HEADER TRANSFERASE 20-JUN-17 5W7P TITLE CRYSTAL STRUCTURE OF OXAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXAC; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PENICILLIUM OXALICUM; SOURCE 3 ORGANISM_TAXID: 69781; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, PENICILLIUM OXALICUM, OXALINE, INDOLE ALKALOID, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.NEWMISTER,S.ROMMINGER,J.J.SCHMIDT,R.M.WILLIAMS,J.L.SMITH, AUTHOR 2 R.G.S.BERLINCK,D.H.SHERMAN REVDAT 6 13-MAR-24 5W7P 1 REMARK REVDAT 5 27-NOV-19 5W7P 1 REMARK REVDAT 4 17-APR-19 5W7P 1 REMARK REVDAT 3 26-SEP-18 5W7P 1 JRNL REVDAT 2 05-SEP-18 5W7P 1 JRNL REVDAT 1 27-JUN-18 5W7P 0 JRNL AUTH S.A.NEWMISTER,S.ROMMINGER,J.J.SCHMIDT,R.M.WILLIAMS, JRNL AUTH 2 J.L.SMITH,R.G.S.BERLINCK,D.H.SHERMAN JRNL TITL UNVEILING SEQUENTIAL LATE-STAGE METHYLTRANSFERASE REACTIONS JRNL TITL 2 IN THE MELEAGRIN/OXALINE BIOSYNTHETIC PATHWAY. JRNL REF ORG. BIOMOL. CHEM. V. 16 6450 2018 JRNL REFN ESSN 1477-0539 JRNL PMID 30141817 JRNL DOI 10.1039/C8OB01565A REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 24187 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1213 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.4012 - 4.9894 1.00 2739 110 0.1797 0.1865 REMARK 3 2 4.9894 - 3.9614 1.00 2576 142 0.1672 0.2096 REMARK 3 3 3.9614 - 3.4609 1.00 2553 143 0.1975 0.2592 REMARK 3 4 3.4609 - 3.1446 1.00 2569 109 0.2148 0.2960 REMARK 3 5 3.1446 - 2.9193 1.00 2518 143 0.2281 0.2914 REMARK 3 6 2.9193 - 2.7472 1.00 2510 134 0.2222 0.2651 REMARK 3 7 2.7472 - 2.6097 1.00 2516 149 0.2076 0.2570 REMARK 3 8 2.6097 - 2.4961 1.00 2499 144 0.2485 0.2540 REMARK 3 9 2.4961 - 2.4000 1.00 2494 139 0.3120 0.3662 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 65.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 82.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3133 REMARK 3 ANGLE : 0.971 4251 REMARK 3 CHIRALITY : 0.058 477 REMARK 3 PLANARITY : 0.006 554 REMARK 3 DIHEDRAL : 5.807 1887 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 20.6622 131.3332 30.2509 REMARK 3 T TENSOR REMARK 3 T11: 0.3957 T22: 0.7065 REMARK 3 T33: 0.4950 T12: 0.1152 REMARK 3 T13: 0.0306 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 1.8440 L22: 1.1260 REMARK 3 L33: 1.9634 L12: -0.0232 REMARK 3 L13: -0.5029 L23: 0.2241 REMARK 3 S TENSOR REMARK 3 S11: 0.0954 S12: 0.7466 S13: -0.0689 REMARK 3 S21: -0.1554 S22: -0.0053 S23: 0.1702 REMARK 3 S31: -0.0458 S32: -0.4597 S33: -0.0911 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W7P COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228562. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24188 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.396 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.50 REMARK 200 R MERGE (I) : 0.08050 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.2800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, AMMONIUM SULFATE, REMARK 280 SODIUM CITRATE, PH 7.6, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 81.12200 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 45.84300 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 81.12200 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 45.84300 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 81.12200 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 45.84300 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 81.12200 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 45.84300 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 81.12200 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 45.84300 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 81.12200 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 45.84300 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 81.12200 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 45.84300 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 81.12200 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 81.12200 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 45.84300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -85.