HEADER TRANSCRIPTION 23-JUN-17 5W9D
TITLE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN C381S, C417S, C530S
TITLE 2 MUTANT IN COMPLEX WITH ENDOXIFEN
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ESTROGEN RECEPTOR;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3
COMPND 5 GROUP A MEMBER 1;
COMPND 6 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: ESR1, ESR, NR3A1;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS BREAST CANCER, SELECTIVE ESTROGEN RECEPTOR MODULATOR, TRANSCRIPTION
EXPDTA X-RAY DIFFRACTION
AUTHOR S.W.FANNING,G.L.GREENE
REVDAT 4 04-OCT-23 5W9D 1 REMARK
REVDAT 3 04-JUL-18 5W9D 1 JRNL
REVDAT 2 13-JUN-18 5W9D 1 JRNL
REVDAT 1 11-OCT-17 5W9D 0
JRNL AUTH P.Y.MAXIMOV,B.ABDERRAHMAN,S.W.FANNING,S.SENGUPTA,P.FAN,
JRNL AUTH 2 R.F.CURPAN,D.M.Q.RINCON,J.A.GREENLAND,S.S.RAJAN,G.L.GREENE,
JRNL AUTH 3 V.C.JORDAN
JRNL TITL ENDOXIFEN, 4-HYDROXYTAMOXIFEN AND AN ESTROGENIC DERIVATIVE
JRNL TITL 2 MODULATE ESTROGEN RECEPTOR COMPLEX MEDIATED APOPTOSIS IN
JRNL TITL 3 BREAST CANCER.
JRNL REF MOL. PHARMACOL. V. 94 812 2018
JRNL REFN ESSN 1521-0111
JRNL PMID 29739819
JRNL DOI 10.1124/MOL.117.111385
REMARK 2
REMARK 2 RESOLUTION. 1.65 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : PHENIX 1.9_1692
REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN
REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,
REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,
REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,
REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON,
REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,
REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT
REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART
REMARK 3
REMARK 3 REFINEMENT TARGET : ML
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.62
REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410
REMARK 3 COMPLETENESS FOR RANGE (%) : 90.0
REMARK 3 NUMBER OF REFLECTIONS : 56989
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 R VALUE (WORKING + TEST SET) : 0.169
REMARK 3 R VALUE (WORKING SET) : 0.168
REMARK 3 FREE R VALUE : 0.195
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 2850
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS).
REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE
REMARK 3 1 19.6161 - 4.4524 0.88 2667 122 0.1868 0.2346
REMARK 3 2 4.4524 - 3.5408 0.90 2728 147 0.1474 0.1408
REMARK 3 3 3.5408 - 3.0952 0.93 2806 139 0.1587 0.1951
REMARK 3 4 3.0952 - 2.8131 0.93 2836 134 0.1592 0.1800
REMARK 3 5 2.8131 - 2.6120 0.94 2789 158 0.1639 0.1979
REMARK 3 6 2.6120 - 2.4583 0.93 2818 132 0.1610 0.1589
REMARK 3 7 2.4583 - 2.3354 0.94 2776 176 0.1609 0.2037
REMARK 3 8 2.3354 - 2.2339 0.94 2796 149 0.1589 0.1624
REMARK 3 9 2.2339 - 2.1480 0.92 2753 177 0.1597 0.2050
REMARK 3 10 2.1480 - 2.0739 0.92 2764 124 0.1542 0.2031
REMARK 3 11 2.0739 - 2.0091 0.91 2752 156 0.1715 0.2256
REMARK 3 12 2.0091 - 1.9518 0.89 2690 137 0.1720 0.1996
REMARK 3 13 1.9518 - 1.9004 0.90 2696 149 0.1765 0.1984
REMARK 3 14 1.9004 - 1.8541 0.89 2668 149 0.1750 0.2428
REMARK 3 15 1.8541 - 1.8120 0.89 2651 145 0.1817 0.1985
REMARK 3 16 1.8120 - 1.7734 0.88 2695 143 0.1807 0.2255
REMARK 3 17 1.7734 - 1.7380 0.88 2644 133 0.1907 0.2091
REMARK 3 18 1.7380 - 1.7052 0.88 2605 107 0.1955 0.2617
REMARK 3 19 1.7052 - 1.6748 0.85 2586 153 0.2084 0.2631
REMARK 3 20 1.6748 - 1.6464 0.81 2419 120 0.2309 0.2836
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL
REMARK 3 SOLVENT RADIUS : 1.11
REMARK 3 SHRINKAGE RADIUS : 0.90
REMARK 3 K_SOL : NULL
REMARK 3 B_SOL : NULL
REMARK 3
REMARK 3 ERROR ESTIMATES.
REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160
REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.840
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : NULL
REMARK 3 B22 (A**2) : NULL
REMARK 3 B33 (A**2) : NULL
REMARK 3 B12 (A**2) : NULL
REMARK 3 B13 (A**2) : NULL
REMARK 3 B23 (A**2) : NULL
REMARK 3
REMARK 3 TWINNING INFORMATION.
REMARK 3 FRACTION: NULL
REMARK 3 OPERATOR: NULL
REMARK 3
REMARK 3 DEVIATIONS FROM IDEAL VALUES.
REMARK 3 RMSD COUNT
REMARK 3 BOND : 0.018 4095
REMARK 3 ANGLE : 1.757 5564
REMARK 3 CHIRALITY : 0.096 652
REMARK 3 PLANARITY : 0.011 697
REMARK 3 DIHEDRAL : 14.296 1524
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 10
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 340 )
REMARK 3 ORIGIN FOR THE GROUP (A): 8.5683 12.4413 -18.7879
REMARK 3 T TENSOR
REMARK 3 T11: 0.1523 T22: 0.0890
REMARK 3 T33: 0.1594 T12: 0.0278
REMARK 3 T13: 0.0606 T23: -0.0043
REMARK 3 L TENSOR
REMARK 3 L11: 7.5945 L22: 1.8709
REMARK 3 L33: 2.2672 L12: 0.9518
REMARK 3 L13: 1.4790 L23: 0.3133
REMARK 3 S TENSOR
REMARK 3 S11: -0.2019 S12: 0.0910 S13: -0.3658
REMARK 3 S21: -0.0393 S22: 0.0471 S23: 0.0210
REMARK 3 S31: 0.2555 S32: 0.2163 S33: 0.1058
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 437 )
REMARK 3 ORIGIN FOR THE GROUP (A): 11.2314 23.0439 -15.3642
REMARK 3 T TENSOR
REMARK 3 T11: 0.0856 T22: 0.0860
REMARK 3 T33: 0.0976 T12: 0.0221
REMARK 3 T13: -0.0016 T23: 0.0111
REMARK 3 L TENSOR
REMARK 3 L11: 2.0690 L22: 1.3574
REMARK 3 L33: 2.1271 L12: -0.5264
REMARK 3 L13: -0.0381 L23: 0.0209
REMARK 3 S TENSOR
REMARK 3 S11: -0.0707 S12: -0.1623 S13: -0.0917
REMARK 3 S21: 0.1889 S22: 0.0459 S23: -0.0907
REMARK 3 S31: 0.0758 S32: 0.0862 S33: 0.0194
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 496 )
REMARK 3 ORIGIN FOR THE GROUP (A): -4.4400 22.3835 -25.8811
REMARK 3 T TENSOR
REMARK 3 T11: 0.0745 T22: 0.0704
REMARK 3 T33: 0.1157 T12: -0.0099
REMARK 3 T13: 0.0046 T23: -0.0414
REMARK 3 L TENSOR
REMARK 3 L11: 2.1124 L22: 1.2675
REMARK 3 L33: 3.2211 L12: 0.2403
