SEQRES 11 A 562 LEU ARG ARG SER SER THR MET LYS TYR ARG ARG SER GLY SEQRES 12 A 562 ARG ASN ILE CYS SER LEU PRO PHE LEU THR LYS ILE CYS SEQRES 13 A 562 GLN LYS ILE GLU LEU SER ILE LYS LYS ALA VAL PRO PHE SEQRES 14 A 562 LYS ASP VAL ASP SER ASP LYS HIS SER VAL PHE PRO THR SEQRES 15 A 562 LEU ARG GLY TYR HIS TRP ARG GLY ARG ASP CYS ASN ASP SEQRES 16 A 562 SER ASP LYS THR VAL TYR PRO GLY ARG ARG PRO ASP ASN SEQRES 17 A 562 TRP ASP ILE HIS GLN ASP SER ASN CYS ASN GLY ILE TRP SEQRES 18 A 562 GLY ILE ASP PRO LYS ASP GLY ILE PRO TYR GLU LYS LYS SEQRES 19 A 562 PHE CYS GLU GLY SER GLN PRO ARG GLY ILE ILE LEU LEU SEQRES 20 A 562 GLY ASP ALA ALA GLY ALA HIS PHE HIS ILE PRO PRO GLU SEQRES 21 A 562 TRP LEU THR ALA SER GLN MET SER VAL ASN SER PHE LEU SEQRES 22 A 562 ASN LEU PRO SER ALA LEU THR ASP GLU LEU ASN TRP PRO SEQRES 23 A 562 GLN LEU SER GLY VAL THR GLY PHE LEU ASP SER THR SER SEQRES 24 A 562 GLY ILE GLU GLU LYS SER ILE TYR HIS ARG LEU ARG LYS SEQRES 25 A 562 ARG ASN HIS CYS ASN HIS ARG ASP TYR GLN SER ILE SER SEQRES 26 A 562 LYS ASN GLY ALA SER SER ARG ASN LEU LYS ASN PHE ILE SEQRES 27 A 562 GLU SER LEU SER ARG ASN GLN ALA SER ASP HIS PRO ALA SEQRES 28 A 562 ILE VAL LEU TYR ALA MET ILE GLY ASN ASP VAL CYS ASN SEQRES 29 A 562 SER LYS ALA ASP THR VAL PRO GLU MET THR THR PRO GLU SEQRES 30 A 562 GLN MET TYR ALA ASN VAL MET GLN THR LEU THR HIS LEU SEQRES 31 A 562 ASN SER HIS LEU PRO ASN GLY SER HIS VAL ILE LEU TYR SEQRES 32 A 562 GLY LEU PRO ASP GLY THR PHE LEU TRP ASP SER LEU HIS SEQRES 33 A 562 ASN ARG TYR HIS PRO LEU GLY GLN LEU ASN LYS ASP VAL SEQRES 34 A 562 THR TYR ALA GLN PHE PHE SER PHE LEU ARG CYS LEU GLN SEQRES 35 A 562 LEU ASN PRO CYS ASN GLY TRP MET SER SER ASN LYS THR SEQRES 36 A 562 LEU ARG THR LEU THR SER GLU ARG ALA GLU GLN LEU SER SEQRES 37 A 562 ASN THR LEU LYS LYS ILE ALA THR THR GLU THR PHE ALA SEQRES 38 A 562 ASN PHE ASP LEU PHE TYR VAL ASP PHE ALA PHE HIS GLU SEQRES 39 A 562 ILE ILE GLU ASP TRP GLN LYS ARG GLY GLY GLN PRO TRP SEQRES 40 A 562 GLN LEU ILE GLU PRO VAL ASP GLY PHE HIS PRO ASN GLU SEQRES 41 A 562 VAL ALA SER LEU LEU GLN ALA ASN ARG VAL TRP GLU LYS SEQRES 42 A 562 ILE GLN LEU GLN TRP PRO HIS VAL LEU GLY LYS GLU ASN SEQRES 43 A 562 PRO PHE ASN SER GLN ILE GLU GLU VAL PHE GLY ASP GLN SEQRES 44 A 562 GLY GLY HIS HET NAG B 1 27 HET NAG B 2 28 HET NAG C 1 27 HET NAG C 2 28 HET CA A 601 1 HET CA A 602 1 HET CA A 603 1 HET NAG A 606 28 HET GOL A 609 14 HET PX8 A 610 123 HET MYR A 611 43 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETNAM PX8 1,2-DISTEAROYL-SN-GLYCERO-3-PHOSPHATE HETNAM MYR MYRISTIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 4 CA 3(CA 2+) FORMUL 8 GOL C3 H8 O3 FORMUL 9 PX8 C39 H76 O8 P 1- FORMUL 10 MYR C14 H28 O2 FORMUL 11 HOH *642(H2 O) HELIX 1 AA1 SER A 35 ASN A 58 1 24 HELIX 2 AA2 SER A 60 LEU A 72 1 13 HELIX 3 AA3 