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 162.24400 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 162.24400 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 91.68600 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -23 REMARK 465 GLY A -22 REMARK 465 SER A -21 REMARK 465 SER A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 GLY A -11 REMARK 465 ALA A -10 REMARK 465 SER A -9 REMARK 465 GLU A -8 REMARK 465 ASN A -7 REMARK 465 LEU A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 GLY A -2 REMARK 465 ALA A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PHE A 3 REMARK 465 SER A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 ASP A 7 REMARK 465 ASN A 33 REMARK 465 ALA A 34 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 ARG A 334 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 392 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 628 O HOH A 628 5556 1.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 217 80.52 50.87 REMARK 500 SER A 245 -129.88 50.60 REMARK 500 ALA A 257 75.98 -151.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAM A 501 DBREF1 5W7P A 1 405 UNP A0A1B2TT09_PENOX DBREF2 5W7P A A0A1B2TT09 1 405 SEQADV 5W7P MET A -23 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P GLY A -22 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P SER A -21 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P SER A -20 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -19 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -18 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -17 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -16 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -15 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -14 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -13 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P HIS A -12 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P GLY A -11 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P ALA A -10 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P SER A -9 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P GLU A -8 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P ASN A -7 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P LEU A -6 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P TYR A -5 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P PHE A -4 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P GLN A -3 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P GLY A -2 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P ALA A -1 UNP A0A1B2TT0 EXPRESSION TAG SEQADV 5W7P SER A 0 UNP A0A1B2TT0 EXPRESSION TAG SEQRES 1 A 429 MET GLY SER SER HIS HIS HIS HIS HIS HIS HIS HIS GLY SEQRES 2 A 429 ALA SER GLU ASN LEU TYR PHE GLN GLY ALA SER MET THR SEQRES 3 A 429 PHE SER ASN ALA ASP ALA GLN LYS ILE ALA VAL GLN LYS SEQRES 4 A 429 ASP VAL ASP GLU VAL VAL ALA ALA ALA GLN ARG PHE LEU SEQRES 5 A 429 HIS GLY SER GLY ASN ALA THR SER ASP GLU ALA LYS VAL SEQRES 6 A 429 ASP LEU GLN LYS LYS ALA SER ASN LEU VAL GLN THR ILE SEQRES 7 A 429 ARG GLY PRO ILE PRO ALA ALA LEU SER SER MET GLU ASP SEQRES 8 A 429 ILE VAL LYS VAL ALA SER LEU ARG THR LEU PHE GLU ALA SEQRES 9 A 429 GLY VAL PHE HIS ALA MET PRO LYS GLY GLY ALA SER MET SEQRES 10 A 429 THR ALA SER GLU ILE SER ALA GLN THR GLY LEU ASP LYS SEQRES 11 A 429 GLY ILE LEU ILE ARG LEU MET ARG ALA VAL THR PRO LEU SEQRES 12 A 429 