HEADER TRANSCRIPTION 23-JUN-17 5W9D TITLE ESTROGEN RECEPTOR ALPHA LIGAND BINDING DOMAIN C381S, C417S, C530S TITLE 2 MUTANT IN COMPLEX WITH ENDOXIFEN COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN RECEPTOR; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ER,ER-ALPHA,ESTRADIOL RECEPTOR,NUCLEAR RECEPTOR SUBFAMILY 3 COMPND 5 GROUP A MEMBER 1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESR1, ESR, NR3A1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BREAST CANCER, SELECTIVE ESTROGEN RECEPTOR MODULATOR, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR S.W.FANNING,G.L.GREENE REVDAT 4 04-OCT-23 5W9D 1 REMARK REVDAT 3 04-JUL-18 5W9D 1 JRNL REVDAT 2 13-JUN-18 5W9D 1 JRNL REVDAT 1 11-OCT-17 5W9D 0 JRNL AUTH P.Y.MAXIMOV,B.ABDERRAHMAN,S.W.FANNING,S.SENGUPTA,P.FAN, JRNL AUTH 2 R.F.CURPAN,D.M.Q.RINCON,J.A.GREENLAND,S.S.RAJAN,G.L.GREENE, JRNL AUTH 3 V.C.JORDAN JRNL TITL ENDOXIFEN, 4-HYDROXYTAMOXIFEN AND AN ESTROGENIC DERIVATIVE JRNL TITL 2 MODULATE ESTROGEN RECEPTOR COMPLEX MEDIATED APOPTOSIS IN JRNL TITL 3 BREAST CANCER. JRNL REF MOL. PHARMACOL. V. 94 812 2018 JRNL REFN ESSN 1521-0111 JRNL PMID 29739819 JRNL DOI 10.1124/MOL.117.111385 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 3 NUMBER OF REFLECTIONS : 56989 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.6161 - 4.4524 0.88 2667 122 0.1868 0.2346 REMARK 3 2 4.4524 - 3.5408 0.90 2728 147 0.1474 0.1408 REMARK 3 3 3.5408 - 3.0952 0.93 2806 139 0.1587 0.1951 REMARK 3 4 3.0952 - 2.8131 0.93 2836 134 0.1592 0.1800 REMARK 3 5 2.8131 - 2.6120 0.94 2789 158 0.1639 0.1979 REMARK 3 6 2.6120 - 2.4583 0.93 2818 132 0.1610 0.1589 REMARK 3 7 2.4583 - 2.3354 0.94 2776 176 0.1609 0.2037 REMARK 3 8 2.3354 - 2.2339 0.94 2796 149 0.1589 0.1624 REMARK 3 9 2.2339 - 2.1480 0.92 2753 177 0.1597 0.2050 REMARK 3 10 2.1480 - 2.0739 0.92 2764 124 0.1542 0.2031 REMARK 3 11 2.0739 - 2.0091 0.91 2752 156 0.1715 0.2256 REMARK 3 12 2.0091 - 1.9518 0.89 2690 137 0.1720 0.1996 REMARK 3 13 1.9518 - 1.9004 0.90 2696 149 0.1765 0.1984 REMARK 3 14 1.9004 - 1.8541 0.89 2668 149 0.1750 0.2428 REMARK 3 15 1.8541 - 1.8120 0.89 2651 145 0.1817 0.1985 REMARK 3 16 1.8120 - 1.7734 0.88 2695 143 0.1807 0.2255 REMARK 3 17 1.7734 - 1.7380 0.88 2644 133 0.1907 0.2091 REMARK 3 18 1.7380 - 1.7052 0.88 2605 107 0.1955 0.2617 REMARK 3 19 1.7052 - 1.6748 0.85 2586 153 0.2084 0.2631 REMARK 3 20 1.6748 - 1.6464 0.81 2419 120 0.2309 0.2836 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 4095 REMARK 3 ANGLE : 1.757 5564 REMARK 3 CHIRALITY : 0.096 652 REMARK 3 PLANARITY : 0.011 697 REMARK 3 DIHEDRAL : 14.296 1524 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 306 THROUGH 340 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5683 12.4413 -18.7879 REMARK 3 T TENSOR REMARK 3 T11: 0.1523 T22: 0.0890 REMARK 3 T33: 0.1594 T12: 0.0278 REMARK 3 T13: 0.0606 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 7.5945 L22: 1.8709 REMARK 3 L33: 2.2672 L12: 0.9518 REMARK 3 L13: 1.4790 