GLU A 74 LEU A 76 5 3 HELIX 4 AA4 PHE A 77 ASP A 98 1 22 HELIX 5 AA5 LYS A 102 LEU A 110 1 9 HELIX 6 AA6 PRO A 128 SER A 146 1 19 HELIX 7 AA7 PHE A 163 LYS A 177 1 15 HELIX 8 AA8 ASP A 219 ILE A 223 5 5 HELIX 9 AA9 PRO A 242 GLU A 249 1 8 HELIX 10 AB1 PRO A 270 LEU A 274 5 5 HELIX 11 AB2 THR A 275 MET A 279 5 5 HELIX 12 AB3 SER A 280 LEU A 285 5 6 HELIX 13 AB4 ASN A 286 ASP A 293 1 8 HELIX 14 AB5 TRP A 297 SER A 301 5 5 HELIX 15 AB6 SER A 317 ASN A 326 1 10 HELIX 16 AB7 HIS A 327 HIS A 330 5 4 HELIX 17 AB8 ASN A 345 LEU A 353 5 9 HELIX 18 AB9 ASP A 380 MET A 385 1 6 HELIX 19 AC1 THR A 387 LEU A 406 1 20 HELIX 20 AC2 THR A 421 HIS A 428 1 8 HELIX 21 AC3 HIS A 432 GLN A 436 5 5 HELIX 22 AC4 THR A 442 LEU A 453 1 12 HELIX 23 AC5 ASN A 465 THR A 488 1 24 HELIX 24 AC6 ALA A 503 ARG A 514 1 12 HELIX 25 AC7 GLN A 517 ILE A 522 5 6 HELIX 26 AC8 ASN A 531 TRP A 550 1 20 HELIX 27 AC9 PRO A 551 GLY A 555 5 5 HELIX 28 AD1 PHE A 560 GLY A 569 1 10 SHEET 1 AA1 5 TYR A 333 SER A 337 0 SHEET 2 AA1 5 GLY A 255 GLY A 260 1 N LEU A 258 O ILE A 336 SHEET 3 AA1 5 ALA A 363 ALA A 368 1 O ILE A 364 N GLY A 255 SHEET 4 AA1 5 SER A 410 TYR A 415 1 O HIS A 411 N VAL A 365 SHEET 5 AA1 5 PHE A 495 VAL A 500 1 O PHE A 498 N LEU A 414 SSBOND 1 CYS A 40 CYS A 113 1555 1555 2.07 SSBOND 2 CYS A 43 CYS A 107 1555 1555 2.05 SSBOND 3 CYS A 69 CYS A 82 1555 1555 2.08 SSBOND 4 CYS A 122 CYS A 452 1555 1555 2.08 SSBOND 5 CYS A 159 CYS A 168 1555 1555 2.06 SSBOND 6 CYS A 205 CYS A 229 1555 1555 2.12 SSBOND 7 CYS A 248 CYS A 328 1555 1555 2.09 SSBOND 8 CYS A 375 CYS A 458 1555 1555 2.19 LINK ND2 ASN A 206 C1 NAG B 1 1555 1555 1.43 LINK ND2 ASN A 408 C1 NAG A 606 1555 1555 1.46 LINK ND2 ASN A 465 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK OD1 ASP A 183 CA CA A 601 1555 1555 2.29 LINK OD1 ASP A 185 CA CA A 601 1555 1555 2.37 LINK OD2 ASP A 185 CA CA A 602 1555 1555 2.35 LINK OD1 ASP A 187 CA CA A 601 1555 1555 2.35 LINK OD2 ASP A 187 CA CA A 602 1555 1555 2.29 LINK O HIS A 189 CA CA A 601 1555 1555 2.28 LINK OD2 ASP A 204 CA CA A 601 1555 1555 2.27 LINK OD1 ASP A 204 CA CA A 602 1555 1555 2.59 LINK OD2 ASP A 204 CA CA A 602 1555 1555 2.56 LINK O ASN A 206 CA CA A 602 1555 1555 2.34 LINK OD1 ASP A 207 CA CA A 601 1555 1555 2.33 LINK O ASP A 209 CA CA A 602 1555 1555 2.56 LINK O VAL A 212 CA CA A 602 1555 1555 2.34 LINK OD2 ASP A 222 CA CA A 603 1555 1555 2.30 LINK OD2 ASP A 226 CA CA A 603 1555 1555 2.32 LINK OD1 ASN A 228 CA CA A 603 1555 1555 2.37 LINK OD1 ASN A 230 CA CA A 603 1555 1555 2.40 LINK O ILE A 232 CA CA A 603 1555 1555 2.30 LINK OE2 GLU A 244 CA CA A 603 1555 1555 2.23 CRYST1 46.527 98.590 73.488 90.00 99.68 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021493 0.000000 0.003668 0.00000 SCALE2 0.000000 0.010143 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013804 0.00000