REMARK 3 L13: -0.2943 L23: 0.1331
REMARK 3 S TENSOR
REMARK 3 S11: -0.0062 S12: 0.2016 S13: -0.1175
REMARK 3 S21: -0.1431 S22: -0.0500 S23: 0.0919
REMARK 3 S31: 0.0136 S32: 0.0143 S33: 0.0094
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 549 )
REMARK 3 ORIGIN FOR THE GROUP (A): 7.7536 27.4329 -21.8029
REMARK 3 T TENSOR
REMARK 3 T11: 0.0837 T22: 0.1653
REMARK 3 T33: 0.0731 T12: 0.0188
REMARK 3 T13: 0.0138 T23: -0.0332
REMARK 3 L TENSOR
REMARK 3 L11: 1.0164 L22: 1.2032
REMARK 3 L33: 0.9893 L12: -0.0239
REMARK 3 L13: 0.5853 L23: 0.1643
REMARK 3 S TENSOR
REMARK 3 S11: 0.0045 S12: 0.5239 S13: 0.0065
REMARK 3 S21: -0.0621 S22: 0.0622 S23: -0.0985
REMARK 3 S31: 0.0807 S32: 0.1612 S33: -0.0402
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 307 THROUGH 341 )
REMARK 3 ORIGIN FOR THE GROUP (A): -11.6757 53.0410 -20.3746
REMARK 3 T TENSOR
REMARK 3 T11: 0.1421 T22: 0.1327
REMARK 3 T33: 0.1664 T12: 0.0426
REMARK 3 T13: -0.0442 T23: -0.0437
REMARK 3 L TENSOR
REMARK 3 L11: 4.0797 L22: 4.5407
REMARK 3 L33: 2.2418 L12: 2.5951
REMARK 3 L13: -0.5229 L23: -0.4764
REMARK 3 S TENSOR
REMARK 3 S11: -0.0182 S12: -0.0141 S13: 0.4146
REMARK 3 S21: -0.1007 S22: -0.0464 S23: 0.3792
REMARK 3 S31: -0.3564 S32: 0.0043 S33: 0.0708
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 437 )
REMARK 3 ORIGIN FOR THE GROUP (A): -3.5590 48.3131 -21.3328
REMARK 3 T TENSOR
REMARK 3 T11: 0.1171 T22: 0.0731
REMARK 3 T33: 0.0880 T12: 0.0135
REMARK 3 T13: 0.0025 T23: 0.0079
REMARK 3 L TENSOR
REMARK 3 L11: 1.1506 L22: 2.1848
REMARK 3 L33: 1.9999 L12: 0.1419
REMARK 3 L13: 0.0968 L23: -0.0599
REMARK 3 S TENSOR
REMARK 3 S11: 0.0198 S12: 0.1329 S13: 0.1380
REMARK 3 S21: -0.2029 S22: -0.0584 S23: 0.0343
REMARK 3 S31: -0.1219 S32: -0.0160 S33: 0.0182
REMARK 3 TLS GROUP : 7
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 465 )
REMARK 3 ORIGIN FOR THE GROUP (A): -8.6145 37.9823 -14.0139
REMARK 3 T TENSOR
REMARK 3 T11: 0.0520 T22: 0.0530
REMARK 3 T33: 0.1092 T12: -0.0030
REMARK 3 T13: 0.0178 T23: -0.0201
REMARK 3 L TENSOR
REMARK 3 L11: 2.2141 L22: 2.7025