L23: 0.3133 REMARK 3 S TENSOR REMARK 3 S11: -0.2019 S12: 0.0910 S13: -0.3658 REMARK 3 S21: -0.0393 S22: 0.0471 S23: 0.0210 REMARK 3 S31: 0.2555 S32: 0.2163 S33: 0.1058 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 341 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2314 23.0439 -15.3642 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.0860 REMARK 3 T33: 0.0976 T12: 0.0221 REMARK 3 T13: -0.0016 T23: 0.0111 REMARK 3 L TENSOR REMARK 3 L11: 2.0690 L22: 1.3574 REMARK 3 L33: 2.1271 L12: -0.5264 REMARK 3 L13: -0.0381 L23: 0.0209 REMARK 3 S TENSOR REMARK 3 S11: -0.0707 S12: -0.1623 S13: -0.0917 REMARK 3 S21: 0.1889 S22: 0.0459 S23: -0.0907 REMARK 3 S31: 0.0758 S32: 0.0862 S33: 0.0194 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 438 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4400 22.3835 -25.8811 REMARK 3 T TENSOR REMARK 3 T11: 0.0745 T22: 0.0704 REMARK 3 T33: 0.1157 T12: -0.0099 REMARK 3 T13: 0.0046 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 2.1124 L22: 1.2675 REMARK 3 L33: 3.2211 L12: 0.2403 REMARK 3 L13: -0.2943 L23: 0.1331 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.2016 S13: -0.1175 REMARK 3 S21: -0.1431 S22: -0.0500 S23: 0.0919 REMARK 3 S31: 0.0136 S32: 0.0143 S33: 0.0094 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 497 THROUGH 549 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7536 27.4329 -21.8029 REMARK 3 T TENSOR REMARK 3 T11: 0.0837 T22: 0.1653 REMARK 3 T33: 0.0731 T12: 0.0188 REMARK 3 T13: 0.0138 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 1.0164 L22: 1.2032 REMARK 3 L33: 0.9893 L12: -0.0239 REMARK 3 L13: 0.5853 L23: 0.1643 REMARK 3 S TENSOR REMARK 3 S11: 0.0045 S12: 0.5239 S13: 0.0065 REMARK 3 S21: -0.0621 S22: 0.0622 S23: -0.0985 REMARK 3 S31: 0.0807 S32: 0.1612 S33: -0.0402 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 307 THROUGH 341 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6757 53.0410 -20.3746 REMARK 3 T TENSOR REMARK 3 T11: 0.1421 T22: 0.1327 REMARK 3 T33: 0.1664 T12: 0.0426 REMARK 3 T13: -0.0442 T23: -0.0437 REMARK 3 L TENSOR REMARK 3 L11: 4.0797 L22: 4.5407 REMARK 3 L33: 2.2418 L12: 2.5951 REMARK 3 L13: -0.5229 L23: -0.4764 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.0141 S13: 0.4146 REMARK 3 S21: -0.1007 S22: -0.0464 S23: 0.3792 REMARK 3 S31: -0.3564 S32: 0.0043 S33: 0.0708 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 342 THROUGH 437 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5590 48.3131 -21.3328 REMARK 3 T TENSOR REMARK 3 T11: 0.1171 T22: 0.0731 REMARK 3 T33: 0.0880 T12: 0.0135 REMARK 3 T13: 0.0025 T23: 0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.1506 L22: 2.1848 REMARK 3 L33: 1.9999 L12: 0.1419 REMARK 3 L13: 0.0968 L23: -0.0599 REMARK 3 S TENSOR REMARK 3 S11: 0.0198 S12: 0.1329 S13: 0.1380 REMARK 3 S21: -0.2029 S22: -0.0584 S23: 0.0343 REMARK 3 S31: -0.1219 S32: -0.0160 S33: 0.0182 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 438 THROUGH 465 