GLY PRO PHE HIS GLU VAL GLY GLU GLU GLU TYR ALA HIS SEQRES 13 A 429 THR PRO PHE SER GLU ALA TYR LEU THR ALA ASP ILE ALA SEQRES 14 A 429 GLY CYS PHE PRO VAL MET SER ASN PHE ILE PHE GLY PRO SEQRES 15 A 429 VAL LEU GLN ILE CYS ASP PHE LEU ARG GLN ASN ASN TRP SEQRES 16 A 429 LYS ASP ALA ILE THR THR ARG ASN ASN PRO PHE THR LEU SEQRES 17 A 429 ALA HIS ASN CYS PRO GLY GLU THR MET PHE GLU HIS LEU SEQRES 18 A 429 TYR LYS ASN SER LYS ASN VAL ALA PRO VAL THR LYS ALA SEQRES 19 A 429 GLU ALA ALA ASP VAL ASP GLN ILE ALA MET ASP LEU TYR SEQRES 20 A 429 PRO TRP GLU GLU ARG LEU SER ASP ALA LYS GLY SER ASN SEQRES 21 A 429 ALA THR LEU VAL ASP ILE ALA GLY SER HIS GLY ASN GLY SEQRES 22 A 429 THR ARG ALA ILE MET ALA LEU ALA PRO LYS LEU ASN GLY SEQRES 23 A 429 CYS ARG PHE ILE VAL GLN ASP LEU GLU PRO VAL ILE GLY SEQRES 24 A 429 GLU HIS SER GLN ALA LEU ARG ALA GLU GLY ILE GLU PRO SEQRES 25 A 429 GLN VAL TYR ASP PHE LEU LYS GLN GLU GLN PRO VAL HIS SEQRES 26 A 429 GLY ALA SER ILE TYR TYR PHE ARG ARG VAL PHE HIS ASP SEQRES 27 A 429 TRP PRO ASP LEU PRO GLU GLY LYS LYS ILE LEU ASP ASN SEQRES 28 A 429 THR ARG ALA ALA MET SER ARG GLU HIS SER ARG ILE LEU SEQRES 29 A 429 ILE HIS ASP ILE ILE VAL PRO GLU ILE GLY ALA THR MET SEQRES 30 A 429 SER HIS ALA TRP GLN ASP LEU SER LEU MET ALA ILE GLY SEQRES 31 A 429 GLY MET GLU ARG THR GLU LYS ASP PHE ALA ARG LEU LEU SEQRES 32 A 429 ASP ILE ALA GLY LEU ALA LEU VAL LYS VAL TRP ARG LYS SEQRES 33 A 429 PRO GLY ASP MET MET GLY ILE ILE GLU ALA ARG LEU LYS HET SAM A 501 27 HETNAM SAM S-ADENOSYLMETHIONINE FORMUL 2 SAM C15 H22 N6 O5 S FORMUL 3 HOH *35(H2 O) HELIX 1 AA1 ALA A 8 LEU A 28 1 21 HELIX 2 AA2 SER A 36 GLY A 56 1 21 HELIX 3 AA3 GLY A 56 ALA A 61 1 6 HELIX 4 AA4 LEU A 62 ALA A 80 1 19 HELIX 5 AA5 GLY A 81 MET A 86 1 6 HELIX 6 AA6 ALA A 95 GLY A 103 1 9 HELIX 7 AA7 ASP A 105 ARG A 114 1 10 HELIX 8 AA8 THR A 133 ALA A 138 1 6 HELIX 9 AA9 THR A 141 ILE A 155 1 15 HELIX 10 AB1 ILE A 155 GLN A 161 1 7 HELIX 11 AB2 GLN A 161 GLN A 168 1 8 HELIX 12 AB3 ASN A 180 ASN A 187 1 8 HELIX 13 AB4 THR A 192 ASN A 200 1 9 HELIX 14 AB5 ASN A 203 ALA A 213 1 11 HELIX 15 AB6 PRO A 224 ASP A 231 1 8 HELIX 16 AB7 LYS A 233 ASN A 236 5 4 HELIX 17 AB8 GLY A 247 ALA A 255 1 9 HELIX 18 AB9 LEU A 270 GLU A 284 1 15 HELIX 19 AC1 VAL A 311 TRP A 315 5 5 HELIX 20 AC2 PRO A 319 ALA A 330 1 12 HELIX 21 AC3 THR A 352 ALA A 364 1 13 HELIX 22 AC4 GLU A 372 ALA A 382 1 11 SHEET 1 AA1 3 SER A 92 THR A 94 0 SHEET 2 AA1 3 GLU A 129 ALA A 131 -1 O TYR A 130 N MET A 93 SHEET 3 AA1 3 HIS A 123 GLY A 126 -1 N HIS A 123 O ALA A 131 SHEET 1 AA2 6 GLU A 287 VAL A 290 0 SHEET 2 AA2 6 ARG A 264 ASP A 269 1 N VAL A 267 O GLN A 289 SHEET 3 AA2 6 THR A 238 ILE A 242 1 N ASP A 241 O ILE A 266 SHEET 4 AA2 6 ILE A 305 ARG A 309 1 O TYR A 307 N VAL A 240 SHEET 5 AA2 6 ARG A 338 VAL A 346 1 O HIS A 342 N PHE A 308 SHEET 6 AA2 6 ARG A 370 THR A 371 1 O ARG A 370 N VAL A 346 SHEET 1 AA3 7 GLU A 287 VAL A 290 0 SHEET 2 AA3 7 ARG A 264 ASP A 269 1 N VAL A 267 O GLN A 289 SHEET 3 AA3 7 THR A 238 ILE A 242 1 N ASP A 241 O ILE A 266 SHEET 4 AA3 7 ILE A 305 ARG A 309 1 O TYR A 307 N VAL A 240 SHEET 5 AA3 7 ARG A 338 VAL A 346 1 O HIS A 342 N PHE A 308 SHEET 6 AA3 7 MET A 397 LEU A 404 -1 O ILE A 400 N ILE A 341 SHEET 7 AA3 7 LEU A 384 TRP A 390 -1 N VAL A 387 O GLU A 401 CISPEP 1 LEU A 318 PRO A 319 0 4.97 SITE 1 AC1 16 PHE A 194 TYR A 198 GLU A 211 ALA A 243 SITE 2 AC1 16 SER A 245 HIS A 246 ASP A 269 LEU A 270 SITE 3 AC1 16 VAL A 273 TYR A 291 ASP A 292 PHE A 293 SITE 4 AC1 16 ARG A 309 ARG A 310 TRP A 315 HOH A 607 CRYST1 162.244 162.244 91.686 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006164 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006164 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010907 0.00000