REMARK 3 L33: 6.5861 L12: 0.3472
REMARK 3 L13: 0.4008 L23: -0.2095
REMARK 3 S TENSOR
REMARK 3 S11: -0.0220 S12: -0.1264 S13: 0.0135
REMARK 3 S21: 0.1162 S22: -0.0136 S23: -0.0140
REMARK 3 S31: 0.0147 S32: 0.2218 S33: -0.0231
REMARK 3 TLS GROUP : 8
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 466 THROUGH 496 )
REMARK 3 ORIGIN FOR THE GROUP (A): -15.1312 32.5927 -9.5188
REMARK 3 T TENSOR
REMARK 3 T11: 0.0407 T22: 0.1340
REMARK 3 T33: 0.1683 T12: -0.0223
REMARK 3 T13: 0.0852 T23: -0.0265
REMARK 3 L TENSOR
REMARK 3 L11: 1.7537 L22: 1.9540
REMARK 3 L33: 2.9742 L12: 0.5663
REMARK 3 L13: 1.2208 L23: 0.6936
REMARK 3 S TENSOR
REMARK 3 S11: -0.0093 S12: -0.1119 S13: -0.1225
REMARK 3 S21: 0.5137 S22: 0.0165 S23: 0.3297
REMARK 3 S31: -0.0118 S32: -0.2222 S33: -0.0416
REMARK 3 TLS GROUP : 9
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 528 )
REMARK 3 ORIGIN FOR THE GROUP (A): -2.6101 36.1603 -21.7953
REMARK 3 T TENSOR
REMARK 3 T11: 0.0594 T22: 0.0585
REMARK 3 T33: 0.0444 T12: 0.0274
REMARK 3 T13: 0.0100 T23: -0.0044
REMARK 3 L TENSOR
REMARK 3 L11: 7.4613 L22: 5.7544
REMARK 3 L33: 0.9770 L12: 5.5122
REMARK 3 L13: 1.1623 L23: 1.1314
REMARK 3 S TENSOR
REMARK 3 S11: -0.0626 S12: 0.1183 S13: -0.0123
REMARK 3 S21: -0.1009 S22: 0.0207 S23: 0.0350
REMARK 3 S31: -0.0055 S32: -0.0276 S33: 0.0200
REMARK 3 TLS GROUP : 10
REMARK 3 SELECTION: CHAIN 'B' AND (RESID 529 THROUGH 545 )
REMARK 3 ORIGIN FOR THE GROUP (A): 3.6457 54.0667 -6.8672
REMARK 3 T TENSOR
REMARK 3 T11: 0.4325 T22: 0.3182
REMARK 3 T33: 0.1545 T12: -0.1569
REMARK 3 T13: 0.0874 T23: -0.1058
REMARK 3 L TENSOR
REMARK 3 L11: 2.3541 L22: 1.8286
REMARK 3 L33: 3.4679 L12: -0.4233
REMARK 3 L13: -2.4552 L23: -0.4465
REMARK 3 S TENSOR
REMARK 3 S11: 0.2817 S12: -0.6998 S13: 0.2711
REMARK 3 S21: 0.9106 S22: -0.1698 S23: -0.2502
REMARK 3 S31: -0.1752 S32: 0.3408 S33: -0.1800
REMARK 3
REMARK 3 NCS DETAILS
REMARK 3 NUMBER OF NCS GROUPS : NULL
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5W9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-17.