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6145 37.9823 -14.0139 REMARK 3 T TENSOR REMARK 3 T11: 0.0520 T22: 0.0530 REMARK 3 T33: 0.1092 T12: -0.0030 REMARK 3 T13: 0.0178 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 2.2141 L22: 2.7025 REMARK 3 L33: 6.5861 L12: 0.3472 REMARK 3 L13: 0.4008 L23: -0.2095 REMARK 3 S TENSOR REMARK 3 S11: -0.0220 S12: -0.1264 S13: 0.0135 REMARK 3 S21: 0.1162 S22: -0.0136 S23: -0.0140 REMARK 3 S31: 0.0147 S32: 0.2218 S33: -0.0231 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 466 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.1312 32.5927 -9.5188 REMARK 3 T TENSOR REMARK 3 T11: 0.0407 T22: 0.1340 REMARK 3 T33: 0.1683 T12: -0.0223 REMARK 3 T13: 0.0852 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.7537 L22: 1.9540 REMARK 3 L33: 2.9742 L12: 0.5663 REMARK 3 L13: 1.2208 L23: 0.6936 REMARK 3 S TENSOR REMARK 3 S11: -0.0093 S12: -0.1119 S13: -0.1225 REMARK 3 S21: 0.5137 S22: 0.0165 S23: 0.3297 REMARK 3 S31: -0.0118 S32: -0.2222 S33: -0.0416 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 497 THROUGH 528 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6101 36.1603 -21.7953 REMARK 3 T TENSOR REMARK 3 T11: 0.0594 T22: 0.0585 REMARK 3 T33: 0.0444 T12: 0.0274 REMARK 3 T13: 0.0100 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 7.4613 L22: 5.7544 REMARK 3 L33: 0.9770 L12: 5.5122 REMARK 3 L13: 1.1623 L23: 1.1314 REMARK 3 S TENSOR REMARK 3 S11: -0.0626 S12: 0.1183 S13: -0.0123 REMARK 3 S21: -0.1009 S22: 0.0207 S23: 0.0350 REMARK 3 S31: -0.0055 S32: -0.0276 S33: 0.0200 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 529 THROUGH 545 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6457 54.0667 -6.8672 REMARK 3 T TENSOR REMARK 3 T11: 0.4325 T22: 0.3182 REMARK 3 T33: 0.1545 T12: -0.1569 REMARK 3 T13: 0.0874 T23: -0.1058 REMARK 3 L TENSOR REMARK 3 L11: 2.3541 L22: 1.8286 REMARK 3 L33: 3.4679 L12: -0.4233 REMARK 3 L13: -2.4552 L23: -0.4465 REMARK 3 S TENSOR REMARK 3 S11: 0.2817 S12: -0.6998 S13: 0.2711 REMARK 3 S21: 0.9106 S22: -0.1698 S23: -0.2502 REMARK 3 S31: -0.1752 S32: 0.3408 S33: -0.1800 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5W9D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-JUN-17. REMARK 100 THE DEPOSITION ID IS D_1000228643. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 56989 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.646 REMARK 200 RESOLUTION RANGE LOW (A) : 19.615 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5ACC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8,000, MAGNESIUM CHLORIDE, TRIS PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 184.66733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 92.33367 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 138.50050 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 46.16683 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 230.83417 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3190 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 306 REMARK 465 PHE A 337 REMARK 465 SER A 338 REMARK 465 ALA A 551 REMARK 465 PRO A 552 REMARK 465 THR A 553 REMARK 465 SER A 554 REMARK 465 LEU B 306 REMARK 465 GLU B 339 REMARK 465 ALA B 340 REMARK 465 ALA B 546 REMARK 465 HIS B 547 REMARK 465 ARG B 548 REMARK 465 LEU B 549 REMARK 465 HIS B 550 REMARK 465 ALA B 551 REMARK 465 PRO B 552 REMARK 465 THR B 553 REMARK 465 SER B 554 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 TYR A 331 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 339 CG CD OE1 OE2 REMARK 470 ARG A 477 CZ NH1 NH2 REMARK 470 ASN A 532 CG OD1 ND2 REMARK 470 ARG B 335 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 397 CD OE1 OE2 REMARK 470 LYS B 416 CG CD CE NZ REMARK 470 LEU B 462 CG CD1 CD2 REMARK 470 SER B 463 OG REMARK 470 ARG B 477 CZ NH1 NH2 REMARK 470 ASN B 532 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 811 O HOH A 860 1.70 REMARK 500 O ALA A 307 O HOH A 701 1.73 REMARK 500 O HOH A 710 O HOH A 891 1.80 REMARK 500 O HOH A 771 O HOH A 976 1.83 REMARK 500 O HOH A 1003 O HOH A 1014 1.85 REMARK 500 O HOH B 799 O HOH B 945 1.87 REMARK 500 O HOH B 708 O HOH B 863 1.88 REMARK 500 O HOH B 930 O HOH B 990 1.89 REMARK 500 O HOH A 837 O HOH A 931 1.92 REMARK 500 O HOH B 961 O HOH B 991 1.94 REMARK 500 O HOH B 730 O HOH B 817 1.95 REMARK 500 O HOH B 729 O HOH B 885 1.96 REMARK 500 O HOH A 985 O HOH A 1017 1.96 REMARK 500 OE1 GLU B 523 O HOH B 701 1.97 REMARK 500 O GLU B 542 O HOH B 702 1.97 REMARK 500 O HOH A 740 O HOH A 915 1.97 REMARK 500 O HOH A 719 O HOH B 824 1.99 REMARK 500 O HOH B 961 O HOH B 988 1.99 REMARK 500 O HOH A 1000 O HOH A 1016 2.00 REMARK 500 O HOH A 705 O HOH A 800 2.00 REMARK 500 O HOH B 709 O HOH B 733 2.00 REMARK 500 O HOH B 822 O HOH B 918 2.01 REMARK 500 O HOH A 930 O HOH A 977 2.01 REMARK 500 O HOH A 809 O HOH A 970 2.01 REMARK 500 O HOH A 775 O HOH A 830 2.02 REMARK 500 O HOH B 888 O HOH B 936 2.03 REMARK 500 NE ARG B 477 O HOH B 703 2.03 REMARK 500 O HOH B 862 O HOH B 897 2.03 REMARK 500 O HOH B 749 O HOH B 867 2.04 REMARK 500 O HOH A 997 O HOH A 1019 2.04 REMARK 500 O HOH A 792 O HOH A 989 2.05 REMARK 500 O HOH A 736 O HOH A 767 2.06 REMARK 500 O HOH A 965 O HOH A 997 2.06 REMARK 500 O HOH B 936 O HOH B 942 2.09 REMARK 500 O HOH B 956 O HOH B 992 2.09 REMARK 500 O HOH A 725 O HOH A 913 2.10 REMARK 500 O HOH A 709 O HOH A 864 2.10 REMARK 500 O HOH A 968 O HOH B 885 2.11 REMARK 500 O HOH B 768 O HOH B 780 2.12 REMARK 500 NE ARG A 477 O HOH A 702 2.13 REMARK 500 O HOH A 705 O HOH A 785 2.13 REMARK 500 NZ LYS A 472 O HOH A 703 2.14 REMARK 500 O HOH B 907 O HOH B 948 2.14 REMARK 500 O HOH B 840 O HOH B 885 2.14 REMARK 500 O HOH B 815 O HOH B 903 2.15 REMARK 500 O PRO B 336 O HOH B 704 2.16 REMARK 500 O HOH A 971 O HOH A 1001 2.16 REMARK 500 O HOH A 954 O HOH A 1013 2.16 REMARK 500 NE ARG A 548 O HOH A 704 2.17 REMARK 500 O HOH A 907 O HOH B 965 2.18 REMARK 500 REMARK 500 THIS ENTRY HAS 53 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 