REMARK 100 THE DEPOSITION ID IS D_1000228643.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 16-APR-16
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 19-BM
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : IMAGE PLATE
REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000
REMARK 200 DATA SCALING SOFTWARE : HKL-3000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56989
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.646
REMARK 200 RESOLUTION RANGE LOW (A) : 19.615
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0
REMARK 200 DATA REDUNDANCY : 3.700
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 2.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHENIX
REMARK 200 STARTING MODEL: 5ACC
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 48.10
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8,000, MAGNESIUM CHLORIDE, TRIS PH
REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 -X,-Y,Z+1/2
REMARK 290 5555 Y,-X+Y,Z+1/6
REMARK 290 6555 X-Y,X,Z+5/6
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 184.66733
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.33367
REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.50050
REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.16683
REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 230.83417
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 20780 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 LEU A 306
REMARK 465 PHE A 337
REMARK 465 SER A 338
REMARK 465 ALA A 551
REMARK 465 PRO A 552
REMARK 465 THR A 553
REMARK 465 SER A 554
REMARK 465 LEU B 306
REMARK 465 GLU B 339
REMARK 465 ALA B 340
REMARK 465 ALA B 546
REMARK 465 HIS B 547
REMARK 465 ARG B 548
REMARK 465 LEU B 549
REMARK 465 HIS B 550
REMARK 465 ALA B 551
REMARK 465 PRO B 552
REMARK 465 THR B 553
REMARK 465 SER B 554
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 TYR A 331 CG CD1 CD2 CE1 CE2 CZ OH
REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2
REMARK 470 GLU A 339 CG CD OE1 OE2
REMARK 470 ARG A 477 CZ NH1 NH2
REMARK 470 ASN A 532 CG OD1 ND2
REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2
REMARK 470 GLU B 397 CD OE1 OE2
REMARK 470 LYS B 416 CG CD CE NZ
REMARK 470 LEU B 462 CG CD1 CD2
REMARK 470 SER B 463 OG
REMARK 470 ARG B 477 CZ NH1 NH2
REMARK 470 ASN B 532 CG OD1 ND2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT
REMARK 500
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE
REMARK 500 O HOH A 811 O HOH A 860 1.70
REMARK 500 O ALA A 307 O HOH A 701 1.73
REMARK 500 O HOH A 710 O HOH A 891 1.80
REMARK 500 O HOH A 771 O HOH A 976 1.83
REMARK 500 O HOH A 1003 O HOH A 1014 1.85
REMARK 500 O HOH B 799 O HOH B 945 1.87
REMARK 500 O HOH B 708 O HOH B 863 1.88
REMARK 500 O HOH B 930 O HOH B 990 1.89
REMARK 500 O HOH A 837 O HOH A 931 1.92
REMARK 500 O HOH B 961 O HOH B 991 1.94
REMARK 500 O HOH B 730 O HOH B 817 1.95
REMARK 500 O HOH B 729 O HOH B 885 1.96
REMARK 500 O HOH A 985 O HOH A 1017 1.96
REMARK 500 OE1 GLU B 523 O HOH B 701 1.97
REMARK 500 O GLU B 542 O HOH B 702 1.97
REMARK 500 O HOH A 740 O HOH A 915 1.97
REMARK 500 O HOH A 719 O HOH B 824 1.99
REMARK 500 O HOH B 961 O HOH B 988 1.99
REMARK 500 O HOH A 1000 O HOH A 1016 2.00
REMARK 500 O HOH A 705 O HOH A 800 2.00
REMARK 500 O HOH B 709 O HOH B 733 2.00
REMARK 500 O HOH B 822 O HOH B 918 2.01
REMARK 500 O HOH A 930 O HOH A 977 2.01
REMARK 500 O HOH A 809 O HOH A 970 2.01
REMARK 500 O HOH A 775 O HOH A 830 2.02
REMARK 500 O HOH B 888 O HOH B 936 2.03
REMARK 500 NE ARG B 477 O HOH B 703 2.03
REMARK 500 O HOH B 862 O HOH B 897 2.03
REMARK 500 O HOH B 749 O HOH B 867 2.04
REMARK 500 O HOH A 997 O HOH A 1019 2.04
REMARK 500 O HOH A 792 O HOH A 989 2.05
REMARK 500 O HOH A 736 O HOH A 767 2.06
REMARK 500 O HOH A 965 O HOH A 997 2.06
REMARK 500 O HOH B 936 O HOH B 942 2.09
REMARK 500 O HOH B 956 O HOH B 992 2.09
REMARK 500 O HOH A 725 O HOH A 913 2.10
REMARK 500 O HOH A 709 O HOH A 864 2.10
REMARK 500 O HOH A 968 O HOH B 885 2.11
REMARK 500 O HOH B 768 O HOH B 780 2.12
REMARK 500 NE ARG A 477 O HOH A 702 2.13
REMARK 500 O HOH A 705 O HOH A 785 2.13
REMARK 500 NZ LYS A 472 O HOH A 703 2.14
REMARK 500 O HOH B 907 O HOH B 948 2.14
REMARK 500 O HOH B 840 O HOH B 885 2.14
REMARK 500 O HOH B 815 O HOH B 903 2.15
REMARK 500 O PRO B 336 O HOH B 704 2.16
REMARK 500 O HOH A 971 O HOH A 1001 2.16
REMARK 500 O HOH A 954 O HOH A 1013 2.16
REMARK 500 NE ARG A 548 O HOH A 704 2.17
REMARK 500 O HOH A 907 O HOH B 965 2.18
REMARK 500
REMARK 500 THIS ENTRY HAS 53 CLOSE CONTACTS
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: CLOSE CONTACTS
REMARK 500
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375
REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.