940 O HOH B 714 1445 1.83 REMARK 500 O HOH A 1010 O HOH B 979 6654 1.98 REMARK 500 O HOH B 774 O HOH B 884 5455 1.98 REMARK 500 O HOH A 862 O HOH A 948 5555 2.01 REMARK 500 O HOH A 982 O HOH B 955 6654 2.02 REMARK 500 O HOH A 870 O HOH B 919 1545 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 436 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 408 75.15 -150.24 REMARK 500 PRO B 336 -178.46 -62.20 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1020 DISTANCE = 6.43 ANGSTROMS REMARK 525 HOH A1021 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH A1022 DISTANCE = 6.62 ANGSTROMS REMARK 525 HOH A1023 DISTANCE = 7.73 ANGSTROMS REMARK 525 HOH B 992 DISTANCE = 5.83 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9XY A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9XY B 601 DBREF 5W9D A 306 554 UNP P03372 ESR1_HUMAN 306 554 DBREF 5W9D B 306 554 UNP P03372 ESR1_HUMAN 306 554 SEQADV 5W9D SER A 381 UNP P03372 CYS 381 ENGINEERED MUTATION SEQADV 5W9D SER A 417 UNP P03372 CYS 417 ENGINEERED MUTATION SEQADV 5W9D SER A 530 UNP P03372 CYS 530 ENGINEERED MUTATION SEQADV 5W9D SER A 536 UNP P03372 LEU 536 CONFLICT SEQADV 5W9D SER B 381 UNP P03372 CYS 381 ENGINEERED MUTATION SEQADV 5W9D SER B 417 UNP P03372 CYS 417 ENGINEERED MUTATION SEQADV 5W9D SER B 530 UNP P03372 CYS 530 ENGINEERED MUTATION SEQADV 5W9D SER B 536 UNP P03372 LEU 536 CONFLICT SEQRES 1 A 249 LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA SEQRES 2 A 249 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR SEQRES 3 A 249 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY SEQRES 4 A 249 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET SEQRES 5 A 249 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU SEQRES 6 A 249 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP SEQRES 7 A 249 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET SEQRES 8 A 249 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU SEQRES 9 A 249 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL SEQRES 10 A 249 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE SEQRES 11 A 249 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU SEQRES 12 A 249 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE SEQRES 13 A 249 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS SEQRES 14 A 249 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE SEQRES 15 A 249 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN SEQRES 16 A 249 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS SEQRES 17 A 249 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SEQRES 18 A 249 SER MET LYS SER LYS ASN VAL VAL PRO SER TYR ASP LEU SEQRES 19 A 249 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO SEQRES 20 A 249 THR SER SEQRES 1 B 249 LEU ALA LEU SER LEU THR ALA ASP GLN MET VAL SER ALA SEQRES 2 B 249 LEU LEU ASP ALA GLU PRO PRO ILE LEU TYR SER GLU TYR SEQRES 3 B 249 ASP PRO THR ARG PRO PHE SER GLU ALA SER MET MET GLY SEQRES 4 B 249 LEU LEU THR ASN LEU ALA ASP ARG GLU LEU VAL HIS MET SEQRES 5 B 249 ILE ASN TRP ALA LYS ARG VAL PRO GLY PHE VAL ASP LEU SEQRES 6 B 249 THR LEU HIS ASP GLN VAL HIS LEU LEU GLU SER ALA TRP SEQRES 7 B 249 LEU GLU ILE LEU MET ILE GLY LEU VAL TRP ARG SER MET SEQRES 8 B 249 GLU HIS PRO GLY LYS LEU LEU PHE ALA PRO ASN LEU LEU SEQRES 9 B 249 LEU ASP ARG ASN GLN GLY LYS SER VAL GLU GLY MET VAL SEQRES 10 B 249 GLU ILE PHE ASP MET LEU LEU ALA THR SER SER ARG PHE SEQRES 11 B 249 ARG MET MET ASN LEU GLN GLY GLU GLU PHE VAL CYS LEU SEQRES 12 B 249 LYS SER ILE ILE LEU LEU ASN SER GLY VAL TYR THR PHE SEQRES 13 B 249 LEU SER SER THR LEU LYS SER LEU GLU GLU LYS ASP HIS SEQRES 14 B 249 ILE HIS ARG VAL LEU ASP LYS ILE THR ASP THR LEU ILE SEQRES 15 B 249 HIS LEU MET ALA LYS ALA GLY LEU THR LEU GLN GLN GLN SEQRES 16 B 249 HIS GLN ARG LEU ALA GLN LEU LEU LEU ILE LEU SER HIS SEQRES 17 B 249 ILE ARG HIS MET SER ASN LYS GLY MET GLU HIS LEU TYR SEQRES 18 B 249 SER MET LYS SER LYS ASN VAL VAL PRO SER TYR ASP LEU SEQRES 19 B 249 LEU LEU GLU MET LEU ASP ALA HIS ARG LEU HIS ALA PRO SEQRES 20 B 249 THR SER HET 9XY A 601 28 HET 9XY B 601 28 HETNAM 9XY ENDOXIFEN HETSYN 9XY 4-[(1Z)-1-{4-[2-(METHYLAMINO)ETHOXY]PHENYL}-2- HETSYN 2 9XY PHENYLBUT-1-EN-1-YL]PHENOL FORMUL 3 9XY 2(C25 H27 N O2) FORMUL 5 HOH *615(H2 O) HELIX 1 AA1 THR A 311 ALA A 322 1 12 HELIX 2 AA2 ALA A 340 LYS A 362 1 23 HELIX 3 AA3 GLY A 366 LEU A 370 5 5 HELIX 4 AA4 THR A 371 SER A 395 1 25 HELIX 5 AA5 ARG A 412 LYS A 416 1 5 HELIX 6 AA6 GLU A 423 ASN A 439 1 17 HELIX 7 AA7 GLN A 441 SER A 456 1 16 HELIX 8 AA8 GLY A 457 PHE A 461 5 5 HELIX 9 AA9 THR A 465 ALA A 493 1 29 HELIX 10 AB1 THR A 496 MET A 528 1 33 HELIX 11 AB2 SER A 536 ASP A 545 1 10 HELIX 12 AB3 THR B 311 GLU B 323 1 13 HELIX 13 AB4 MET B 342 ARG B 363 1 22 HELIX 14 AB5 GLY B 366 LEU B 370 5 5 HELIX 15 AB6 THR B 371 SER B 395 1 25 HELIX 16 AB7 ARG B 412 LYS B 416 1 5 HELIX 17 AB8 GLU B 423 ASN B 439 1 17 HELIX 18 AB9 GLN B 441 SER B 456 1 16 HELIX 19 AC1 GLY B 457 PHE B 461 5 5 HELIX 20 AC2 THR B 465 ALA B 493 1 29 HELIX 21 AC3 THR B 496 MET B 528 1 33 HELIX 22 AC4 SER B 536 ASP B 545 1 10 SHEET 1 AA1 2 LYS A 401 ALA A 405 0 SHEET 2 AA1 2 LEU A 408 ASP A 411 -1 O LEU A 408 N ALA A 405 SHEET 1 AA2 2 LYS B 401 ALA B 405 0 SHEET 2 AA2 2 LEU B 408 ASP B 411 -1 O LEU B 408 N ALA B 405 SITE 1 AC1 14 THR A 347 ALA A 350 ASP A 351 GLU A 353 SITE 2 AC1 14 LEU A 387 ARG A 394 PHE A 404 GLU A 419 SITE 3 AC1 14 MET A 421 LEU A 428 GLY A 521 VAL A 533 SITE 4 AC1 14 HOH A 767 HOH A 831 SITE 1 AC2 17 MET B 343 LEU B 346 THR B 347 ALA B 350 SITE 2 AC2 17 ASP B 351 GLU B 353 LEU B 384 LEU B 387 SITE 3 AC2 17 ARG B 394 PHE B 404 GLU B 419 MET B 421 SITE 4 AC2 17 LEU B 428 GLY B 521 VAL B 533 HOH B 720 SITE 5 AC2 17 HOH B 789 CRYST1 57.980 57.980 277.001 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017247 0.009958 0.000000 0.00000 SCALE2 0.000000 0.019915 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003610 0.00000