REMARK 500
REMARK 500 DISTANCE CUTOFF:
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS
REMARK 500
REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE
REMARK 500 O HOH A 940 O HOH B 714 1445 1.83
REMARK 500 O HOH A 1010 O HOH B 979 6654 1.98
REMARK 500 O HOH B 774 O HOH B 884 5455 1.98
REMARK 500 O HOH A 862 O HOH A 948 5555 2.01
REMARK 500 O HOH A 982 O HOH B 955 6654 2.02
REMARK 500 O HOH A 870 O HOH B 919 1545 2.12
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ARG B 436 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 LEU A 408 75.15 -150.24
REMARK 500 PRO B 336 -178.46 -62.20
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A1020 DISTANCE = 6.43 ANGSTROMS
REMARK 525 HOH A1021 DISTANCE = 6.58 ANGSTROMS
REMARK 525 HOH A1022 DISTANCE = 6.62 ANGSTROMS
REMARK 525 HOH A1023 DISTANCE = 7.73 ANGSTROMS
REMARK 525 HOH B 992 DISTANCE = 5.83 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 9XY A 601
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 9XY B 601
DBREF 5W9D A 306 554 UNP P03372 ESR1_HUMAN 306 554
DBREF 5W9D B 306 554 UNP P03372 ESR1_HUMAN 306 554
SEQADV 5W9D SER A 381 UNP P03372 CYS 381 ENGINEERED MUTATION
SEQADV 5W9D SER A 417 UNP P03372 CYS 417 ENGINEERED MUTATION
SEQADV 5W9D SER A 530 UNP P03372 CYS 530 ENGINEERED MUTATION
SEQADV 5W9D SER A 536 UNP P03372 LEU 536 CONFLICT
SEQADV 5W9D SER B 381 UNP P03372 CYS 381 ENGINEERED MUTATION
SEQADV 5W9D SER B 417 UNP P03372 CYS 417 ENGINEERED MUTATION
SEQADV 5W9D SER B 530 UNP P03372 CYS 530 ENGINEERED MUTATION
SEQADV 5W9D SER B 536 UNP P03372 LEU 536 CONFLICT
SEQRES 1 A 249 LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA
SEQRES 2 A 249 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR
SEQRES 3 A 249 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY
SEQRES 4 A 249 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET
SEQRES 5 A 249 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU
SEQRES 6 A 249 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP
SEQRES 7 A 249 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET
SEQRES 8 A 249 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU
SEQRES 9 A 249 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL
SEQRES 10 A 249 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE
SEQRES 11 A 249 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU
SEQRES 12 A 249 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE
SEQRES 13 A 249 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS
SEQRES 14 A 249 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE
SEQRES 15 A 249 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN
SEQRES 16 A 249 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS
SEQRES 17 A 249 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR
SEQRES 18 A 249 SER MET LYS SER LYS ASN VAL VAL PRO SER TYR ASP LEU
SEQRES 19 A 249 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO
SEQRES 20 A 249 THR SER
SEQRES 1 B 249 LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA
SEQRES 2 B 249 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR
SEQRES 3 B 249 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY
SEQRES 4 B 249 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET
SEQRES 5 B 249 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU
SEQRES 6 B 249 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP
SEQRES 7 B 249 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET
SEQRES 8 B 249 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU
SEQRES 9 B 249 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL
SEQRES 10 B 249 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE
SEQRES 11 B 249 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU
SEQRES 12 B 249 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE
SEQRES 13 B 249 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS
SEQRES 14 B 249 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE
SEQRES 15 B 249 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN
SEQRES 16 B 249 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS
SEQRES 17 B 249 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR
SEQRES 18 B 249 SER MET LYS SER LYS ASN VAL VAL PRO SER TYR ASP LEU
SEQRES 19 B 249 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO
SEQRES 20 B 249 THR SER
HET 9XY A 601 28
HET 9XY B 601 28
HETNAM 9XY ENDOXIFEN
HETSYN 9XY 4-[(1Z)-1-{4-[2-(METHYLAMINO)ETHOXY]PHENYL}-2-
HETSYN 2 9XY PHENYLBUT-1-EN-1-YL]PHENOL
FORMUL 3 9XY 2(C25 H27 N O2)
FORMUL 5 HOH *615(H2 O)
HELIX 1 AA1 THR A 311 ALA A 322 1 12
HELIX 2 AA2 ALA A 340 LYS A 362 1 23
HELIX 3 AA3 GLY A 366 LEU A 370 5 5
HELIX 4 AA4 THR A 371 SER A 395 1 25
HELIX 5 AA5 ARG A 412 LYS A 416 1 5
HELIX 6 AA6 GLU A 423 ASN A 439 1 17
HELIX 7 AA7 GLN A 441 SER A 456 1 16
HELIX 8 AA8 GLY A 457 PHE A 461 5 5
HELIX 9 AA9 THR A 465 ALA A 493 1 29
HELIX 10 AB1 THR A 496 MET A 528 1 33
HELIX 11 AB2 SER A 536 ASP A 545 1 10
HELIX 12 AB3 THR B 311 GLU B 323 1 13
HELIX 13 AB4 MET B 342 ARG B 363 1 22
HELIX 14 AB5 GLY B 366 LEU B 370 5 5
HELIX 15 AB6 THR B 371 SER B 395 1 25
HELIX 16 AB7 ARG B 412 LYS B 416 1 5
HELIX 17 AB8 GLU B 423 ASN B 439 1 17
HELIX 18 AB9 GLN B 441 SER B 456 1 16
HELIX 19 AC1 GLY B 457 PHE B 461 5 5
HELIX 20 AC2 THR B 465 ALA B 493 1 29
HELIX 21 AC3 THR B 496 MET B 528 1 33
HELIX 22 AC4 SER B 536 ASP B 545 1 10
SHEET 1 AA1 2 LYS A 401 ALA A 405 0
SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 408 N ALA A 405
SHEET 1 AA2 2 LYS B 401 ALA B 405 0
SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 408 N ALA B 405
SITE 1 AC1 14 THR A 347 ALA A 350 ASP A 351 GLU A 353
SITE 2 AC1 14 LEU A 387 ARG A 394 PHE A 404 GLU A 419
SITE 3 AC1 14 MET A 421 LEU A 428 GLY A 521 VAL A 533
SITE 4 AC1 14 HOH A 767 HOH A 831
SITE 1 AC2 17 MET B 343 LEU B 346 THR B 347 ALA B 350
SITE 2 AC2 17 ASP B 351 GLU B 353 LEU B 384 LEU B 387
SITE 3 AC2 17 ARG B 394 PHE B 404 GLU B 419 MET B 421
SITE 4 AC2 17 LEU B 428 GLY B 521 VAL B 533 HOH B 720
SITE 5 AC2 17 HOH B 789
CRYST1 57.980 57.980 277.001 90.00 90.00 120.00 P 65 12
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017247 0.009958 0.000000 0.00000
SCALE2 0.000000 0.019915 0.000000 0.00000
SCALE3 0.000000 0.000000 0.003610 0.00000